Jatropha Genome Database
- JcCA0066701.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0066701.20 + phase: 1 /TE/partial
(800 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse transc... 405 e-113
IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse transc... 236 4e-62
IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse transc... 216 3e-56
IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse transc... 210 3e-54
IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse transcri... 204 1e-52
IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse transcri... 200 2e-51
IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse transc... 198 9e-51
IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse transc... 187 2e-47
IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse transc... 186 5e-47
IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse transc... 177 2e-44
IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse transc... 157 2e-38
IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse transc... 148 8e-36
IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse transc... 144 1e-34
IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse transcri... 144 2e-34
IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putat... 141 1e-33
IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse transc... 141 1e-33
IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse transc... 140 4e-33
IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse transc... 139 7e-33
IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase... 138 1e-32
IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse transc... 127 2e-29
IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse transc... 125 1e-28
IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse transc... 123 3e-28
IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse transc... 123 3e-28
IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase chr04_... 118 9e-27
IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse transc... 113 4e-25
IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse transc... 112 7e-25
IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse transc... 110 4e-24
IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse transc... 107 3e-23
IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H... 105 1e-22
IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse transc... 104 2e-22
IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse transc... 103 4e-22
IMGA|Medtr2g114260.1 hypothetical protein chr02_pseudomolecule_I... 92 1e-18
IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse transc... 91 3e-18
IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse transc... 89 7e-18
IMGA|Medtr4g013050.1 hypothetical protein chr04_pseudomolecule_I... 89 9e-18
IMGA|Medtr4g012970.1 hypothetical protein chr04_pseudomolecule_I... 89 9e-18
IMGA|Medtr5g009520.1 RNA-directed DNA polymerase (reverse transc... 87 4e-17
IMGA|AC225611_8.1 contains similarity to reverse trancriptase, r... 87 4e-17
IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase... 87 4e-17
IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse transc... 86 7e-17
IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse transcrip... 86 1e-16
IMGA|Medtr8g105650.1 reverse transcriptase, putative; 100033-105... 85 1e-16
IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase... 84 2e-16
IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse transc... 79 1e-14
IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putat... 78 1e-14
IMGA|Medtr8g024620.1 hypothetical protein chr08_pseudomolecule_I... 77 2e-14
IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse transc... 77 5e-14
IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750, ... 75 9e-14
IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse transcrip... 74 2e-13
IMGA|CU179634_33.1 RNA-directed DNA polymerase (Reverse transcri... 71 3e-12
IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, relat... 69 9e-12
IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H... 68 1e-11
IMGA|AC235669_13.1 RNA-directed DNA polymerase (Reverse transcri... 68 2e-11
IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750, ... 66 7e-11
IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse transc... 66 8e-11
IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse transc... 64 2e-10
IMGA|Medtr1g009630.1 RNA-directed DNA polymerase, related chr01_... 63 7e-10
IMGA|Medtr1g089700.1 reverse transcriptase, putative; 16838-2026... 62 9e-10
IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse transc... 62 1e-09
IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse transc... 62 2e-09
IMGA|Medtr1g107130.1 hypothetical protein chr01_pseudomolecule_I... 62 2e-09
IMGA|Medtr2g010180.1 RNA-directed DNA polymerase (reverse transc... 59 7e-09
IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse transc... 59 8e-09
IMGA|Medtr1g087030.1 RNA-directed DNA polymerase (Reverse transc... 59 1e-08
IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse transc... 59 1e-08
IMGA|Medtr4g160710.1 RNA-directed DNA polymerase, related, putat... 58 2e-08
IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse transc... 58 2e-08
IMGA|Medtr7g089950.1 hypothetical protein chr07_pseudomolecule_I... 58 2e-08
IMGA|Medtr3g162890.1 RNA-directed DNA polymerase (reverse transc... 57 3e-08
IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse transc... 56 6e-08
IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V... 53 6e-07
IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse transc... 53 6e-07
IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse transc... 53 7e-07
IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease ... 53 7e-07
IMGA|Medtr1g071160.1 RNA-directed DNA polymerase, putative chr01... 52 8e-07
IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse transc... 52 8e-07
IMGA|Medtr3g097880.1 RNA-directed DNA polymerase (reverse transc... 52 9e-07
IMGA|Medtr3g030650.1 RNA-directed DNA polymerase (reverse transc... 52 2e-06
IMGA|Medtr1g064980.1 RNA-directed DNA polymerase ; Ribonuclease ... 50 6e-06
>IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse
transcriptase); Hemopexin; Polynucleotidyl transferase,
Ribonuclease H fold chr02_pseudomolecule_IMGAG_V3
27457173-27452820 H EGN_Mt090430 20090702
Length = 1147
Score = 405 bits (1042), Expect = e-113, Method: Compositional matrix adjust.
Identities = 248/624 (39%), Positives = 343/624 (54%), Gaps = 57/624 (9%)
Query: 181 RPFRVDNSWLVEDELELVVRRGWEESVNLNFISRRDALIFYVNRWGRA---RNREFWKRR 237
R FR +NSWLVE EL+ VV GW VN I+R +++WGR+ R +E ++
Sbjct: 95 RQFRFENSWLVEPELDSVVHDGWFHDVNEPMITRLQHCTEELDQWGRSLRKRYKEDIQKC 154
Query: 238 NLIVRQIELDRDLYGGSWSARLKEEWNKILLTEEIRKKQQAKLFWFKYGDKNSKYFHXXX 297
I+ +++ D+ LKE+ N +L+ E+ KQ+AK+FW K GD N+K+FH
Sbjct: 155 KDIIEELQGLGDVETDGEIVLLKEKLNLLLIQEDTFWKQRAKIFWMKDGDMNAKFFHAAA 214
Query: 298 XXXXXXXXXXXXXXSDGFVTSNHGEMEVLVKDYFSELFRAERQPDRSSLLRLFQKRVTDS 357
K+ ++LF E + + +
Sbjct: 215 TSRKQ-------------------------KNKITKLFNDEDA---------VAECLNEE 240
Query: 358 DAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGNAIVLNAVDWLQRGI 417
D L+APF +EFR+ +F M DKAPGPDGLNP F +++W + G +V WL G
Sbjct: 241 DNQFLIAPFTDEEFRDAIFQMQSDKAPGPDGLNPTFYKRFWTLCGEEVVAACRRWLHEGN 300
Query: 418 FPSDLSLTNIVLILKIHVPDNSYTXSITLRISEIEEVSXNCERLSTYSLMXCYIXNCLXS 477
P+ L TNIVLI K P T+R ++ +S C + Y ++ + N L
Sbjct: 301 LPTALGDTNIVLIPKCDHPR-------TMR--DLRPIS-LCNVV--YKILAKTLANRLQR 348
Query: 478 LSEXAXEGVASYYFYEPVCFCAX-PITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKA 536
+ + E F A ITDN+ +A E IH LK + G G ALKIDISK
Sbjct: 349 V-------LDKCISVEQSGFVAGRTITDNILIALEIIHYLKCKTWGIKGEAALKIDISKT 401
Query: 537 YDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPIS 596
YDRV W+YL +M +GF WI+W +N VGPI P RGLRQGDP+S
Sbjct: 402 YDRVDWNYLFSIMEKMGFNPIWIKWMRMSVTMVSYHVLVNDDRVGPIYPGRGLRQGDPLS 461
Query: 597 PYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVK 656
PYLF+LCAEG+S L + AE ++HG +V + P VSHLLFA+DS FF+AN +E +K
Sbjct: 462 PYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALK 521
Query: 657 SILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRD 716
IL Y S Q +N QKS FS V + +SN+L V IG YLGLPS+IGR
Sbjct: 522 DILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRS 581
Query: 717 KKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQV 776
