Jatropha Genome Database

JcCA0077561.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077561.10 - phase: 0 
         (455 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g024740.1 AtGRF5, putative chr08_pseudomolecule_IMGAG...   194   1e-49
IMGA|Medtr5g027250.1 QLQ chr05_pseudomolecule_IMGAG_V3 11063203-...   137   9e-33
IMGA|Medtr7g126820.1 QLQ chr07_pseudomolecule_IMGAG_V3 29551657-...   130   2e-30
IMGA|Medtr3g123080.1 hypothetical protein chr03_pseudomolecule_I...   119   4e-27
IMGA|AC233070_21.1 WRC AC233070.4 97780-96320 E EGN_Mt090430 200...    82   6e-16
IMGA|Medtr8g151300.1 hypothetical protein chr08_pseudomolecule_I...    82   6e-16
IMGA|Medtr8g151010.1 hypothetical protein chr08_pseudomolecule_I...    64   1e-10
IMGA|Medtr8g024730.1 hypothetical protein chr08_pseudomolecule_I...    52   6e-07

>IMGA|Medtr8g024740.1 AtGRF5, putative chr08_pseudomolecule_IMGAG_V3
           4736562-4735415 E EGN_Mt090430 20090702
          Length = 231

 Score =  194 bits (492), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 86/112 (76%), Positives = 100/112 (89%), Gaps = 3/112 (2%)

Query: 9   FTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSPLSSKLFPRQPSHIGWSCFQ 68
           FT +QWQELE QAL+FKYMV+G PIP DL+++IKRS LD+ +SS++FP  P  IGW CF+
Sbjct: 12  FTPNQWQELEQQALVFKYMVTGTPIPPDLIYSIKRS-LDTSISSRIFPHPP--IGWGCFE 68

Query: 69  MGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 120
           MG GRK+DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRG+NRSRKPVE+
Sbjct: 69  MGFGRKVDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVEL 120


>IMGA|Medtr5g027250.1 QLQ chr05_pseudomolecule_IMGAG_V3
           11063203-11066007 E EGN_Mt090430 20090702
          Length = 324

 Score =  137 bits (346), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 67/112 (59%), Positives = 82/112 (73%), Gaps = 15/112 (13%)

Query: 8   PFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSPLSSKLFPRQPSHIGWSCF 67
           PFT SQWQELEHQALIFKY+ +G+ +P DLL  I++S          F   PS +G+   
Sbjct: 16  PFTVSQWQELEHQALIFKYLKAGLSVPPDLLLPIRKSLQ--------FMSHPS-LGY--- 63

Query: 68  QMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 119
               G+KIDPEPGRCRRTDGKKWRC+++A+PDSKYC+RHM R + RSRKPVE
Sbjct: 64  ---YGKKIDPEPGRCRRTDGKKWRCARDAHPDSKYCDRHMIRRRYRSRKPVE 112


>IMGA|Medtr7g126820.1 QLQ chr07_pseudomolecule_IMGAG_V3
           29551657-29554134 E EGN_Mt090430 20090702
          Length = 384

 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 69/121 (57%), Positives = 84/121 (69%), Gaps = 5/121 (4%)

Query: 9   FTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCL-DSPLSSKLFPRQPSHIGWSCF 67
           F+ SQWQELE QALIF+YM+ G  +P +LL  IK+S L  SP    L   QP+ +  S +
Sbjct: 79  FSLSQWQELELQALIFRYMLVGASVPPELLQPIKKSLLHSSPYF--LHHYQPTALLQSGY 136

Query: 68  QMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVPTQTVTA 127
             G G  +DPEPGRCRRTDGKKWRC+++     KYCERHMHRG+NRSRKPVE+PT T   
Sbjct: 137 -WGRG-AMDPEPGRCRRTDGKKWRCARDVVAGQKYCERHMHRGRNRSRKPVELPTPTSNG 194

