Jatropha Genome Database

JcCA0075411.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075411.10 + phase: 0 
         (679 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g065190.1 Lipocalin; RINT-1/TIP-1 chr07_pseudomolecul...   934   0.0  

>IMGA|Medtr7g065190.1 Lipocalin; RINT-1/TIP-1
           chr07_pseudomolecule_IMGAG_V3 13363728-13360863 E
           EGN_Mt090430 20090702
          Length = 674

 Score =  934 bits (2415), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 454/674 (67%), Positives = 562/674 (83%), Gaps = 12/674 (1%)

Query: 12  KTALKLDNLVGDIEDAVSSAMSKK-LRKPSSTQNSEEMRLLAIETLRKTESFLTSITKAH 70
           +TALKLD LVGDIEDAVS  MS K +RK SS +NS +MRL AI+ L+ TE  LTSIT  H
Sbjct: 7   ETALKLDTLVGDIEDAVSYTMSNKNIRKHSSDENSGDMRLFAIKKLKMTEETLTSITNIH 66

Query: 71  PQWTHLVLAVDHRVDRALAILRPQAIADHRALLTSLGWPPPLSTLTSSNLDTGKSTEVPS 130
           PQW +LV AVDHRVDRALAILRPQAIADHRALL+SLGWPPPLS LTSS+ D      + +
Sbjct: 67  PQWRNLVSAVDHRVDRALAILRPQAIADHRALLSSLGWPPPLSALTSSHSDA----RIAN 122

Query: 131 PLFTMQGDLKNQYCENFLALCHLQELQRRRKSRQLEGHNTEVALHQPLWAIEELVNPISV 190
           PL +M  D K +Y ENFLALC+LQELQR+RKSRQL GH+ E+AL QPLWAIEELVNP+S+
Sbjct: 123 PLQSMHADHKLRYSENFLALCNLQELQRKRKSRQLVGHDREIALRQPLWAIEELVNPLSL 182

Query: 191 ACQRHFSKWINKLEFIFALVYKITSDYVDTMDELLQPLVDEARLVGYSCREEWISAMVTS 250
           A ++HFSKW++K EFIF LVYKIT DYVD++DE+LQPLVDEA++VGYSCREEWISAMVTS
Sbjct: 183 ASEKHFSKWVDKPEFIFTLVYKITRDYVDSVDEMLQPLVDEAKVVGYSCREEWISAMVTS 242

Query: 251 LSTYLAKEVFTIYVGQLDEESVAGVQSQG-ISWLHLIDLMIAFDKRIQSLMSHSGIMASL 309
           LSTYLAKE+F  Y+ QL+EES+ G+QS   ISWLHLIDLMIAFDK+I SL+ +SG++ SL
Sbjct: 243 LSTYLAKEIFPSYITQLEEESITGIQSSSRISWLHLIDLMIAFDKKIMSLVENSGVLLSL 302

Query: 310 QEDENLQKISSLSIFCDRPDWLDLWAEIELSDIVEKLKPEVDDDRNWTMKIEGTALLSGP 369
            +D+ LQ+ISSLS+FCDRPDWLDLWAEIEL D ++KLKP+++++ NW  KIE  AL S  
Sbjct: 303 -DDDILQRISSLSVFCDRPDWLDLWAEIELGDALDKLKPDIENENNWRKKIESVALSSNI 361

Query: 370 ENYKSPVVSVAFLRRISLLVDRCRSLPTISLRSRFLRLAGAPVIRRFLDFALLRCQEAEG 429
           +++KSP+VS AF+R ++ +V+RCRSLP ++LRS+FLRL G P+IR+F D  L+RCQEAEG
Sbjct: 362 DDHKSPLVSSAFVRHLASVVERCRSLPNVTLRSKFLRLVGVPIIRKFSDSILVRCQEAEG 421

Query: 430 LTALTDDDALIKVANSINAARYFESVLKEWCEDIFFLEMGFDHGDQLGI-SITNNEAREE 488
           LTALTD+DAL KVA SINAA YFESVL EW ED+FFLEMG D  D++ + S +N ++   
Sbjct: 422 LTALTDNDALTKVAISINAAHYFESVLNEWSEDVFFLEMGVDEEDKVELPSNSNRDSEGW 481

Query: 489 PVSG---IFDEEIRKLEEFRKEWVEKISVVILRGFDARCRDYVKNRRQWQEKGEEGWTVS 545
           P S    IFD+EI+KLEEFR EWVEKI+VVILRGFDAR R+Y+KN++QWQ K EEGWTVS
Sbjct: 482 PESSNRVIFDDEIKKLEEFRTEWVEKIAVVILRGFDARSREYLKNKKQWQ-KSEEGWTVS 540

Query: 546 KNLVGALDHLQGKMAIMEENLNAMDFVGVWRSLAAGVDRLLFNGVLMSNVKFHDCGIERF 605
           K L+ ALD+LQGKMA++EE LN+ DFVGVWRSLAAG+DRL+FNG+L+SN KFH+ G+ERF
Sbjct: 541 KTLIEALDYLQGKMAVVEEGLNSRDFVGVWRSLAAGIDRLIFNGILLSNAKFHNSGVERF 600

Query: 606 NNDMEVLFGVFGAWCLRPEGFFPKVSDGMKLLKMGEEQLRDNLAGGEKWLKENGIRNLGA 665
            +D++VLFGVFG+WCLRPEGFFP   +G+KLLKM E+++++ + GG++ LKENGIR+L  
Sbjct: 601 GSDLDVLFGVFGSWCLRPEGFFPNTIEGLKLLKMDEKRVQECMTGGKRRLKENGIRHLSV 660

Query: 666 AEAEKIINSRVFMS 679
           +EAEKI+ +RVF S
Sbjct: 661 SEAEKILKNRVFAS 674