KK IF++IKDR+W +++ +++ LS+ G+EVLIKSVAQAIP+YCM VFLLP ++ +++
Sbjct: 582 KKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEK 641
Query: 777 IMNCYWWNGKKEQGRGINWLSWER 800
++N +WW K E GI W+SWER
Sbjct: 642 MLNSFWWGMKNEGRGGIRWMSWER 665
>IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3 86385-88912
E EGN_Mt090430 20090702
Length = 566
Score = 236 bits (601), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 114/220 (51%), Positives = 151/220 (68%), Gaps = 1/220 (0%)
Query: 580 VGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFAN 639
VGPI P RGLRQGDP+SPYLF+L EGLS L R IHG +V RG P VSHLLFA+
Sbjct: 4 VGPIVPGRGLRQGDPLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFAD 63
Query: 640 DSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNILGVRG 699
+ F +AN EA + +IL YEA SGQ +N KS FS +S +D+S I+GVR
Sbjct: 64 NCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRH 123
Query: 700 SIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAY 759
+G YLGLPS+I RDK +FSFIKD +WK++N W R LS+ G+EV+IKSV Q+IP+Y
Sbjct: 124 VMGTGKYLGLPSMIDRDKWSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSY 183
Query: 760 CMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWE 799
M ++LLPS++ +++ ++N +WW G+ RGI W++WE
Sbjct: 184 IMSIYLLPSSVIDDIEKMVNAFWWGGRSNN-RGIKWMAWE 222
>IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
29296065-29298854 H EGN_Mt090430 20090702
Length = 693
Score = 216 bits (551), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 125/301 (41%), Positives = 175/301 (58%), Gaps = 25/301 (8%)
Query: 502 ITDNVCVAFETIHNLK-NRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQ 560
I DN +A E IH++K ++R D ALK+DISKAYDR+ W YL +V+ +G+ WI+
Sbjct: 110 ILDNAMIAIEVIHHMKISKRLRDKN-VALKLDISKAYDRIDWLYLKEVVIKIGYANRWIR 168
Query: 561 WXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLI 620
W +N VGPI P GLRQGDP+SPYLF+LCAEGLSAL AE R I
Sbjct: 169 WIMMCVESVDYSVIVNNESVGPIFPGEGLRQGDPLSPYLFILCAEGLSALIHQAERRGDI 228
Query: 621 HGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYE-ARSGQAVNFQKSGTLF 679
HG + P +SHLLFAND FF A E ++K+IL YE A + + F+ +
Sbjct: 229 HGISICTNSPIISHLLFANDCFLFFMAEEREVGVMKNILETYEKALLVKQLAFRNMKFI- 287
Query: 680 SPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRF 739
I+GV ++ + L LPSL+ ++ DR+W K+N W+++
Sbjct: 288 --------------IVGVFPTLLKT--LSLPSLVSALLWEL-----DRIWHKINCWSSKC 326
Query: 740 LSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWE 799
LS+ REVL+KSV Q+IP+Y M V+LLP+ L ++ I+N +WW +G++WLSW+
Sbjct: 327 LSKAEREVLMKSVLQSIPSYIMSVYLLPNKLVDAIEKIINAFWWGHGGTTRKGLHWLSWK 386
Query: 800 R 800
R
Sbjct: 387 R 387
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%)
Query: 375 LFSMHPDKAPGPDGLNPAFLQKYWHIMGNAIVLNAVDWLQRGIFPSDLSLTNIVLILK 432
++SMHPDK GPDG NP F QK+W + + I WL FP L+ TNI LI K
Sbjct: 1 MYSMHPDKCLGPDGFNPGFFQKFWSVCNSDIFSECCSWLNNNQFPPSLNSTNIALIPK 58
>IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse
transcriptase); Polynucleotidyl transferase,
Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3
15868030-15871357 E EGN_Mt090430 20090702
Length = 845
Score = 210 bits (534), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 110/246 (44%), Positives = 148/246 (60%), Gaps = 14/246 (5%)
Query: 502 ITDNVCVAFETIHNLK-NRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQ 560
I DN +A E +H++K +R D ALK+DISKAYDR+ W YL +VM +GF + W+Q
Sbjct: 233 ILDNAMIAIEVVHHMKVGKRVRDKNV-ALKLDISKAYDRIDWLYLKEVMLKMGFDSKWVQ 291
Query: 561 WXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLI 620
+N GDP+SPYLF+LC EGLSAL R AE +
Sbjct: 292 QIMMCVETVDYSVIVNN------------ELGDPLSPYLFILCDEGLSALIRKAERSGDL 339
Query: 621 HGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFS 680
HG + P +SHLLFA+D FFK + +EA ++K+IL YE SGQ ++ K FS
Sbjct: 340 HGVSICTNAPTISHLLFADDCFLFFKVDDNEAQVMKNILHTYELASGQTISLPKYEVFFS 399
Query: 681 PCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFL 740
V + + I+NILGVR +G YLGLPS++GR K+ F FIKDR+W K+NSW+++ L
Sbjct: 400 TVVPLPLKETITNILGVRAVMGTGKYLGLPSMVGRSKEATFGFIKDRIWHKINSWSSKCL 459
Query: 741 SRVGRE 746
S+VGRE
Sbjct: 460 SKVGRE 465
Score = 103 bits (256), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 93/184 (50%), Gaps = 8/184 (4%)
Query: 222 VNRWGRARNREFWKRRNLIVRQIELDRDLYGGSWS-----ARLKEEWNKILLTEEIRKKQ 276
+N W +A N + + R +L+R G+ + L++ +++ E+ +Q
Sbjct: 14 LNSWSKAHNNGLKQEIDNCRR--DLNRCQSQGAAADPSLLTNLRKRMTHLMIQEDKYWRQ 71
Query: 277 QAKLFWFKYGDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTSNHGEMEVLVKDYFSELFR 336
+AK W++ GD N+K+FH +G ++ M + K+YF LF
Sbjct: 72 RAKTHWYRDGDLNTKFFHASATSRKKVNRINFLDNDEGVRIADEQGMSQVAKEYFETLF- 130
Query: 337 AERQPDRSSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQK 396
E R+ ++ + +K V+ D L APF+ +EF++ +FSMHPDK PGPDG NP F Q+
Sbjct: 131 LESNSTRAPVVNIIEKVVSGDDNIMLTAPFQAEEFKDAMFSMHPDKCPGPDGFNPGFFQQ 190
Query: 397 YWHI 400
W I
Sbjct: 191 LWPI 194
>IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233685.2 242381-241350 H EGN_Mt090430
20090702
Length = 268
Score = 204 bits (520), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 148/252 (58%), Gaps = 19/252 (7%)
Query: 549 MHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLS 608
M +G ++W +NG V PI P RGLRQGDP+SPYLF++C EGLS
Sbjct: 1 MRRMGLHDILVKWMSMCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLS 60
Query: 609 ALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQ 668
A + AE R IHG ++ RG ++HLLFA+D F KAN E+ +K IL YEA S Q
Sbjct: 61 AQLKKAEARVDIHGVKLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQ 120
Query: 669 AVNFQKSGTLFSPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRL 728
A+NF+K +FS S+ D + + R K++ F +++D +
Sbjct: 121 AINFRKP-EIFSKNTSE--ADRSQSKMSYR----------------YKKRENFGYLRDGV 161
Query: 729 WKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKE 788
W+K+ W + LS+ GREVLIK V QAIP YCM FLLP+TL E+Q+++N +WW +
Sbjct: 162 WRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSFWWGLNRR 221
Query: 789 QGRGINWLSWER 800
QG+GI+WLSW++
Sbjct: 222 QGKGIDWLSWDK 233
>IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233572.2 97249-98280 H EGN_Mt090430
20090702
Length = 258
Score = 200 bits (508), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/252 (40%), Positives = 143/252 (56%), Gaps = 29/252 (11%)
Query: 549 MHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLS 608
M +G ++W +NG V PI P RGLRQGDP+SPYLF++C EGLS
Sbjct: 1 MRRMGLHDILVKWMSMCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLS 60
Query: 609 ALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQ 668
A + AE R IHG ++ RG ++HLLFA+D F KAN E+ +K IL YEA S Q
Sbjct: 61 AQLKKAEARVDIHGVKLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQ 120
Query: 669 AVNFQKSGTLFSPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRL 728
A+NF+K +FS S+ ++ F +++D +
Sbjct: 121 AINFRKP-EIFSKNTSE----------------------------ADRSQENFGYLRDGV 151
Query: 729 WKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKE 788
W+K+ W + LS+ GREVLIK V QAIP YCM FLLP+TL E+Q+++N +WW +
Sbjct: 152 WRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSFWWGLNRR 211
Query: 789 QGRGINWLSWER 800
QG+GI+WLSW++
Sbjct: 212 QGKGIDWLSWDK 223
>IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
34193929-34195112 H EGN_Mt090430 20090702
Length = 373
Score = 198 bits (503), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 105/235 (44%), Positives = 139/235 (59%), Gaps = 22/235 (9%)
Query: 501 PITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQ 560
PI DN VA E +H +K++ G G ALK+DISKAYDR+ W YL +VM +GF W+
Sbjct: 160 PILDNAMVAIEVVHYMKSKTKGKKGNVALKLDISKAYDRIDWLYLKEVMIKMGFCHRWVN 219
Query: 561 WXXXXXXXXXXXXXLNGIPVGP-ISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRL 619
W +N VGP I P RGL+QGDP+SPYLF+LC EGLSAL R AE R
Sbjct: 220 WIMMCIETVDYSVLVNQKLVGPPIIPGRGLQQGDPLSPYLFILCVEGLSALIRQAEARGE 279
Query: 620 IHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLF 679
+HG +V + EA +K+IL YE SGQA++ KS +
Sbjct: 280 LHGAKV---------------------STETEAHTMKTILAIYEVASGQAISLPKSEIYY 318
Query: 680 SPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNS 734
S + ++I++ILGV+ +G S YLGLPS+IGR KK F+FIKDR+W+K+N+
Sbjct: 319 SRNTGADVQNNITSILGVQAVLGTSKYLGLPSMIGRSKKSTFNFIKDRVWQKINA 373
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 323 MEVLVKDYFSELFRAERQPDRSSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDK 382
M + K YF ELFRA +Q R ++ + K +++ D L PF +EF+E +FSM +K
Sbjct: 1 MASVAKCYFDELFRA-KQSTRDPVINVINKVISEEDNHQLTTPFLIEEFKEAMFSMQAEK 59
Query: 383 APGPDGLNPAFLQKYWHIMGNAIVLNAVDWLQRGIFPSDLSLTNIVLILK 432
