Jatropha Genome Database
- JcCA0046261.50
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0046261.50 + phase: 2 /TE/partial
(169 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 121 1e-28
IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA po... 119 7e-28
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 112 8e-26
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 106 4e-24
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 106 6e-24
IMGA|Medtr7g135120.1 Copia protein, related chr07_pseudomolecule... 76 6e-15
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 75 1e-14
IMGA|Medtr8g044880.1 polyprotein-like, putative chr08_pseudomole... 72 1e-13
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 72 1e-13
IMGA|AC235756_37.1 Copia protein, related AC235756.1 212505-2122... 72 1e-13
IMGA|Medtr8g043360.1 Copia protein, related chr08_pseudomolecule... 67 4e-12
IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H... 65 1e-11
IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG... 63 9e-11
IMGA|Medtr4g045010.1 Polynucleotidyl transferase, Ribonuclease H... 61 2e-10
IMGA|Medtr4g045170.1 hypothetical protein chr04_pseudomolecule_I... 61 3e-10
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 59 9e-10
IMGA|Medtr5g049090.1 Polynucleotidyl transferase, Ribonuclease H... 56 8e-09
IMGA|Medtr4g025100.1 Integrase, catalytic region; Zinc finger, C... 52 1e-07
IMGA|Medtr4g104330.1 hypothetical protein chr04_pseudomolecule_I... 51 3e-07
IMGA|Medtr7g046200.1 Polynucleotidyl transferase, Ribonuclease H... 50 8e-07
IMGA|Medtr2g037300.1 Polynucleotidyl transferase, Ribonuclease H... 48 2e-06
IMGA|Medtr3g101200.1 Polynucleotidyl transferase, Ribonuclease H... 48 3e-06
IMGA|AC235488_16.1 Polynucleotidyl transferase, Ribonuclease H f... 47 4e-06
IMGA|Medtr7g021510.1 Integrase, catalytic region; Zinc finger, C... 46 8e-06
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 121 bits (304), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 88/147 (59%)
Query: 14 DSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRK 73
D+DWAG LD KS TG CF LG+++I W T+KQ +V++S+ WL
Sbjct: 1095 DADWAGCLDTRKSVTGQCFFLGNSLISWRTKKQTTVSRSSSEAEYRALASATCEIQWLLY 1154
Query: 74 VLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCN 133
+L DL+ P + CDN+SA+ + NP+FH +TKH++I H +RE + ++++ +
Sbjct: 1155 LLNDLHITCSKPPVLYCDNQSALHIAANPVFHERTKHLEIDCHIVREKLQAGVLKLLPVS 1214
Query: 134 SEDQTADIFTKALQKPRFEFLRNRLGV 160
S+DQ AD FTKAL F L ++LG+
Sbjct: 1215 SQDQIADFFTKALLPKTFSLLLSKLGL 1241
>IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33218578-33217607 H EGN_Mt090430 20090702
Length = 309
Score = 119 bits (298), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 58/147 (39%), Positives = 87/147 (59%)
Query: 14 DSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRK 73
DSDWA +ST+G+ LGSA I W T+KQ++V++S+ IWLR
Sbjct: 156 DSDWASCPLTRRSTSGYLMKLGSAPISWKTKKQSTVSKSSSEAEYRAMGQAVSEVIWLRS 215
Query: 74 VLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCN 133
+L L ++PT +LCDN++A+ + NP++H +TKHI++ H IR +E I +
Sbjct: 216 LLSSLQVHYDSPTVLLCDNQAAMHLAANPVYHERTKHIEVDCHFIRTHLQEGTISTSYVP 275
Query: 134 SEDQTADIFTKALQKPRFEFLRNRLGV 160
++ Q ADIFTKAL +F+ L +LGV
Sbjct: 276 TKKQQADIFTKALGAKQFQELTFKLGV 302
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 112 bits (280), Expect = 8e-26, Method: Composition-based stats.
