Jatropha Genome Database
- JcCA0045571.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0045571.20 + phase: 0 /TE
(1346 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 272 1e-72
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 252 8e-67
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 241 1e-63
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 231 2e-60
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 220 4e-57
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 196 5e-50
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 187 3e-47
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 178 2e-44
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 170 4e-42
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 154 3e-37
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 144 3e-34
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 141 2e-33
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 134 4e-31
IMGA|Medtr8g044870.1 Reverse transcriptase, identical chr08_pseu... 129 1e-29
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 128 2e-29
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 127 4e-29
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 123 7e-28
IMGA|Medtr6g077130.1 Zinc finger, CCHC-type chr06_pseudomolecule... 115 2e-25
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 108 3e-23
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 103 7e-22
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 100 5e-21
IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin, se... 93 1e-18
IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin, se... 93 1e-18
IMGA|Medtr3g044280.1 hypothetical retrotransposon, related chr03... 92 2e-18
IMGA|Medtr5g082230.1 hypothetical retrotransposon, related chr05... 92 2e-18
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 82 1e-15
IMGA|Medtr6g069750.1 Reverse transcriptase, putative chr06_pseud... 82 2e-15
IMGA|Medtr8g128700.1 Integrase, catalytic region chr08_pseudomol... 81 3e-15
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 74 3e-13
IMGA|Medtr1g076760.1 hypothetical protein chr01_pseudomolecule_I... 72 2e-12
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 71 3e-12
IMGA|Medtr4g019480.1 Integrase, catalytic region chr04_pseudomol... 66 1e-10
IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA po... 66 1e-10
IMGA|Medtr5g089840.1 copia LTR rider, related chr05_pseudomolecu... 64 4e-10
IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative chr... 61 3e-09
IMGA|Medtr3g044010.1 hypothetical protein chr03_pseudomolecule_I... 59 1e-08
IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related ... 59 2e-08
IMGA|Medtr3g097840.1 hypothetical protein chr03_pseudomolecule_I... 55 3e-07
IMGA|Medtr7g116810.1 hypothetical protein chr07_pseudomolecule_I... 54 5e-07
IMGA|Medtr8g012170.1 polyprotein, putative chr08_pseudomolecule_... 54 5e-07
IMGA|Medtr4g110620.1 polyprotein-like, related chr04_pseudomolec... 54 8e-07
IMGA|Medtr1g102740.1 gag-pol polyprotein, related chr01_pseudomo... 52 2e-06
IMGA|Medtr5g046390.1 gag-pol polyprotein, related chr05_pseudomo... 52 2e-06
IMGA|Medtr4g104320.1 hypothetical protein chr04_pseudomolecule_I... 51 3e-06
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 50 5e-06