PGPDG NP F Q +W + I WL+ G P+ L+ TNI LI K
Sbjct: 60 CPGPDGFNPGFYQHFWQLCSPDIFRECCSWLESGQLPASLNSTNIALIPK 109
>IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
11971058-11973594 E EGN_Mt090430 20090702
Length = 628
Score = 187 bits (475), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 153/566 (27%), Positives = 249/566 (43%), Gaps = 46/566 (8%)
Query: 227 RARNREFWKRRNLIVRQIELDRDLYG-GSWSARLKEEWNKILLTEEIRKKQQAKLFWFKY 285
+ + +EF R N I R+I R G +L++E ++I EE+ Q+++ W
Sbjct: 95 KKKKKEFMARLNGIQRRIRNGRGHSGLMRLKRKLQKEMSRIFQQEELMWFQRSRAKWLVD 154
Query: 286 GDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTSNHGEMEVLVKDYFSELFRAERQPDRSS 345
GD+N++Y+H DG E++ +V Y+ ELF
Sbjct: 155 GDRNTRYYHLKTVQRRRRNKIIMLRNVDGHWVEIVEEVKDMVNKYYYELFTTNVDTSEWF 214
Query: 346 LLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGNAI 405
L R+ L P +E R +FSM P KAPGPDG F QK W I+G
Sbjct: 215 QTSLAFPRLDLETLEILRHPLVDEEIRSAVFSMTPWKAPGPDGFPAGFYQKSWSIIGK-- 272
Query: 406 VLNAVDWLQR----GIFPSDLSLTNIVLILKIHVPDNSYTXSITLRISEIEEVSXNCERL 461
N D++++ ++++ TNI LI K+ P +++ +S C
Sbjct: 273 --NTCDFIKKLWCSPEQLAEINSTNICLIPKVQDPQF---------VNQFRPIS-LCN-- 318
Query: 462 STYSLMXCYIXNCLXSLSEXAXEGVASYYFYEPVCFCAXPITDNVCVAFETIHNLKNRRC 521
+ Y ++ I N L E V+ + + I +N+ VA E IH C
Sbjct: 319 TVYKILSKVIVN---RLKNCVAEIVSPF---QTGFIPGRSIHENIVVAQEMIH------C 366
Query: 522 GDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVG 581
G + YD +SW+++ + +G P I NG
Sbjct: 367 GS----------RQTYDNLSWNFIHMTLLEVGLPMEMINVIMHSVTTVRTNVRWNGNRAD 416
Query: 582 PISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDS 641
+P +GLRQGDPISPYLF++C + LS L +A ++ + GR P +SHL+FA+D
Sbjct: 417 FFTPKKGLRQGDPISPYLFVICMDKLSHLISEAIDKGDWLDLKTGRTGPMISHLMFADDL 476
Query: 642 IFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNILGVRGSI 701
+ F +A + V +L + GQ+++ QK+ FS V + + +I G R +
Sbjct: 477 LLFGQATDSQMRGVMEVLNKFCHLLGQSISIQKTTIFFSSNVYRVTRRLLVDISGFRETT 536
Query: 702 GDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCM 761
YLG+P +++ F ++ + + KL +W + S GR L KSV +AIP M
Sbjct: 537 ELGKYLGVPLTGKAPRRKDFQYLVNEVRNKLTAWKSNQFSFAGRVTLAKSVIEAIP---M 593
Query: 762 LVFLLPSTLCHELQVIMNCYWWNGKK 787
+ ++P E+Q + + W K+
Sbjct: 594 MNSVVPKAYVQEIQKVQRAFIWGDKE 619
>IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
5513052-5515983 E EGN_Mt090430 20090702
Length = 591
Score = 186 bits (471), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 117/293 (39%), Positives = 147/293 (50%), Gaps = 46/293 (15%)
Query: 358 DAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGNAIVLNAVDWLQRGI 417
D L +P K+E R LF MHPDK+P PDG NPAF Q++WH+ G+ I V WL RG
Sbjct: 3 DNTMLTSPVTKEELRRALFQMHPDKSPSPDGFNPAFYQRFWHVCGDDIFQAVVSWLDRGY 62
Query: 418 FPSDLSLTNIVLILKIHVPDNSYTXSITLR-ISEIEEVSXNCERLSTYSLMXCYIXNCLX 476
FP++L+ TNI LILK PDN LR IS + +L L C + C+
Sbjct: 63 FPTNLTKTNICLILKCEDPDNMKD----LRPISLCNVLYKMVSKLLANRLKRC-LDKCVS 117
Query: 477 SLSEXAXEGVASYYFYEPVCFCAXPITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKA 536
EG + I DN + E IH++K + G G ALKIDI+KA
Sbjct: 118 EEQSAFVEGRS--------------ILDNALITTEIIHSMKRKTKGWRGELALKIDINKA 163
Query: 537 YDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPIS 596
YD+V W +L V+ +GF WIQW + GDP+S
Sbjct: 164 YDKVGWGFLRGVLMRMGFNEKWIQWM--------------------------MMCGDPLS 197
Query: 597 PYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANA 649
PYLF+L EGLS L A R IHG +V RG P VSHLLFA+D F +AN
Sbjct: 198 PYLFILVDEGLSTLIHKAVNRGDIHGIQVCRGAPVVSHLLFADDYFLFCRANV 250
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 58/75 (77%), Gaps = 1/75 (1%)
Query: 726 DRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNG 785
DR+WK++N+W R LS+ G+EV+IKSV Q+IP+Y M ++L+PS++ +++ ++N +WW G
Sbjct: 251 DRIWKRINAWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLMPSSVIDDIEKMINAFWWGG 310
Query: 786 KKEQGRGINWLSWER 800
+ RGI W++WER
Sbjct: 311 -RSNNRGIKWMAWER 324
>IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse
transcriptase); Histone H2B; Histone-fold;
Polynucleotidyl transferase, Ribonuclease H fold
chr01_pseudomolecule_IMGAG_V3 17931605-17934389 E
EGN_Mt090430 20090702
Length = 802
Score = 177 bits (448), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 132/249 (53%), Gaps = 1/249 (0%)
Query: 552 LGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALF 611
+GFP ++ + G P P RGLRQGDP+SPYLF+LCAE LS L
Sbjct: 1 MGFPPNLVKTIMNCVTTVSFSVLIIGKPSNKFYPQRGLRQGDPLSPYLFILCAEVLSGLL 60
Query: 612 RDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVN 671
HG ++ P +SHL FA+DS+FF ++ EA + L Y+ SGQ VN
Sbjct: 61 TKGLADGKFHGIQIAPTAPPISHLFFADDSLFFCRSEPKEANFLMDTLQLYQDMSGQKVN 120
Query: 672 FQKSGTLFSPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKK 731
KS +F+P + + I D L + S + YLGLP+ GR K Q F++I D++ KK
Sbjct: 121 LDKSKMVFNPSLREDIKKDFQVQLPINISNKITKYLGLPTQFGRSKVQDFNYIMDKVIKK 180
Query: 732 LNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGR 791
+ W R LS GR VLIK+V QAI + M FLLP C ++ + +WW G +
Sbjct: 181 MKGWKERNLSFAGRSVLIKAVVQAIHVFVMSCFLLPQETCDNIERAVCKFWW-GSNGDNK 239
Query: 792 GINWLSWER 800
I+W+ ++
Sbjct: 240 KIHWVKKDK 248
>IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
26299553-26300277 H EGN_Mt090430 20090702
Length = 207
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/196 (46%), Positives = 111/196 (56%), Gaps = 18/196 (9%)
Query: 502 ITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQW 561
I DN +A E IH++K + G G ALKIDISKAYDRV YL V+ +GF
Sbjct: 30 ILDNTLIATEIIHSVKRKTNGWRGELALKIDISKAYDRVDGGYLRGVLMRMGF------- 82
Query: 562 XXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIH 621
+N VGPI P RGLRQ DP+SPYLF+L AEGLS L A R IH
Sbjct: 83 -----------MLMNFDRVGPIVPGRGLRQADPLSPYLFILVAEGLSTLIHKAVNRGGIH 131
Query: 622 GCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSP 681
G +V G P VSHLLFA+D F +AN EA + +IL YE SGQ +N KS FS
Sbjct: 132 GVQVCCGAPLVSHLLFADDCFLFCRANVVEAQRLLTILKTYEVASGQEINLSKSEVFFSR 191
Query: 682 CVSQHIVDDISNILGV 697
+S +D+S I+GV
Sbjct: 192 NMSGAAQEDLSRIIGV 207
>IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
23554745-23554236 H EGN_Mt090430 20090702
Length = 169
Score = 148 bits (374), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 97/140 (69%)
Query: 575 LNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSH 634
+NG VGPI+P RGLRQGDP+SPYLF+LCAEGLSAL R AE R IHG +V RG P ++H
Sbjct: 14 VNGESVGPINPKRGLRQGDPLSPYLFILCAEGLSALLRRAETRGDIHGVKVCRGAPLLTH 73
Query: 635 LLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNI 694
LLFA D F +++ + T +K +L YE+ +GQA++F+KS F SQ I N+
Sbjct: 74 LLFAYDCFLFCRSSIMKCTKIKEVLHVYESVTGQAIHFEKSEIFFGKNTSQADRKAIKNL 133
Query: 695 LGVRGSIGDSFYLGLPSLIG 714
L V ++G+ YLG+PS++G
Sbjct: 134 LQVSANMGNGKYLGMPSMVG 153
>IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
12119249-12120974 H EGN_Mt090430 20090702
Length = 477
Score = 144 bits (364), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 118/220 (53%), Gaps = 2/220 (0%)
Query: 581 GPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFAND 640
G P LRQGDP+SPYLF++C E LS + +A + + R P +SHL FA+D
Sbjct: 13 GQKRPIGRLRQGDPLSPYLFVMCMENLSHMILEAVDDSRWKPVTLSRNGPPLSHLFFADD 72
Query: 641 SIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNILGVRGS 700
+ F KA + +++ + + SG VN KS FS V+ ++ + ++ G+ +
Sbjct: 73 VLLFSKATVSQVRVMEDVFTKFAGTSGLKVNTSKSRAFFSNVVTHSKINTMVSVTGIHNT 132
Query: 701 IGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYC 760
YLG P GR K+ + F+ D++ L SW N+ L++ GR L KSV AIP Y
Sbjct: 133 SSLDKYLGFPIFHGRMKRVDYDFLIDKVQSCLASWKNKLLNKAGRLTLAKSVLNAIPTYY 192
Query: 761 MLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWER 800
M + P ++C++L + + W G G+G++ +SW++
Sbjct: 193 MQISWTPQSICNQLDKMTRKFIWKG--TDGKGVHLVSWDK 230
>IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse
transcriptase); Endonuclease/exonuclease/phosphatase
AC233655.2 202219-200303 H EGN_Mt090430 20090702
Length = 567
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/273 (32%), Positives = 130/273 (47%), Gaps = 4/273 (1%)
Query: 167 VVIDLXPNEYHNYVRPFRVDNSWLVEDELELVVRRGWEESVNLNFISRRDALIFYVNRWG 226
++++ P Y R FR +N+WLVE EL +V GW + R +++WG
Sbjct: 163 ILLNTDPKVYEYKRRQFRFENAWLVEPELPSIVSDGWMRGQADPLLDRLALCTEELDQWG 222
Query: 227 RA---RNREFWKRRNLIVRQIELDRDLYGGSWSARLKEEWNKILLTEEIRKKQQAKLFWF 283
R+ R +E K+ + +++ + LKE N +L+ EE KQ+AK FW
Sbjct: 223 RSLRRRYKEDIKKCKKRIAELQTLSNNEADIEVVSLKERLNLLLIQEETFWKQRAKSFWL 282
Query: 284 KYGDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTSNHGEMEVLVKDYFSELFRAERQPDR 343
+ GD NSK+FH D + ++ L +YFS LF A +
