Jatropha Genome Database

JcCA0080591.20

BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080591.20 + phase: 0 
         (440 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g077950.1 Contains a PF|01464 Transglycosylase SLT do...   100   2e-21

>IMGA|Medtr2g077950.1 Contains a PF|01464 Transglycosylase SLT
          domain., putative chr02_pseudomolecule_IMGAG_V3
          18089833-18086780 E EGN_Mt090430 20090702
          Length = 66

 Score =  100 bits (248), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 42/61 (68%), Positives = 50/61 (81%)

Query: 1  MGISFKYWDECVEPQDMEAMWREPEVLTEWLDAGETKGQKVHLSRDPDGQPYLTQTEMKA 60
          M  +F YWD+CV+PQD+EAMW  PEV  EWL  GE +G+KVHLSRDPDGQPYLTQTEM+ 
Sbjct: 1  MAANFSYWDDCVDPQDLEAMWNVPEVSAEWLKVGEERGRKVHLSRDPDGQPYLTQTEMRV 60

Query: 61 V 61
          +
Sbjct: 61 L 61



 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)

Query: 236 GGDYVYWDSRASPEDMQEMWNNSDVAREWIKSGEKRG-KVRFSLDKDKRLYLSRVEVKI 293
             ++ YWD    P+D++ MWN  +V+ EW+K GE+RG KV  S D D + YL++ E+++
Sbjct: 2   AANFSYWDDCVDPQDLEAMWNVPEVSAEWLKVGEERGRKVHLSRDPDGQPYLTQTEMRV 60