Jatropha Genome Database

JcCA0077211.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0077211.10 - phase: 0 /partial
         (250 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g023630.1 Serine acetyltransferase, N-terminal; Trime...   328   1e-90
IMGA|Medtr5g103050.1 Serine acetyltransferase, N-terminal; Trime...   188   3e-48
IMGA|Medtr4g125940.1 Trimeric LpxA-like chr04_pseudomolecule_IMG...   102   2e-22

>IMGA|Medtr5g023630.1 Serine acetyltransferase, N-terminal; Trimeric
           LpxA-like chr05_pseudomolecule_IMGAG_V3 9304754-9309459
           E EGN_Mt090430 20090702
          Length = 336

 Score =  328 bits (841), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 164/242 (67%), Positives = 197/242 (81%), Gaps = 19/242 (7%)

Query: 1   MACLSEESCWVSSSLPEMLS-RRLSLKDNQENGEAEANSTPFPIEKVFPVYAMGFSKPDS 59
           MAC++  + W++  L  M+S +R  L            S+ + +EKVFPVYAMG   PD 
Sbjct: 1   MACVTHHN-WLN--LSNMVSEKRFPL------------SSSYRLEKVFPVYAMGLPDPDP 45

Query: 60  EFVVSPGDSGDPIWDAVREEAKLEAEKEPILSSFLYASILSHDRLEQALAFVLANRLQNP 119
           E ++   D  DPIW+AV++EAK EAEKEP+LSSFLYAS+L+H+ LEQ LAFV+ANRLQ+P
Sbjct: 46  ESIL---DVSDPIWEAVKQEAKHEAEKEPVLSSFLYASVLAHECLEQVLAFVVANRLQSP 102

Query: 120 TLLATQLLDIISHVIMHDRRIKHSIRLDMQAFKDRDPACLSYCSTLLYLKGYHSLQSYRV 179
           TLLATQL+DII +V MHD+ I+ SIRLD+QAFKDRDPACLSYCS +LY+KG+HSLQ YRV
Sbjct: 103 TLLATQLMDIICNVFMHDKAIQRSIRLDVQAFKDRDPACLSYCSAILYMKGFHSLQVYRV 162

Query: 180 AHVLWNQGRKILALALQSRISEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVVGNRVSL 239
           AH LW+QGRK+LALALQSR+SEVFGIDIHPAAKIGEGILLDHGTGVVIGETAV+GNRVSL
Sbjct: 163 AHALWHQGRKVLALALQSRVSEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVIGNRVSL 222

Query: 240 MH 241
           M 
Sbjct: 223 MQ 224


>IMGA|Medtr5g103050.1 Serine acetyltransferase, N-terminal; Trimeric
           LpxA-like chr05_pseudomolecule_IMGAG_V3
           41270863-41269404 E EGN_Mt090430 20090702
          Length = 354

 Score =  188 bits (477), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 88/170 (51%), Positives = 126/170 (74%)

Query: 72  IWDAVREEAKLEAEKEPILSSFLYASILSHDRLEQALAFVLANRLQNPTLLATQLLDIIS 131
           +W  ++EEAK++   EPILSS+ Y SILS   LE ALA  LA +L + +L +T L D+  
Sbjct: 88  VWMKMQEEAKVDVIVEPILSSYYYVSILSQKTLETALANHLAVKLSSVSLPSTTLSDLFV 147

Query: 132 HVIMHDRRIKHSIRLDMQAFKDRDPACLSYCSTLLYLKGYHSLQSYRVAHVLWNQGRKIL 191
            ++  D+ I ++++ D++A  +RDPAC+S+    L  KG+ + Q++RVAH LW+ GRKIL
Sbjct: 148 RILESDKEIMYAMKNDLKAVNERDPACISHVHCFLNFKGFLACQAHRVAHNLWSNGRKIL 207

Query: 192 ALALQSRISEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVVGNRVSLMH 241
           A+ +Q+R+SEVFG+DIHP AKIG GILLDH TG+V+GETAV+GN VS++H
Sbjct: 208 AVMIQNRVSEVFGVDIHPGAKIGSGILLDHATGIVVGETAVIGNDVSILH 257


>IMGA|Medtr4g125940.1 Trimeric LpxA-like
           chr04_pseudomolecule_IMGAG_V3 29783033-29781873 E
           EGN_Mt090430 20090702
          Length = 175

 Score =  102 bits (254), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 44/68 (64%), Positives = 60/68 (88%)

Query: 174 LQSYRVAHVLWNQGRKILALALQSRISEVFGIDIHPAAKIGEGILLDHGTGVVIGETAVV 233
           L+++RVAH+LW Q R+ LALAL SR+++VF +DIHPAA+IG+G+L DH TGVV+GETAV+
Sbjct: 11  LKAHRVAHLLWRQARQPLALALHSRVADVFAVDIHPAARIGKGVLFDHATGVVVGETAVI 70

Query: 234 GNRVSLMH 241
           GN VS++H
Sbjct: 71  GNNVSILH 78