Jatropha Genome Database
- JcCA0077451.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0077451.10 - phase: 0 /pseudo
(556 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr3g100590.1 SWIRM chr03_pseudomolecule_IMGAG_V3 2412144... 226 2e-59
IMGA|Medtr4g144930.1 SWIRM chr04_pseudomolecule_IMGAG_V3 3663113... 226 2e-59
IMGA|Medtr3g100600.1 Heavy metal transport/detoxification protei... 225 4e-59
IMGA|Medtr4g095380.1 Zinc finger, ZZ-type; SWIRM; Homeodomain-re... 138 6e-33
IMGA|Medtr3g150840.1 SWIRM; Homeodomain-related chr03_pseudomole... 97 2e-20
IMGA|CU179634_1.1 SWIRM; Homeodomain-like CU179634.6 2217-631 H ... 94 2e-19
IMGA|Medtr3g159850.1 SWIRM; Homeodomain-related chr03_pseudomole... 79 4e-15
IMGA|Medtr5g092510.1 SWIRM; Homeodomain-related chr05_pseudomole... 72 8e-13
IMGA|Medtr2g030380.1 Zinc finger, ZZ-type; Calcium-binding EF-ha... 66 4e-11
IMGA|Medtr2g030360.1 Zinc finger, ZZ-type; Calcium-binding EF-ha... 65 1e-10
IMGA|Medtr4g028460.1 Zinc finger, ZZ-type; Homeodomain-related c... 50 3e-06
IMGA|Medtr3g106530.1 Zinc finger, ZZ-type; Calcium-binding EF-ha... 49 7e-06
>IMGA|Medtr3g100590.1 SWIRM chr03_pseudomolecule_IMGAG_V3
24121442-24123661 E EGN_Mt090430 20090702
Length = 363
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/160 (67%), Positives = 123/160 (76%)
Query: 188 SGKSPDHTPEKYMECRNYLVAKYMDNPEKRITVSDFQGVVFGIDNEDLTRIVRFLDHWGI 247
SGKS D TPEKYMECRNY+VA YM+ P KRIT SD QG+ G+ +EDLTRIVRFLDHWGI
Sbjct: 198 SGKSQDLTPEKYMECRNYIVALYMEEPGKRITASDCQGLQVGVGHEDLTRIVRFLDHWGI 257
Query: 248 INYCAAPPNRESWNGGSYLREDPNGEVHVPSAALKSIDSLIKFDKPTCRLKVADLYSSLP 307
INYCA P+ E N S L+ED +GE+ VPS ALKSIDSLIKFDK C+LK ++YS L
Sbjct: 258 INYCARTPSHEPPNAVSCLKEDTSGEIRVPSEALKSIDSLIKFDKTNCKLKAEEIYSPLT 317
Query: 308 CHDADFSDLDNKIRERLSENHCTYCSQPLPGIYYQSQKEI 347
H D DLD++IRE LSENHC YCS PLP +YYQSQKE
Sbjct: 318 MHSGDVPDLDSRIREHLSENHCNYCSCPLPAVYYQSQKEF 357
>IMGA|Medtr4g144930.1 SWIRM chr04_pseudomolecule_IMGAG_V3
36631131-36633347 E EGN_Mt090430 20090702
Length = 363
Score = 226 bits (577), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 108/160 (67%), Positives = 123/160 (76%)
Query: 188 SGKSPDHTPEKYMECRNYLVAKYMDNPEKRITVSDFQGVVFGIDNEDLTRIVRFLDHWGI 247
SGKS D TPEKYMECRNY+VA YM+ P KRIT SD QG+ G+ +EDLTRIVRFLDHWGI
Sbjct: 198 SGKSQDLTPEKYMECRNYIVALYMEEPGKRITASDCQGLQVGVGHEDLTRIVRFLDHWGI 257