Identities = 53/147 (36%), Positives = 87/147 (59%)
Query: 14 DSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRK 73
D+DWAG +D +S +G CF LG+++I W T+KQ +V++S+ W+
Sbjct: 1249 DADWAGCIDTRRSISGQCFFLGNSLISWRTKKQITVSKSSSEAEYRALASATCELQWILY 1308
Query: 74 VLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCN 133
+L DL+ + CDN+SA+ + NP+FH +TKH++I H IR+ + ++++ +
Sbjct: 1309 LLKDLHTTCPKLPVLYCDNQSAIHIANNPVFHERTKHLEIDCHLIRDKLQSGVLKLLTVS 1368
Query: 134 SEDQTADIFTKALQKPRFEFLRNRLGV 160
S+DQ AD FTKAL F L ++LG+
Sbjct: 1369 SQDQVADFFTKALLPKPFNILLSKLGL 1395
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 106 bits (265), Expect = 4e-24, Method: Composition-based stats.
Identities = 54/147 (36%), Positives = 82/147 (55%)
Query: 14 DSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRK 73
D+DWAG LD +S +G CF LG ++I W T+KQ +V++S+ WL
Sbjct: 1240 DADWAGCLDSRRSISGQCFFLGHSLISWKTKKQLTVSRSSSEAEYRALGAATCELQWLLY 1299
Query: 74 VLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCN 133
+L DL+ + CDN+SA+ + NP+FH +TKH++I H +RE + ++++
Sbjct: 1300 LLHDLHVTTVKLHVLYCDNQSALHIAANPVFHERTKHLEIDCHLVREKLQACIMKLLPVT 1359
Query: 134 SEDQTADIFTKALQKPRFEFLRNRLGV 160
S DQ AD FTK L F L +LG+
Sbjct: 1360 SADQLADFFTKPLLPQPFHTLLFKLGM 1386
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 106 bits (265), Expect = 6e-24, Method: Composition-based stats.
Identities = 50/138 (36%), Positives = 80/138 (57%)
Query: 14 DSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRK 73
D+DWAG LD +S +G CF LG+++I W T+KQ +V++S+ WL
Sbjct: 1223 DADWAGCLDTRRSISGQCFFLGNSLISWRTKKQVTVSRSSSEAEYRALASATCELQWLIY 1282
Query: 74 VLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCN 133
+L DL+ + CDN+SA+ + NP+FH +TKH++I H +RE ++++ +
Sbjct: 1283 LLQDLHVTCTKLPVLFCDNQSALHIAANPVFHERTKHLEIDCHIVREKLHSGILKLLPVS 1342
Query: 134 SEDQTADIFTKALQKPRF 151
S++Q AD FTK+L F
Sbjct: 1343 SKEQVADFFTKSLHPQPF 1360
>IMGA|Medtr7g135120.1 Copia protein, related
chr07_pseudomolecule_IMGAG_V3 32083970-32083668 H
EGN_Mt090430 20090702
Length = 100
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 57/87 (65%)
Query: 75 LVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCNS 134
+++L E K+ DNKSA+ + KN IFHGK KH++ ++H +R+ +NE+ + +C +
Sbjct: 1 MIELKIGDEVAVKLKSDNKSAINLAKNSIFHGKRKHVETRFHFMRDQVNKNELIVEYCPT 60
Query: 135 EDQTADIFTKALQKPRFEFLRNRLGVC 161
+DQ D+FTKAL++ +F LR + V
Sbjct: 61 QDQLTDLFTKALKRDQFLKLRREIRVV 87
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 75.1 bits (183), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 34/147 (23%)
Query: 14 DSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRK 73
D+DWAG D +S +G CF LG ++I W T+KQ +V++S+
Sbjct: 590 DADWAGCRDTRRSISGQCFFLGDSLISWRTKKQLTVSRSSSE------------------ 631
Query: 74 VLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCN 133
