Jatropha Genome Database

JcCA0078541.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078541.10 + phase: 0 /partial
         (279 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g084880.2 UTP--glucose-1-phosphate uridylyltransferas...   459   e-130
IMGA|Medtr5g084880.1 UTP--glucose-1-phosphate uridylyltransferas...   459   e-130
IMGA|Medtr3g086690.1 UTP--glucose-1-phosphate uridylyltransferas...   431   e-121
IMGA|Medtr3g163770.1 Ribosomal protein S2; UTP--glucose-1-phosph...   166   1e-41

>IMGA|Medtr5g084880.2 UTP--glucose-1-phosphate uridylyltransferase
           chr05_pseudomolecule_IMGAG_V3 32345550-32353211 F
           EGN_Mt090430 20090702
          Length = 470

 Score =  459 bits (1180), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/280 (79%), Positives = 240/280 (85%), Gaps = 1/280 (0%)

Query: 1   MAAATD-KLTPLKSAVAGLNQISENEKNGFISLVARYLSGEAQHVDWSKIQTPTDEVVVP 59
           MA AT+  L  LKSAV GL+QISENEK GFI+LV+RYLSGEAQHV+WSKIQTPTDEVVVP
Sbjct: 1   MATATETNLANLKSAVTGLDQISENEKTGFINLVSRYLSGEAQHVEWSKIQTPTDEVVVP 60

Query: 60  YDTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIE 119
           YDTLAP P   ++                    MGCTGPKSVIEVR+GLTFLDLIV+QIE
Sbjct: 61  YDTLAPTPAGSSDIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVVQIE 120

Query: 120 HLNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDFTPLPCK 179
           +LNSKYG NVPLLLMNSFNTHDDTQKIIEKY   N+EIHTFNQSQYPR+VV+DF+PLP K
Sbjct: 121 NLNSKYGSNVPLLLMNSFNTHDDTQKIIEKYQNHNIEIHTFNQSQYPRLVVDDFSPLPSK 180

Query: 180 GQTGKDGWYPPGHGDVFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILSHLIRN 239
           G TGKDGWYPPGHGDVFPSL NSGKLD LLSQGKEYVFVANSDNLGAIVDLKIL+HLI +
Sbjct: 181 GNTGKDGWYPPGHGDVFPSLSNSGKLDALLSQGKEYVFVANSDNLGAIVDLKILNHLIEH 240

Query: 240 KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEH 279
           KNEYCMEVTPKTLADVKGGTLISYEG+VQLLEIAQVPDEH
Sbjct: 241 KNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEH 280


>IMGA|Medtr5g084880.1 UTP--glucose-1-phosphate uridylyltransferase
           chr05_pseudomolecule_IMGAG_V3 32345549-32351795 F
           EGN_Mt090430 20090702
          Length = 478

 Score =  459 bits (1180), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 223/280 (79%), Positives = 240/280 (85%), Gaps = 1/280 (0%)

Query: 1   MAAATD-KLTPLKSAVAGLNQISENEKNGFISLVARYLSGEAQHVDWSKIQTPTDEVVVP 59
           MA AT+  L  LKSAV GL+QISENEK GFI+LV+RYLSGEAQHV+WSKIQTPTDEVVVP
Sbjct: 1   MATATETNLANLKSAVTGLDQISENEKTGFINLVSRYLSGEAQHVEWSKIQTPTDEVVVP 60

Query: 60  YDTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIE 119
           YDTLAP P   ++                    MGCTGPKSVIEVR+GLTFLDLIV+QIE
Sbjct: 61  YDTLAPTPAGSSDIKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVRDGLTFLDLIVVQIE 120

Query: 120 HLNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDFTPLPCK 179
           +LNSKYG NVPLLLMNSFNTHDDTQKIIEKY   N+EIHTFNQSQYPR+VV+DF+PLP K
Sbjct: 121 NLNSKYGSNVPLLLMNSFNTHDDTQKIIEKYQNHNIEIHTFNQSQYPRLVVDDFSPLPSK 180

Query: 180 GQTGKDGWYPPGHGDVFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILSHLIRN 239
           G TGKDGWYPPGHGDVFPSL NSGKLD LLSQGKEYVFVANSDNLGAIVDLKIL+HLI +
Sbjct: 181 GNTGKDGWYPPGHGDVFPSLSNSGKLDALLSQGKEYVFVANSDNLGAIVDLKILNHLIEH 240

