Jatropha Genome Database

JcCA0066941.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0066941.10 + phase: 0 /partial
         (189 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g010120.1 CBS chr07_pseudomolecule_IMGAG_V3 2120338-2...   276   4e-75
IMGA|Medtr4g122040.1 CBS chr04_pseudomolecule_IMGAG_V3 28810497-...   251   2e-67
IMGA|Medtr2g010580.1 CBS chr02_pseudomolecule_IMGAG_V3 2604908-2...   244   2e-65
IMGA|Medtr6g062220.1 Protein of unknown function DUF21 chr06_pse...   192   8e-50
IMGA|Medtr6g062600.1 CBS chr06_pseudomolecule_IMGAG_V3 11503259-...   186   8e-48

>IMGA|Medtr7g010120.1 CBS chr07_pseudomolecule_IMGAG_V3
           2120338-2124503 E EGN_Mt090430 20090702
          Length = 492

 Score =  276 bits (706), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 138/189 (73%), Positives = 158/189 (83%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           S  ++ LEIL+ SGSS+EKKQA +IIP+V+K HQLLVTLLL NA  MEALPI L KI +P
Sbjct: 61  SQKIINLEILKLSGSSSEKKQAEIIIPLVEKSHQLLVTLLLFNALTMEALPIFLYKITNP 120

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           F+A+++SVT VL  GE+IPQAICSR GL VGA F WLVRILMIICYPI+ P+GK LD  L
Sbjct: 121 FLAIIVSVTCVLFIGEIIPQAICSRNGLAVGAYFAWLVRILMIICYPISCPVGKALDYLL 180

Query: 121 GHSDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTFS 180
           GH  ALF RAQ+K  VSIHG+EAG GGELT DETTII+GALDLT+KT E+AMTPIESTFS
Sbjct: 181 GHDKALFGRAQIKTFVSIHGKEAGIGGELTLDETTIINGALDLTQKTVEKAMTPIESTFS 240

Query: 181 LDVNSKLDW 189
           LDVNSKLDW
Sbjct: 241 LDVNSKLDW 249


>IMGA|Medtr4g122040.1 CBS chr04_pseudomolecule_IMGAG_V3
           28810497-28805610 E EGN_Mt090430 20090702
          Length = 425

 Score =  251 bits (640), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 119/189 (62%), Positives = 154/189 (81%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SL LV+LE+L +SG+  ++K A  I+PVV+ QH LL TLL+CNA AMEALPI LD +   
Sbjct: 38  SLSLVDLEVLAKSGTPNDRKHAVKILPVVRNQHLLLCTLLICNAAAMEALPIFLDSLVTA 97

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE+IPQ++CSRYGL +GA+    VR+L+ ICYP+A+PI K+LD  L
Sbjct: 98  WGAILISVTLILLFGEIIPQSVCSRYGLAIGASVTPFVRVLVWICYPVAFPISKLLDYLL 157

Query: 121 GH-SDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           GH ++ALFRRA+LK LV +HG EAGKGGELTHDETTII+GAL+L+EKTA +AMTPI  TF
Sbjct: 158 GHRNEALFRRAELKTLVDLHGNEAGKGGELTHDETTIIAGALELSEKTASDAMTPISETF 217

Query: 180 SLDVNSKLD 188
           ++D+NSKLD
Sbjct: 218 AIDINSKLD 226


>IMGA|Medtr2g010580.1 CBS chr02_pseudomolecule_IMGAG_V3
           2604908-2601901 E EGN_Mt090430 20090702
          Length = 429

 Score =  244 bits (624), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 118/189 (62%), Positives = 152/189 (80%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           SL LV+LE+L +SG+  ++K A  I+PVV+ QH LL TLL+CNA AMEALPI LD +   
Sbjct: 38  SLSLVDLEVLAKSGTPQDRKHAEKILPVVKNQHLLLCTLLICNAAAMEALPIFLDSLVVA 97

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           + A+L+SVT +L FGE+IPQ++CSRYGL +GA    +VR+L+ IC P+AYPI K+LD  L
Sbjct: 98  WGAILISVTLILLFGEIIPQSVCSRYGLTIGATVAPIVRVLVWICLPVAYPISKLLDYLL 157

Query: 121 GH-SDALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           GH  +ALFRRA+LK LV++HG EAGKGGELTHDETTII+GAL+L+EKTA +AMTPI   F
Sbjct: 158 GHRQEALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELSEKTAGDAMTPINEIF 217

Query: 180 SLDVNSKLD 188
           S+D+NSKL+
Sbjct: 218 SIDINSKLN 226


>IMGA|Medtr6g062220.1 Protein of unknown function DUF21
           chr06_pseudomolecule_IMGAG_V3 11310012-11306967 H
           EGN_Mt090430 20090702
          Length = 282

 Score =  192 bits (488), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 98/189 (51%), Positives = 128/189 (67%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           S   V+LE+L + G   EK+ A  I P V+  H +L TLLL  + AMEALPI +D I   
Sbjct: 39  SYSQVDLEVLIKGGRPKEKRNAERIQPFVKNGHFVLCTLLLGKSLAMEALPIFMDLIIPS 98

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           +  +L+S   V  F E++PQA+CSRYGL  GAN      +L++I +PI YP  K+LD AL
Sbjct: 99  WYTILMSAPLVTVFAEILPQAVCSRYGLTFGANLAPFTHLLLLIFFPITYPASKLLDWAL 158

Query: 121 GHSDA-LFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           G   + L RR++LK  V +H  EAGKGGEL+H ET+II+GA+DLT+KTA +AMT I  TF
Sbjct: 159 GKEHSVLLRRSELKTFVDLHADEAGKGGELSHHETSIITGAMDLTQKTAIDAMTHISETF 218

Query: 180 SLDVNSKLD 188
           SLD+NSKLD
Sbjct: 219 SLDINSKLD 227


>IMGA|Medtr6g062600.1 CBS chr06_pseudomolecule_IMGAG_V3
           11503259-11510669 E EGN_Mt090430 20090702
          Length = 476

 Score =  186 bits (471), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 95/189 (50%), Positives = 132/189 (69%), Gaps = 1/189 (0%)

Query: 1   SLGLVELEILQRSGSSTEKKQAAVIIPVVQKQHQLLVTLLLCNACAMEALPICLDKIFHP 60
           S   V+LE+L ++G    +K AA I+ +V+ +H +L TLL+  + A+E + + ++K+F  
Sbjct: 44  SFSQVDLEVLVKAGQPHIQKNAAKIMSIVKNEHLVLCTLLMAKSLALEGVSVLMEKMFPE 103

Query: 61  FVAVLLSVTFVLAFGEVIPQAICSRYGLFVGANFVWLVRILMIICYPIAYPIGKILDAAL 120
           +VAVLL+   +    EVIPQA+ SRYGL  GA     VR+L+++ +P AYP+ K+LD  L
Sbjct: 104 WVAVLLATALISIIAEVIPQALNSRYGLRFGATMSPFVRVLLLLFFPFAYPVSKLLDCLL 163

Query: 121 GHSD-ALFRRAQLKALVSIHGQEAGKGGELTHDETTIISGALDLTEKTAEEAMTPIESTF 179
           G    AL  R +LK LV++H  EAGKGGELT  ETTII+GALDLT KTA++AMTP+  TF
Sbjct: 164 GKGHTALLGREELKTLVNLHANEAGKGGELTLHETTIIAGALDLTMKTAKDAMTPLSETF 223

Query: 180 SLDVNSKLD 188
           SLD+NSKLD
Sbjct: 224 SLDINSKLD 232