+ ++ A NP+FH +TKH++I H +RE ++++ +
Sbjct: 632 ----------------AEYRALGAATSNPVFHERTKHLEIDCHIVREKLAAGIMKLLPIS 675
Query: 134 SEDQTADIFTKALQKPRFEFLRNRLGV 160
S++Q AD FTK++ F L +LG+
Sbjct: 676 SKNQLADCFTKSILPQPFNSLLFKLGL 702
>IMGA|Medtr8g044880.1 polyprotein-like, putative
chr08_pseudomolecule_IMGAG_V3 10147539-10149356 H
EGN_Mt090430 20090702
Length = 196
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 14 DSDWA-GSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLR 72
++DWA G D +S + CF CW + + A ++ L
Sbjct: 30 NADWAVGCKDTRRSISEQCF------FCWSSSEAEYRALASATCELQR----------LT 73
Query: 73 KVLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHC 132
+L DL P + CDN+SA+ + NP+FH TKH++I H +RE + +++
Sbjct: 74 YLLRDLKVNCIKPPVLYCDNQSAIYIAANPVFHECTKHLEIDCHIVREKLQAGLFKLLPI 133
Query: 133 NSEDQTADIFTKALQKPRFEFLRNRLGV 160
+S+DQ AD FTK+L F L ++LG+
Sbjct: 134 SSKDQVADFFTKSLLPQPFNPLLSKLGM 161
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 72.4 bits (176), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 2/125 (1%)
Query: 6 TAIDASVVDSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXX 65
+ ID S D+DW D + TT F F L A I W ++KQ VA S+
Sbjct: 441 SMIDYS--DADWCRDKRDRRRTTSFLFMLQGAPISWSSKKQPIVALSSCEVEYVVGSSAA 498
Query: 66 XXXIWLRKVLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKEN 125
WL+ VL + + P K+L DNK A+ + KN I HGK+KHI+ K+H +R+ +
Sbjct: 499 CQANWLQNVLEQSMIKLKQPIKLLIDNKYAINLAKNHISHGKSKHIETKFHYLRDQVNKC 558
Query: 126 EIQII 130
+I I+
Sbjct: 559 KINIV 563
>IMGA|AC235756_37.1 Copia protein, related AC235756.1 212505-212236
H EGN_Mt090430 20090702
Length = 89
Score = 72.0 bits (175), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%)
Query: 77 DLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCNSED 136
+L+ + + P K+ DN+S + + KNPI G++KHIK ++H IRE + I++ +C +E
Sbjct: 3 ELHCEVKKPLKLKIDNRSTINLAKNPIARGRSKHIKARFHFIREQVTKEMIEVEYCPTEV 62
Query: 137 QTADIFTKALQKPRFEFLRNRLGV 160
Q D FTKA + RF LR++LG+
Sbjct: 63 QLGDGFTKAFKIDRFTCLRDKLGL 86
>IMGA|Medtr8g043360.1 Copia protein, related
chr08_pseudomolecule_IMGAG_V3 9348610-9348290 H
EGN_Mt090430 20090702
Length = 106
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 57/87 (65%)
Query: 69 IWLRKVLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQ 128
+W+ + +LN + + K+L DNKS + + +PI HG +KHI+ K+H +R+ + ++
Sbjct: 8 LWIEMLSEELNAFEVDRIKLLVDNKSTIDLADHPISHGISKHIERKFHFLRDQVNKMKLD 67
Query: 129 IIHCNSEDQTADIFTKALQKPRFEFLR 155
+ +CN+E Q A+IFTK L+K F+ L+
Sbjct: 68 LEYCNTEVQLANIFTKPLKKAMFDELK 94
>IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
36507044-36505941 H EGN_Mt090430 20090702
Length = 367
Score = 65.5 bits (158), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%)
Query: 70 WLRKVLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQI 129