Query: 248 INYCAAPPNRESWNGGSYLREDPNGEVHVPSAALKSIDSLIKFDKPTCRLKVADLYSSLP 307
INYCA P+ E N S L+ED +GE+ VPS ALKSIDSLIKFDK C+LK ++YS L
Sbjct: 258 INYCARTPSHEPPNAVSCLKEDTSGEIRVPSEALKSIDSLIKFDKTNCKLKAEEIYSPLT 317
Query: 308 CHDADFSDLDNKIRERLSENHCTYCSQPLPGIYYQSQKEI 347
H D DLD++IRE LSENHC YCS PLP +YYQSQKE
Sbjct: 318 MHSGDVPDLDSRIREHLSENHCNYCSCPLPAVYYQSQKEF 357
>IMGA|Medtr3g100600.1 Heavy metal transport/detoxification protein;
Homeodomain-related chr03_pseudomolecule_IMGAG_V3
24124465-24126067 E EGN_Mt090430 20090702
Length = 233
Score = 225 bits (574), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 113/190 (59%), Positives = 137/190 (72%), Gaps = 31/190 (16%)
Query: 342 QSQKEIDVLLCSDCFHEGRFVTGHSTLDFIKMDPTKDYGDLDGESWSDQETLLLLEAMEI 401
Q ++D+LLC+DCFH+G+FV GHS++DF+++D ++DYG+LD ESW+DQETLLLLEAMEI
Sbjct: 42 QQNGKVDILLCTDCFHDGKFVVGHSSIDFLRVDSSRDYGELDVESWTDQETLLLLEAMEI 101
Query: 402 YNENWNEIAEHVGTKSKSQCILHFLRLPMEDGLLENIEVPSMPNSSNLSSRDDHGRIHLH 461
Y+ENWNEIAEHVGTKSK+QCILHFLRLPMEDG LENI VPSM SSN+ +RDD+GR H +
Sbjct: 102 YHENWNEIAEHVGTKSKAQCILHFLRLPMEDGKLENINVPSMSVSSNVMNRDDNGRSHHY 161
Query: 462 SNGDLPXXXXXXXXXXXXXXXDYVIVTFICFPMLSAGSSCQDADSESRIPFANSGNPVMA 521
SNGD SAG DS+SR+PFANSGNPVMA
Sbjct: 162 SNGD------------------------------SAGPVHHIRDSDSRLPFANSGNPVMA 191
Query: 522 LVCLHLCSAL 531
LV L SA+
Sbjct: 192 LVAF-LASAV 200
>IMGA|Medtr4g095380.1 Zinc finger, ZZ-type; SWIRM;
Homeodomain-related chr04_pseudomolecule_IMGAG_V3
19820185-19828429 E EGN_Mt090430 20090702
Length = 1041
Score = 138 bits (348), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 100/260 (38%), Positives = 143/260 (55%), Gaps = 23/260 (8%)
Query: 188 SGKSPDHTPEKYMECRNYLVAKYMDNPEKRITVSDFQGVVFGIDNEDLTRIVRFLDHWGI 247
+G S + TP+KYME RN+++ K+ NP +I + D + G D++ I+ FLD+WG+
Sbjct: 166 NGISENRTPDKYMEIRNWIMKKFHSNPNIQIELKDLSELDIG-DSDARQEIMEFLDYWGL 224
Query: 248 INYCAAPPNRESWNGGSYLREDPNGEVHVPSAALKSIDSLIKFDK----PTCRLKVADLY 303
IN+ P S + D +GE S ++ L F+ P K +
Sbjct: 225 INFHPFP----STDSAVASTGD-DGEAEKNSL----LEKLYHFETLQSCPPAVQKTGLIT 275
Query: 304 SSL-------PCHDADFSDLDNKIRERLSENHCTYCSQPLPGIYYQSQKEIDVLLCSDCF 356
++ P + + E L E HC CS Y QK+ D LC+DCF
Sbjct: 276 PAMTSGLFPEPAIAEELVKQEGPAVEML-EYHCNSCSGDCSRKRYHCQKQADFDLCTDCF 334
Query: 357 HEGRFVTGHSTLDFIKMDPTKDYGDLDGESWSDQETLLLLEAMEIYNENWNEIAEHVGTK 416
