Jatropha Genome Database
- JcCA0065831.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0065831.10 - phase: 1 /partial
(152 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 278 7e-76
IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 276 3e-75
IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, t... 249 3e-67
IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 249 5e-67
IMGA|Medtr3g160060.1 Protein of unknown function CP12; Glycerald... 109 5e-25
IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, t... 108 1e-24
>IMGA|Medtr8g109660.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr08_pseudomolecule_IMGAG_V3 24655871-24652454 F
EGN_Mt090430 20090702
Length = 339
Score = 278 bits (711), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 136/151 (90%), Positives = 142/151 (94%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV
Sbjct: 188 TQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 247
Query: 61 DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
DLTVRLEK ATY+QIKAAIKEESEG LKGILGY E+D+VS+DFIGD RSSIFDAKAGIAL
Sbjct: 248 DLTVRLEKPATYDQIKAAIKEESEGNLKGILGYTEDDVVSTDFIGDTRSSIFDAKAGIAL 307
Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMASH 151
ND FVKLVSWYDNE+GYSTRVVDLI H+A
Sbjct: 308 NDNFVKLVSWYDNELGYSTRVVDLIVHIAKQ 338
>IMGA|Medtr3g103260.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr03_pseudomolecule_IMGAG_V3 25359130-25364058 E
EGN_Mt090430 20090702
Length = 340
Score = 276 bits (705), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 135/150 (90%), Positives = 143/150 (95%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPS KDWRGGRAASFNIIPSSTGAAKAVGKVLP LNGKLTGM+FRVPTVDVSVV
Sbjct: 189 TQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPVLNGKLTGMSFRVPTVDVSVV 248
Query: 61 DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
DLTVRLEK ATYE+IKAAIKEESEGKLKGILGY E+D+VS+DFIGD+RSSIFDAKAGIAL
Sbjct: 249 DLTVRLEKKATYEEIKAAIKEESEGKLKGILGYTEDDVVSTDFIGDSRSSIFDAKAGIAL 308
Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMAS 150
ND FVKLVSWYDNE GYSTRV+DLI H+AS
Sbjct: 309 NDNFVKLVSWYDNEWGYSTRVIDLIVHIAS 338
>IMGA|Medtr2g077990.2 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
EGN_Mt090430 20090702
Length = 392
Score = 249 bits (636), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 120/149 (80%), Positives = 133/149 (89%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPSMKDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +VSVV
Sbjct: 238 TQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVV 297
Query: 61 DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
DLT RL+K A+YE +KAAIK SEG+LKGILGY +ED+VS+DFIGD+RSSIFDAKAGI L
Sbjct: 298 DLTCRLQKNASYEDVKAAIKLASEGQLKGILGYTDEDVVSNDFIGDSRSSIFDAKAGIGL 357
Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMA 149
+ FVKLVSWYDNE GYS RV+DL+ HMA
Sbjct: 358 SKSFVKLVSWYDNEWGYSNRVLDLVGHMA 386
>IMGA|Medtr2g077990.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr02_pseudomolecule_IMGAG_V3 18112574-18118811 E
EGN_Mt090430 20090702
Length = 418
Score = 249 bits (635), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 120/149 (80%), Positives = 133/149 (89%)
Query: 1 TQKTVDGPSMKDWRGGRAASFNIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVV 60
TQKTVDGPSMKDWRGGR A+ NIIPSSTGAAKAVGKVLP LNGKLTGMAFRVPT +VSVV
Sbjct: 264 TQKTVDGPSMKDWRGGRGAAQNIIPSSTGAAKAVGKVLPELNGKLTGMAFRVPTANVSVV 323
Query: 61 DLTVRLEKAATYEQIKAAIKEESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIAL 120
DLT RL+K A+YE +KAAIK SEG+LKGILGY +ED+VS+DFIGD+RSSIFDAKAGI L
Sbjct: 324 DLTCRLQKNASYEDVKAAIKLASEGQLKGILGYTDEDVVSNDFIGDSRSSIFDAKAGIGL 383
Query: 121 NDKFVKLVSWYDNEVGYSTRVVDLICHMA 149
+ FVKLVSWYDNE GYS RV+DL+ HMA
Sbjct: 384 SKSFVKLVSWYDNEWGYSNRVLDLVGHMA 412
>IMGA|Medtr3g160060.1 Protein of unknown function CP12;
Glyceraldehyde-3-phosphate dehydrogenase, type I
chr03_pseudomolecule_IMGAG_V3 42055909-42059863 F
EGN_Mt090430 20090702
Length = 451
Score = 109 bits (273), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/124 (53%), Positives = 85/124 (68%), Gaps = 1/124 (0%)
Query: 22 NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRL-EKAATYEQIKAAIK 80
NI+P+STGAAKAV VLP L GKL G+A RVPT +VSVVDL V + +K + E + AA +
Sbjct: 291 NIVPTSTGAAKAVSLVLPQLKGKLNGIALRVPTPNVSVVDLVVNVAKKGISAEDVNAAFR 350
Query: 81 EESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYSTR 140
+ +EG LKG+L + LVS DF + SS D+ + + D VK+V+WYDNE GYS R
Sbjct: 351 KAAEGPLKGVLDVCDVPLVSVDFRCTDVSSTIDSSLTMVMGDDMVKVVAWYDNEWGYSQR 410
Query: 141 VVDL 144
VVDL
Sbjct: 411 VVDL 414
>IMGA|Medtr7g099600.1 Glyceraldehyde-3-phosphate dehydrogenase, type
I chr07_pseudomolecule_IMGAG_V3 22250718-22247269 F
EGN_Mt090430 20090702
Length = 404
Score = 108 bits (270), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/123 (51%), Positives = 84/123 (68%)
Query: 22 NIIPSSTGAAKAVGKVLPALNGKLTGMAFRVPTVDVSVVDLTVRLEKAATYEQIKAAIKE 81
NI+P+STGAAKAV VLP+L GKL G+A RVPT +VSVVDL V++ K E++ A ++
Sbjct: 273 NIVPTSTGAAKAVALVLPSLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNEAFRD 332
Query: 82 ESEGKLKGILGYVEEDLVSSDFIGDNRSSIFDAKAGIALNDKFVKLVSWYDNEVGYSTRV 141
+ +L GIL +E LVS DF + SS D+ + + D VK+++WYDNE GYS RV
Sbjct: 333 SAAKELSGILSVCDEPLVSVDFRCTDVSSTVDSSLTMVMGDDMVKVIAWYDNEWGYSQRV 392
Query: 142 VDL 144
VDL
Sbjct: 393 VDL 395