IMGA|Medtr1g102780.1 gag-pol polyprotein, related chr01_pseudomo... 50 7e-06
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 272 bits (695), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 216/728 (29%), Positives = 321/728 (44%), Gaps = 91/728 (12%)
Query: 297 WVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKDV 356
W +DSGA H S F+S+ N V + + + V G I ++DV
Sbjct: 381 WFLDSGANEHIVSSTHWFTSFHKINPKPVNLPNGTSVLVEYAGTIHFT----PHFYIEDV 436
Query: 357 VHVPDMHSNLISIGRLDDENFC-STFRKGQWKL--TKGSMVIANGRKDPKLYVMHAKLSL 413
++ P NLISI ++ C ++F + L +I G + L
Sbjct: 437 LYSPSFTLNLISIFKVCSSLHCYASFHDKKCFLQDLHSQKMIGLGEQVRGLLG------- 489
Query: 414 DAFNVANDNSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAGKHNRVAF 473
+V+N KRL HMS T V N+ C C K +++F
Sbjct: 490 ---HVSN---------KRLNHMSHLYPTLTVDNH----------ATCDICQFAKQKKLSF 527
Query: 474 KISXPSRMKNVLDLVHSDLCGPLTM-SYGGNRYFITFIDDHSKKTWVYTLKSKDEVLDVF 532
S S + +L+H D+ GPL + S +RYF+T +DD+S W+ LKSK EV
Sbjct: 528 PTS-VSVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKYEVSQHV 586
Query: 533 KQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQTTPPKMPQLNSLAERMNR 592
K F+NL+ Q K +R+DNG E+ + ++F GI H + + PQ N ER ++
Sbjct: 587 KNFINLIHTQYHITPKVVRSDNGPEF--LLNSFYASKGIVHHKSCVETPQQNGRVERKHQ 644
Query: 593 TLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRV 652
++ R LL +KL +W ALL A+ +INR L +P ++ G +V
Sbjct: 645 HILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLHNKSPYQLLHGTIPDVQTFKV 704
Query: 653 FGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKMIRSRDVVFVEN-QT 711
FG + + R+KL + R+ VF+GY GY +++ SR V F E+
Sbjct: 705 FGSLCYSTTLQSHRTKLSARARKTVFLGYAVGYKGYVLLDIHTREIHISRHVQFHEHILP 764
Query: 712 IEDVEKTQKEAADRSEDDSTDVXIVLPTTEQRQVGDEENVPQEQEPELKNPEVPYQNEPE 771
T D DS LP + P P
Sbjct: 765 YPTNPSTITTTWDYFSSDSCSASNPLPKSSTISPIIPPPFIDVDTP------------PS 812
Query: 772 DDFDGVHVQPPAPEGSQTLRRSNRIRQPST----------------RYSANEYV------ 809
DD V P P +R+S+RI QP T +Y + Y+
Sbjct: 813 DDNHSVSPIPQPP----VIRKSSRITQPPTHLQDYVCSVSDDTSFVQYPISHYLSYNNLS 868
Query: 810 -------LMTDG-GEPECFEEAMENEHKRNXIEAMQDEMKSLHENKTFEXXXXXXXXXXX 861
L D EP + EA + + + +AMQ E+ +L T++
Sbjct: 869 SSHCAFALSLDSHTEPTTYAEASKFDCWK---QAMQVELSALENTGTWKLVDLPPNVKPI 925
Query: 862 XXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLRMAASFN 921
W+++IK S R+KARLV KG+NQ +G+D+ + +SPV K+T++RT++ +A N
Sbjct: 926 VCRWIYKIKHHADGSIERYKARLVAKGYNQIEGLDYFDTYSPVAKLTTVRTIIALAYMNN 985
Query: 922 LEIEQMDVKTAFLHSDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWYXKFE 981
I Q+DV AFLH DL+E++YM P+G I K N VCKL KSLYGLKQA R+WY K
Sbjct: 986 WHIHQLDVNNAFLHGDLQEDVYMIVPQG-ITPSKSNQVCKLIKSLYGLKQASRKWYEKLT 1044
Query: 982 SIIGEQGY 989
S++ Y
Sbjct: 1045 SLLVHHHY 1052
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 252 bits (644), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 201/729 (27%), Positives = 327/729 (44%), Gaps = 97/729 (13%)
Query: 296 SWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKD 355
SW+IDSGA H + +F+S+ +V + + + V G++ L L
Sbjct: 350 SWIIDSGANDHVCFSKTHFTSFYKIKPVLVTLPNGTSIYVHYAGNVHFT----PYLHLTH 405
Query: 356 VVHVPDMHSNLISIGRLDDENFCST-FRKGQWKL--TKGSMVIANGRKDPKLY--VMH-- 408
V++ P+ NLIS+ ++ D CS F + + +I G K LY MH
Sbjct: 406 VLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFV 465