WL +L D N Q P + CD++SA + N FH +TKHI++ H +RE ++ +
Sbjct: 270 WLTYLLQDFNLQFHTPALLYCDSQSARHIAANTSFHERTKHIELDCHIVREKLQQKLFHL 329
Query: 130 IHCNSEDQTADIFTKALQKPRFEFLRNRLGV 160
+ +S Q AD+ TK L F ++LG+
Sbjct: 330 LPVSSSQQLADVLTKPLDPLPFSNFISKLGL 360
>IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG_V3
9341518-9340611 H EGN_Mt090430 20090702
Length = 155
Score = 62.8 bits (151), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%)
Query: 19 GSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRKVLVDL 78
G DD KSTT + F +G+A I W ++KQ VA S+ +W+ +L +L
Sbjct: 66 GDQDDKKSTTCYLFMIGAAPISWSSKKQGIVALSSSEAKYVATSYAACQALWIEMLLEEL 125
Query: 79 NFQQENPTKILCDNKSAVAMVKNPIFHGK 107
N + + K+L DNK A+ + PI HGK
Sbjct: 126 NAFEVDRIKLLVDNKLAIDLADRPISHGK 154
>IMGA|Medtr4g045010.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
10571280-10570869 H EGN_Mt090430 20090702
Length = 106
Score = 61.2 bits (147), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 90 CDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCNSEDQTADIFTKALQ-- 147
DN S + + KNPI HG++KHI++++H +RE + ++++ H SE+Q AD+ TK ++
Sbjct: 29 IDNISTINLAKNPIAHGRSKHIEMRFHYLREQVSKGKLKLEHSKSENQIADVLTKGVKIE 88
Query: 148 ---KPR 150
KPR
Sbjct: 89 VFTKPR 94
>IMGA|Medtr4g045170.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 10725937-10725201 H
EGN_Mt090430 20090702
Length = 197
Score = 60.8 bits (146), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 5/66 (7%)
Query: 90 CDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCNSEDQTADIFTKALQ-- 147
DN S + + KNPI HG++KHI++++H +RE + ++++ H SE+Q AD+ TK ++
Sbjct: 120 IDNISTINLAKNPIAHGRSKHIEMRFHYLREQVSKGKLKLEHSKSENQIADVLTKGVKIE 179
Query: 148 ---KPR 150
KPR
Sbjct: 180 VFTKPR 185
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 14 DSDWAGSLDDMKSTTGFCFSLGSAVICWGTRKQASVAQSTXXXXXXXXXXXXXXXIWLRK 73
D DWAG +D +S +G CF +G+++I W T+KQ +V++S+ W+
Sbjct: 180 DVDWAGCVDSRRSISGQCFFIGNSLISWRTKKQTTVSRSSSEAEYRALASATCELQWILY 239
Query: 74 VLVDLNFQQENPTKILCDNK 93
+L DLN Q + CDN+
Sbjct: 240 LLKDLNIQSSKLPVLFCDNQ 259
>IMGA|Medtr5g049090.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr05_pseudomolecule_IMGAG_V3
20905948-20906136 H EGN_Mt090430 20090702
Length = 62
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 105 HGKTKHIKIKYHAIREAEKENEIQIIHCNSEDQTADIFTKALQKPRFEFLRNRLGV 160
HG+ KHI +++H R+ ++ +++ HCNS+DQ DI TK L+ F LR +LGV
Sbjct: 2 HGRCKHINVRFHFFRDLPQDGVMELKHCNSQDQLVDIMTKPLKLETFCKLRAKLGV 57
>IMGA|Medtr4g025100.1 Integrase, catalytic region; Zinc finger,
CCHC-type; Retrotransposon gag protein, putative
chr04_pseudomolecule_IMGAG_V3 5913545-5913860 H
EGN_Mt090430 20090702
Length = 84
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 70 WLRKVLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKE 124
W+ L D +P I CDN S++ +V NP+FH +TKHI+I H +R+ K