Sbjct: 283 RDGDMNSKFFHAAATSRKQRNKITKLMKDDNTKVTTQEDICTLSLEYFSNLF-APTPCNT 341
Query: 344 SSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGN 403
+L+ + D L PFR DEFR+ +F MH DKAPG DGLNPAF +++ + G
Sbjct: 342 HPVLQAVAPCINAEDNNLLTTPFRDDEFRDVVFQMHSDKAPGSDGLNPAFYKRFSALCGG 401
Query: 404 AIVLNAVDWLQRGIFPSDLSLTNIVLILKIHVP 436
++ WL G P+ L TNIVLI K P
Sbjct: 402 EVIKACKQWLNLGYLPTALGETNIVLIPKCEHP 434
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 528 ALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPAR 587
AL + +A D+ ++YL ++ +GF + WI W +N VGP+ P R
Sbjct: 456 ALANRLQRALDK--FEYLFSILEKMGFNSVWINWMHMCVTNVKYHILVNDEIVGPVIPGR 513
Query: 588 GLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDS 641
GLRQGDP+SPYLF+LCA G+++L + AE ++HG +V P +SHLLFA+DS
Sbjct: 514 GLRQGDPLSPYLFILCAGGMTSLIKQAERNNILHGIKVCCIAPAISHLLFADDS 567
>IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 4275704-4277642 H
EGN_Mt090430 20090702
Length = 171
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 93/142 (65%)
Query: 620 IHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLF 679
I G + R P VSHLLFA+D F +A +E + SIL +YE SGQ VN KS F
Sbjct: 10 IPGIKNFRRGPAVSHLLFADDCFIFCRAKVNEVQHLISILREYEEASGQQVNLAKSEVFF 69
Query: 680 SPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRF 739
+SQ D++NILGV+ ++G YLGLPS++GR KK F +IKD++W+K+NSW R
Sbjct: 70 GNNMSQAAKQDLANILGVKHALGTGTYLGLPSMVGRSKKATFGYIKDKIWRKINSWRGRS 129
Query: 740 LSRVGREVLIKSVAQAIPAYCM 761
LS+ G+E +IKSV Q IP+Y M
Sbjct: 130 LSKSGKETMIKSVLQLIPSYIM 151
>IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
12585358-12584747 H EGN_Mt090430 20090702
Length = 203
Score = 141 bits (356), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 105/201 (52%)
Query: 508 VAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXX 567
+ E +H++K + ALK+ I K Y + YL +VM L F W++W
Sbjct: 2 IVIEVVHHMKISKRSRDKNVALKLYIGKGYVCIDRLYLKEVMQKLEFANRWVRWIMMCVE 61
Query: 568 XXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGR 627
+N VGPI RGLRQGDP+SPYLF+LCAEG AL E R +H +
Sbjct: 62 TDDYSVIVNNESVGPIFLGRGLRQGDPLSPYLFILCAEGHLALIHKGEWREDMHDISICT 121
Query: 628 GCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHI 687
P +SHLLFA+D FF N EA M+K IL YEA S QA+N KS ++ VS +
Sbjct: 122 NAPVISHLLFADDCFLFFWLNEIEAHMMKHILEIYEAVSSQAINLPKSEVYYNHNVSAPL 181
Query: 688 VDDISNILGVRGSIGDSFYLG 708
D I+ L VR +G YL
Sbjct: 182 KDFITTTLDVRAVMGTGKYLN 202
>IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr01_pseudomolecule_IMGAG_V3 1684225-1680716 E
EGN_Mt090430 20090702
Length = 659
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/224 (35%), Positives = 117/224 (52%), Gaps = 5/224 (2%)
Query: 576 NGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHL 635
NG + P RGLRQGDP+SPYLF+LC E LS + ++ ++ R P SHL
Sbjct: 14 NGEKLDSFKPKRGLRQGDPLSPYLFVLCMEKLSLMIQNQVTNNTWRPIKISRHGPSFSHL 73
Query: 636 LFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNIL 695
LFA+D + F +A + + +V+++L + SG +N QK + S VS+H ++L
Sbjct: 74 LFADDCLLFTEAKSSQVKVVRNVLQKFCFASGLKINIQKLKFMSSSNVSRHKQHKFESLL 133
Query: 696 GVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQA 755
+ YLG P L GR K F+FI D++ +L W LSR GR L KSV A
Sbjct: 134 QFNHTSHLGKYLGFPMLSGRIKNSDFNFILDKINGRLAGWKMNLLSRPGRITLAKSVVTA 193
Query: 756 IPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWE 799
+P Y M LPS +C + + + W GK +W++W+
Sbjct: 194 MPIYTMQNLWLPSGICENIDATVRSFIW-GKNY----CHWVNWK 232
>IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
3397609-3394716 E EGN_Mt090430 20090702
Length = 703
Score = 139 bits (349), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 108/190 (56%), Gaps = 13/190 (6%)
Query: 575 LNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSH 634
+NG+P P RG+RQGDP+SPYLF+LCA+ LS L + +HG + P +SH
Sbjct: 288 INGVPTPVFKPKRGIRQGDPLSPYLFILCADVLSGLITKYHDDNKLHGISIANNAPTLSH 347
Query: 635 LLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNI 694
L FA+DS+ F +AN EA + I DY++ SGQ +N KS +F+ ++Q I +
Sbjct: 348 LTFADDSMVFCRANKSEAQNLMEIFADYQSISGQKINLNKSEMVFNSNLNQTIQTEFQQY 407
Query: 695 LGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQ 754
+ ++ + YLGLP+ + K QIF+FI + R LS R VLI++V Q
Sbjct: 408 MTIKITNNIDKYLGLPTQVL--KNQIFNFIME-----------RNLSFSSRGVLIRAVIQ 454
Query: 755 AIPAYCMLVF 764
AIP+Y + F
Sbjct: 455 AIPSYLSVDF 464
>IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
4206337-4207793 E EGN_Mt090430 20090702
Length = 357
Score = 138 bits (347), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 66/176 (37%), Positives = 106/176 (60%), Gaps = 1/176 (0%)
Query: 620 IHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLF 679
I G + R P +SHL FA+D++ F +AN EA +K I +Y+ GQ +N KS +F
Sbjct: 30 IMGISIARNAPAISHLFFADDNMIFCRANKSEAKHLKEIFDEYKRVLGQKINLNKSEMVF 89
Query: 680 SPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRF 739
SP + Q + + + + ++ + + YLGLP+ +GR K F+FI +R+ KL W R
Sbjct: 90 SPNIIQSVKKEFQDFMPIQITDSITKYLGLPTQVGRSKTHTFNFIMERVRAKLKGWKERN 149
Query: 740 LSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINW 795
LS GR VLI++V QA+P Y M +FL+P +C +++ + +WW G +++ R I+W
Sbjct: 150 LSFSGRGVLIRAVIQALPTYVMSMFLIPEGICDKIEQAICRFWWGGNEDR-RRIHW 204
>IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
13555953-13554878 H EGN_Mt090430 20090702
Length = 318
Score = 127 bits (319), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 154/352 (43%), Gaps = 38/352 (10%)
Query: 276 QQAKLFWFKYGDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTSNHGEMEVLVKDYFSELF 335
Q+++L W K GD N+K+FH + V G + LV ++FS F
Sbjct: 4 QKSRLLWLKKGDANTKFFHSIMSSRRRANSIFSLSANGTIVEGVEG-IRGLVFNHFSSHF 62
Query: 336 RAERQPDRSSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQ 395
++ +R S+ L + L PF DE ++ ++ K+PGPDG+N F++
Sbjct: 63 KSV-AAERPSIENLNFNILNLGQCGELTKPFSIDEVKQAVWDCDSFKSPGPDGVNMGFVK 121
Query: 396 KYWHIMGNAIVLNAVDWLQRGIFPSDLSLTNIVLILKIHVPDNSYTXSITLRISEIEEVS 455
+W + + I+ D+ + G ++ T I LI KI P R+++ +S
Sbjct: 122 DFWPELRDDIMHFLSDFHRNGKLSKGINNTFIALIPKIECPQ---------RLNDFRPIS 172
Query: 456 XNCERLSTYSLMXCYIXNCLXSLSEXAXEGVASYYFYEPVCFCAXPITDNVCVAFETIHN 515
S Y ++ + N L + + I D + +A E + +
Sbjct: 173 ---MVGSLYKILSKVLSNRLRRVIQ---------------------ILDGILIANEIVKD 208
Query: 516 LKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXL 575
K R DL K+D KA+D ++W YL VM + +P W +W +
Sbjct: 209 AK-RLKKDL--LLFKVDFEKAFDSINWSYLEAVMKKMNYPTLWRKWIMECVSTASTSVLV 265
Query: 576 NGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGR 627
NG P RGLRQGDP SP+LFL+ AEGL+ + + E L G ++G+
Sbjct: 266 NGSPTDEFKLERGLRQGDPFSPFLFLIAAEGLNVMMKALIEAGLFSGYKLGQ 317
>IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
40247310-40247920 H EGN_Mt090430 20090702
Length = 187
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 65/129 (50%), Positives = 75/129 (58%)
Query: 502 ITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQW 561
I DN +A E IH++K + G G ALKIDISKAYDRV W +L V+ +GF WIQW
Sbjct: 46 ILDNALIATEIIHSMKRKTKGWRGELALKIDISKAYDRVDWGFLRGVLMRMGFSEKWIQW 105
Query: 562 XXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIH 621
N VGPI P RGLRQGDP+SPYLF+L AEGLS L IH
Sbjct: 106 MMMCVSSVTYSVLTNFDRVGPIVPGRGLRQGDPLSPYLFILVAEGLSTLIHKIVNSGDIH 165
Query: 622 GCRVGRGCP 630
G +V RG P
Sbjct: 166 GVQVCRGAP 174
>IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13557404-13554904 H EGN_Mt090430 20090702
Length = 447
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 106/215 (49%), Gaps = 44/215 (20%)
Query: 502 ITDNVCVAFETIHNLK-NRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQ 560
I DN +A E I+++K ++R D LK+DISKAYDR+ W YL +M +GF WI+
Sbjct: 78 ILDNAMIAIEVIYHMKISKRMRDKN-VTLKLDISKAYDRIDWLYLKQIMVKMGFVTHWIR 136
Query: 561 WXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLI 620
W +N VGPI P RG RQGDP+S YLF+LCA+ +ER
Sbjct: 137 WIMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCAK---------DER--- 184
Query: 621 HGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFS 680
EA ++K IL YEA SGQA++ KS +S
Sbjct: 185 ------------------------------EANVMKHILETYEAASGQAISLPKSKVYYS 214
Query: 681 PCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGR 715
V H+ D I++ILG IG YLGL +IG+
Sbjct: 215 RSVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQ 249
>IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13373662-13371162 H EGN_Mt090430 20090702
Length = 447
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 106/215 (49%), Gaps = 44/215 (20%)
Query: 502 ITDNVCVAFETIHNLK-NRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQ 560
I DN +A E I+++K ++R D LK+DISKAYDR+ W YL +M +GF WI+
