Jatropha Genome Database

JcCA0061381.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0061381.10 - phase: 0 
         (487 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g117100.1 Pyridoxal-dependent decarboxylase; ; chr07_...   546   e-156
IMGA|Medtr7g117140.1 Pyridoxal-dependent decarboxylase; ; chr07_...   544   e-155
IMGA|Medtr7g064800.1 Pyridoxal-dependent decarboxylase; ; chr07_...   535   e-152

>IMGA|Medtr7g117100.1 Pyridoxal-dependent decarboxylase; ;
           chr07_pseudomolecule_IMGAG_V3 27276097-27270341 E
           EGN_Mt090430 20090702
          Length = 532

 Score =  546 bits (1408), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 254/473 (53%), Positives = 335/473 (70%), Gaps = 2/473 (0%)

Query: 12  LDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDILKDV 71
           +D +  +++ +M+V+FI +YYK IE +PV SQVQPG+L   LP + P +PE L+ +L DV
Sbjct: 53  MDAEQLREQGHMMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPTHPESLQHVLNDV 112

Query: 72  TDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESLVMD 131
            + I+PG+THWQSPN+FAYF +N S AGFLGEML +G ++VGF+WISSPAATELE++V+D
Sbjct: 113 QEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLSIVGFSWISSPAATELETIVLD 172

Query: 132 WMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYASDQ 191
           W+             G GGGV+ G+  EA++  L AARDK L+T+G   + KL+ YASDQ
Sbjct: 173 WLAKALLLPHDFFSTGQGGGVIQGTASEAVLVVLVAARDKILRTVGRSALPKLVTYASDQ 232

Query: 192 THSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCATVGT 251
           THS+L K  ++ G+     R L T  ST F+LSP +LS+ I NDI  G  P FLCATVGT
Sbjct: 233 THSSLQKACQIAGLNPELCRLLKTDSSTNFALSPDVLSEAISNDIASGLTPFFLCATVGT 292

Query: 252 TACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMNPHKWL 311
           T+  AVDP+  LA++ K  N+W H+DAAYAGSACICPE+RH++DGVE ADS +MN HKW 
Sbjct: 293 TSSTAVDPLPALAKVTKPNNIWLHVDAAYAGSACICPEYRHFIDGVEEADSFNMNAHKWF 352

Query: 312 LTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKLWIV 371
           LTN DC  LW+K  + L+ SLS+  EFLKN  S+   +IDYKDWQI L RRF++LKLW+V
Sbjct: 353 LTNFDCSVLWVKDRSALIQSLSTNPEFLKNKASQENTVIDYKDWQIPLGRRFRSLKLWMV 412

Query: 372 IRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFR-LKPRNGTNDGRE 430
           +R +GL  L  HIRS I+LA  FE  V  D RF++V PR F+LVCFR L P+N  ++G +
Sbjct: 413 MRLYGLEGLRTHIRSHIALAVYFEELVVQDTRFKVVAPRTFSLVCFRLLPPQNSEDNGNK 472

Query: 431 LNTQLLAAVNQSGRAFLTHG-LAGGYFIRCAIGSTLTEERHVDELWKLIQXTA 482
           LN  LL AVN +G  F+TH  L+G Y +R A+G+ LTE RHV   W+++Q  A
Sbjct: 473 LNHDLLDAVNSTGDVFITHTVLSGEYILRLAVGAPLTEVRHVHAAWQILQEKA 525


>IMGA|Medtr7g117140.1 Pyridoxal-dependent decarboxylase; ;
           chr07_pseudomolecule_IMGAG_V3 27288261-27283149 E
           EGN_Mt090430 20090702
          Length = 506

 Score =  544 bits (1401), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 252/473 (53%), Positives = 335/473 (70%), Gaps = 2/473 (0%)

Query: 12  LDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDILKDV 71
           +D +  +++ +M+V+FI +YYK IE +PV SQVQPG+L   LP + P +PE L+ +L DV
Sbjct: 27  MDAEQLREQGHMMVDFIADYYKTIENFPVLSQVQPGYLGKLLPDSAPTHPESLQHVLNDV 86

Query: 72  TDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESLVMD 131
            + I+PG+THWQSPN+FAYF +N S AGFLGEML +G N+VGF+WI+SPAATELE++V+D
Sbjct: 87  QEKILPGVTHWQSPNYFAYFPSNSSIAGFLGEMLSAGLNIVGFSWITSPAATELETIVLD 146

Query: 132 WMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYASDQ 191
           W+             G GGGV+ G+  EA++  L AARDK L+T+G   + KL+ YASDQ
Sbjct: 147 WLAKALLLPPDFFSTGLGGGVIQGTASEAVLVVLLAARDKILRTVGRSALPKLVTYASDQ 206

Query: 192 THSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCATVGT 251
           THS+L K  ++ G+     R L T  ST F+LS  +LS+ I NDI  G  P FLCATVGT
Sbjct: 207 THSSLQKACQIGGLNPELCRLLKTDSSTSFALSSDVLSEAISNDIASGLIPFFLCATVGT 266

Query: 252 TACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMNPHKWL 311
           T+  AVDP+  LA++A+  N+WFH+DAAYAGSACICPE+RH++DGVE ADS +MN HKW 
Sbjct: 267 TSSTAVDPLPALAKVARTNNIWFHVDAAYAGSACICPEYRHFIDGVEEADSFNMNAHKWF 326