+ +F TG S LDFI M+P + G G+ W+DQETLLLLEA+E+Y ENW EIAEHVGTK
Sbjct: 335 NNRKFGTGMSPLDFILMEPAEAAGVSSGK-WTDQETLLLLEALELYKENWTEIAEHVGTK 393
Query: 417 SKSQCILHFLRLPMEDGLLE 436
SK+QCILHF+++P+ED ++
Sbjct: 394 SKAQCILHFVQMPIEDAFVD 413
>IMGA|Medtr3g150840.1 SWIRM; Homeodomain-related
chr03_pseudomolecule_IMGAG_V3 39815332-39809775 E
EGN_Mt090430 20090702
Length = 540
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 136/287 (47%), Gaps = 29/287 (10%)
Query: 177 EVEFMWFQCIQSGKSPDHTPEKYMECRNYLVAKYMDNPEKRITVSDFQGVVFGIDNEDLT 236
E E F+ G S TP+ Y E R++++ KY + P +R+T ++ + + G D L
Sbjct: 32 ETEKTAFKEYFDGTSITRTPKIYKEYRDFIINKYREEPSRRLTFTEVRKSLVG-DVTFLN 90
Query: 237 RIVRFLDHWGIINYCAAPPNRESWNGGSYLRED---------PNG-EVHVPSAALKSI-- 284
++ FL+ WG+INY A + + +E PNG V +LK I
Sbjct: 91 KVFLFLECWGLINYGAPSAGNDGEAEKEHEKERCKLKVEEGAPNGIRVVATPNSLKPISL 150
Query: 285 --DSLIKF---DKPTCRLKVADLYSSLPCHDADFSDLDNKIRERLSENHCTYCSQPLPGI 339
D+ I D+ +K+A L A +SD+ + R E +C C
Sbjct: 151 PRDTKIAAGGGDESGAGVKIAPL--------ASYSDVYGDLIRR-KEVNCGNCGDKCGSG 201
Query: 340 YYQSQKEIDVLLCSDCFHEGRFVTGHSTLDFIKMDPTKDYGDLDGESWSDQETLLLLEAM 399
+Y+S K+ + ++C+ CF G + S DF K++ + + W++ ETLLLLE++
Sbjct: 202 HYRSTKD-NFIICTKCFKNGNYGEKRSMEDF-KLNESSEISANHSAVWTEGETLLLLESV 259
Query: 400 EIYNENWNEIAEHVGTKSKSQCILHFLRLPMEDGLLENIEVPSMPNS 446
+ ++W +A+ V TK+K +CI + LP + +L ++ NS
Sbjct: 260 LKHGDDWELVAQSVRTKTKLECISKLIELPFGELMLASVRRNDNSNS 306
>IMGA|CU179634_1.1 SWIRM; Homeodomain-like CU179634.6 2217-631 H
EGN_Mt090430 20090702
Length = 366
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 126/277 (45%), Gaps = 53/277 (19%)
Query: 189 GKSPDHTPEKYMECRNYLVAKYMDNPEKRITVSDFQGVVFGIDNEDLTRIVRFLDHWGII 248
G+SP P+ Y RN ++ ++ DNP K+IT ++ + + G D + R+ F + WG+I
Sbjct: 100 GRSPSKNPKTYKYYRNTIIRRFRDNPTKKITFTEARKTIVG-DVGSIRRVFDFSETWGLI 158
Query: 249 NYCAAPPNRESWNGGSYLREDPNGEVHVPSAALKSIDSLIKFDKPTCRLKVADLYSSLPC 308
NY A S SLIK+++ + A S+
Sbjct: 159 NYTA-----------------------------NSSKSLIKWEEKESKSTSA---SAPQN 186
Query: 309 HDADFSDLDNKIRERLSENHC-TYCSQPLPGIYYQSQKEIDVLLCSDCF--HEGRFVTGH 365
DA+ + D + ++ N C T C I + + D+ LC+ C+ ++ R +
Sbjct: 187 ADANGTSTDFTLPKKRICNLCKTVCR-----IACFASDKYDLTLCARCYVSNDNRVGVNN 241
Query: 366 STLDFIKMDPTKDYGDLDGESWSDQETLLLLEAMEIYNENWNEIAEHVGTKSKSQCILHF 425
S L +++ + W+D+ETL LLEA+ Y ++W ++AEHVG +S +C+ F
Sbjct: 242 SELRRVEI------SEEVKTDWTDKETLHLLEALMHYGDDWKKVAEHVGGRSTKECVARF 295