Query: 409 --------------AKLSLDAFNVANDNSAV-------------ELWHKRLGHMSEKGMT 441
K++ A N++ + + LWH RLGH+S + ++
Sbjct: 466 NQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLS 525
Query: 442 TLVKNNMLSGLDKVHLEKCSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTMSY- 500
T+ + + + + C C +H ++ F S S + L+H D+ GPL ++Y
Sbjct: 526 TMSR--LYPSIIVDNKAACDICHFARHKKLPFPHS-SSHANSKFQLLHFDIWGPLAINYV 582
Query: 501 GGNRYFITFIDDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG 560
G++YF+T +DDH++ W+ LKSK EV K F+ L+E Q K IRTDNG E+
Sbjct: 583 HGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEF-- 640
Query: 561 IFDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAV 620
+ F GI HQ + + PQ N ER ++ ++ R LL +KL FW A L AV
Sbjct: 641 LLHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 621 HLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIG 680
LINR + LQ +P ++ +VFGC + + R+KL+ + R+ VF+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 681 YGQDQFGYRFFYPLQKKMIRSRDVVFVENQTIEDVEKTQKEAADRSEDDSTDVXIVLPTT 740
Y G + +++ SR VVF E + + ++ D S + LP+
Sbjct: 761 YKSGFKGSVLYDLHTREIFISRHVVFHE-CVLPYKSNSSPQSHDWEYFTSFSTPLDLPS- 818
Query: 741 EQRQVGDEENVPQEQEPELKNPEVPYQNEPEDDFDG-VHVQPPAPEGSQTLRRSNRIRQP 799
+ P ++ VPY + + + PP P R S+R + P
Sbjct: 819 ------GTDTSPHSAITDI----VPYTSPTPTSTSSIIDIPPPLPT-----RHSSRNKTP 863
Query: 800 STRY------------------------------SANEYVL-MTDGGEPECFEEAMENEH 828
+ S + ++L + EP+ + EA + E
Sbjct: 864 PSYLKDFICANKSSASVNSLHSISNFVSYHNISNSHSHFILSLHAHTEPKSYTEANKFEC 923
Query: 829 KRNXIEAMQDEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKG 888
R +AMQ E+ +L T++ W++++K + R+KARLV KG
Sbjct: 924 WR---QAMQVELTALENTGTWKIIDLPSNAKPIGCRWIYKVKHHADGTIERYKARLVAKG 980
Query: 889 FNQRKGIDFDEIFSPVVKMTSIRTVLRMAASFNLEIEQMDVKTAFLHSDLEEEIYMEQPE 948
+NQ +G+D+ + +SPV K T+IR VL +A+ N + Q+DV AFLH DL+E++YM+ P
Sbjct: 981 YNQVEGLDYFDTYSPVAKHTTIRLVLALASLNNWHLHQLDVNNAFLHGDLQEDVYMDIPP 1040
Query: 949 GFIKKGKEN 957
G + K N
Sbjct: 1041 G-VSTNKPN 1048
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 241 bits (616), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 203/730 (27%), Positives = 326/730 (44%), Gaps = 86/730 (11%)
Query: 285 EDTINLATQETSWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLE 344
DT ++++ W++DSGA H S F+S V + + + V G++
Sbjct: 371 HDTEGISSKPYYWLLDSGANEHICSNLSFFTSLHRIKPVRVNLPNKTSIIVHFAGNVVFT 430
Query: 345 TENGSRLILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLTKGSMVIANGRKDPKL 404
+ ++ + ++L IG G ++ T S +
Sbjct: 431 PQ----------FYLTNDQTSLKMIGLAKQV-------AGLYRYTPPSDFSSTS------ 467
Query: 405 YVMHA-----KLSLDAFNVANDNSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEK 459
+MH+ S + N N LWH RLGH+S + M + +++ + + +
Sbjct: 468 -LMHSPNKSCNFSSISCNSNNCIPVAALWHFRLGHLSNQRMIKM--SHLYPSIVHNNRDV 524
Query: 460 CSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTMS-YGGNRYFITFIDDHSKKTW 518
C C K + F S S +L+H D+ GP+++S G+RYF+T +DDHS+ W
Sbjct: 525 CDICHFSKQKHLPFSSS-LSHASTNFELLHFDIWGPISISSVHGHRYFLTILDDHSRFLW 583
Query: 519 VYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQTTPP 578
+ LKSK EV K F+ ++ Q K +R+DNG E+ + + F HGI HQ +
Sbjct: 584 IILLKSKSEVSLHVKNFILMIRTQFHVTPKYVRSDNGPEF--LLNDFYSSHGIIHQKSCV 641
Query: 579 KMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPER 638
+ PQ N ER ++ ++ R LL +KL FW A+L AV LINR L +P
