Jatropha Genome Database

JcCA0074091.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0074091.10 - phase: 0 /partial
         (207 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g120820.1 UbiA prenyltransferase chr04_pseudomolecule...   211   2e-55

>IMGA|Medtr4g120820.1 UbiA prenyltransferase
           chr04_pseudomolecule_IMGAG_V3 28161711-28164983 E
           EGN_Mt090430 20090702
          Length = 365

 Score =  211 bits (536), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 100/132 (75%), Positives = 115/132 (87%)

Query: 70  EEDIAKVTLVWRAIKLPIYSVALVPLTVGGAAAYLHTGVFSARRYFVLLASSILIITWLN 129
           +EDI+  TL+WRAIKLPIYSVALVPLTVG AAAYL TG+FSA+ YFVLLASSIL+ITWLN
Sbjct: 46  QEDISMETLIWRAIKLPIYSVALVPLTVGSAAAYLQTGIFSAKCYFVLLASSILVITWLN 105

Query: 130 LSNDVYDFDTGADKNKKESVVNLVGSRSGTLFAAYLSLALGFLGLTRTSLGAGNVQAILL 189
           LSNDVYDFDTG DKNKKESVVNLVGSR+G    AYL LALGF+GLT  ++ AGN++++L 
Sbjct: 106 LSNDVYDFDTGVDKNKKESVVNLVGSRTGIFIVAYLCLALGFVGLTWAAVEAGNIRSVLF 165

Query: 190 LACAVICGYIYQ 201
           L CA+ CGYIYQ
Sbjct: 166 LTCAIFCGYIYQ 177