Query: 426 LRLPMEDGLLENIEVPSMPNSSNLSSRDDHGRIHLHS 462
++LP + + P S+ + S ++L S
Sbjct: 296 VKLPFGEQFM------GPPESAEMDSESRSETMYLQS 326
>IMGA|Medtr3g159850.1 SWIRM; Homeodomain-related
chr03_pseudomolecule_IMGAG_V3 41945959-41948580 F
EGN_Mt090430 20090702
Length = 483
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 106/249 (42%), Gaps = 44/249 (17%)
Query: 196 PEKYMECRNYLVAKYMDNPEKRITVSDFQGVVFGIDNEDLTRIVRFLDHWGIINYCAAPP 255
P Y RN +V + NP ++IT +D + + G D + R+ FL+ WG+INY
Sbjct: 86 PRVYKYYRNSIVKFFRFNPNRKITFTDVRKTLVG-DVGSIRRVFDFLEAWGLINY----- 139
Query: 256 NRESWNGGSYLREDPNGEVHVPSAALKSIDSLIKFDKPTCRLKVADLYSSLPCHDADFSD 315
H S+ K + K KP A+ S P +A
Sbjct: 140 -------------------HPSSSLSKPLKWEDKDTKPDAASNSAESPSPAPVKEA---- 176
Query: 316 LDNKIRERLSENHCTYCSQPLPGIYYQSQKEIDVLLCSDCFHEGRFVTGHSTLDFIKMDP 375
+R+ C+ C + +K ++ LC+ CF G + G S +F +++
Sbjct: 177 ------KRI----CSGCKNLCVMACFACEKN-NMTLCARCFIRGNYRIGMSNTEFKRVEI 225
Query: 376 TKDYGDLDGESWSDQETLLLLEAMEIYNENWNEIAEHVGTKSKSQCILHFLRLPMEDGLL 435
+++ + W+++ETL LLEA+ + ++W +A V ++ +C+ FL LP D L
Sbjct: 226 SEETKN----EWTEKETLNLLEAITNFGDDWKRVAHQVVGRTDKECVARFLELPFGDQFL 281
Query: 436 ENIEVPSMP 444
S P
Sbjct: 282 HYPHSESAP 290
>IMGA|Medtr5g092510.1 SWIRM; Homeodomain-related
chr05_pseudomolecule_IMGAG_V3 36275756-36277159 E
EGN_Mt090430 20090702
Length = 433
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 103/241 (42%), Gaps = 49/241 (20%)
Query: 194 HTPEKYMECRNYLVAKYMDNPEKRITVSDFQGVVFGIDNEDLTRIVRFLDHWGIINYCAA 253
P Y RN +V + NP ++IT +D + ++ G D + R+ FL+ WG+INY
Sbjct: 58 KNPRVYKYYRNSIVKFFRFNPNRKITFTDVRKIIVG-DVGSIRRVFDFLEAWGLINY--- 113
Query: 254 PPNRESWNGGSYLREDPNGEVHVPSAALKSIDSLIKFDKPTCRLKVADLYSSLPCHDADF 313
P+ + P LK D K D + + L +P ++A
Sbjct: 114 ---------------HPSSSLSKP---LKWEDKDAKSDAASNSTESPSL---VPANEA-- 150
Query: 314 SDLDNKIRERLSENHCTYCSQPLPGIYYQSQKEIDVLLCSDCFHEGRFVTGHSTLDFIKM 373
+R+ C+ C + LC+ CF G + G S F ++
Sbjct: 151 --------KRI----CSVCMDCFACDKNNRK------LCARCFIRGNYRIGMSNTKFKRV 192
Query: 374 DPTKDYGDLDGESWSDQETLLLLEAMEIYNENWNEIAEHVGTKSKSQCILHFLRLPMEDG 433
+ +++ + W+++ETL LLEA+ + ++W ++ V ++ +C+ FL LP D
Sbjct: 193 EISEETKN----EWTEEETLNLLEAITNFGDDWKRVSHQVVGRTDKECVARFLELPFGDQ 248
Query: 434 L 434
L
Sbjct: 249 L 249
>IMGA|Medtr2g030380.1 Zinc finger, ZZ-type; Calcium-binding EF-hand;
Homeodomain-related chr02_pseudomolecule_IMGAG_V3