Sbjct: 78 ILDNAMIAIEVIYHMKISKRMRDKN-VTLKLDISKAYDRIDWLYLKQIMVKMGFVTHWIR 136
Query: 561 WXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLI 620
W +N VGPI P RG RQGDP+S YLF+LCA+ +ER
Sbjct: 137 WIMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCAK---------DER--- 184
Query: 621 HGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFS 680
EA ++K IL YEA SGQA++ KS +S
Sbjct: 185 ------------------------------EANVMKHILETYEAASGQAISLPKSKVYYS 214
Query: 681 PCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGR 715
V H+ D I++ILG IG YLGL +IG+
Sbjct: 215 RSVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQ 249
>IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase
chr04_pseudomolecule_IMGAG_V3 40245955-40247247 H
EGN_Mt090430 20090702
Length = 395
Score = 118 bits (296), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 119/253 (47%), Gaps = 28/253 (11%)
Query: 167 VVIDLXPN--EYHNYVRPFRVDNSWLVEDELELVVRRGWEESVNLNFISRRDALIFYVNR 224
+++D+ P+ + HNY F+ +NSWL+E+ VV GW + L R +
Sbjct: 168 ILLDIVPSVRQMHNY--SFKFENSWLLEE----VVVDGWGGTTGLELGDRVVNCSTKLQS 221
Query: 225 WGRARNREFWKRRNLIVRQIELDRDLYGGSWSARLKEE-WNKILLTEEIRKKQQAKLFWF 283
WGR + F + N VR +E R +++++E W KQ+ K+ W
Sbjct: 222 WGRRKRVRFKEEINQCVRILEELR-------ASQMEEAFW-----------KQRVKMHWL 263
Query: 284 KYGDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTSNHGEMEVLVKDYFSELFRAERQPDR 343
K GD N+K+FH DG + +M + + YF +LF A
Sbjct: 264 KEGDINTKFFHTSAIARGKVKKVSKLRTDDGITDTTQEDMCNVAQSYFEQLFSANAGV-H 322
Query: 344 SSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGN 403
+L L K V+ D L +P K E R+ LF M PDK+PGP+G N AF Q++W++ G+
Sbjct: 323 EPVLDLMNKCVSIDDNIILTSPITKQELRQALFQMQPDKSPGPNGFNQAFYQRFWYVCGD 382
Query: 404 AIVLNAVDWLQRG 416
I V WL RG
Sbjct: 383 DIFQAVVSWLDRG 395
>IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
13863857-13863375 E EGN_Mt090430 20090702
Length = 116
Score = 113 bits (282), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 70/116 (60%)
Query: 533 ISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQG 592
+SKAYDR++W+YL VM LGF A W W +N GPI P GLR+G
Sbjct: 1 MSKAYDRINWEYLRRVMLRLGFDAKWFGWIMMCVESVKYKVLVNQESEGPILPGSGLRKG 60
Query: 593 DPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKAN 648
DP+SPYLF+LCA+GL++L AE R +HG RV G P +HLLF +D F +A
Sbjct: 61 DPLSPYLFILCAQGLTSLIDKAEGRGDLHGVRVCTGAPTFTHLLFVDDCFLFCRAT 116
>IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
1329629-1330366 H EGN_Mt090430 20090702
Length = 245
Score = 112 bits (280), Expect = 7e-25, Method: Composition-based stats.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 1/146 (0%)
Query: 502 ITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQW 561
I+DN +++E H L N GY +K ++KAYD+V W +L M +GFP ++
Sbjct: 99 ISDNTLMSYEIFHYLSNTSSKK-GYMGMKTVMAKAYDKVEWTFLEATMLKMGFPHQFVST 157
Query: 562 XXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIH 621
++G P RGLRQGDP+SPYLF++C + S L A +LIH
Sbjct: 158 IMRCVTTVTFSILIDGSNSKEFQPQRGLRQGDPLSPYLFIICVDVFSELINKANNNKLIH 217
Query: 622 GCRVGRGCPRVSHLLFANDSIFFFKA 647
G ++ G P ++HL FA+ ++ F KA
Sbjct: 218 GVKIVNGAPEITHLFFADANLTFCKA 243
>IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
3891819-3892634 H EGN_Mt090430 20090702
Length = 213
Score = 110 bits (274), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 109/232 (46%), Gaps = 57/232 (24%)
Query: 502 ITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQW 561
I +N AFE +H + + G +G LK+DI K +D V+W YL DV+ + F W+QW
Sbjct: 35 IMNNALSAFEILHFMCCKHKGKIGDVVLKLDIPKTFDTVNWSYLQDVVIIMDFCTRWLQW 94
Query: 562 XXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIH 621
L+GI H
Sbjct: 95 ------------KLHGI------------------------------------------H 100
Query: 622 GCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSP 681
C P +S+LLFA+D++ F K EA +K+I+ D EA SG+ +NF K G FS
Sbjct: 101 IC---HKTPPISYLLFADDNVHFCKTFVSEAPCLKNIISDIEAASGKTINFDKLGISFSK 157
Query: 682 CVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLN 733
+S+++V+ IS++LGV SIG YLGLPS++ K IF + + +K++
Sbjct: 158 NISRNVVNSISSLLGVNESIGGGEYLGLPSMVRHSNKIIFQLPQCKSMEKVS 209
>IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6753317-6752601 H EGN_Mt090430 20090702
Length = 238
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 64/87 (73%)
Query: 712 LIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLC 771
+IGR KK +F FIKD++W+K+NSW R LS+ G+EV+IKS Q+IP Y M +FL+PS+L
Sbjct: 1 MIGRSKKDMFKFIKDQVWRKINSWGGRSLSKAGKEVMIKSALQSIPTYFMSIFLIPSSLG 60
Query: 772 HELQVIMNCYWWNGKKEQGRGINWLSW 798
E++ +MN +WW + +GI WLSW
Sbjct: 61 DEIEKMMNSFWWGNGGNRNKGIRWLSW 87
>IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 19822787-19820648 H
EGN_Mt090430 20090702
Length = 612
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 71/102 (69%)
Query: 645 FKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNILGVRGSIGDS 704
+ A+ +EA ++K+IL YE SGQA++ KS FS V + + I+NILGVR +G
Sbjct: 10 YLADDNEAQVMKNILHTYELASGQAISLPKSEVFFSTVVPLPLKETITNILGVRAVMGTG 69
Query: 705 FYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGRE 746
YLGLPS++GR K+ F FIKDR+W K+NSW+++ LS+ GRE
Sbjct: 70 KYLGLPSMVGRSKEATFGFIKDRIWHKINSWSSKCLSKAGRE 111
>IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873812-31875697 H EGN_Mt090430 20090702
Length = 485
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 71/93 (76%)
Query: 689 DDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVL 748
+D++ ILGVR +G YLGL S+IGR K F++IKDR+W+K+NSW R LS+ G+EV+
Sbjct: 7 EDLARILGVRLVLGTGKYLGLTSMIGRSKTTTFAYIKDRIWQKINSWRGRALSKAGKEVM 66
Query: 749 IKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCY 781
IK V Q+IP+Y M +++LP T+ +++++++N +
Sbjct: 67 IKFVLQSIPSYIMSIYVLPRTVINDIEMMLNSF 99
>IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
1330505-1330813 H EGN_Mt090430 20090702
Length = 102
Score = 103 bits (257), Expect = 4e-22, Method: Composition-based stats.
Identities = 45/93 (48%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 706 YLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFL 765
YLG+P+ +GR+K+Q+F F++DR+WKKL W R LS GR VLIK VA+AIP Y M FL
Sbjct: 10 YLGMPTGMGRNKRQVFEFLQDRIWKKLKGWKERNLSFAGRSVLIKVVAEAIPTYIMSGFL 69
Query: 766 LPSTLCHELQVIMNCYWWNGKKEQGRGINWLSW 798
LP + C++L+ ++ WW +QG+ +W++W
Sbjct: 70 LPKSFCNQLEKLICNIWWGSNTDQGK-THWINW 101
>IMGA|Medtr2g114260.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 26977303-26977923 H
EGN_Mt090430 20090702
Length = 178
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 689 DDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVL 748
+ +IL ++ S YLG+ + GR K+Q F+F+KDR+WKKL W + +S GR L
Sbjct: 5 KEFQSILPIKISTSIQKYLGITTHFGRSKEQDFNFLKDRIWKKLKGWKEKSVSFEGRAFL 64
Query: 749 IKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWE 799
I++VAQAIP Y M FLLP LC ++ ++ C++W G E + ++W E
Sbjct: 65 IRAVAQAIPTYIMSCFLLPKGLCSRIEKVV-CFFWWGSTEHKKKMHWTKRE 114
>IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
6317912-6319402 H EGN_Mt090430 20090702
Length = 456
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 86/182 (47%), Gaps = 1/182 (0%)
Query: 575 LNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSH 634
+NG G ARG+RQGDP+SP LF E LS + + + R SH
Sbjct: 5 INGSQRGYFKCARGVRQGDPLSPLLFCSAEEVLSRGILKLVDDGKVELIKASRDTQIPSH 64
Query: 635 LLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNI 694
+A+D + + K + +K + Y + SGQ +N KS +FS VS +++ + N+
Sbjct: 65 CFYADDLMVYCKGKLYSLEALKDLFTRYASCSGQVINLGKS-FIFSGGVSNNMLSTMVNL 123
Query: 695 LGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQ 754
LG YLG P G+ F I D++ KL SW LS GR L+KSV Q
Sbjct: 124 LGFNIGSLSFTYLGAPIFKGKPNTIHFQPIADKIKLKLASWKAYLLSIAGRVQLVKSVVQ 183
Query: 755 AI 756
+
Sbjct: 184 GM 185
>IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
25061037-25062481 E EGN_Mt090430 20090702
Length = 407
Score = 89.4 bits (220), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 78/123 (63%), Gaps = 1/123 (0%)
Query: 678 LFSPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNN 737
+FSP +SQ ++I L V+ S G YLG+P+ GR K+Q F FI +R+WKK W
Sbjct: 2 VFSPNISQEFKEEIQKHLHVKISDGIQKYLGMPTQFGRSKEQDFHFIMERIWKKHKGWKK 61
Query: 738 RFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLS 797
+ LS GR VLIK+VAQAIP Y M F+LP LC +++ + +WW G ++ + ++W+S
Sbjct: 62 KCLSFEGRGVLIKAVAQAIPTYYMSCFMLPKGLCTKIEKAICSFWW-GTTDKNKKMHWVS 120
Query: 798 WER 800
++
Sbjct: 121 KKK 123
>IMGA|Medtr4g013050.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 2458849-2459642 H
EGN_Mt090430 20090702
Length = 155
Score = 89.0 bits (219), Expect = 9e-18, Method: Composition-based stats.
