Jatropha Genome Database

JcCA0080591.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0080591.10 - phase: 0 
         (243 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   317   4e-87
IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, t...   253   8e-68
IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   214   4e-56
IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   206   6e-54
IMGA|Medtr3g160060.1 Protein of unknown function CP12; Glycerald...   138   2e-33
IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, t...   136   1e-32

>IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
           EGN_Mt090430 20090702
          Length = 418

 Score =  317 bits (811), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 153/243 (62%), Positives = 177/243 (72%)

Query: 1   MAFSSLLRSTTAAPXXXXXXXXXXXXXXXRFKDLKSSKSIFXXXXXXXXXXXQACCTRSF 60
           MA SSLLRS   +                  K  +   +IF           Q C  RS 
Sbjct: 1   MAASSLLRSAIVSSPSSDRFQVLGNGSSISSKSTRLQNNIFGTSIPCDSLVLQNCNARSM 60

Query: 61  QPIKATATEMPPTILKSRNDGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTK 120
           QPI+ATATE+P  +  S + GKT++GINGFGRIGRLV+R+ATFRDDIDVVA+NDPFID K
Sbjct: 61  QPIRATATEIPLPVQNSSSTGKTRVGINGFGRIGRLVLRVATFRDDIDVVAINDPFIDAK 120

Query: 121 YMAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSG 180
           YMAYMFKYDSTHG +KG+IKVLDESTLEINGKQ+KV SKRDP EIPWGD+GA+YV+ESSG
Sbjct: 121 YMAYMFKYDSTHGPFKGTIKVLDESTLEINGKQVKVVSKRDPVEIPWGDFGADYVIESSG 180

Query: 181 VFTTIDXXXXXXXXXXXXVVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPL 240
           +FTT++            ++ISAPSADAPMFVVGVNEKTY  NMD+VSNASCTTNCLAPL
Sbjct: 181 IFTTLEKASSHLKAGAKKIIISAPSADAPMFVVGVNEKTYNSNMDIVSNASCTTNCLAPL 240

Query: 241 AKV 243
           AKV
Sbjct: 241 AKV 243


>IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
           EGN_Mt090430 20090702
          Length = 392

 Score =  253 bits (645), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 131/243 (53%), Positives = 152/243 (62%), Gaps = 26/243 (10%)

Query: 1   MAFSSLLRSTTAAPXXXXXXXXXXXXXXXRFKDLKSSKSIFXXXXXXXXXXXQACCTRSF 60
           MA SSLLRS   +                  K  +   +IF           Q C  RS 
Sbjct: 1   MAASSLLRSAIVSSPSSDRFQVLGNGSSISSKSTRLQNNIFGTSIPCDSLVLQNCNARSM 60

Query: 61  QPIKATATEMPPTILKSRNDGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTK 120
           QPI+ATATE+P  +  S + GKT++GINGFGRIGRL                        
Sbjct: 61  QPIRATATEIPLPVQNSSSTGKTRVGINGFGRIGRL------------------------ 96

Query: 121 YMAYMFKYDSTHGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSG 180
             AYMFKYDSTHG +KG+IKVLDESTLEINGKQ+KV SKRDP EIPWGD+GA+YV+ESSG
Sbjct: 97  --AYMFKYDSTHGPFKGTIKVLDESTLEINGKQVKVVSKRDPVEIPWGDFGADYVIESSG 154

Query: 181 VFTTIDXXXXXXXXXXXXVVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPL 240
           +FTT++            ++ISAPSADAPMFVVGVNEKTY  NMD+VSNASCTTNCLAPL
Sbjct: 155 IFTTLEKASSHLKAGAKKIIISAPSADAPMFVVGVNEKTYNSNMDIVSNASCTTNCLAPL 214

Query: 241 AKV 243
           AKV
Sbjct: 215 AKV 217


>IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr03_pseudomolecule_IMGAG_V3 25359130-25364058 E
           EGN_Mt090430 20090702
          Length = 340

 Score =  214 bits (544), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 102/166 (61%), Positives = 123/166 (74%), Gaps = 1/166 (0%)

Query: 79  NDGKTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTKYMAYMFKYDSTHGGYKG- 137
           +D K +IGINGFGRIGRLV R+A  R+D+++VA+NDPFI T YM YMFKYD+ HG +K  
Sbjct: 3   SDKKIRIGINGFGRIGRLVARVALQRNDVELVAINDPFITTDYMTYMFKYDTVHGQWKHF 62

