Jatropha Genome Database

JcCA0081131.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0081131.20 + phase: 0 
         (253 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g032050.1 Uncharacterized protein At1g76070, related ...   190   7e-49
IMGA|Medtr3g157310.1 Uncharacterized protein At1g76070, related ...   179   2e-45
IMGA|Medtr8g088960.1 syringolide-induced protein 14-1-1, related...    74   1e-13
IMGA|Medtr5g023010.1 syringolide-induced protein 14-1-1, related...    64   6e-11

>IMGA|Medtr1g032050.1 Uncharacterized protein At1g76070, related
           chr01_pseudomolecule_IMGAG_V3 7890853-7891883 F
           EGN_Mt090430 20090702
          Length = 247

 Score =  190 bits (482), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/260 (46%), Positives = 155/260 (59%), Gaps = 36/260 (13%)

Query: 2   EKQPKSKNNILKFLPKAASAVYFHNPPFSPNRD---RRSDNNYCHRLKAH-VGKGFSGPF 57
           +KQ K +N  +K     A  + F N PFSP RD   R  ++N     K H VGKGFSGP 
Sbjct: 4   DKQSKLRNKFMK-----AITITFQNAPFSPGRDHKFRSENSNTKWGAKTHAVGKGFSGPM 58

Query: 58  VSMIPDEVRRKPKNGSF-ETQEPTSPKVSCIGQIKHKKKMVNKTKRTSPPKEIKAVSSPR 116
           V+MIP E RRKPK+G   ETQEPTSPK+SC+GQIKH KK                + +P+
Sbjct: 59  VTMIPYEARRKPKDGGGNETQEPTSPKISCMGQIKHHKKKNIPKPNKD-------LFTPK 111

Query: 117 -DVKKHASKFKRLFSISAKPT-AGRRSDASIYDRPPLSDRAPSLGQMKRFASGRDTFSNF 174
            D +   SKF+R+FS  +K   A R+SD S +     +++AP +G M+RFASGR+ FS F
Sbjct: 112 VDTEVKRSKFQRIFSQRSKAKFAERKSDGSGF-VDEGNNKAPPMGDMRRFASGREAFSKF 170

Query: 175 DWTAQITPVESDHRDYSSDEDDRMYCHQGEEDEVIIPFSAPMLIGSGAA-------LQPR 227
           DW A I P E D R+  +D         GE+DE++IPFSAP+L   G          +PR
Sbjct: 171 DWKAVIEPEEIDQRECFTD---------GEDDEILIPFSAPILGVGGNTTGTSDFKFKPR 221

Query: 228 KEVNLWKRRTMNPPKPLQLN 247
            E+NLWKRRTM PP+PLQLN
Sbjct: 222 NEINLWKRRTMAPPRPLQLN 241


>IMGA|Medtr3g157310.1 Uncharacterized protein At1g76070, related
           chr03_pseudomolecule_IMGAG_V3 41456706-41457904 E
           EGN_Mt090430 20090702
          Length = 245

 Score =  179 bits (453), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/258 (48%), Positives = 161/258 (62%), Gaps = 27/258 (10%)

Query: 1   MEKQPKSKNNILKFLPKAASAVYFHNPPFSPNRDRRS-DNNYCHRLKAHVGKGFSGPFVS 59
           MEK  K +N ILK LPK  + + F N PFSP RD +S  +N     + H  KGFSGP  S
Sbjct: 1   MEKNLKLRNKILKILPKTIT-INFQNHPFSPGRDHKSRQDNATKWARPHGVKGFSGPIQS 59

Query: 60  MIPDEVRRKPKN-GSFETQEPTSPKVSCIGQIKHKKKMVNKTKRTSPPKEIKAVSSPRDV 118
           +IP E RRK K+    + +EPTSPK+SC+GQIKHKKK + K+K               +V
Sbjct: 60  IIPREARRKSKDINGIDYEEPTSPKISCMGQIKHKKKQIKKSKDM-------------EV 106

