Jatropha Genome Database

JcCA0060881.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0060881.10 + phase: 0 /partial
         (93 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g071750.1 Protein of unknown function DUF1692 chr05_p...   159   3e-40
IMGA|Medtr5g071750.2 Protein of unknown function DUF1692 chr05_p...   158   5e-40
IMGA|Medtr4g110800.1 Thioredoxin fold chr04_pseudomolecule_IMGAG...    50   2e-07
IMGA|Medtr2g097210.1 Thioredoxin-like fold chr02_pseudomolecule_...    45   6e-06

>IMGA|Medtr5g071750.1 Protein of unknown function DUF1692
           chr05_pseudomolecule_IMGAG_V3 25475004-25465316 E
           EGN_Mt090430 20090702
          Length = 386

 Score =  159 bits (402), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 75/85 (88%), Positives = 79/85 (92%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S LRLYLHA TETKLVVDTSRGETLRINFDVTFPAL CSI+SLDAMDISGEQHLDV+
Sbjct: 42  LFFSELRLYLHAATETKLVVDTSRGETLRINFDVTFPALACSIVSLDAMDISGEQHLDVR 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAP 92
           HDIIKKR+DSHGNVIE RQDGIG+P
Sbjct: 102 HDIIKKRIDSHGNVIETRQDGIGSP 126


>IMGA|Medtr5g071750.2 Protein of unknown function DUF1692
           chr05_pseudomolecule_IMGAG_V3 25475004-25465316 E
           EGN_Mt090430 20090702
          Length = 312

 Score =  158 bits (400), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 75/85 (88%), Positives = 79/85 (92%)

Query: 8   LALSNLRLYLHAVTETKLVVDTSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVK 67
           L  S LRLYLHA TETKLVVDTSRGETLRINFDVTFPAL CSI+SLDAMDISGEQHLDV+
Sbjct: 42  LFFSELRLYLHAATETKLVVDTSRGETLRINFDVTFPALACSIVSLDAMDISGEQHLDVR 101

Query: 68  HDIIKKRLDSHGNVIEARQDGIGAP 92
           HDIIKKR+DSHGNVIE RQDGIG+P
Sbjct: 102 HDIIKKRIDSHGNVIETRQDGIGSP 126


>IMGA|Medtr4g110800.1 Thioredoxin fold chr04_pseudomolecule_IMGAG_V3
           25223896-25232907 E EGN_Mt090430 20090702
          Length = 477

 Score = 50.4 bits (119), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 4/71 (5%)

Query: 8   LALSNLRLYLHAVTETKLVVD-TSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDV 66
           + LSN   Y    T T ++VD +S G+ LRI+F+ +FPAL C   S+D  D+ G   L++
Sbjct: 44  MELSN---YFAVTTSTSVIVDKSSDGDFLRIDFNFSFPALSCEFASVDVSDVLGTNRLNI 100

Query: 67  KHDIIKKRLDS 77
              + K  +DS
Sbjct: 101 TKTVRKFSIDS 111


>IMGA|Medtr2g097210.1 Thioredoxin-like fold
           chr02_pseudomolecule_IMGAG_V3 22752875-22746360 H
           EGN_Mt090430 20090702
          Length = 482

 Score = 45.4 bits (106), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)

Query: 13  LRLYLHAVTETKLVVD-TSRGETLRINFDVTFPALPCSILSLDAMDISGEQHLDVKHDII 71
           L  YL   T T +++D +S GE LRI+F+++F AL C   S+D  D+ G   +++   + 
Sbjct: 46  LNEYLSVHTSTSVIIDKSSDGEFLRIDFNLSFHALSCEFASVDVSDVLGTNRMNLTKTVR 105

Query: 72  KKRLDS 77
           K  +DS
Sbjct: 106 KFSIDS 111