Identities = 64/216 (29%), Positives = 91/216 (42%), Gaps = 68/216 (31%)
Query: 502 ITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQW 561
I DN + FE +H++K LK+DI+KAY+++ W YL VM +G +
Sbjct: 8 ILDNAMIPFEVVHHMKIDTRMSNNIATLKLDINKAYNQIDWVYLKKVMLKMGLSQSCNL- 66
Query: 562 XXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIH 621
VGPI RGL Q DP+ PYL++LCAEG SAL R AE R +
Sbjct: 67 ------------------VGPIILGRGLCQSDPLFPYLYILCAEGFSALNRQAERRAI-- 106
Query: 622 GCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSP 681
N + FF S +S
Sbjct: 107 -----------------NMASFF------------------------------SKIYYST 119
Query: 682 CVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDK 717
+ I I++ILGV+ ++G +LGLP +IG++K
Sbjct: 120 TAEEQIQATITHILGVQAALGIGKFLGLPFMIGKNK 155
>IMGA|Medtr4g012970.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 2420499-2421292 H
EGN_Mt090430 20090702
Length = 155
Score = 89.0 bits (219), Expect = 9e-18, Method: Composition-based stats.
Identities = 64/216 (29%), Positives = 91/216 (42%), Gaps = 68/216 (31%)
Query: 502 ITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQW 561
I DN + FE +H++K LK+DI+KAY+++ W YL VM +G +
Sbjct: 8 ILDNAMIPFEVVHHMKIDTRMSNNIATLKLDINKAYNQIDWVYLKKVMLKMGLSQSCNL- 66
Query: 562 XXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIH 621
VGPI RGL Q DP+ PYL++LCAEG SAL R AE R +
Sbjct: 67 ------------------VGPIILGRGLCQSDPLFPYLYILCAEGFSALNRQAERRAI-- 106
Query: 622 GCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSP 681
N + FF S +S
Sbjct: 107 -----------------NMASFF------------------------------SKIYYST 119
Query: 682 CVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDK 717
+ I I++ILGV+ ++G +LGLP +IG++K
Sbjct: 120 TAEEQIQATITHILGVQAALGIGKFLGLPFMIGKNK 155
>IMGA|Medtr5g009520.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
2111344-2110511 H EGN_Mt090430 20090702
Length = 277
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 114/255 (44%), Gaps = 8/255 (3%)
Query: 183 FRVDNSWLVEDELELVVRRGWEESVNLNFISRRDALIFYVNRWGRARNREFWKRRNLIVR 242
F +N+WL++ + V W + ++ + ++ W R N + ++
Sbjct: 17 FMFENAWLIDPKFHNFVCNKWHSYGENDISAKSSMCVADISLWNR--NHFLHLKHDIDNC 74
Query: 243 QIELD---RDLYGGS--WSARLKEEWNKILLTEEIRKKQQAKLFWFKYGDKNSKYFHXXX 297
+ +LD ++ G+ + L++ + +L E+ +Q+AK WF+ GD N+++FH
Sbjct: 75 RRKLDCVLSQVHAGNIKYFNALRKCMSHLLAKEDTFWRQRAKTHWFREGDLNTRFFHAAA 134
Query: 298 XXXXXXXXXXXXXXSDGFVTSNHGEMEVLVKDYFSELFRAERQPDRSSLLRLFQKRVTDS 357
+ + + + +DYF+E+F +L +++
Sbjct: 135 TSRRKINCLTSLVNTPSTRIKDSLVLCSVPRDYFAEIFHKPINI-LYPVLDAINPSISED 193
Query: 358 DAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGNAIVLNAVDWLQRGI 417
+L F DEFR+ +FSM DK GP NP F Q +W ++G I + WL G
Sbjct: 194 ANTNLTTLFTIDEFRDAMFSMKLDKYLGPGRFNPDFYQYFWPLIGQEIFQESYSWLTTGT 253
Query: 418 FPSDLSLTNIVLILK 432
F S L+LTNI LI K
Sbjct: 254 FLSTLNLTNIALIPK 268
>IMGA|AC225611_8.1 contains similarity to reverse trancriptase,
related, putative AC225611.10 67770-68780 H EGN_Mt090430
20090702
Length = 336
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 709 LPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPS 768
+P+ GR K+Q F+F+ DR+WKKL W + LS GR VLI+ VAQAIP Y M FLLP
Sbjct: 1 MPTHFGRSKEQDFNFLMDRIWKKLKGWKEKSLSFEGRGVLIRVVAQAIPTYIMSCFLLPK 60
Query: 769 TLCHELQVIMNCYWWNGKKEQGRGINWL 796
++C ++ + +WW G E R I+W+
Sbjct: 61 SICDRIERAICSFWW-GSNETKRKIHWI 87
>IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
7642559-7645649 E EGN_Mt090430 20090702
Length = 541
Score = 86.7 bits (213), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 709 LPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPS 768
+P+ GR K+Q F FI DR+WKKL W + LS GR LI+++AQAIP Y M FLLP
Sbjct: 1 MPTQFGRSKEQDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAIAQAIPTYVMSCFLLPK 60
Query: 769 TLCHELQVIMNCYWWNGKKEQGRGINWLSWE 799
LC +++ + +WW G + R I+W E
Sbjct: 61 GLCEKIEKAVCAFWWGG-SDSKRKIHWTKKE 90
>IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35324945-35323011 H EGN_Mt090430 20090702
Length = 613
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 62/105 (59%), Gaps = 1/105 (0%)
Query: 695 LGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQ 754
L ++ S YLG+P+ +G K+Q F F+ DR+W KL W + LS GR +LI++VAQ
Sbjct: 11 LPIKISNNIQKYLGMPTHLGMSKEQDFQFLMDRVWNKLKGWKEKSLSFEGRGILIRAVAQ 70
Query: 755 AIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWE 799
AI Y M FLLP LC +++ + +WW G + R I+W E
Sbjct: 71 AISTYIMSCFLLPKGLCDKIEKAVCAFWW-GSTDNKRKIHWTKKE 114
>IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 19990-20214 H
EGN_Mt090430 20090702
Length = 74
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/73 (54%), Positives = 47/73 (64%)
Query: 580 VGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFAN 639
VG I P RGLRQGDP+SPYLF+LCAEGLS L E + G + P + HLLFA+
Sbjct: 2 VGLIIPGRGLRQGDPLSPYLFILCAEGLSTLIDKDERCGDLRGISICTHAPTICHLLFAD 61
Query: 640 DSIFFFKANAHEA 652
D FF+AN EA
Sbjct: 62 DCFLFFRANEKEA 74
>IMGA|Medtr8g105650.1 reverse transcriptase, putative;
100033-105622, related chr08_pseudomolecule_IMGAG_V3
23385469-23384651 H EGN_Mt090430 20090702
Length = 244
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 709 LPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPS 768
+P+ GR K+ F FI DR+WKKL W + LS GR LI++VAQAIP Y M FLLP
Sbjct: 1 MPTHFGRSKEHDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAVAQAIPTYVMSCFLLPK 60
Query: 769 TLCHELQVIMNCYWWNGKKEQGRGINWLSWE 799
LC +++ ++ +WW G + + I+W E
Sbjct: 61 GLCEKIEKVVCAFWWGGTDSK-KKIHWTKRE 90
>IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26789109-26788828 H EGN_Mt090430 20090702
Length = 93
Score = 84.3 bits (207), Expect = 2e-16, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 709 LPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPS 768
+P+ GR K+Q F FI D++WKKL W + LS GR VLI++VAQAIP Y M FLLP
Sbjct: 1 MPTQFGRSKEQDFHFIMDKIWKKLKGWKEKCLSFEGRGVLIRAVAQAIPTYYMSCFLLPK 60
Query: 769 TLCHELQVIMNCYWWNGKKEQGRGINW 795
LC +++ + +WW G R I+W
Sbjct: 61 GLCTKIEKAVCSFWW-GTAGDKRKIHW 86
>IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
16025455-16024014 E EGN_Mt090430 20090702
Length = 70
Score = 78.6 bits (192), Expect = 1e-14, Method: Composition-based stats.
Identities = 35/62 (56%), Positives = 43/62 (69%)
Query: 586 ARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFF 645
R LRQ DP+SP+LF++CAEGLS+L R+AE +I G G P V HLLFA+D FF
Sbjct: 6 GRSLRQADPLSPHLFIICAEGLSSLIREAEVGEIISGTSTCSGAPLVFHLLFADDCFLFF 65
Query: 646 KA 647
KA
Sbjct: 66 KA 67
>IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 40668899-40668561 H
EGN_Mt090430 20090702
Length = 112
Score = 78.2 bits (191), Expect = 1e-14, Method: Composition-based stats.
