Jatropha Genome Database

JcCA0075121.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0075121.10 + phase: 0 /partial
         (74 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g103050.1 5-methyltetrahydropteroyltriglutamate--homo...   133   2e-32
IMGA|Medtr3g110990.1 5-methyltetrahydropteroyltriglutamate--homo...   131   9e-32
IMGA|Medtr7g103050.2 5-methyltetrahydropteroyltriglutamate--homo...   111   8e-26
IMGA|Medtr7g103050.3 Methionine synthase, vitamin-B12 independen...   111   9e-26

>IMGA|Medtr7g103050.1
          5-methyltetrahydropteroyltriglutamate--homocysteine
          S-methyltransferase chr07_pseudomolecule_IMGAG_V3
          23004854-22999451 E EGN_Mt090430 20090702
          Length = 763

 Score =  133 bits (335), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 61/73 (83%), Positives = 67/73 (91%)

Query: 1  MASHIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSN 60
          MASHIVGYPRMGPKRELKFALESFWD KSSA+DL+KV+ +LR SIWKQM+  GIKYIPSN
Sbjct: 1  MASHIVGYPRMGPKRELKFALESFWDKKSSAEDLKKVSADLRASIWKQMSDVGIKYIPSN 60

Query: 61 TFSYYDQVLDTTA 73
          TF+YYD VLDTTA
Sbjct: 61 TFTYYDHVLDTTA 73


>IMGA|Medtr3g110990.1
           5-methyltetrahydropteroyltriglutamate--homocysteine
           S-methyltransferase chr03_pseudomolecule_IMGAG_V3
           28043141-28037951 E EGN_Mt090430 20090702
          Length = 813

 Score =  131 bits (329), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 59/71 (83%), Positives = 67/71 (94%)

Query: 4   HIVGYPRMGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSNTFS 63
           HIVGYPRMGPKRELKFALESFWDGKSSA++L++VA  LR +IWKQMA AGI++IPSNTFS
Sbjct: 52  HIVGYPRMGPKRELKFALESFWDGKSSAEELKQVAANLRSAIWKQMADAGIQHIPSNTFS 111

Query: 64  YYDQVLDTTAL 74
           YYDQVLDTTA+
Sbjct: 112 YYDQVLDTTAM 122


>IMGA|Medtr7g103050.2
          5-methyltetrahydropteroyltriglutamate--homocysteine
          S-methyltransferase chr07_pseudomolecule_IMGAG_V3
          23004854-22999451 E EGN_Mt090430 20090702
          Length = 753

 Score =  111 bits (278), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 57/63 (90%)

Query: 11 MGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSNTFSYYDQVLD 70
          MGPKRELKFALESFWD KSSA+DL+KV+ +LR SIWKQM+  GIKYIPSNTF+YYD VLD
Sbjct: 1  MGPKRELKFALESFWDKKSSAEDLKKVSADLRASIWKQMSDVGIKYIPSNTFTYYDHVLD 60

Query: 71 TTA 73
          TTA
Sbjct: 61 TTA 63


>IMGA|Medtr7g103050.3 Methionine synthase, vitamin-B12 independent
          chr07_pseudomolecule_IMGAG_V3 23004854-22999451 E
          EGN_Mt090430 20090702
          Length = 640

 Score =  111 bits (277), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 51/63 (80%), Positives = 57/63 (90%)

Query: 11 MGPKRELKFALESFWDGKSSAQDLEKVAFELRESIWKQMAGAGIKYIPSNTFSYYDQVLD 70
          MGPKRELKFALESFWD KSSA+DL+KV+ +LR SIWKQM+  GIKYIPSNTF+YYD VLD
Sbjct: 1  MGPKRELKFALESFWDKKSSAEDLKKVSADLRASIWKQMSDVGIKYIPSNTFTYYDHVLD 60

Query: 71 TTA 73
          TTA
Sbjct: 61 TTA 63