Sbjct: 642 ETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAILHAVFLINRVPTHVLHNQSPYH 701
Query: 639 VWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKM 698
V K +++F +SKL + R+ +F+GY GY+ ++
Sbjct: 702 VLFHK---LPDIQLF------------KSKLQPRARKSLFLGYKS---GYKGYHLFD--- 740
Query: 699 IRSRDVVFVENQTIEDVEKTQKEAADRSEDDSTDVXIVLPTTEQRQVGDEENVPQEQEPE 758
+ +R++ FV I S S D P+T E + P
Sbjct: 741 LSTREI-FVSRHVIFHENILPYTFTTSSTTPSWDY--FSPSTT------ETSHSPNNTPS 791
Query: 759 LKNPEVPYQNEPEDDFDGVHVQ--------PPAPEGSQTLRRSNRIRQPSTRYSAN---- 806
+ +P+ H+ P+ N P + Y ++
Sbjct: 792 TPSASLPHTQSSSPSVPVSHLPRHSTRNKISPSYLQDYVCNSINSTTYPISHYLSHNKLS 851
Query: 807 ----EYVL-MTDGGEPECFEEAMENEHKRNXIEAMQDEMKSLHENKTFEXXXXXXXXXXX 861
YVL + EP+ + EA ++E + +AMQ E+++L + T+
Sbjct: 852 SHHSSYVLSLHTHNEPKTYAEANKHECWQ---KAMQVELQALEQTGTWNFVDLPPNVKPI 908
Query: 862 XXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLRMAASFN 921
WVF+IK+ S R+KARLV KG+ Q +G+D+ + FSPV K+T++R ++ +A+ +
Sbjct: 909 GCRWVFKIKRHADGSIERYKARLVAKGYTQVEGLDYFDTFSPVAKLTTVRLIIALASINH 968
Query: 922 LEIEQMDVKTAFLHSDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWYXKFE 981
+ Q+DV AFLH DL+E +YM P G I N VCKL KSLYGLKQA R+WY K
Sbjct: 969 WHLHQLDVNNAFLHGDLQENVYMTLPPG-ISAKHSNTVCKLNKSLYGLKQASRKWYDKLT 1027
Query: 982 SIIGEQGYKK 991
SI+ + Y +
Sbjct: 1028 SILLKHQYTQ 1037
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 231 bits (590), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 163/542 (30%), Positives = 242/542 (44%), Gaps = 90/542 (16%)
Query: 484 VLDLVHSDLCGPL-TMSYGGNRYFITFIDDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQ 542
+ +L+H D+ GP T ++ +YFIT +DD SK TW L K V K F+ +VE Q
Sbjct: 19 IFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSCKSNAFHVLKAFILMVENQ 78
Query: 543 TGKKLKCIRTDNGGEYTGI-FDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCL 601
+K IR+DNG E+T F + GI HQ + P PQ N + ER ++ ++E R L
Sbjct: 79 FSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQNGVVERKHKFILETARAL 138
Query: 602 LSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHI 661
L +KL ++W E
Sbjct: 139 LFQSKLPVKYWSEF---------------------------------------------- 152
Query: 662 PKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKMIRSRDVVFVEN------------ 709
R+K D KT VF+GY GY+ +K+ SRDV+F E
Sbjct: 153 ---HRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRDVIFHETIFPFAMSKDPTH 209
Query: 710 --------QTIEDVEKTQKEAADRSEDDSTDVXIVLP--TTEQRQVGDEEN--VPQEQEP 757
++ D + + S++ +T + P +T + E + +PQ +
Sbjct: 210 FPKFPFHCVSLHDYPTSYDDQDYSSKETTTSPTHITPENSTSPTHITPENSTSIPQLRRS 269
Query: 758 ELKNPEVPY-----QNEPEDDFDGVHVQPPAPEG---SQTLRRSNRIRQPSTRYSANEYV 809
+ + Y N P QPP P + + + + + ++
Sbjct: 270 QRLHKTPTYLTDYVHNVPSSTVSNS--QPPQPHSLPLNALFTLKHYVSPDVFSFDSQSFI 327
Query: 810 L-MTDGGEPECFEEAMENEHKRNXIEAMQDEMKSLHENKTFEXXXXXXXXXXXXXXWVFR 868
+ ++ EP +EEA + + +AM E +LH+N T+ WV++
Sbjct: 328 MNISHDCEPNSYEEASMDPAWQ---KAMTQEFLALHDNNTWTLTNLPKDKKSVGCRWVYK 384
Query: 869 IKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLRMAASFNLEIEQMD 928
+K + S R+KARLVVKG+ Q GID+ E FSPVVKMT++RT++ AA I Q+D
Sbjct: 385 VKHKADGSVERYKARLVVKGYTQHHGIDYTETFSPVVKMTTVRTLIVAAAKKQWNIHQLD 444
Query: 929 VKTAFLHSDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWYXKFESIIGEQG 988
V AFLH DL EE+YM+ P G K+ VCKL KSLYGLKQA RQWY K + +G
