Jatropha Genome Database

JcCA0076481.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0076481.10 + phase: 0 
         (275 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g112510.1 Calponin-like actin-binding; EB1 chr08_pseu...   431   e-121
IMGA|Medtr5g016450.1 Calponin-like actin-binding; EB1 chr05_pseu...   304   3e-83

>IMGA|Medtr8g112510.1 Calponin-like actin-binding; EB1
           chr08_pseudomolecule_IMGAG_V3 25275245-25279012 E
           EGN_Mt090430 20090702
          Length = 290

 Score =  431 bits (1108), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 208/268 (77%), Positives = 233/268 (86%), Gaps = 3/268 (1%)

Query: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLTRIEEAASGAVQCQMMDMTYPGVVPMHKV 60
           MA+NIG+MDSAYFVGRNEIL WINN LQLNL+RIE+AASGAVQCQMMD+T+ GVVPMHKV
Sbjct: 1   MATNIGIMDSAYFVGRNEILNWINNLLQLNLSRIEDAASGAVQCQMMDVTHQGVVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 120
           NFDAKTEYD IQNYKVLQ+VFNKLKI+KHIEV+RLVKGRPLDNLEFLQWLKRYCDSINGG
Sbjct: 61  NFDAKTEYDKIQNYKVLQDVFNKLKIDKHIEVSRLVKGRPLDNLEFLQWLKRYCDSINGG 120

Query: 121 IMNENYNPVERRIKGGKDRNSKGCPKTSKSLQSNIMHNSASGEPVGLSKTSGPKPXXXXX 180
           IMNENYNPVERR+K GKDR+S    K SKSLQ+NIM+NS SG  +G ++TS  KP     
Sbjct: 121 IMNENYNPVERRVKVGKDRSS---LKKSKSLQTNIMNNSGSGNTLGPNRTSVAKPFRSSG 177

Query: 181 XXXXXXXXXEIETLSKEITDLKLSVDHLEKERDFYFAKLRDIEILCQTPELEDIPMAVAI 240
                    EI+TLSKEITDLK +VD LEKERDFYFAKLRD+EI+CQTPE+EDIP+ VAI
Sbjct: 178 GAGGDNSSAEIQTLSKEITDLKFTVDRLEKERDFYFAKLRDVEIICQTPEVEDIPVTVAI 237

Query: 241 KKILYAADAKESALEEAQEYLNQALNGE 268
           KKILYA DAKESAL+EAQ+YLNQA+N E
Sbjct: 238 KKILYATDAKESALDEAQDYLNQAMNVE 265


>IMGA|Medtr5g016450.1 Calponin-like actin-binding; EB1
           chr05_pseudomolecule_IMGAG_V3 5796783-5799319 E
           EGN_Mt090430 20090702
          Length = 376

 Score =  304 bits (778), Expect = 3e-83,   Method: Compositional matrix adjust.
 Identities = 156/277 (56%), Positives = 192/277 (69%), Gaps = 17/277 (6%)

Query: 1   MASNIGMMDSAYFVGRNEILTWINNRLQLNLTRIEEAASGAVQCQMMDMTYPGVVPMHKV 60
           MA+NIG+MD+AYFVGR+EIL+WIN+ LQLNL+++EEA SGAV CQ++D  +PG VPMHKV
Sbjct: 1   MATNIGIMDAAYFVGRSEILSWINSTLQLNLSKVEEACSGAVHCQLLDAAHPGTVPMHKV 60

Query: 61  NFDAKTEYDMIQNYKVLQEVFNKLKIEKHIEVNRLVKGRPLDNLEFLQWLKRYCDSINGG 120
           NFDAK EY+MIQNYKVLQ+VFNKLKI KHIEV++LVKGRPLDNLEF+QW+KRYCDS+N G
Sbjct: 61  NFDAKNEYEMIQNYKVLQDVFNKLKITKHIEVSKLVKGRPLDNLEFMQWMKRYCDSVNSG 120

Query: 121 IMNENYNPVERR--IKGGKDRNSKGCPKTSKSLQSNIMHNSASGEP----------VGLS 168
               +YNP+ERR   +GG    SK   K++ S  SN   +++   P          V  +
Sbjct: 121 --QHSYNPLERREMCRGGGREVSK---KSAHSQPSNKGGSTSHRPPQSSHTARRNDVSTA 175

Query: 169 KTSGPKPXXXXXXXXXXXXXXEIETLSKEITDLKLSVDHLEKERDFYFAKLRDIEILCQT 228
             + P                      ++IT+LKLS+D LEKERDFYFAKLRDIEILCQT
Sbjct: 176 NHANPVAAKAAKPAAAAAAASAAPAYDQQITELKLSIDSLEKERDFYFAKLRDIEILCQT 235

Query: 229 PELEDIPMAVAIKKILYAADAKESALEEAQEYLNQAL 265
           PE+E   +  AI+KILYA D   S LEEAQ  L   L
Sbjct: 236 PEVEHSAVFAAIQKILYATDDNGSELEEAQAMLTSGL 272