Jatropha Genome Database

JcCA0071331.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0071331.20 - phase: 0 /partial
         (76 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g083370.1 Ribose-phosphate pyrophosphokinase chr05_ps...   129   5e-31
IMGA|Medtr5g034640.1 Ribose-phosphate pyrophosphokinase chr05_ps...   104   9e-24
IMGA|Medtr5g034640.2 Ribose-phosphate pyrophosphokinase chr05_ps...   104   9e-24
IMGA|Medtr5g032420.1 hypothetical protein chr05_pseudomolecule_I...    59   7e-10
IMGA|Medtr5g033740.1 hypothetical protein chr05_pseudomolecule_I...    55   7e-09

>IMGA|Medtr5g083370.1 Ribose-phosphate pyrophosphokinase
           chr05_pseudomolecule_IMGAG_V3 31623817-31618259 E
           EGN_Mt090430 20090702
          Length = 321

 Score =  129 bits (323), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 61/76 (80%), Positives = 69/76 (90%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGSGSAFAYFWITDSCPLTVKSIANKPP 60
           KVLAA+GAAKVSAYVTHGVFPN+SW RFT K + S  AFAYFWITDSCP+TVK++AN+ P
Sbjct: 246 KVLAANGAAKVSAYVTHGVFPNQSWLRFTHKDEASEKAFAYFWITDSCPVTVKALANQAP 305

Query: 61  FEVLSLAGSIADALQI 76
           FEVLSLAGSIA+ALQI
Sbjct: 306 FEVLSLAGSIANALQI 321


>IMGA|Medtr5g034640.1 Ribose-phosphate pyrophosphokinase
           chr05_pseudomolecule_IMGAG_V3 14243771-14248223 F
           EGN_Mt090430 20090702
          Length = 401

 Score =  104 bits (260), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 67/77 (87%), Gaps = 1/77 (1%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGS-GSAFAYFWITDSCPLTVKSIANKP 59
           KVLAAHGA+K+SAYVTHG+FPN+SWERF   + G+  +AF+YFWITDSCPLTVK + +KP
Sbjct: 325 KVLAAHGASKISAYVTHGIFPNKSWERFGHDNGGNPETAFSYFWITDSCPLTVKEVMHKP 384

Query: 60  PFEVLSLAGSIADALQI 76
           PFEVLSLA SI+ +LQI
Sbjct: 385 PFEVLSLASSISASLQI 401


>IMGA|Medtr5g034640.2 Ribose-phosphate pyrophosphokinase
           chr05_pseudomolecule_IMGAG_V3 14243743-14248223 F
           EGN_Mt090430 20090702
          Length = 369

 Score =  104 bits (260), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 55/77 (71%), Positives = 67/77 (87%), Gaps = 1/77 (1%)

Query: 1   KVLAAHGAAKVSAYVTHGVFPNRSWERFTQKSDGS-GSAFAYFWITDSCPLTVKSIANKP 59
           KVLAAHGA+K+SAYVTHG+FPN+SWERF   + G+  +AF+YFWITDSCPLTVK + +KP
Sbjct: 293 KVLAAHGASKISAYVTHGIFPNKSWERFGHDNGGNPETAFSYFWITDSCPLTVKEVMHKP 352

Query: 60  PFEVLSLAGSIADALQI 76
           PFEVLSLA SI+ +LQI
Sbjct: 353 PFEVLSLASSISASLQI 369


>IMGA|Medtr5g032420.1 hypothetical protein
          chr05_pseudomolecule_IMGAG_V3 13128889-13128353 E
          EGN_Mt090430 20090702
          Length = 106

 Score = 58.5 bits (140), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 8  AAKVSAYVTHGVFPNRSWERFTQKSDGSGSAFAYFWITDSCPLTVKSIANKPPFEVLSLA 67
          +  + AYV    F +  +  F   ++   +AF YFWITDSCPLT+K + ++PPFEVLS +
Sbjct: 23 SLHIIAYVLRSPFLHSIFSDF-PCTENPETAFTYFWITDSCPLTMKEVIHRPPFEVLSQS 81

Query: 68 GSIADALQ 75
           ++   L 
Sbjct: 82 SNLMKMLH 89


>IMGA|Medtr5g033740.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 13756219-13755017 E
           EGN_Mt090430 20090702
          Length = 119

 Score = 55.5 bits (132), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 20/36 (55%), Positives = 28/36 (77%)

Query: 37  SAFAYFWITDSCPLTVKSIANKPPFEVLSLAGSIAD 72
           + F YFWITDSCPLTVK +  +PPFE+LS + ++ +
Sbjct: 83  TTFTYFWITDSCPLTVKEVMQRPPFELLSQSSNLME 118