Sbjct: 13 WILYFLDDFPIPHSSPIIIYCDNNSSMHIVANPVFHERTKHIEIDCHVVRDKIKH 67
>IMGA|Medtr4g104330.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 22711685-22712637 H
EGN_Mt090430 20090702
Length = 196
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 34/52 (65%)
Query: 101 NPIFHGKTKHIKIKYHAIREAEKENEIQIIHCNSEDQTADIFTKALQKPRFE 152
NPIFHGK+K I+ + H + + +N + + +C ++DQ AD+ T ++P FE
Sbjct: 135 NPIFHGKSKRIETRLHFLSDQVNKNTLSVEYCPTQDQLADLVTSYEERPVFE 186
>IMGA|Medtr7g046200.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr07_pseudomolecule_IMGAG_V3
11303402-11302786 H EGN_Mt090430 20090702
Length = 126
Score = 49.7 bits (117), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 87 KILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCNSEDQTADIFTKAL 146
K+L DN S + + +P+ H ++K+I+ K + R + + ++ HCN+E Q ADIF K
Sbjct: 31 KLLVDNNSTIDLHNHPMSHRRSKNIERKLNFQRNQVNKKKPEMEHCNTEMQHADIFAKPS 90
Query: 147 QKPRFEFLR 155
+K RF+ L+
Sbjct: 91 KKARFDELK 99
>IMGA|Medtr2g037300.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr02_pseudomolecule_IMGAG_V3
10080348-10077273 E EGN_Mt090430 20090702
Length = 117
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 5/66 (7%)
Query: 87 KILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQIIHCNSEDQTADIFTKAL 146
++L DNKS + +NPI HGK IKYH +R+ +N+I + + + D DI TK L
Sbjct: 10 EMLVDNKSTLNHTRNPIIHGK-----IKYHFLRDQVNKNKIILTYYETYDLVVDILTKPL 64
Query: 147 QKPRFE 152
+ R E
Sbjct: 65 KIQRDE 70
>IMGA|Medtr3g101200.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr03_pseudomolecule_IMGAG_V3
24473302-24473120 H EGN_Mt090430 20090702
Length = 60
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 32/43 (74%)
Query: 87 KILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQI 129
K+L DNKSA+ VKNPI HGK+KHI ++H +R+ + +I++
Sbjct: 9 KLLIDNKSAINFVKNPIAHGKSKHIDTRFHYLRDQVNKCKIKV 51
>IMGA|AC235488_16.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative AC235488.1 64684-64944 H EGN_Mt090430
20090702
Length = 86
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 70 WLRKVLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIR 119
WL ++ LN +++ ++L D+KS + + K+ + HG++KHI+ ++H +R
Sbjct: 8 WLSMMMQYLNLKEDEKMRLLLDSKSTIDLAKHLVAHGRSKHIETRFHYLR 57
>IMGA|Medtr7g021510.1 Integrase, catalytic region; Zinc finger,
CCHC-type; Retrotransposon gag protein, putative
chr07_pseudomolecule_IMGAG_V3 5264429-5264084 H
EGN_Mt090430 20090702
Length = 98
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 48/91 (52%), Gaps = 21/91 (23%)
Query: 70 WLRKVLVDLNFQQENPTKILCDNKSAVAMVKNPIFHGKTKHIKIKYHAIREAEKENEIQI 129
W++ +L+DLN + P + C++++A+ + K +FH +TK+I++ H I
Sbjct: 10 WIKSLLLDLNILHKGPMLLNCNSQTALHIAKKLVFHYRTKYIQVDCHFIY---------- 59
Query: 130 IHCNSEDQTADIFTKALQKPRFEFLRNRLGV 160
+FTKAL++ +F+ + ++ +
Sbjct: 60 -----------LFTKALERHQFQTVLGKMAI 79