Query: 128 N 128
            
Sbjct: 195 G 195


>IMGA|Medtr3g123080.1 hypothetical protein
           chr03_pseudomolecule_IMGAG_V3 30781101-30775833 E
           EGN_Mt090430 20090702
          Length = 553

 Score =  119 bits (298), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 56/116 (48%), Positives = 75/116 (64%), Gaps = 21/116 (18%)

Query: 8   PFTASQWQELEHQALIFKYMVSGIPIPSDLLFTIKRSCLDSPLSSKLFPRQPSHIGWSCF 67
           PFT++QW+ELE QA+I+KY+++ +P+PS LL       LD   + +L  R          
Sbjct: 113 PFTSAQWRELERQAMIYKYLMASLPVPSHLL------SLDGGFNLRLSNRN--------- 157

Query: 68  QMGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVPTQ 123
                   DPE GRC+RTDGKKWRCSK+   +++YCERHMHRG+ RSRKPVE+ T 
Sbjct: 158 ------NTDPEAGRCKRTDGKKWRCSKDVALNNRYCERHMHRGRPRSRKPVELHTN 207


>IMGA|AC233070_21.1 WRC AC233070.4 97780-96320 E EGN_Mt090430
           20090702
          Length = 331

 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 38/46 (82%)

Query: 75  IDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 120
           +D EP RCRRTDGKKWRC K+  P+ KYCERHMHRG+NRSRK VE 
Sbjct: 2   VDQEPHRCRRTDGKKWRCGKDTVPNQKYCERHMHRGRNRSRKLVET 47



 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 34/58 (58%)

Query: 75  IDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVPTQTVTANPSIT 132
           ++PEPGRCRRTDGKKWRC     P  KYC  HMHRG  R    +E P    T  P  T
Sbjct: 200 LEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKRRFTNLESPPPATTVIPKTT 257


>IMGA|Medtr8g151300.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 37276699-37275239 E
           EGN_Mt090430 20090702
          Length = 331

 Score = 81.6 bits (200), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 34/46 (73%), Positives = 38/46 (82%)

Query: 75  IDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEV 120
           +D EP RCRRTDGKKWRC K+  P+ KYCERHMHRG+NRSRK VE 
Sbjct: 2   VDQEPHRCRRTDGKKWRCGKDTVPNQKYCERHMHRGRNRSRKLVET 47



 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 31/58 (53%), Positives = 34/58 (58%)

Query: 75  IDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEVPTQTVTANPSIT 132
           ++PEPGRCRRTDGKKWRC     P  KYC  HMHRG  R    +E P    T  P  T
Sbjct: 200 LEPEPGRCRRTDGKKWRCKSAVLPGQKYCATHMHRGAKRRFTNLESPPPATTVIPKTT 257


>IMGA|Medtr8g151010.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 37149734-37150240 H
           EGN_Mt090430 20090702
          Length = 168

 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/39 (64%), Positives = 27/39 (69%)

Query: 75  IDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNR 113
           ++PEPGRCRRTDGKKWRC     P  KYC   MHRG  R
Sbjct: 51  LEPEPGRCRRTDGKKWRCKSAVLPGQKYCATLMHRGAKR 89


>IMGA|Medtr8g024730.1 hypothetical protein
           chr08_pseudomolecule_IMGAG_V3 4735413-4734756 E
           EGN_Mt090430 20090702
          Length = 82

 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 28/70 (40%), Positives = 41/70 (58%), Gaps = 5/70 (7%)

Query: 292 YSYLQLHSLSDHDSTPKQQKMYHQRSYLLGNEMKCQPPMKVERE-EQPQKTVHRFFDEWP 350
           YS  Q  +++D +S  +Q+    Q  ++LG ++K       ++E E  QK +H FF EW 
Sbjct: 7   YSSSQFQNINDDNSRQQQE----QHCFVLGTDIKSTRTTNKDKESETTQKPLHHFFGEWT 62

Query: 351 PKNKDSWLDL 360
           PKN DSWLDL
Sbjct: 63  PKNTDSWLDL 72