Jatropha Genome Database
- JcCA0081131.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0081131.30 - phase: 0
(299 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g032070.1 Thioredoxin fold; chr01_pseudomolecule_IMGA... 377 e-105
IMGA|Medtr5g021080.1 Thioredoxin fold; chr05_pseudomolecule_IMGA... 63 2e-10
IMGA|Medtr1g028610.1 Thioredoxin-related; Thioredoxin domain 2; ... 61 7e-10
IMGA|Medtr6g092530.1 Thioredoxin domain 2; chr06_pseudomolecule_... 60 2e-09
IMGA|Medtr4g154660.1 Thioredoxin domain 2; chr04_pseudomolecule_... 50 1e-06
IMGA|Medtr7g008470.1 Thioredoxin domain 2; Thioredoxin fold; chr... 50 2e-06
>IMGA|Medtr1g032070.1 Thioredoxin fold;
chr01_pseudomolecule_IMGAG_V3 7898114-7897032 E
EGN_Mt090430 20090702
Length = 270
Score = 377 bits (968), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/237 (76%), Positives = 203/237 (85%), Gaps = 13/237 (5%)
Query: 63 KKKPVKDERVQKIHSIEEFDEALKTAKNRLVVVEFAASNSFESSKIYPFMVDLSRTCNDV 122
+++ KD RVQ++HSIEEFDEAL++AK++LVVVE+A S+ ES +IYPF+VDLSRTCNDV
Sbjct: 47 RRQEKKDARVQRVHSIEEFDEALESAKDKLVVVEYATSDDSESIEIYPFLVDLSRTCNDV 106
Query: 123 DFLLVMGDESEKTKQLCKRENIEKVPHFSFYKGMEKIHEEEGIGPDRLMGDVLYYGDNHS 182
+FLLVMGDESEKTK+LCKRE ++KVPHF+FYK EKIHEEE IGPD L+GDVLYYGDNHS
Sbjct: 107 EFLLVMGDESEKTKELCKREKVDKVPHFTFYKSKEKIHEEEAIGPDMLVGDVLYYGDNHS 166
Query: 183 AVVQLHCREDVEKLIGDHKADKKLIVLDVGLKHCGPCVKVYPTVVKLSRQMADTAVFARM 242
VVQLH REDVEKLI DHK D KLIVLDVGLKHCGPCVKVYPTV+KLSRQM DT +FARM
Sbjct: 167 GVVQLHNREDVEKLIEDHKIDHKLIVLDVGLKHCGPCVKVYPTVIKLSRQMNDTVIFARM 226
Query: 243 NGDENDSCMQFLRDMNVVEVPTFLFIREGKICGRYVGSGKGELIGEILRYQGVRVTY 299
NGDENDSCMQFLRDM V I GRYVGSGKGELIGEILRYQGVRVTY
Sbjct: 227 NGDENDSCMQFLRDMEV-------------IAGRYVGSGKGELIGEILRYQGVRVTY 270
>IMGA|Medtr5g021080.1 Thioredoxin fold;
chr05_pseudomolecule_IMGAG_V3 7995747-7998123 E
EGN_Mt090430 20090702
Length = 120
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 4/109 (3%)
Query: 184 VVQLHCREDVEKLIGDHKADKKLIVLDVGLKHCGPCVKVYPTVVKLSRQMADTAVFARMN 243
V+ +H + ++ KKLIV+D CGPC + P + +L+++ + A+F +++
Sbjct: 10 VIGVHNVDAWNDILHRGNESKKLIVVDFTASWCGPCRFIAPFLAELAKKYTN-AIFLKVD 68
Query: 244 GDENDSCMQFLRDMNVVEVPTFLFIREGKICGRYVGSGKGELIGEILRY 292
DE S Q D + +PTF+F++EG I G+ VG+ K EL I ++
Sbjct: 69 VDELKSVAQ---DWAIEAMPTFVFVKEGTILGKVVGAKKDELTQTIEKH 114
>IMGA|Medtr1g028610.1 Thioredoxin-related; Thioredoxin domain 2;
chr01_pseudomolecule_IMGAG_V3 7031623-7033748 E
EGN_Mt090430 20090702