Query: 240 KNEYCMEVTPKTLADVKGGTLISYEGKVQLLEIAQVPDEH 279
           KNEYCMEVTPKTLADVKGGTLISYEG+VQLLEIAQVPDEH
Sbjct: 241 KNEYCMEVTPKTLADVKGGTLISYEGRVQLLEIAQVPDEH 280


>IMGA|Medtr3g086690.1 UTP--glucose-1-phosphate uridylyltransferase
           chr03_pseudomolecule_IMGAG_V3 20383730-20376014 E
           EGN_Mt090430 20090702
          Length = 495

 Score =  431 bits (1108), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 209/263 (79%), Positives = 228/263 (86%), Gaps = 1/263 (0%)

Query: 2   AAATDK-LTPLKSAVAGLNQISENEKNGFISLVARYLSGEAQHVDWSKIQTPTDEVVVPY 60
           +A TD  L+ LKSAVA L+QISENEKNGFI+LVARYLSGEAQHV+WSKIQTPTDEVVVPY
Sbjct: 8   SATTDNNLSNLKSAVAALSQISENEKNGFINLVARYLSGEAQHVEWSKIQTPTDEVVVPY 67

Query: 61  DTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVIQIEH 120
           D+LAP P+  +E                    MGCTGPKSVIEVR GLTFLDLIVIQIE+
Sbjct: 68  DSLAPTPEGSSEVKNLLDKLVVLKLNGGLGTTMGCTGPKSVIEVREGLTFLDLIVIQIEN 127

Query: 121 LNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDFTPLPCKG 180
           LNSKYG NVPLLLMNSFNTHDDTQKI+EKY+ SNV+IHTFNQSQYPR+VV+DF PLP KG
Sbjct: 128 LNSKYGSNVPLLLMNSFNTHDDTQKIVEKYTNSNVQIHTFNQSQYPRLVVDDFLPLPSKG 187

Query: 181 QTGKDGWYPPGHGDVFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILSHLIRNK 240
           QTG+DGWYPPGHGDVFPSL NSG+LD LLSQGKEYVFVANSDNLGA+VDLKIL+HLI+NK
Sbjct: 188 QTGRDGWYPPGHGDVFPSLMNSGQLDALLSQGKEYVFVANSDNLGALVDLKILNHLIQNK 247

Query: 241 NEYCMEVTPKTLADVKGGTLISY 263
           NEYCMEVTPKTLADVKGGTLISY
Sbjct: 248 NEYCMEVTPKTLADVKGGTLISY 270


>IMGA|Medtr3g163770.1 Ribosomal protein S2; UTP--glucose-1-phosphate
           uridylyltransferase chr03_pseudomolecule_IMGAG_V3
           43092701-43098309 E EGN_Mt090430 20090702
          Length = 600

 Score =  166 bits (420), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 85/199 (42%), Positives = 121/199 (60%), Gaps = 7/199 (3%)

Query: 57  VVPYDTLAPVPDDPAEXXXXXXXXXXXXXXXXXXXXMGCTGPKSVIEVRNGLTFLDLIVI 116
           V+PYD ++P+P D  +                    MG   PKS +++ +G TFLDLI+ 
Sbjct: 235 VIPYDAISPLPQDVEQTKNLLDKLVVLKLNHASGTNMGFQNPKSAMDICDGQTFLDLIIN 294

Query: 117 QIEHLNSKYGCNVPLLLMNSFNTHDDTQKIIEKYSKSNVEIHTFNQSQYPRIVVEDFTPL 176
           QIE L+SKYG  VPLL+ N  +THD T K++EKYS+S++++ TF Q + P + + D    
Sbjct: 295 QIETLDSKYGSRVPLLIFNKDDTHDSTLKVLEKYSESSIDVRTFKQGKGPELTLSD---- 350

Query: 177 PCKGQTGKDGWYPPGHGDVFPSLKNSGKLDTLLSQGKEYVFVANSDNLGAIVDLKILSHL 236
              G + K+  +   +GD+F SL   G LD LLSQGKEY+FV   DN+G I+D  IL+HL
Sbjct: 351 ---GHSSKEEVHTFDNGDIFRSLMIGGTLDLLLSQGKEYIFVMKCDNVGTIIDPNILNHL 407

Query: 237 IRNKNEYCMEVTPKTLADV 255
           + N  +YCMEVTP   ++V
Sbjct: 408 MTNAIDYCMEVTPSHSSNV 426