Jatropha Genome Database

JcCA0075831.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075831.10 - phase: 0 
         (235 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g109770.1 Nucleoside diphosphate kinase chr08_pseudom...   292   8e-80
IMGA|Medtr8g109770.2 Nucleoside diphosphate kinase chr08_pseudom...   244   2e-65

>IMGA|Medtr8g109770.1 Nucleoside diphosphate kinase
           chr08_pseudomolecule_IMGAG_V3 24694841-24699583 F
           EGN_Mt090430 20090702
          Length = 230

 Score =  292 bits (748), Expect = 8e-80,   Method: Compositional matrix adjust.
 Identities = 155/239 (64%), Positives = 176/239 (73%), Gaps = 13/239 (5%)

Query: 1   MEAVGVV-GSGGLCVPASSINRSSTHTTYSLSFVPGNKLGLRSS-HLAAFHSPSHLFSYS 58
           MEA+GV  G+  + V +S +  S+T+T  S          LR++ HL+AF S SHLFS S
Sbjct: 1   MEAMGVFCGTNSIYVTSSQLRTSNTNTRSS---------QLRTTQHLSAFPSKSHLFSSS 51

Query: 59  PSRPY--NAKHRKPTKTHIFLPHLVASLEQVEETYIMVKPDGVQRGLVGEIISRFEXXXX 116
            S  Y    + +  T T IFLPHL+ASLEQV+ TYIMVKPDGVQRGLVGEIISRFE    
Sbjct: 52  TSSSYAKTIRTKSSTNTGIFLPHLIASLEQVDRTYIMVKPDGVQRGLVGEIISRFEKKGF 111

Query: 117 XXXXXXXXQCPKELAEEHYKDLKARPFFPKLINYITSGPVVCMAWEGVGVVASARKLIGS 176
                   QC KELAEEHYKDL  R FFPKL  YITSGPVV MAWEGVGVV SARKLIG+
Sbjct: 112 KLIGLKLFQCSKELAEEHYKDLNQRSFFPKLSEYITSGPVVSMAWEGVGVVPSARKLIGA 171

Query: 177 TDPLQAEPGTIRGDLAVQTGRNVVHGSDSPENGKREIALWFKEGEICQWTPALASWFRE 235
           T+PLQAEPGTIRGD AV+TGRNV+HGSDSPENG+REIALWFKEGE+C+WTP L  W RE
Sbjct: 172 TNPLQAEPGTIRGDFAVETGRNVIHGSDSPENGEREIALWFKEGELCEWTPVLHPWLRE 230


>IMGA|Medtr8g109770.2 Nucleoside diphosphate kinase
           chr08_pseudomolecule_IMGAG_V3 24694841-24699583 F
           EGN_Mt090430 20090702
          Length = 155

 Score =  244 bits (624), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 117/151 (77%), Positives = 125/151 (82%)

Query: 85  EQVEETYIMVKPDGVQRGLVGEIISRFEXXXXXXXXXXXXQCPKELAEEHYKDLKARPFF 144
           EQV+ TYIMVKPDGVQRGLVGEIISRFE            QC KELAEEHYKDL  R FF
Sbjct: 5   EQVDRTYIMVKPDGVQRGLVGEIISRFEKKGFKLIGLKLFQCSKELAEEHYKDLNQRSFF 64

Query: 145 PKLINYITSGPVVCMAWEGVGVVASARKLIGSTDPLQAEPGTIRGDLAVQTGRNVVHGSD 204
           PKL  YITSGPVV MAWEGVGVV SARKLIG+T+PLQAEPGTIRGD AV+TGRNV+HGSD
Sbjct: 65  PKLSEYITSGPVVSMAWEGVGVVPSARKLIGATNPLQAEPGTIRGDFAVETGRNVIHGSD 124

Query: 205 SPENGKREIALWFKEGEICQWTPALASWFRE 235
           SPENG+REIALWFKEGE+C+WTP L  W RE
Sbjct: 125 SPENGEREIALWFKEGELCEWTPVLHPWLRE 155