Jatropha Genome Database
- JcCA0079611.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0079611.20 + phase: 0 /partial
(392 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr7g012510.1 Alpha amylase, catalytic region; Alpha-amyl... 402 e-112
IMGA|Medtr1g024370.1 Alpha amylase, catalytic subdomain; Alpha-a... 374 e-104
IMGA|Medtr1g024420.1 Alpha amylase, catalytic subdomain; Alpha-a... 282 2e-76
IMGA|Medtr1g024370.2 Alpha amylase, catalytic subdomain; Alpha-a... 251 3e-67
IMGA|Medtr1g032120.1 Alpha amylase, catalytic region chr01_pseud... 229 2e-60
IMGA|Medtr3g083110.1 Glycine hydroxymethyltransferase; ; chr03_p... 108 6e-24
IMGA|Medtr1g032110.1 Alpha amylase, catalytic region chr01_pseud... 82 4e-16
IMGA|Medtr2g049210.1 alpha-amylase 2, putative chr02_pseudomolec... 51 1e-06
IMGA|Medtr7g076100.1 Glycine hydroxymethyltransferase; chr07_pse... 50 2e-06
>IMGA|Medtr7g012510.1 Alpha amylase, catalytic region; Alpha-amylase
beta-sheet, C-terminal chr07_pseudomolecule_IMGAG_V3
3265803-3252876 H EGN_Mt090430 20090702
Length = 1087
Score = 402 bits (1034), Expect = e-112, Method: Compositional matrix adjust.
Identities = 191/264 (72%), Positives = 216/264 (81%), Gaps = 7/264 (2%)
Query: 1 FQGFNWESWRRRWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYGT 60
FQ FNWESWRR+WY ELA KAADL + GVTAVW PPPTESVA QGYMPSDLYNLNS+YG+
Sbjct: 571 FQAFNWESWRRQWYQELASKAADLSKCGVTAVWLPPPTESVAAQGYMPSDLYNLNSSYGS 630
Query: 61 EEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGGKISWGPEAIVCDDPNFQ 120
EELKYCIEE+H+HDLLALGDVVLNHRCA KQSPNGVWNIFGGK++WGPEAIVCDDP+FQ
Sbjct: 631 VEELKYCIEELHTHDLLALGDVVLNHRCAHKQSPNGVWNIFGGKLAWGPEAIVCDDPHFQ 690
Query: 121 GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFKEY 180
GRGNPSSGDIFHAAPNIDHSQ+FVRKDIK WLNWLRS I FDGWRLDFV+GFSGTY KEY
Sbjct: 691 GRGNPSSGDIFHAAPNIDHSQEFVRKDIKEWLNWLRSDIGFDGWRLDFVKGFSGTYVKEY 750
Query: 181 IEASDPAFAIGEYWDSLAYENGSLCYNQ--DAHRQRIVNWINATGGTSSAFDVTTK--GI 236
IEAS+P FAIGEYWDSL+YE+GSLCYNQ +R+ + I + F + GI
Sbjct: 751 IEASNPVFAIGEYWDSLSYEHGSLCYNQVTKLKHKRLKDRIAGIAQFHADFTYSCDFPGI 810
Query: 237 LHSALHNQYWRLIDPQGKPTGVMG 260
L L++ ++ + G GV+G
Sbjct: 811 L---LNSGFYSRSESIGASLGVLG 831
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 168/184 (91%), Positives = 178/184 (96%)
Query: 209 DAHRQRIVNWINATGGTSSAFDVTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVT 268
DAHRQRIVNWINATGGTSSAFD+TTKGILHSALHN+YWR+IDPQGKPTGVMGWWPSRAVT
Sbjct: 904 DAHRQRIVNWINATGGTSSAFDITTKGILHSALHNEYWRMIDPQGKPTGVMGWWPSRAVT 963
Query: 269 FLENHDTGSTQGHWPFPRDKLMQGYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKR 328
FLENHDTGSTQGHWPFPRDKLMQGYAYILTHPGTP IFYDHFYDFGI DVITEL+EAR+R
Sbjct: 964 FLENHDTGSTQGHWPFPRDKLMQGYAYILTHPGTPVIFYDHFYDFGIHDVITELIEARRR 1023
Query: 329 ADIHCRSSVKIYHANNEGYVAQIGDTLVMKLGHFDWNPSKEINLDGSWQKFVDKGSDYQV 388
A IHCRSS+KIY+ANNEGYVAQ+GD+LVMKLG FDWNPSKE L+GSWQKFVDKGSDYQV
Sbjct: 1024 AGIHCRSSIKIYNANNEGYVAQVGDSLVMKLGQFDWNPSKENRLEGSWQKFVDKGSDYQV 1083
Query: 389 WLRQ 392
WLRQ
Sbjct: 1084 WLRQ 1087
>IMGA|Medtr1g024370.1 Alpha amylase, catalytic subdomain;
Alpha-amylase beta-sheet, C-terminal;
chr01_pseudomolecule_IMGAG_V3 5777523-5780031 E
EGN_Mt090430 20090702
Length = 421
Score = 374 bits (961), Expect = e-104, Method: Compositional matrix adjust.
