Jatropha Genome Database

JcCA0079611.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0079611.10 + phase: 0 /partial
         (136 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g115380.1 Alpha/beta hydrolase fold chr04_pseudomolec...   187   1e-48
IMGA|Medtr5g047260.1 Alpha/beta hydrolase fold chr05_pseudomolec...   170   2e-43

>IMGA|Medtr4g115380.1 Alpha/beta hydrolase fold
           chr04_pseudomolecule_IMGAG_V3 26684019-26686181 E
           EGN_Mt090430 20090702
          Length = 150

 Score =  187 bits (475), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 86/125 (68%), Positives = 104/125 (83%)

Query: 1   VSLLKSLPLRLYANTLAFNNISFFTILDWTNIGRLHCLLPWWEDATVNFMFSGGYNIISQ 60
           V LLKS+PLR+YAN L+F NISF T LDWTNIGRLHCLLPWWEDA VNFM SGGYN+ SQ
Sbjct: 15  VYLLKSVPLRVYANYLSFTNISFSTSLDWTNIGRLHCLLPWWEDAAVNFMTSGGYNVASQ 74

Query: 61  IKQVKKRTLIIYGENDKIVNYKLVVKLHSELGNAIMRQVADSGHLPHVDKPNCVAKLISD 120
           IK VK++TLII+GEND+I++ KL V+LH EL +AI+RQ+ D GHLPHV++P+ V KLI +
Sbjct: 75  IKMVKQKTLIIWGENDRIISNKLAVQLHCELPDAIIRQIPDCGHLPHVERPDSVVKLIKE 134

Query: 121 FALHD 125
           F   D
Sbjct: 135 FVQKD 139


>IMGA|Medtr5g047260.1 Alpha/beta hydrolase fold
           chr05_pseudomolecule_IMGAG_V3 19938300-19930081 H
           EGN_Mt090430 20090702
          Length = 354

 Score =  170 bits (430), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 78/121 (64%), Positives = 99/121 (81%)

Query: 1   VSLLKSLPLRLYANTLAFNNISFFTILDWTNIGRLHCLLPWWEDATVNFMFSGGYNIISQ 60
           V LLKSLPLRLYAN L F N+S  TILD TN+GRLHCLLPWW+DATV+FM SGGY I   
Sbjct: 215 VYLLKSLPLRLYANYLTFTNMSLRTILDGTNVGRLHCLLPWWDDATVDFMTSGGYKIAPL 274

Query: 61  IKQVKKRTLIIYGENDKIVNYKLVVKLHSELGNAIMRQVADSGHLPHVDKPNCVAKLISD 120
           I++VK++TLII+GEND+IV+ KL V+LH EL +AI+RQ+ D GH+PH+++P+   KLI +
Sbjct: 275 IRKVKQKTLIIWGENDRIVSNKLAVQLHCELPDAILRQIPDCGHIPHLERPDSTIKLIVE 334

Query: 121 F 121
           F
Sbjct: 335 F 335