Query: 119 KKHASKF-KRLFSISAKPTAGRR-SDA-SIYDRP-PLSDRAPSLGQMKRFASGRDTFSNF 174
           KKH + F K LF +    + GRR SDA ++ D+   + +RA  + QMKRFASGRDTF+NF
Sbjct: 107 KKHVNTFQKMLFHVGKPKSEGRRKSDACAVQDKKYAIEERATHVSQMKRFASGRDTFANF 166

Query: 175 DWTAQITPVESDHRDYSSDEDDRMYCHQGEEDEVIIPFSAPMLIGSGAA-----LQPRKE 229
           DW AQ+ P E D  +Y SDE+        +E+E  IPFSAP+  G GA      L+PRKE
Sbjct: 167 DWKAQVAPEEID--NYYSDEERMQSDDDDDEEEFKIPFSAPLGGGVGACSLGLDLKPRKE 224

Query: 230 VNLWKRRTMNPPKPLQLN 247
           +NLWKRRTM PP+PLQL+
Sbjct: 225 INLWKRRTMAPPRPLQLD 242


>IMGA|Medtr8g088960.1 syringolide-induced protein 14-1-1, related
           chr08_pseudomolecule_IMGAG_V3 19015748-19016215 H
           EGN_Mt090430 20090702
          Length = 155

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 84/180 (46%), Gaps = 32/180 (17%)

Query: 1   MEKQPKSKNNILKFLPK--AASAVYFHNPPFSPNRDRRSDNNYCHRLKAHVGKGFSGPFV 58
           MEK  K KN   KFLPK   AS   + NP  SPN    +                    V
Sbjct: 1   MEKLSKMKNKFFKFLPKRPVASVSSYQNPTLSPNASVTTARK-----------------V 43

Query: 59  SMIPDEVRRKPKNGSFETQEPTSPKVSCIGQIKHKKKMVNKTK-RTSPPKEIKAVSSPRD 117
           S+IP E RRK ++ SF  +EP+SPKVSC+GQ+K KKK     +   S  K   +V+S  +
Sbjct: 44  SIIPKEARRKHRSISFSAREPSSPKVSCMGQVKSKKKKRKAKRIHQSSTKNNDSVTSHEN 103

Query: 118 VKKHASKFKRLFSISAKPTAGRRSDASIYDRPPLSDRAPSLGQMKRFASGRDTFSNFDWT 177
                   K++   S K      +     +  P     PSLG MK+F SGR + S+FD T
Sbjct: 104 --------KKILLQSEKALVVEENQ----EFAPSMLIVPSLGTMKKFESGRGSLSDFDAT 151


>IMGA|Medtr5g023010.1 syringolide-induced protein 14-1-1, related
           chr05_pseudomolecule_IMGAG_V3 9002516-9003098 E
           EGN_Mt090430 20090702
          Length = 153

 Score = 63.9 bits (154), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 66/180 (36%), Positives = 83/180 (46%), Gaps = 34/180 (18%)

Query: 1   MEKQPKSKNNILKFLPKA--ASAVYFHNPPFSPNRDRRSDNNYCHRLKAHVGKGFSGPFV 58
           MEK  K K   LKFL K    S   + NP  SP          C     HV         
Sbjct: 1   MEKLFKIKTTFLKFLSKQPPVSLAGYQNPTLSP----------CRSPTTHV--------- 41

Query: 59  SMIPDEVRRKPKNG-SFETQEPTSPKVSCIGQIKHKKKMVNKTKRTSPPKEIKAVSSPRD 117
           S+ P E RRK K G SF  +EPTSPKVSC+G+IK KKK   K K+    K I+ V   ++
Sbjct: 42  SLFPKEARRKHKRGISFSPKEPTSPKVSCMGEIKSKKKKKKKEKKLH--KGIQNVVPNKN 99

Query: 118 VKKHASKFKRLFSISAKPTAGRRSDASIYDRPPLSDRAPSLGQMKRFASGRDTFSNFDWT 177
           V    SK     S       G+  +++I   P      P+L  MK+F SGR +  +FD T
Sbjct: 100 VLLWISK----GSYEGGRQGGKEKESAIVSVP------PTLNSMKKFTSGRGSLCDFDAT 149