Identities = 188/399 (47%), Positives = 262/399 (65%), Gaps = 15/399 (3%)
Query: 1 FQGFNWESWRRR-WYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLN-SAY 58
FQGFNWES + WY L DL +G+T VW PPP++SV PQGY+P LY+L+ S Y
Sbjct: 27 FQGFNWESSNKGGWYNSLKNLIPDLANAGITHVWLPPPSQSVGPQGYLPGRLYDLDASKY 86
Query: 59 GTEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG-----KISWGPEAIV 113
G++++LK I + L D+V+NHR A+++ G++ +F G K+ WGP I
Sbjct: 87 GSKDDLKSLIAAFKDKGINCLADIVINHRTAERKDDRGIYCLFEGGTPDSKLDWGPSFIC 146
Query: 114 CDDPNFQ-GRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGF 172
DD + G GN SG+ + AAP+IDH V+K++ W+NWL++ I F GWR DFV+G+
Sbjct: 147 KDDTAYSDGTGNLDSGEGYQAAPDIDHLNPQVQKELSEWMNWLKTEIGFSGWRFDFVKGY 206
Query: 173 SGTYFKEYIEASDPAFAIGEYWDSLAY-ENGSLCYNQDAHRQRIVNWINATGGTSSAFDV 231
+ + K Y+E + P FA+GEYW+SL+Y ++G L YNQDA R +VNW+ GG +AFD
Sbjct: 207 APSITKIYMENTSPDFAVGEYWNSLSYGQDGKLNYNQDAARGELVNWVENGGGVVNAFDF 266
Query: 232 TTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLMQ 291
TTKGIL +A+ + WRL D GKP G++G P TF++NHDTGSTQ WPFP DK+MQ
Sbjct: 267 TTKGILQAAVQGELWRLKDSNGKPPGLIGIKPENGATFIDNHDTGSTQKLWPFPSDKVMQ 326
Query: 292 GYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQI 351
GYAYILTHPGTP+IFYDHF+D+G++D I +L R+R I+ +S+V I A+ + YVA+I
Sbjct: 327 GYAYILTHPGTPSIFYDHFFDWGLKDQIAKLTAIRQRNGINMKSTVNILAADADLYVAKI 386
Query: 352 GDTLVMKLGHFDWNPSKEI-NLDGSWQKFVDKGSDYQVW 389
+ +++K+G P ++ NL S G DY VW
Sbjct: 387 DNKIIVKIG-----PRMDLGNLIPSNFHVATSGQDYAVW 420
>IMGA|Medtr1g024420.1 Alpha amylase, catalytic subdomain;
Alpha-amylase beta-sheet, C-terminal;
chr01_pseudomolecule_IMGAG_V3 5791628-5793616 H
EGN_Mt090430 20090702
Length = 402
Score = 282 bits (722), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 155/400 (38%), Positives = 226/400 (56%), Gaps = 38/400 (9%)
Query: 1 FQGFNWESWRRR--WYVELAPKAADLYQSGVTAVWFPPPTES--VAPQGYMPSDLYNLN- 55
FQGF W S + W+ L K D+ +GV VW PPP+ S PQGY+P LY+L+
Sbjct: 27 FQGFKWASSEKEGGWWNFLKTKVPDIADAGVEYVWLPPPSNSHDDGPQGYLPKRLYDLDT 86
Query: 56 SAYGTEEELKYCIEEMHSHDLLALGDVVLNHRCAQKQSPNGVWNIFGG----KISWGPEA 111
S YG ++ELK + + ++ D+V+NHR A++ NG+ GG ++ W
Sbjct: 87 SKYGNKQELKSLVAAFREQGVKSISDIVINHRTAERLDNNGLSIFEGGTPDNRLDWDVSY 146
Query: 112 IVCDDPNFQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRG 171
I +D F+G GN +GD + AP++DH+ V++++ W+NW
Sbjct: 147 ICGNDVQFKGTGNNDTGDDWGGAPDVDHTNPKVQQELSDWMNW----------------- 189
Query: 172 FSGTYFKEYIEASDPAFAIGEYWDSLAY-ENGSLCYNQDAHRQRIVNWINATGGTSSAFD 230
