Jatropha Genome Database

JcCA0075381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075381.10 + phase: 0 
         (359 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr8g129290.1 UbiA prenyltransferase chr08_pseudomolecule...   326   1e-89

>IMGA|Medtr8g129290.1 UbiA prenyltransferase
           chr08_pseudomolecule_IMGAG_V3 30490535-30497793 E
           EGN_Mt090430 20090702
          Length = 411

 Score =  326 bits (835), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 162/302 (53%), Positives = 209/302 (69%)

Query: 58  SIHHHFNPLYQFSRPHXXXXXXXXXXXXXLLPVETITELSPTFFMGLLKALVPSVLMNIY 117
           ++ +  +  Y+FSRPH             LL  E ++++SP FF G+L+A+V ++ MNIY
Sbjct: 110 AVKNSLDAFYRFSRPHTVIGTALSIISVSLLAAEKLSDISPLFFTGVLEAVVAALFMNIY 169

Query: 118 VVGLNQLFDIEIDKVNKPYLPLASGNFSKEIGITIVSISLFMSLGMGIMFESPPVVAALL 177
           +VGLNQL D+EIDK+NKPYLPLASG +S   G  IV  S  +S  +  +  S P+  AL 
Sbjct: 170 IVGLNQLSDVEIDKINKPYLPLASGEYSFATGAIIVVSSSILSFWLAWIVGSWPLFWALF 229

Query: 178 ISFVLGSVYSVELPFMRWKKQAFLAATCILIVRAIVVQLAFFAHMQKFVLGKPIVITKSL 237
           ISFVLG+ YS+ +P +RWK+ A LAA CIL VRA++VQLAFF HMQ FV  +P+V ++ L
Sbjct: 230 ISFVLGTAYSINVPLLRWKRFAVLAAMCILSVRAVIVQLAFFLHMQTFVYKRPVVFSRPL 289

Query: 238 VFAVAFMCFFSAVIALFKDIPDVDGDRDFGIRSFSVSLGQERVFWLCVNMXXXXXXXXXX 297
           +FA AFM FFS VIALFKDIPD++GD+ FGI+SFSV LGQ+RVFW+CV +          
Sbjct: 290 IFATAFMSFFSVVIALFKDIPDIEGDKIFGIQSFSVRLGQKRVFWICVTLLELAYGVSLV 349

Query: 298 XXXSCSLGPSKLITMLGHCTLALVLWMQAQSVDLSSNNSITCFYMFIWKLFYAEYFLIPF 357
              + S   SK++T LGH  LA +L+  A+SVDL S  SIT FYMFIWKLFYAEYFLIP 
Sbjct: 350 VGATSSCLWSKIVTSLGHAVLASILFNHAKSVDLKSKASITSFYMFIWKLFYAEYFLIPL 409

Query: 358 VR 359
           VR
Sbjct: 410 VR 411