Jatropha Genome Database

JcCA0078491.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0078491.20 - phase: 0 
         (221 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g080310.1 Aminotransferase, class I and II; chr05_pse...   300   4e-82
IMGA|Medtr5g080310.2 Aminotransferase, class I and II; chr05_pse...   182   8e-47
IMGA|Medtr1g024020.1 Aminotransferase, class I and II; chr01_pse...   179   9e-46
IMGA|Medtr1g024030.1 Serine palmitoyltransferase 1, putative chr...   109   8e-25
IMGA|Medtr2g132340.1 ATLCB1 ; protein binding {Arabidopsi, relat...    52   3e-07

>IMGA|Medtr5g080310.1 Aminotransferase, class I and II;
           chr05_pseudomolecule_IMGAG_V3 30042155-30035289 F
           EGN_Mt090430 20090702
          Length = 479

 Score =  300 bits (767), Expect = 4e-82,   Method: Compositional matrix adjust.
 Identities = 138/185 (74%), Positives = 161/185 (87%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGLYLSRST+VYFKHNDM+SL+  LEK+T++ K  K LRRYI+VEA+YQNS
Sbjct: 199 DEGVHWGIQNGLYLSRSTVVYFKHNDMDSLEETLEKLTSKYKHTKNLRRYIVVEALYQNS 258

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPVEKIDIITAAMGHAL 154
           GQIAPLD+II+LKEKY FR+LL+ESNS GVLG SG+GLTE+YGVPVEK+D+ITAAMGHAL
Sbjct: 259 GQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHYGVPVEKLDLITAAMGHAL 318

Query: 155 ATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVIEDNPALVTKLKENIA 214
           ATEGGFCTG+AR+IDHQRLSSSGY F            ITAIDV+++NP ++TKLK NIA
Sbjct: 319 ATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDVLDENPNILTKLKNNIA 378

Query: 215 VLWKG 219
           VLWKG
Sbjct: 379 VLWKG 383


>IMGA|Medtr5g080310.2 Aminotransferase, class I and II;
           chr05_pseudomolecule_IMGAG_V3 30042437-30035289 F
           EGN_Mt090430 20090702
          Length = 343

 Score =  182 bits (463), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 83/106 (78%), Positives = 97/106 (91%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGLYLSRST+VYFKHNDM+SL+  LEK+T++ K  K LRRYI+VEA+YQNS
Sbjct: 199 DEGVHWGIQNGLYLSRSTVVYFKHNDMDSLEETLEKLTSKYKHTKNLRRYIVVEALYQNS 258

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPV 140
           GQIAPLD+II+LKEKY FR+LL+ESNS GVLG SG+GLTE+YGVPV
Sbjct: 259 GQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHYGVPV 304


>IMGA|Medtr1g024020.1 Aminotransferase, class I and II;
           chr01_pseudomolecule_IMGAG_V3 5525553-5529190 E
           EGN_Mt090430 20090702
          Length = 304

 Score =  179 bits (454), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 81/106 (76%), Positives = 96/106 (90%)

Query: 35  DEGVHWGIQNGLYLSRSTIVYFKHNDMESLQNVLEKVTAENKRAKKLRRYIIVEAVYQNS 94
           DEGVHWGIQNGLYLSRST+VYFKHN+M+SL+  LE +T+  KR K LRRYI++EA+YQNS
Sbjct: 199 DEGVHWGIQNGLYLSRSTVVYFKHNNMDSLRETLENITSIYKRTKNLRRYIVIEALYQNS 258

Query: 95  GQIAPLDEIIRLKEKYHFRVLLEESNSIGVLGRSGKGLTEYYGVPV 140
           GQIAPLDEII+LKEKY FR+LL+ESNS GVLG SG+GLTE+YGVP+
Sbjct: 259 GQIAPLDEIIKLKEKYCFRILLDESNSFGVLGSSGRGLTEHYGVPI 304


>IMGA|Medtr1g024030.1 Serine palmitoyltransferase 1, putative
           chr01_pseudomolecule_IMGAG_V3 5545233-5547408 E
           EGN_Mt090430 20090702
          Length = 98

 Score =  109 bits (273), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 50/74 (67%), Positives = 59/74 (79%)

Query: 140 VEKIDIITAAMGHALATEGGFCTGTARIIDHQRLSSSGYTFXXXXXXXXXXXXITAIDVI 199
           V+K+D+ITAAMGHALATEGGFCTG+AR+IDHQRLSSSGY F            ITAIDV+
Sbjct: 14  VDKLDLITAAMGHALATEGGFCTGSARVIDHQRLSSSGYVFSASLPPYLASAAITAIDVL 73

Query: 200 EDNPALVTKLKENI 213
           E+NP L+TKLK N+
Sbjct: 74  EENPNLLTKLKNNM 87


>IMGA|Medtr2g132340.1 ATLCB1 ; protein binding {Arabidopsi, related
           chr02_pseudomolecule_IMGAG_V3 31953155-31950135 E
           EGN_Mt090430 20090702
          Length = 264

 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/47 (53%), Positives = 28/47 (59%)

Query: 173 LSSSGYTFXXXXXXXXXXXXITAIDVIEDNPALVTKLKENIAVLWKG 219
           L  SGY F            ITAIDV+E+NP L+ KLK NI VLWKG
Sbjct: 54  LRYSGYVFSASLPPYLASAAITAIDVLEENPNLLAKLKSNIDVLWKG 100