+ K Y+E + P F +GE + ++ +G NQD HR+ +V W+N GG + FD
Sbjct: 190 ----FTKNYVEKTSPDFTVGELYRNVELGSDGKPLANQDKHRETLVKWVNDAGGVVTTFD 245
Query: 231 VTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDTGSTQGHWPFPRDKLM 290
TTK IL +A+ + WR+ D GKP G++G PS AVTF++NHDTGS Q WPFP DK+M
Sbjct: 246 FTTKMILGAAVQGELWRMKDANGKPPGMIGIMPSNAVTFVDNHDTGS-QKLWPFPDDKVM 304
Query: 291 QGYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKRADIHCRSSVKIYHANNEGYVAQ 350
GY YILTHPG PTIFYDH+ ++G+ + I +L RKR I S+V I A N+ Y+A
Sbjct: 305 LGYVYILTHPGHPTIFYDHYIEWGLMEPIKKLTAIRKRNGITATSNVNILAAENDLYMAN 364
Query: 351 IGDTLVMKLGHFDWNPSKEI-NLDGSWQKFVDKGSDYQVW 389
IG+ +++K+G P ++ NL + G DY VW
Sbjct: 365 IGNKIIVKIG-----PKLDLGNLLPPNAQVATSGQDYAVW 399
>IMGA|Medtr1g024370.2 Alpha amylase, catalytic subdomain;
Alpha-amylase beta-sheet, C-terminal;
chr01_pseudomolecule_IMGAG_V3 5777523-5780031 E
EGN_Mt090430 20090702
Length = 236
Score = 251 bits (642), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 121/240 (50%), Positives = 166/240 (69%), Gaps = 7/240 (2%)
Query: 152 LNWLRSHICFDGWRLDFVRGFSGTYFKEYIEASDPAFAIGEYWDSLAY-ENGSLCYNQDA 210
+NWL++ I F GWR DFV+G++ + K Y+E + P FA+GEYW+SL+Y ++G L YNQDA
Sbjct: 1 MNWLKTEIGFSGWRFDFVKGYAPSITKIYMENTSPDFAVGEYWNSLSYGQDGKLNYNQDA 60
Query: 211 HRQRIVNWINATGGTSSAFDVTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFL 270
R +VNW+ GG +AFD TTKGIL +A+ + WRL D GKP G++G P TF+
Sbjct: 61 ARGELVNWVENGGGVVNAFDFTTKGILQAAVQGELWRLKDSNGKPPGLIGIKPENGATFI 120
Query: 271 ENHDTGSTQGHWPFPRDKLMQGYAYILTHPGTPTIFYDHFYDFGIRDVITELVEARKRAD 330
+NHDTGSTQ WPFP DK+MQGYAYILTHPGTP+IFYDHF+D+G++D I +L R+R
Sbjct: 121 DNHDTGSTQKLWPFPSDKVMQGYAYILTHPGTPSIFYDHFFDWGLKDQIAKLTAIRQRNG 180
Query: 331 IHCRSSVKIYHANNEGYVAQIGDTLVMKLGHFDWNPSKEI-NLDGSWQKFVDKGSDYQVW 389
I+ +S+V I A+ + YVA+I + +++K+G P ++ NL S G DY VW
Sbjct: 181 INMKSTVNILAADADLYVAKIDNKIIVKIG-----PRMDLGNLIPSNFHVATSGQDYAVW 235
>IMGA|Medtr1g032120.1 Alpha amylase, catalytic region
chr01_pseudomolecule_IMGAG_V3 7911048-7912579 E
EGN_Mt090430 20090702
Length = 204
Score = 229 bits (583), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 139/200 (69%), Gaps = 4/200 (2%)
Query: 97 VWNIFGG-KISWGPEAIVCDDPNFQGRGNPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWL 155
++N F G + W A+ G GN ++G IFH PNIDH+QDFVRKDI WL WL
Sbjct: 1 MYNRFDGIPLPWDERAVTSST---GGLGNRNTGAIFHGFPNIDHTQDFVRKDIIGWLQWL 57
Query: 156 RSHICFDGWRLDFVRGFSGTYFKEYIEASDPAFAIGEYWDSLAYENGSLCYNQDAHRQRI 215
R ++ F +R D+ +G+S Y KEYIE P ++GEYWD+ Y +L YNQD HRQRI