8439450-8444257 E EGN_Mt090430 20090702
Length = 498
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 5/104 (4%)
Query: 328 HCTYCSQPLPG-IYYQSQKEIDVLLCSDCFHEGRFVTGH-STLDFIKMDPTKDYGDLDGE 385
HC YC + + G I + D LC +CF G +T H S D+ M+ K L
Sbjct: 49 HCNYCKKNITGVIRIKCAVCPDFDLCVECFSVGAELTPHKSNHDYRVMN--KLSFPLVSP 106
Query: 386 SWSDQETLLLLEAMEIYN-ENWNEIAEHVGTKSKSQCILHFLRL 428
W+ E +L+LE +E+Y ENW E+AEHVGTK+K C+ H+++
Sbjct: 107 DWNADEEMLILEGIEMYGLENWAEVAEHVGTKNKEACMEHYMKF 150
>IMGA|Medtr2g030360.1 Zinc finger, ZZ-type; Calcium-binding EF-hand;
SWIRM; Homeodomain-related chr02_pseudomolecule_IMGAG_V3
8411862-8416752 E EGN_Mt090430 20090702
Length = 551
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 56/101 (55%), Gaps = 5/101 (4%)
Query: 328 HCTYCSQPLPG-IYYQSQKEIDVLLCSDCFHEGRFVTGH-STLDFIKMDPTKDYGDLDGE 385
HC YC++ + G I + K D LC +CF G VT H S ++ MD + G
Sbjct: 49 HCNYCNKDITGKIRIKCAKCPDFDLCIECFSVGAEVTPHKSNHNYRVMDNLNFHFICPG- 107
Query: 386 SWSDQETLLLLEAMEIYN-ENWNEIAEHVGTKSKSQCILHF 425
W + +LLLE +E+Y NW E+AEHVGTK+K CI H+
Sbjct: 108 -WHADDEILLLEGIEMYGMGNWAEVAEHVGTKNKEACIEHY 147
>IMGA|Medtr4g028460.1 Zinc finger, ZZ-type; Homeodomain-related
chr04_pseudomolecule_IMGAG_V3 6547595-6550208 E
EGN_Mt090430 20090702
Length = 403
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 62/105 (59%), Gaps = 3/105 (2%)
Query: 323 RLSENHCTYCSQPLPG-IYYQSQKEIDVLLCSDCFHEGRFVTGHSTLDFIKMDPTKDYGD 381
++S HC YC++ + G I + D LC +CF G +T H + ++ +
Sbjct: 48 KVSLYHCNYCNKDISGKIRIKCAVCQDFDLCIECFSVGVELTPHKSNHPYRVMDNLSF-P 106
Query: 382 LDGESWSDQETLLLLEAMEIYN-ENWNEIAEHVGTKSKSQCILHF 425
L WS +E +LLLEA+++Y NWN++A+++GTKSKSQCI H+
Sbjct: 107 LICPDWSAEEEMLLLEALDMYGFGNWNDVADNIGTKSKSQCIDHY 151
>IMGA|Medtr3g106530.1 Zinc finger, ZZ-type; Calcium-binding EF-hand;
SWIRM; Homeodomain-related chr03_pseudomolecule_IMGAG_V3
26826955-26834002 E EGN_Mt090430 20090702
Length = 565
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 17/112 (15%)
Query: 323 RLSENHCTYCSQPLPG-IYYQSQKEIDVLLCSDCFHEGRFVTGHSTLDFIKMDPTKDYGD 381
++S HC YC++ + G I + D LC +CF G +T H + Y
Sbjct: 48 KVSLYHCNYCNKDISGKIRIKCAVCQDFDLCIECFSVGVELTPHKS--------NHPYRV 99
Query: 382 LDGES-------WSDQETLLLLEAMEIYN-ENWNEIAEHVGTKSKSQCILHF 425
+D S WS +E +LLLEA+++Y NWN++A+++GTKSKSQCI H+
Sbjct: 100 MDNLSFPLICPDWSAEEEMLLLEALDMYGFGNWNDVADNIGTKSKSQCIDHY 151