Query: 138 SIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXXXXXX 197
            +KV D  TL    K++ V   R+P EIPWG+ GA+YV+ES+GVFT  D           
Sbjct: 63  ELKVKDTKTLLFGEKEVAVFGTRNPEEIPWGEVGADYVIESTGVFTDKDKAAAHLKGGAK 122

Query: 198 XVVISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
            VVISAPS DAPMFVVGVNEK YKP +++VSNASCTTNCLAPLAKV
Sbjct: 123 KVVISAPSKDAPMFVVGVNEKEYKPELNIVSNASCTTNCLAPLAKV 168


>IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr08_pseudomolecule_IMGAG_V3 24655871-24652454 F
           EGN_Mt090430 20090702
          Length = 339

 Score =  206 bits (525), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 101/163 (61%), Positives = 116/163 (71%), Gaps = 1/163 (0%)

Query: 82  KTKIGINGFGRIGRLVMRIATFRDDIDVVAVNDPFIDTKYMAYMFKYDSTHGGYKG-SIK 140
           K KIGINGFGRIGRLV R+A  RDD+++VAVNDPFI T YM YMFKYDS HG +K   + 
Sbjct: 5   KIKIGINGFGRIGRLVARVALKRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKNDELT 64

Query: 141 VLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXXXXXXXVV 200
           V D  TL    K + V + R+P EIPW   GA+ +VES+GVFT  D            V+
Sbjct: 65  VKDSKTLLFGEKPVTVFAHRNPEEIPWASTGADIIVESTGVFTDKDKAAAHLKGGAKKVI 124

Query: 201 ISAPSADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
           ISAPS DAPMFVVGVNEK YKP  D++SNASCTTNCLAPLAKV
Sbjct: 125 ISAPSKDAPMFVVGVNEKEYKPEFDIISNASCTTNCLAPLAKV 167


>IMGA|Medtr3g160060.1 Protein of unknown function CP12;
           Glyceraldehyde-3-phosphate dehydrogenase, type I
           chr03_pseudomolecule_IMGAG_V3 42055909-42059863 F
           EGN_Mt090430 20090702
          Length = 451

 Score =  138 bits (348), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 105/176 (59%), Gaps = 6/176 (3%)

Query: 73  TILKSRNDGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPFIDTKYMAYMFKYDS 130
           T ++     K K+ INGFGRIGR  +R    R D  ++V+ VND     K  +++ KYDS
Sbjct: 76  TAVRGETVAKLKVAINGFGRIGRNFLRCWHGRKDSPLEVIVVNDSG-GVKNASHLLKYDS 134

Query: 131 THGGYKGSIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXX 190
             G +K  +K+L+  T+ ++GK I V S RDP ++PW + G + V+E +GVF        
Sbjct: 135 MLGTFKADVKILNNETITVDGKPILVVSSRDPLKLPWAELGIDIVIEGTGVFVDGPGAGK 194

Query: 191 XXXXXXXXVVISAPS--ADAPMFVVGVNEKTYKPNM-DVVSNASCTTNCLAPLAKV 243
                   V+I+AP+  AD P +VVGVNE+ Y   + D++SNASCTTNCLAP  K+
Sbjct: 195 HIQAGAKKVIITAPAKGADIPTYVVGVNEQDYGHEVADIISNASCTTNCLAPFVKI 250


>IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, type
           I chr07_pseudomolecule_IMGAG_V3 22250718-22247269 F
           EGN_Mt090430 20090702
          Length = 404

 Score =  136 bits (342), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/167 (43%), Positives = 99/167 (59%), Gaps = 4/167 (2%)

Query: 80  DGKTKIGINGFGRIGRLVMRIATFRDD--IDVVAVNDPFIDTKYMAYMFKYDSTHGGYKG 137
           + K K+ INGFGRIGR  +R    R D  +DV+A+ND     K  +++ KYDST G +  
Sbjct: 67  EAKIKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDTG-GVKQASHLLKYDSTLGIFDA 125

Query: 138 SIKVLDESTLEINGKQIKVSSKRDPAEIPWGDYGAEYVVESSGVFTTIDXXXXXXXXXXX 197
            +K +    + ++GK IKV S R+PA +PWG+ G + V+E +GVF   +           
Sbjct: 126 DVKPVGTDGISVDGKVIKVVSDRNPANLPWGELGIDLVIEGTGVFVDREGAGKHITAGAK 185

Query: 198 XVVISAPS-ADAPMFVVGVNEKTYKPNMDVVSNASCTTNCLAPLAKV 243
            V+I+AP   D P +VVGVN   Y    D++SNASCTTNCLAP  KV
Sbjct: 186 KVLITAPGKGDIPTYVVGVNADGYSHADDIISNASCTTNCLAPFVKV 232