Jatropha Genome Database

JcCA0045701.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045701.10 - phase: 0 
         (247 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g019470.1 BZR1, transcriptional repressor chr05_pseud...   206   7e-54
IMGA|Medtr5g019470.2 BZR1, transcriptional repressor chr05_pseud...   204   4e-53
IMGA|Medtr2g091180.1 BZR1, transcriptional repressor chr02_pseud...    55   4e-08

>IMGA|Medtr5g019470.1 BZR1, transcriptional repressor
           chr05_pseudomolecule_IMGAG_V3 7256044-7258532 E
           EGN_Mt090430 20090702
          Length = 323

 Score =  206 bits (525), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/250 (51%), Positives = 143/250 (57%), Gaps = 11/250 (4%)

Query: 5   GSKPP-PLEIAGTPTNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRFDA--NP 61
           GSK P P E+ GTPTN+                                   R D   NP
Sbjct: 76  GSKRPLPNEMGGTPTNMSACSSMQPSPQSSSFPSPQSSSFPSPIPSYPTSPTRMDGITNP 135

Query: 62  STYLLPFLRNIASIPANLPQLRISNSAPVTPPLSSPTNRSSKRKADWESFSNGPLNS-FR 120
           S++LLPF+RNI SIP NLP LRISNSAPVTPPLSSP  RSSKRKAD+ES  NG  NS FR
Sbjct: 136 SSFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSP--RSSKRKADFESLCNGSFNSSFR 193

Query: 121 HPLFPVSAPSSPTRRQHLTPATIPECDESDASTVDSGRWVSFXXXXXXXXX-XSPTFNLV 179
           HPLF  SAPSSP+RR HL P+TIPECDESDASTVDSGRWVSF           SPTFNL+
Sbjct: 194 HPLFATSAPSSPSRRNHLPPSTIPECDESDASTVDSGRWVSFQTTTAHGAAPPSPTFNLM 253

Query: 180 KPIG----QQSMFQDGIDHXXXXXXXXXXXXXXXXXXXXXXXXXVKPWEGERIHEIGVDD 235
           KP      Q SM    ++                          VKPWEGERIHE+G+++
Sbjct: 254 KPAMQITPQSSMDMKHMNEAMQWSAGSATERGRGSDFDFENGRVVKPWEGERIHEVGMEE 313

Query: 236 LELTLGSAKA 245
           LELTLG  KA
Sbjct: 314 LELTLGFGKA 323


>IMGA|Medtr5g019470.2 BZR1, transcriptional repressor
           chr05_pseudomolecule_IMGAG_V3 7256044-7258532 E
           EGN_Mt090430 20090702
          Length = 239

 Score =  204 bits (518), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 115/192 (59%), Positives = 128/192 (66%), Gaps = 8/192 (4%)

Query: 60  NPSTYLLPFLRNIASIPANLPQLRISNSAPVTPPLSSPTNRSSKRKADWESFSNGPLNS- 118
           NPS++LLPF+RNI SIP NLP LRISNSAPVTPPLSSP  RSSKRKAD+ES  NG  NS 
Sbjct: 50  NPSSFLLPFIRNITSIPTNLPPLRISNSAPVTPPLSSP--RSSKRKADFESLCNGSFNSS 107

Query: 119 FRHPLFPVSAPSSPTRRQHLTPATIPECDESDASTVDSGRWVSFXXXXXXXXX-XSPTFN 177
           FRHPLF  SAPSSP+RR HL P+TIPECDESDASTVDSGRWVSF           SPTFN
Sbjct: 108 FRHPLFATSAPSSPSRRNHLPPSTIPECDESDASTVDSGRWVSFQTTTAHGAAPPSPTFN 167

Query: 178 LVKPIG----QQSMFQDGIDHXXXXXXXXXXXXXXXXXXXXXXXXXVKPWEGERIHEIGV 233
           L+KP      Q SM    ++                          VKPWEGERIHE+G+
Sbjct: 168 LMKPAMQITPQSSMDMKHMNEAMQWSAGSATERGRGSDFDFENGRVVKPWEGERIHEVGM 227

Query: 234 DDLELTLGSAKA 245
           ++LELTLG  KA
Sbjct: 228 EELELTLGFGKA 239


>IMGA|Medtr2g091180.1 BZR1, transcriptional repressor
           chr02_pseudomolecule_IMGAG_V3 20515763-20511531 E
           EGN_Mt090430 20090702
          Length = 323

 Score = 55.1 bits (131), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 39/80 (48%), Positives = 49/80 (61%), Gaps = 9/80 (11%)

Query: 65  LLPFLRNIASIPA-----NLPQLRI---SNSAPVTPPLSSPTNRSSKRKADWESFSNGP- 115
           L+P+L+N++S  +      LPQL I   S SAPVTPPLSSPT RS +RKADWE  S  P 
Sbjct: 130 LIPWLKNLSSGSSSASSSKLPQLYIHTGSISAPVTPPLSSPTARSPQRKADWEDQSTRPG 189

Query: 116 LNSFRHPLFPVSAPSSPTRR 135
               ++   P S P SP R+
Sbjct: 190 WGGQQYSFQPSSTPPSPGRQ 209