Jatropha Genome Database

JcCA0074421.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074421.20 - phase: 0 /partial
         (131 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g022930.1 Aconitate hydratase, C-terminal; ; ; ; chr0...   218   9e-58
IMGA|Medtr2g104020.1 Aconitate hydratase, C-terminal; ; ; ; chr0...   204   1e-53
IMGA|Medtr2g104020.2 Aconitate hydratase, C-terminal; ; chr02_ps...   203   2e-53
IMGA|Medtr4g062500.1 Aconitate hydratase, N-terminal; ; ; ; chr0...   202   5e-53
IMGA|Medtr1g090130.1 Aconitate hydratase, N-terminal; ; ; ; chr0...   169   3e-43

>IMGA|Medtr5g022930.1 Aconitate hydratase, C-terminal; ; ; ;
           chr05_pseudomolecule_IMGAG_V3 8954183-8961756 F
           EGN_Mt090430 20090702
          Length = 901

 Score =  218 bits (554), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 100/112 (89%), Positives = 110/112 (98%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFK+GEDADTLGLTGHERY+IDLP+SV
Sbjct: 790 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPSSV 849

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLIHAKH 131
           +EIRPGQD+ V+TDNGK+F+CTLRFDTEVELAYF+HGGILQY IRNLI+AKH
Sbjct: 850 NEIRPGQDITVVTDNGKTFSCTLRFDTEVELAYFNHGGILQYAIRNLINAKH 901


>IMGA|Medtr2g104020.1 Aconitate hydratase, C-terminal; ; ; ;
           chr02_pseudomolecule_IMGAG_V3 24439919-24430456 E
           EGN_Mt090430 20090702
          Length = 979

 Score =  204 bits (519), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 95/108 (87%), Positives = 101/108 (93%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCFK+GEDADTLGLTGHERY+IDLPN +
Sbjct: 870 AKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPNKI 929

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           SEI+PGQDV V TD GKSFTCT RFDTEVEL YF+HGGIL YVIRNLI
Sbjct: 930 SEIKPGQDVTVTTDTGKSFTCTARFDTEVELEYFNHGGILPYVIRNLI 977


>IMGA|Medtr2g104020.2 Aconitate hydratase, C-terminal; ;
           chr02_pseudomolecule_IMGAG_V3 24439919-24430456 E
           EGN_Mt090430 20090702
          Length = 287

 Score =  203 bits (516), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 95/108 (87%), Positives = 101/108 (93%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVI+KSFERIHRSNLVGMGIIPLCFK+GEDADTLGLTGHERY+IDLPN +
Sbjct: 178 AKGPMLLGVKAVISKSFERIHRSNLVGMGIIPLCFKSGEDADTLGLTGHERYTIDLPNKI 237

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           SEI+PGQDV V TD GKSFTCT RFDTEVEL YF+HGGIL YVIRNLI
Sbjct: 238 SEIKPGQDVTVTTDTGKSFTCTARFDTEVELEYFNHGGILPYVIRNLI 285


>IMGA|Medtr4g062500.1 Aconitate hydratase, N-terminal; ; ; ;
           chr04_pseudomolecule_IMGAG_V3 12126814-12136100 E
           EGN_Mt090430 20090702
          Length = 1001

 Score =  202 bits (513), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 94/108 (87%), Positives = 102/108 (94%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLC+K GEDADTLGLTGHER++IDLP+ +
Sbjct: 892 AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCYKPGEDADTLGLTGHERFTIDLPSKI 951

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           SEI+PGQDVKV TD+GKSFTC  RFDTEVELAYF+HGGIL YVIRNLI
Sbjct: 952 SEIKPGQDVKVTTDSGKSFTCIARFDTEVELAYFNHGGILPYVIRNLI 999


>IMGA|Medtr1g090130.1 Aconitate hydratase, N-terminal; ; ; ;
           chr01_pseudomolecule_IMGAG_V3 18140777-18146530 H
           EGN_Mt090430 20090702
          Length = 925

 Score =  169 bits (429), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 83/108 (76%), Positives = 93/108 (86%)

Query: 20  AKGPMLLGVKAVIAKSFERIHRSNLVGMGIIPLCFKTGEDADTLGLTGHERYSIDLPNSV 79
           AKGP+LLGVKAVIAKSFERIHRSNLVGMGIIPL FK+G+DA+TL LTG ER+++DLP  V
Sbjct: 816 AKGPLLLGVKAVIAKSFERIHRSNLVGMGIIPLRFKSGDDAETLQLTGLERFTVDLPERV 875

Query: 80  SEIRPGQDVKVLTDNGKSFTCTLRFDTEVELAYFDHGGILQYVIRNLI 127
           ++I PGQDV V TD+GKSFTC L  DT VELAY DHGGIL YVIR LI
Sbjct: 876 NDIEPGQDVNVTTDSGKSFTCKLCLDTRVELAYIDHGGILPYVIRILI 923