Sbjct: 58 RHNVGFQDFRFDYAKGYSPKYVKEYIEGPKPMLSVGEYWDTCNYNGSTLDYNQDNHRQRI 117
Query: 216 VNWINATGGTSSAFDVTTKGILHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTFLENHDT 275
+NWI+ TG S+AFD TTKGIL A+ ++WRL D QGKP GV+GWWPSR+VTF++NHDT
Sbjct: 118 INWIDGTGQLSTAFDFTTKGILQEAVKREFWRLRDAQGKPPGVIGWWPSRSVTFVDNHDT 177
Query: 276 GSTQGHWPFPRDKLMQGYAY 295
GSTQ HWPFP D +M+ + +
Sbjct: 178 GSTQAHWPFPSDHVMEVHIF 197
>IMGA|Medtr3g083110.1 Glycine hydroxymethyltransferase; ;
chr03_pseudomolecule_IMGAG_V3 19450586-19448989 E
EGN_Mt090430 20090702
Length = 233
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 79/143 (55%), Gaps = 31/143 (21%)
Query: 124 NPSSGDIFHAAPNIDHSQDFVRKDIKVWLNWLRSHICFDGWRLDFVRGFSGTYFKEYIEA 183
N ++G IFH PNIDH+QD VRKDI WL WLR ++ F +R D Y KEYIE
Sbjct: 111 NRNTGAIFHGFPNIDHTQDCVRKDIIGWLQWLRHNVGFQDFRFD--------YAKEYIEG 162
Query: 184 SDPAFAIGEYWDSLAYENGSLCYNQDAHRQRIVNWINATGGTSSAFDVTTKGILHSALHN 243
+ P ++GEY D Y +L YNQ AH F VT +++
Sbjct: 163 AKPLLSVGEYLDVCNYNGSTLDYNQ-AH-----------------FLVTK-----NSVKI 199
Query: 244 QYWRLIDPQGKPTGVMGWWPSRA 266
++WRL D QGKP GV+GWWPSR+
Sbjct: 200 EFWRLRDAQGKPPGVIGWWPSRS 222
>IMGA|Medtr1g032110.1 Alpha amylase, catalytic region
chr01_pseudomolecule_IMGAG_V3 7909817-7911046 F
EGN_Mt090430 20090702
Length = 127
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 53/80 (66%)
Query: 1 FQGFNWESWRRRWYVELAPKAADLYQSGVTAVWFPPPTESVAPQGYMPSDLYNLNSAYGT 60
FQ FNWES + W+ L K D+ ++G+T+ W PPPT S +P+GY P +LY+LNS YG+
Sbjct: 48 FQAFNWESHKYDWWANLESKVPDIAKAGITSAWLPPPTHSFSPEGYTPQNLYSLNSKYGS 107
Query: 61 EEELKYCIEEMHSHDLLALG 80
E +LK + ++ + + + G
Sbjct: 108 EHQLKALLTKVEATESQSNG 127
>IMGA|Medtr2g049210.1 alpha-amylase 2, putative
chr02_pseudomolecule_IMGAG_V3 13427105-13425750 H
EGN_Mt090430 20090702
Length = 67
Score = 50.8 bits (120), Expect = 1e-06, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 219 INATGGT-SSAFDVTTKGIL-HSALHNQYWRLIDPQGKPTGVMGWWPSRAVTF 269
I + GG S+A+D T KG++ + + ++WRL D QGKP GV+ WWPSR+ T
Sbjct: 13 IGSQGGQLSTAYDFTAKGMISRNHVKIEFWRLRDAQGKPPGVIEWWPSRSDTL 65
>IMGA|Medtr7g076100.1 Glycine hydroxymethyltransferase;
chr07_pseudomolecule_IMGAG_V3 15405231-15403115 E
EGN_Mt090430 20090702
Length = 116
Score = 50.1 bits (118), Expect = 2e-06, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 9/48 (18%)
Query: 231 VTTKGI---------LHSALHNQYWRLIDPQGKPTGVMGWWPSRAVTF 269
+TT+G+ + +++ ++WRL D QGKP GV+GWWPSR+VT
Sbjct: 67 MTTRGLGFTKISEQNMRNSVKIEFWRLRDAQGKPPGVIGWWPSRSVTL 114