Identities = 37/77 (48%), Positives = 47/77 (61%)
Query: 599 LFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSI 658
LF++CAEGLS L + E R IHG +V RG P ++HLLF +D F +AN EA +
Sbjct: 24 LFIICAEGLSVLLKKLEARGEIHGIKVCRGAPLLTHLLFVDDCFLFCRANEKEAQALSEA 83
Query: 659 LLDYEARSGQAVNFQKS 675
L YE S Q +N QKS
Sbjct: 84 LKKYEEASRQPINLQKS 100
>IMGA|Medtr8g024620.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4663551-4665766 E
EGN_Mt090430 20090702
Length = 587
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%)
Query: 735 WNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGIN 794
W+++ LS+ GREV+IKSV Q IP+Y M VFLLP+TL E++ ++N +WW + +GI+
Sbjct: 41 WSSQCLSKAGREVMIKSVLQVIPSYIMSVFLLPTTLVDEIEKMVNGFWWGHGGSRRKGIH 100
Query: 795 WLSWER 800
WLSW++
Sbjct: 101 WLSWDK 106
>IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
13465118-13466957 H EGN_Mt090430 20090702
Length = 509
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 81/176 (46%), Gaps = 1/176 (0%)
Query: 575 LNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSH 634
+NG VG RG+RQGDP+SP LF + E LS + R + R R SH
Sbjct: 292 INGKSVGFFKCTRGVRQGDPLSPILFCIAEEVLSRGIEELVVRGRMTQIRATRSLYIPSH 351
Query: 635 LLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNI 694
L+A+D + F K + +L Y SGQ +N QKS ++ + ++ I ++
Sbjct: 352 CLYADDILIFCKGTLANVKNLMHLLEGYGNYSGQLINAQKS-KFYTGSIPLSKINAICSL 410
Query: 695 LGVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIK 750
G YLG+ G+ K I D++ +LN+W L+ +GR L K
Sbjct: 411 TGFSQGCIPLNYLGILLFKGKPKSIYLKPIVDKIQLRLNAWKGTLLTFMGRVQLRK 466
>IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 17721962-17723166 E
EGN_Mt090430 20090702
Length = 188
Score = 75.5 bits (184), Expect = 9e-14, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 24/137 (17%)
Query: 669 AVNFQKSGTL-----FSPCVSQHIVDDISNILGVRGSIGDSFYLGLPSLIGRDKKQIFSF 723
++N K TL FS V+ +I ILG++ G S YLG+P+ +G+ K+Q
Sbjct: 29 SLNLVKKSTLTNLIIFSKNVADIEQSNIIQILGMKKVEGFSKYLGVPTHMGKSKRQ---- 84
Query: 724 IKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWW 783
+ LS GR LIK+V+QAIP Y M FLLP C +L ++ +WW
Sbjct: 85 --------------KHLSFAGRSTLIKAVSQAIPTYIMSGFLLPKNFCQQLDRVICDFWW 130
Query: 784 NGKKEQGRGINWLSWER 800
+ R +W+ WE+
Sbjct: 131 GSNTDSKR-THWIKWEK 146
>IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 20356-20538 H
EGN_Mt090430 20090702
Length = 60
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 701 IGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAY 759
+G YLGLPS++GR K+ F FIKDR+W K+NSW+++ L +V REV+IK V Q IP+Y
Sbjct: 1 MGTCKYLGLPSMMGRSKEATFGFIKDRIWHKINSWSSKCLFKVSREVMIKPVLQFIPSY 59
>IMGA|CU179634_33.1 RNA-directed DNA polymerase (Reverse
transcriptase) CU179634.6 121572-121327 H EGN_Mt090430
20090702
Length = 81
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 530 KIDISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGL 589
K+DI KAYD ++W++L +M +GF WI+W +N G S RGL
Sbjct: 3 KLDIQKAYDHLNWNFLLKLMEKMGFAFRWIKWIEHCISTVKFSVLINRETNGFFSSQRGL 62
Query: 590 RQGDPISPYLFLLCAEGLS 608
RQGDP+SP+LF++ EG S
Sbjct: 63 RQGDPLSPFLFIMGMEGSS 81
>IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, related
chr04_pseudomolecule_IMGAG_V3 32379758-32380006 H
EGN_Mt090430 20090702
Length = 82
Score = 68.9 bits (167), Expect = 9e-12, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 49/77 (63%)
Query: 602 LCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLD 661
+CA GLSAL +++ IH +V RG P ++HLL F++AN E+T +K +L
Sbjct: 1 MCAVGLSALLKESGGSGDIHDIKVCRGAPILTHLLLLMIDFLFWRANLSESTKIKEVLCY 60
Query: 662 YEARSGQAVNFQKSGTL 678
Y+A SG+A+NFQKS L
Sbjct: 61 YKAVSGKAINFQKSKIL 77
>IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 9482517-9480709 E
EGN_Mt090430 20090702
Length = 602
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 726 DRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNG 785
DR+ KKL W + LS GR VLI++VAQAIP Y M +LLP +LC +++ + +WW G
Sbjct: 2 DRIRKKLKGWKEKNLSFEGRGVLIRAVAQAIPVYVMSCYLLPISLCEDIERAVCNFWWGG 61
Query: 786 KKEQGRGINWLS 797
E R I+W+S
Sbjct: 62 -TEHTRKIHWVS 72
>IMGA|AC235669_13.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC235669.1 69436-68759 H EGN_Mt090430
20090702
Length = 225
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 19/235 (8%)
Query: 353 RVTDSDAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGNAIVLNAVDW 412
R+++ SL KDE +FSM KAPGPDG P F + +W +G+ I
Sbjct: 3 RLSEQCRDSLTTLILKDEVGSTVFSMKSYKAPGPDGFQPIFFKHFWERIGDDIRRLVHTT 62
Query: 413 LQRGIFPSDLSLTNIVLILKIHVPDNSYTXSITLRISEIEEVSXNCERLSTYSLMXCYIX 472
G + ++ T I LI K P R+ +S C + + L+ ++
Sbjct: 63 FNMGSINASIAKTLIFLIPKKSNPQ---------RLKNFRPIS-FCNVI--FKLITKFLV 110
Query: 473 NCLXSLSEXAXEGVASYYFYEPVCFCAXPITDNVCVAFETIHNLKNRRCGDLGYCALKID 532
+ L L + S + ITDN +A E +H + + G KID
Sbjct: 111 SRLRPLLVDMISPLQSSFI------PGRGITDNAILAQEVVHFIHHSHAKK-GCIVSKID 163
Query: 533 ISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPAR 587
KAYDR +WD+L +H GFP+ I NG+ +P+R
Sbjct: 164 HEKAYDRHNWDFLELTLHGFGFPSTTISLNMSCVRSSNLSVLWNGVKTDHFTPSR 218
>IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 40910518-40909919 H
EGN_Mt090430 20090702
Length = 199
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 726 DRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNG 785
DR+WKKL W + LS GR VLI++V Q IP Y M FLLP LC +++ ++ +WW G
Sbjct: 2 DRIWKKLKGWKEKSLSFEGRGVLIRAVTQVIPTYYMSCFLLPKGLCEKIERVVCSFWW-G 60
Query: 786 KKEQGRGINW 795
+ I+W
Sbjct: 61 STNTKKKIHW 70
>IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
21818522-21818196 H EGN_Mt090430 20090702
Length = 108
Score = 65.9 bits (159), Expect = 8e-11, Method: Composition-based stats.
Identities = 33/73 (45%), Positives = 43/73 (58%)
Query: 586 ARGLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFF 645
RGLR+GDP+S YLF+LC +G+S L R +HG ++ R P +SHLL N F
Sbjct: 24 GRGLRKGDPLSLYLFILCMKGISMLMRQTYRGDRMHGVQIFRNEPIMSHLLVVNGCFPFC 83
Query: 646 KANAHEATMVKSI 658
KAN E +K I
Sbjct: 84 KANCVEDENMKEI 96
>IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
14903666-14903472 H EGN_Mt090430 20090702
Length = 64
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 38/53 (71%)
Query: 748 LIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWER 800
+IKSV Q+IP Y M +FL+PS++ E++ IMN +WW + +GI WLSW++
Sbjct: 1 MIKSVLQSIPTYFMSIFLIPSSIGDEIEKIMNSFWWENGGNRNKGIKWLSWDK 53
>IMGA|Medtr1g009630.1 RNA-directed DNA polymerase, related
chr01_pseudomolecule_IMGAG_V3 1363994-1362753 E
EGN_Mt090430 20090702
Length = 180
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 70/157 (44%), Gaps = 10/157 (6%)
Query: 280 LFWFKYGDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTSNHGEMEVLV----KDYFSELF 335
+ W++ GD N+K FH ++ +M+ + K +FS LF
Sbjct: 1 MHWYRDGDLNTKCFHASALLREKLILSYFEDANEV-----RAQMKYISSMWPKIHFSGLF 55
Query: 336 RAERQPDRSSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDKAPGPDGLNPAFLQ 395
+ R+S++ + +++ + L+ PF +EF+E++FS+ DK PG G N F Q
Sbjct: 56 QVTDSV-RASVINATNQVISEDENTYLVVPFCVEEFKEEMFSLLADKCPGSKGFNLGFYQ 114
Query: 396 KYWHIMGNAIVLNAVDWLQRGIFPSDLSLTNIVLILK 432
+W I I WL + L+ TN+ L K
Sbjct: 115 HFWQICSFDIFWEYCYWLTNFQISASLNSTNMTLTPK 151
>IMGA|Medtr1g089700.1 reverse transcriptase, putative; 16838-20266,
related chr01_pseudomolecule_IMGAG_V3 17930727-17931209
H EGN_Mt090430 20090702
Length = 160
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 36/126 (28%), Positives = 56/126 (44%)
Query: 264 NKILLTEEIRKKQQAKLFWFKYGDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTSNHGEM 323
N +LL EE+ Q+AK W KYGD N+K+FH +G ++ +
Sbjct: 24 NDVLLQEEVWWAQRAKTQWLKYGDNNTKFFHFKASQRKKKNYIYSITDKNGREWNDDIHI 83
Query: 324 EVLVKDYFSELFRAERQPDRSSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSMHPDKA 383
+ +YF+++F + + L + RV A L A F +E + SM A
Sbjct: 84 HDIFTNYFADIFSTSHPTEVHNNLDVISNRVPTDRQAELSADFTIEEVEATMKSMKATSA 143
Query: 384 PGPDGL 389
PG DG+
Sbjct: 144 PGLDGI 149
>IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26369293-26369057 H EGN_Mt090430 20090702
Length = 78
Score = 62.0 bits (149), Expect = 1e-09, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 748 LIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWER 800
+IKSV QAIP+Y M +FLL S+L ++ ++N +WW RGI+WLSWE+
Sbjct: 1 MIKSVLQAIPSYVMSIFLLLSSLIDAIEKMLNAFWWEHGGSNNRGIHWLSWEK 53
>IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
24503551-24503384 H EGN_Mt090430 20090702
Length = 55
Score = 61.6 bits (148), Expect = 2e-09, Method: Composition-based stats.