Length = 120
Score = 60.8 bits (146), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 64/115 (55%), Gaps = 4/115 (3%)
Query: 184 VVQLHCREDVEKLIGDHKADKKLIVLDVGLKHCGPCVKVYPTVVKLSRQMADTAVFARMN 243
V+ +H E ++ I KKLIV+D CGPC + P + ++++++ + +F +++
Sbjct: 8 VIGVHTVEQWKEEIQKGNDSKKLIVVDFTASWCGPCRFIAPILAEIAKKIPEV-IFLKVD 66
Query: 244 GDENDSCMQFLRDMNVVEVPTFLFIREGKICGRYVGSGKGELIGEILRYQGVRVT 298
DE S ++ +V +PTFLF++EGK + VG+ K EL I +++ V
Sbjct: 67 IDEVKSVA---KEWSVEAMPTFLFLKEGKEVDKVVGARKEELENAITKHKDATVA 118
>IMGA|Medtr6g092530.1 Thioredoxin domain 2;
chr06_pseudomolecule_IMGAG_V3 19465858-19469826 E
EGN_Mt090430 20090702
Length = 214
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Query: 34 FASKHKPLATKLYPNRTNFTVKATASPDTKKKPVKDERVQKIHSIEEFDEALKTAKNRLV 93
F+ P L P + TV T P +K + + IHS +EF AL A++RLV
Sbjct: 41 FSLPSPPRRKHLLPFKVCATVAETGQPKWWEKNASN--MIDIHSTQEFLNALSQAEDRLV 98
Query: 94 VVEFAASNSFESSKIYPFMVDLSRTCNDVDFLLVMGDESEKTKQLCKRENIEKVPHFSFY 153
+VEF + ++P + + ++ FL V DE+ K +CK N++ +P+F FY
Sbjct: 99 IVEFYGTWCASCRALFPKLCRTAEEHPEIIFLKVNFDEN---KPMCKSLNVKVLPYFHFY 155
Query: 154 KGME 157
+G E
Sbjct: 156 RGAE 159
>IMGA|Medtr4g154660.1 Thioredoxin domain 2;
chr04_pseudomolecule_IMGAG_V3 38026185-38029591 F
EGN_Mt090430 20090702
Length = 364
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 9/151 (5%)
Query: 149 HFSFYKGMEKIHEEEGIGPDRLMGDVLYYGDNHSA-----VVQLHCREDVEKLIGDHKAD 203
H Y+ + K E++ P + + D SA V+ +H ++E +
Sbjct: 216 HRKKYERLRKQKEQKRAQPKKQPQNQAQDKDALSALKDGQVIGVHSVGELETKLSAASKT 275
Query: 204 KKLIVLDVGLKHCGPCVKVYPTVVKLSRQMADTAVFARMNGDENDSCMQFLRDMNVVEVP 263
+L+VL CGPC + P L+ + VF +++ DE + NV VP
Sbjct: 276 SRLLVLYFTATWCGPCRYISPLYTSLAEKY-QRVVFLKVDIDE---AVDVAARWNVSSVP 331
Query: 264 TFLFIREGKICGRYVGSGKGELIGEILRYQG 294
TF F++ GK VG+ K L +I ++ G
Sbjct: 332 TFFFVKNGKEVDSVVGADKNTLERKIAQHSG 362
>IMGA|Medtr7g008470.1 Thioredoxin domain 2; Thioredoxin fold;
chr07_pseudomolecule_IMGAG_V3 1263803-1262352 F
EGN_Mt090430 20090702
Length = 134
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 12/113 (10%)
Query: 182 SAVVQLHCREDVEKLIGDHKADKKLIVLDVGLKHCGPCVKVYPTVVKLSRQMADTAVFAR 241
SA QLH E K +L+V+D CGPC + P + ++ + D F +
Sbjct: 34 SARWQLHFNE--------LKDSPRLVVIDFSATWCGPCKMMEPILQAMANEFTDVE-FIK 84
Query: 242 MNGDENDSCMQFLRDMNVVEVPTFLFIREGKICGRYVGSGKGELIGEILRYQG 294
++ DE Q + V +PTFL ++ GK + VG+ K EL ++ +++
Sbjct: 85 IDVDELSDVAQ---EFKVQAMPTFLLLKNGKEVDKVVGAKKDELKNKVQKHKA 134