Query: 312 LTNMDCCCLWIKRPNLLVDSLSSEAEFLKNAVSESKAIIDYKDWQIALSRRFKALKLWIV 371
           LTN DC  LW+K  + L+ SLS+  E+LKN  S+   +IDYKDWQI L RRF++LKLW+V
Sbjct: 327 LTNFDCSVLWVKDRSALIQSLSTNPEYLKNKASQGNMVIDYKDWQIPLGRRFRSLKLWMV 386

Query: 372 IRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFR-LKPRNGTNDGRE 430
           +R +GL  L  HIR+ I+LA  FE  V  D RF++V PR F+LVCFR L P N  ++G +
Sbjct: 387 MRLYGLEGLRTHIRNHIALAAYFEELVGQDTRFKVVAPRTFSLVCFRLLPPPNSEDNGNK 446

Query: 431 LNTQLLAAVNQSGRAFLTHG-LAGGYFIRCAIGSTLTEERHVDELWKLIQXTA 482
           LN  LL AVN +G  F+TH  L+G Y +R A+G+ LTE RHV   W+++Q  A
Sbjct: 447 LNHDLLDAVNSTGNVFITHTVLSGEYILRFAVGAPLTEMRHVSAAWQILQEKA 499


>IMGA|Medtr7g064800.1 Pyridoxal-dependent decarboxylase; ;
           chr07_pseudomolecule_IMGAG_V3 13168638-13170280 E
           EGN_Mt090430 20090702
          Length = 523

 Score =  535 bits (1379), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 261/497 (52%), Positives = 342/497 (68%), Gaps = 20/497 (4%)

Query: 9   FSPLDTKTFKDESNMVVEFIEEYYKNIEKYPVQSQVQPGFLSSKLPKTPPYYPEPLEDIL 68
            +PLDT  FK + +M+++F+ +YY+NI  YPV SQV+P +L   LP   P  PEP+E IL
Sbjct: 1   MNPLDTTEFKKQGHMMIDFLADYYENISNYPVLSQVEPNYLKKLLPTFAPSNPEPIETIL 60

Query: 69  KDVTDTIIPGLTHWQSPNFFAYFQANVSNAGFLGEMLCSGFNVVGFNWISSPAATELESL 128
           +D    IIPG+THWQSPN+FAYF ++ S AGFLGEML +G NVVGFNWISSPAATELE++
Sbjct: 61  EDYQKYIIPGITHWQSPNYFAYFPSSGSTAGFLGEMLSTGLNVVGFNWISSPAATELENV 120

Query: 129 VMDWMGXXXXXXXXXXXXGTGGGVLHGSTCEAIVCTLAAARDKALQTIGWDKITKLIIYA 188
           V+DW+G            G GGGVL G+TCE I+ TL  ARDK L  IG +   KL++Y 
Sbjct: 121 VIDWLGEILNLPKSFLFKGGGGGVLLGTTCEGILGTLVVARDKILSKIGSENAGKLVVYG 180

Query: 189 SDQTHSTLFKGARLIGIPSSNIRNLPTSFSTGFSLSPQILSDTIDNDIKFGFYPLFLCAT 248
           SDQTH  + K A +IGI   N R + T     F+L P+ L  TI+ND+K G  P FLC T
Sbjct: 181 SDQTHCAVQKAAHIIGINPKNFRAIKTKKLNSFTLLPESLLSTIENDLKNGLVPCFLCVT 240

Query: 249 VGTTACGAVDPIKELAEIAKGYNLWFHIDAAYAGSACICPEFRHYLDGVESADSLSMNPH 308
           VGTT+  A+DP+++L  +AK Y +W HIDAAYAGSACICPEFR+ +DGVE ADS S+N H
Sbjct: 241 VGTTSTTAIDPVRKLCNVAKDYGIWVHIDAAYAGSACICPEFRYLIDGVEDADSFSLNAH 300

Query: 309 KWLLTNMDCCCLWIKRPNLLVDSLS-SEAEFLKNAVSESKAIIDYKDWQIALSRRFKALK 367
           KW LTN+DCCCLW+K PN L+  LS + +E+L+N+ S SK ++DYKDWQ+ LSRRF+ALK
Sbjct: 301 KWFLTNLDCCCLWLKDPNSLIKCLSTTNSEYLENSASNSKQVVDYKDWQVTLSRRFRALK 360

Query: 368 LWIVIRRHGLANLMYHIRSDISLAKRFESFVRNDKRFEIVVPRKFALVCFRLKPR-NGTN 426
           +W V+R +G+ NL   +R+ + +AK FE  V+ DKRFEI+VPRK A+VCFR+ P      
Sbjct: 361 VWFVLRSYGVENLRNFLRNHVEMAKTFEGLVKMDKRFEIIVPRKLAVVCFRILPYGKKVA 420

Query: 427 DGR-----------------ELNTQLLAAVNQSGRAFLTHGLAGGYF-IRCAIGSTLTEE 468
           DG+                 E+N +LL ++N SG  ++TH +  G F IRCAIG+TLTEE
Sbjct: 421 DGKVTNGEAKLISSEDVVANEINRKLLDSINASGDVYMTHAVVEGVFVIRCAIGATLTEE 480

Query: 469 RHVDELWKLIQXTAQTV 485
            HV + WK++Q  A  +
Sbjct: 481 LHVVKAWKVVQEHADVI 497