Identities = 25/49 (51%), Positives = 38/49 (77%)
Query: 718 KQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLL 766
K IF++++DR+WK++ SW+ + L + GRE+LIK V Q +PAY M +FLL
Sbjct: 2 KVIFNYVRDRIWKRIESWHGKHLFKAGREILIKFVVQLVPAYQMSIFLL 50
>IMGA|Medtr1g107130.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 22528853-22529465 E
EGN_Mt090430 20090702
Length = 115
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 52/107 (48%), Gaps = 31/107 (28%)
Query: 636 LFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQKSGTLFSPCVSQHIVDDISNIL 695
LFA D + F +A +E +K IL YEARS Q +N
Sbjct: 15 LFAYDCLLFLRAKENETQTMKHILFVYEARSRQLIN------------------------ 50
Query: 696 GVRGSIGDSFYLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSR 742
+ YLG S+IGR+K F FIKD++W+ +NSW+N+ LS+
Sbjct: 51 -------NGRYLGPSSIIGRNKGDTFDFIKDQVWQIINSWSNKCLSK 90
>IMGA|Medtr2g010180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
2418197-2417610 H EGN_Mt090430 20090702
Length = 174
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 50/124 (40%), Gaps = 21/124 (16%)
Query: 552 LGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALF 611
L FP W +W +NG P + GL+Q DP++ +LFL EGLS L
Sbjct: 4 LRFPHRWCRWIRVCVFYGSLSVLVNGCPTEEVDIQGGLKQCDPLALFLFLFVVEGLSGLV 63
Query: 612 RDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVN 671
R AE L HG +V +K+IL +E SG VN
Sbjct: 64 RLAEATSLFHGFKV---------------------TTMANLQALKTILRCFELSSGLKVN 102
Query: 672 FQKS 675
F KS
Sbjct: 103 FSKS 106
>IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5982582-5983034 H EGN_Mt090430 20090702
Length = 150
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 37/53 (69%)
Query: 748 LIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWER 800
+IK + Q+IP Y + +FL+PS+L E++ IMN +WW + +GI WLSW++
Sbjct: 1 MIKYILQSIPTYFISIFLIPSSLGDEIEKIMNYFWWENGGNRNKGIRWLSWDK 53
>IMGA|Medtr1g087030.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
17409058-17408195 H EGN_Mt090430 20090702
Length = 228
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 48/110 (43%), Gaps = 9/110 (8%)
Query: 509 AFETIHNLKNRRCGDLGYCALKIDISKAYDRVSWDYLSDVMHCLGFPAAWIQWXXXXXXX 568
+F+ + + R G LK+D AYD V+W+ GF W QW
Sbjct: 11 SFKLQKVVNDSRKSGRGLMMLKVDFKTAYDSVNWE---------GFSETWRQWISTYLAS 61
Query: 569 XXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALFRDAEERR 618
+NGI S +GLRQG P SP+ FL+ AE L+ ++ +
Sbjct: 62 SRVPVQVNGISTDKFSIPQGLRQGYPSSPFQFLIVAEELNVTKKNCRRTK 111
>IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
3889810-3888042 H EGN_Mt090430 20090702
Length = 489
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%)
Query: 748 LIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWER 800
+IKSV QAI +Y M +F LP+TL ++ +MN +WW + + INWLSWE+
Sbjct: 1 MIKSVLQAIMSYVMSLFQLPTTLITTIERMMNSFWWGHDRSTHQSINWLSWEK 53
>IMGA|Medtr4g160710.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 40774925-40774579 H
EGN_Mt090430 20090702
Length = 77
Score = 58.2 bits (139), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/61 (45%), Positives = 35/61 (57%)
Query: 615 EERRLIHGCRVGRGCPRVSHLLFANDSIFFFKANAHEATMVKSILLDYEARSGQAVNFQK 674
E R IHG +V RG P ++HLLF +D F +AN EA + L YE S Q +N QK
Sbjct: 7 EARGEIHGIKVCRGAPLLTHLLFVDDCFLFCRANEKEAQALSEALKKYEEASRQPINLQK 66
Query: 675 S 675
S
Sbjct: 67 S 67
>IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
26300425-26300964 H EGN_Mt090430 20090702
Length = 179
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 39/53 (73%), Gaps = 1/53 (1%)
Query: 748 LIKSVAQAIPAYCMLVFLLPSTLCHELQVIMNCYWWNGKKEQGRGINWLSWER 800
+IK V Q+IP+Y M ++LLP+++ +++ ++N +WW G+ RGI W++WER
Sbjct: 1 MIKYVLQSIPSYIMSIYLLPNSVIDDIEKMINAFWWGGRSNN-RGIKWMAWER 52
>IMGA|Medtr7g089950.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 19938157-19937405 H
EGN_Mt090430 20090702
Length = 97
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 41/69 (59%)
Query: 370 EFREDLFSMHPDKAPGPDGLNPAFLQKYWHIMGNAIVLNAVDWLQRGIFPSDLSLTNIVL 429
EFR+ +FSMH DK+PG +GLN F QK W ++G I WL F +L+ T++ L
Sbjct: 22 EFRQPVFSMHLDKSPGSNGLNSGFFQKIWPLIGTEIFETRCLWLDACSFSPNLNDTSVAL 81
Query: 430 ILKIHVPDN 438
I + P++
Sbjct: 82 IARADHPES 90
>IMGA|Medtr3g162890.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
42636230-42638565 E EGN_Mt090430 20090702
Length = 167
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 1/144 (0%)
Query: 259 LKEEWNKILLTEEIRKKQQAKLFWFKYGDKNSKYFHXXXXXXXXXXXXXXXXXSDGFVTS 318
L+ E+NK+L E++ Q+++ W K+ +KN+K+FH DG
Sbjct: 24 LQNEYNKVLAQEKMLWYQKSRENWIKFENKNTKFFHVQTVIRRRRNKVAGLNI-DGIWCI 82
Query: 319 NHGEMEVLVKDYFSELFRAERQPDRSSLLRLFQKRVTDSDAASLLAPFRKDEFREDLFSM 378
N + YF LF+ SSL ++ SL +E + LFSM
Sbjct: 83 NEDSLRREALSYFRSLFQEGGPTSPSSLHFSHFPHISIDLYNSLCLNPSLEEVKFSLFSM 142
Query: 379 HPDKAPGPDGLNPAFLQKYWHIMG 402
+ KAPG DG P F + +W+I+
Sbjct: 143 NSYKAPGQDGFQPIFFKTFWNIVS 166
>IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873419-31873604 H EGN_Mt090430 20090702
Length = 61
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 33/60 (55%)
Query: 552 LGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLSALF 611
+GF WI+W +N VGPI RGLRQGDP+S YLF + AEGL AL
Sbjct: 1 MGFDDKWIRWMMMCVSSATYSILMNFNRVGPIITGRGLRQGDPLSSYLFSMVAEGLCALI 60
>IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V3
23474829-23476616 H EGN_Mt090430 20090702
Length = 477
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 717 KKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQV 776
K +I +F ++ + ++L SW + L++VGR L+KSV +IP Y M V LP + C +
Sbjct: 5 KGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDR 64
Query: 777 IMNCYWWNG 785
+ + W G
Sbjct: 65 LAINFLWKG 73
>IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23354620-23355450 H EGN_Mt090430 20090702
Length = 276
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 717 KKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQV 776
K +I +F ++ + ++L SW + L++VGR L+KSV +IP Y M V LP + C +
Sbjct: 5 KGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDR 64
Query: 777 IMNCYWWNG 785
+ + W G
Sbjct: 65 LAINFLWKG 73
>IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23360766-23362551 H EGN_Mt090430 20090702
Length = 379
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 717 KKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQV 776
K +I +F ++ + ++L SW + L++VGR L+KSV +IP Y M V LP + C +
Sbjct: 5 KGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDR 64
Query: 777 IMNCYWWNG 785
+ + W G
Sbjct: 65 LAINFLWKG 73
>IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease H,
putative chr04_pseudomolecule_IMGAG_V3 34349081-34347530
H EGN_Mt090430 20090702
Length = 346
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 717 KKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQV 776
K +I +F ++ + ++L SW + L++VGR L+KSV +IP Y M V LP + C +
Sbjct: 5 KGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDR 64
Query: 777 IMNCYWWNG 785
+ + W G
Sbjct: 65 LAINFLWKG 73
>IMGA|Medtr1g071160.1 RNA-directed DNA polymerase, putative
chr01_pseudomolecule_IMGAG_V3 14149157-14148915 H
EGN_Mt090430 20090702
Length = 80
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 33/74 (44%)
Query: 549 MHCLGFPAAWIQWXXXXXXXXXXXXXLNGIPVGPISPARGLRQGDPISPYLFLLCAEGLS 608
M +GF W W +NG P RGLRQGDP+S +LFLL AEG +
Sbjct: 1 MEKMGFCVKWRNWMSKCLRLTFMLVLVNGSPTKEFGVGRGLRQGDPLSMFLFLLAAEGFN 60
Query: 609 ALFRDAEERRLIHG 622
+ + L G
Sbjct: 61 VILSKSVHLDLFEG 74
>IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23480965-23481815 H EGN_Mt090430 20090702
Length = 251
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 717 KKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFLLPSTLCHELQV 776
K +I +F ++ + ++L SW + L++VGR L+KSV +IP Y M V LP + C +
Sbjct: 5 KGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESIDR 64
Query: 777 IMNCYWWNG 785
+ + W G
Sbjct: 65 LAINFLWKG 73
>IMGA|Medtr3g097880.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
23554988-23554803 H EGN_Mt090430 20090702
Length = 61
Score = 52.4 bits (124), Expect = 9e-07, Method: Composition-based stats.
Identities = 25/39 (64%), Positives = 29/39 (74%)
Query: 502 ITDNVCVAFETIHNLKNRRCGDLGYCALKIDISKAYDRV 540
I DNV A E IH++K +R G +G ALKIDISKAYDRV
Sbjct: 22 IIDNVIAAHEVIHHMKCKRKGKVGEVALKIDISKAYDRV 60
>IMGA|Medtr3g030650.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
8360899-8363574 H EGN_Mt090430 20090702
Length = 139
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%)
Query: 588 GLRQGDPISPYLFLLCAEGLSALFRDAEERRLIHGCRVGRGCPRVSHLLFANDSIFFFKA 647
G++QGDP++P+ FL AE LS + AE + +V R V+HL + +D+ FF
Sbjct: 68 GIQQGDPLTPFFFLPVAEALSMYVKKAEALGICTSFKVSRFGLSVTHLQYVDDTFFFIGK 127
Query: 648 NAHEATMVKSI 658
A E K++
Sbjct: 128 TAMENLWAKTL 138
>IMGA|Medtr1g064980.1 RNA-directed DNA polymerase ; Ribonuclease H,
related chr01_pseudomolecule_IMGAG_V3 12753081-12752276
H EGN_Mt090430 20090702
Length = 137
Score = 49.7 bits (117), Expect = 6e-06, Method: Composition-based stats.
Identities = 23/78 (29%), Positives = 43/78 (55%)
Query: 706 YLGLPSLIGRDKKQIFSFIKDRLWKKLNSWNNRFLSRVGREVLIKSVAQAIPAYCMLVFL 765
Y G P + GR + +++ + D++ K L +W L++VG+ L+KSV I Y + +
Sbjct: 42 YPGFPLVKGRVSRYVYNDVVDKVSKWLAAWKGTILNKVGQAYLVKSVTTTISVYTIQLHN 101
Query: 766 LPSTLCHELQVIMNCYWW 783
LP+ +C +L + + W
Sbjct: 102 LPTHVCKKLDKMARSFLW 119