Jatropha Genome Database

JcCA0072081.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0072081.10 - phase: 0 
         (180 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g104870.1 Heat shock protein DnaJ, N-terminal chr02_p...   226   4e-60

>IMGA|Medtr2g104870.1 Heat shock protein DnaJ, N-terminal
           chr02_pseudomolecule_IMGAG_V3 24852698-24846851 E
           EGN_Mt090430 20090702
          Length = 250

 Score =  226 bits (577), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 123/153 (80%), Positives = 135/153 (88%)

Query: 28  ERDYLLSQVTAAKEELLSKRRKQLKKDTASKIKSLVDEGKYEKQYEKSEEFQRELKLKVR 87
           ERDYLLSQV +AKEEL  KR+K LKKDTASK+KSLVDEGKY+KQYE+SEEF++ELKLKVR
Sbjct: 98  ERDYLLSQVNSAKEELRVKRKKHLKKDTASKMKSLVDEGKYDKQYEQSEEFKQELKLKVR 157

Query: 88  EILTEQEWRRRKMQMRISXXXXXXXXXXXXQKEMWKRKREHEEQWEGTREQRVSSWRDFM 147
           E+LTE+EWRRRKMQMRIS            QKE+WKRKREHEE+WEGTRE+RVSSWRDFM
Sbjct: 158 ELLTEKEWRRRKMQMRISEEEGRLKKDEEEQKEIWKRKREHEEEWEGTREKRVSSWRDFM 217

Query: 148 KTGKKGKKGEIRPPKLKTEDPNKSYVQRPVKRG 180
           K GKK KKGEIRPPKLKTEDPNKSYVQRPVKRG
Sbjct: 218 KGGKKNKKGEIRPPKLKTEDPNKSYVQRPVKRG 250