Jatropha Genome Database

JcCA0075421.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075421.10 + phase: 0 
         (99 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g031130.1 Longin-like chr01_pseudomolecule_IMGAG_V3 7...   184   6e-48
IMGA|Medtr1g031030.1 Longin-like chr01_pseudomolecule_IMGAG_V3 7...   184   6e-48
IMGA|Medtr5g106580.1 Longin-like chr05_pseudomolecule_IMGAG_V3 4...   119   5e-28
IMGA|Medtr7g118420.1 Longin-like chr07_pseudomolecule_IMGAG_V3 2...    89   8e-19
IMGA|Medtr4g160280.1 Longin-like chr04_pseudomolecule_IMGAG_V3 4...    89   8e-19
IMGA|Medtr8g093300.1 Longin-like chr08_pseudomolecule_IMGAG_V3 2...    81   1e-16
IMGA|Medtr5g094900.1 Longin-like chr05_pseudomolecule_IMGAG_V3 3...    75   5e-15

>IMGA|Medtr1g031130.1 Longin-like chr01_pseudomolecule_IMGAG_V3
           7487370-7484618 E EGN_Mt090430 20090702
          Length = 142

 Score =  184 bits (468), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 91/93 (97%), Positives = 93/93 (100%)

Query: 7   IKFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 66
           ++FRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK
Sbjct: 50  VEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 109

Query: 67  VYLILDEFILAGELQETSKKAIIERMGELEKLE 99
           VYLILDEFILAGELQETSKKAIIERMGELEKLE
Sbjct: 110 VYLILDEFILAGELQETSKKAIIERMGELEKLE 142


>IMGA|Medtr1g031030.1 Longin-like chr01_pseudomolecule_IMGAG_V3
           7441036-7443743 E EGN_Mt090430 20090702
          Length = 142

 Score =  184 bits (468), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 91/93 (97%), Positives = 93/93 (100%)

Query: 7   IKFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 66
           ++FRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK
Sbjct: 50  VEFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 109

Query: 67  VYLILDEFILAGELQETSKKAIIERMGELEKLE 99
           VYLILDEFILAGELQETSKKAIIERMGELEKLE
Sbjct: 110 VYLILDEFILAGELQETSKKAIIERMGELEKLE 142


>IMGA|Medtr5g106580.1 Longin-like chr05_pseudomolecule_IMGAG_V3
           42855832-42853104 E EGN_Mt090430 20090702
          Length = 161

 Score =  119 bits (297), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 53/92 (57%), Positives = 70/92 (76%)

Query: 7   IKFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 66
           +++R HKV+Y+RYA L+F +C+D  DNEL  LE IH FVEILD +F +VCELDL+FNFHK
Sbjct: 50  VEWRGHKVVYKRYASLYFCMCIDDADNELEVLEMIHHFVEILDRYFGSVCELDLIFNFHK 109

Query: 67  VYLILDEFILAGELQETSKKAIIERMGELEKL 98
            Y ILDE ++AGELQE+SKK +   +   + L
Sbjct: 110 AYYILDEILIAGELQESSKKTVARLIAAQDSL 141


>IMGA|Medtr7g118420.1 Longin-like chr07_pseudomolecule_IMGAG_V3
           27945884-27948416 F EGN_Mt090430 20090702
          Length = 143

 Score = 88.6 bits (218), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 64/91 (70%)

Query: 7   IKFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 66
           ++ R +K++YRRYA LFF + VD  +NELA LE IHL VE +D  F NVCELD++F+  K
Sbjct: 51  VEHRNYKIVYRRYASLFFLVGVDDGENELAILEFIHLLVETMDRHFGNVCELDIMFHLEK 110

Query: 67  VYLILDEFILAGELQETSKKAIIERMGELEK 97
           V+ +L+E ++ G + ETSK  I+  +  ++K
Sbjct: 111 VHFMLEEMVMNGCIVETSKSNILTPIQLMDK 141


>IMGA|Medtr4g160280.1 Longin-like chr04_pseudomolecule_IMGAG_V3
           40594607-40591639 E EGN_Mt090430 20090702
          Length = 143

 Score = 88.6 bits (218), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 43/91 (47%), Positives = 64/91 (70%)

Query: 7   IKFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 66
           ++ R +K++YRRYA LFF + VD  +NELA LE IHL VE +D  F NVCELD++F+  K
Sbjct: 51  VEHRNYKIVYRRYASLFFLVGVDDGENELAILEFIHLLVETMDRHFGNVCELDIMFHLEK 110

Query: 67  VYLILDEFILAGELQETSKKAIIERMGELEK 97
           V+ +L+E ++ G + ETSK  I+  +  ++K
Sbjct: 111 VHFMLEEMVMNGCIVETSKSNILTPIQLMDK 141


>IMGA|Medtr8g093300.1 Longin-like chr08_pseudomolecule_IMGAG_V3
           20454949-20450113 E EGN_Mt090430 20090702
          Length = 223

 Score = 81.3 bits (199), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 38/85 (44%), Positives = 59/85 (69%)

Query: 13  KVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHKVYLILD 72
           +++Y+ +A L+F    D ++NELA L+ I +FVE LD  F NVCELD+VFN+ K++ ILD
Sbjct: 61  RLVYKHFATLYFVFIFDGSENELAMLDLIQVFVETLDKCFRNVCELDVVFNYSKMHTILD 120

Query: 73  EFILAGELQETSKKAIIERMGELEK 97
           E I  G++ ETS   +++ + E+ K
Sbjct: 121 EIIFGGQVLETSSAEVLKAVEEITK 145


>IMGA|Medtr5g094900.1 Longin-like chr05_pseudomolecule_IMGAG_V3
           37613694-37617071 H EGN_Mt090430 20090702
          Length = 133

 Score = 75.5 bits (184), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 33/60 (55%), Positives = 45/60 (75%)

Query: 7   IKFRTHKVIYRRYAGLFFSLCVDITDNELAYLECIHLFVEILDHFFSNVCELDLVFNFHK 66
           +++R  +V+Y+RYA L+F +C D  DNEL  L  IH +VE LD +F +VCELDL+FNFHK
Sbjct: 74  VEWRGLRVVYKRYASLYFCICNDQEDNELETLSIIHHYVETLDRYFGSVCELDLIFNFHK 133