Sbjct: 445 VNNAFLHGDLHEEVYMDIPPGLATPHKD-LVCKLNKSLYGLKQASRQWYEKLTEALHTRG 503
Query: 989 YK 990
Y+
Sbjct: 504 YE 505
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H
fold chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 220 bits (560), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 154/475 (32%), Positives = 228/475 (48%), Gaps = 59/475 (12%)
Query: 548 KCIRTDNGGEYTGIFDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKL 607
K IR DNG E+ + F HGI H + + PQ N ER ++ ++ VR LL +KL
Sbjct: 459 KTIRIDNGPEF--MLKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSKL 516
Query: 608 SKRFWGEALLTAVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERS 667
FW A+L AV LINR L +P V K S D +VFGC + ++ R+
Sbjct: 517 PPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHRT 576
Query: 668 KLDVKTRQCVFIGYGQDQFGYRFFYPLQKKMIRSRDVVFVENQTIEDVEKTQKEA-AD-- 724
KL + R+ +F+GY GY F +++ SR V F ++TI K AD
Sbjct: 577 KLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSF--HETILPYHKNPSSTTADWN 634
Query: 725 ---RSEDDSTDVXIVLPTTEQRQVGDEENVPQEQEPELKNPEVPYQNEPEDDFDGVHVQP 781
S+ S D + V + ++P + L + V P D +HV P
Sbjct: 635 YYPSSQSYSHD--------QSPNVNHQVHIPAVIDDILPSTHV-LPPSPPYDSPPIHVSP 685
Query: 782 PAPEGSQTLRRSNRIRQP-------------STRYSANEYV--------------LMTDG 814
RRSNR+R ST Y + Y+ +
Sbjct: 686 ---------RRSNRVRTAPLHLQDYVCNSVHSTTYPLSHYINYNNISTNHASFISSLQTT 736
Query: 815 GEPECFEEAMENEHKRNXIEAMQDEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEH 874
EP + EA +++ +AMQ E+ +L + T++ W++++K
Sbjct: 737 PEPTTYVEASKHDCWN---KAMQAELLALEKTGTWDIVDLPAYVKPIGCRWIYKVKHNAD 793
Query: 875 SSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLRMAASFNLEIEQMDVKTAFL 934
S R+KARLV KG+ Q +G+D+ E +SPV K+T++R V+ +A+ N + Q+DV AFL
Sbjct: 794 GSIERYKARLVAKGYTQIEGLDYFETYSPVAKLTTVRLVIALASIHNWHLHQLDVNNAFL 853
Query: 935 HSDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWYXKFESIIGEQGY 989
H +L+E++YM P G I K + VCKL+KSLYGLKQA RQWY K S++ +Q Y
Sbjct: 854 HGELQEDVYMILPPG-INIAKPHQVCKLKKSLYGLKQASRQWYEKLTSVLIQQHY 907
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 196 bits (499), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 210/843 (24%), Positives = 350/843 (41%), Gaps = 123/843 (14%)
Query: 11 LNGANYHIWRNKMRDLLMVTKMHLPVFGSSKPEDKTD---EEWAFEHEQVCGYIXQFVDD 67
L+ +NYH W MR L V GS D + W + V +I V+D
Sbjct: 47 LSHSNYHSWARSMRRALGAKNKFDFVDGSIPVPTDFDPNFKAWNRCNMLVHSWIMNSVED 106
Query: 68 NVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQKGTSVADHLSEMQVTI 127
++ I +A L L + ++ +T +MN K+Q E+ +I
Sbjct: 107 SIAQSIVFLKNAIDLEAYLPTPVCACP--HRCMCITGVMNAKHQH---------EITRSI 155
Query: 128 HQLSNMGIKFDDKILGLMVFASLPESWETLKISITNSTPHSGVSLEFVKNAVLNEEMRRK 187
L+ + FD +++ LP ++ + + V+ E + K
Sbjct: 156 RFLTGLNDSFDLVRSQILLMNPLP-------------------TINKIFSMVMQHERQFK 196
Query: 188 TQNPSSSQSDILLADAKRNNHPRGRSQSRSSNTRDKSRGRSNKFANIVCHHCGKKGHIKR 247
P S IL+ A G+SQ R + G SN C CG+ GH
Sbjct: 197 ISIPVD-DSTILVNSA-------GKSQGRG-----RGNGNSNSNGKRSCSFCGRDGHTID 243
Query: 248 YC-----RKFKSDQEKIKGKAKKEES-----SDDDEANVIDEFQLFIEDTINLA------ 291
C R+ D + KG + E S ++ + + Q +NL+
Sbjct: 244 ICYRKHEREDLDDSKSCKGNSNTEPSFGITKEQYEQLVTLLQSQQASSSKVNLSHVTNHV 303
Query: 292 -------------TQETSWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGK 338
+ +W++DSGA+ H S +NF SY +K+ + +
Sbjct: 304 TSGITRISYTMNHSSFGTWIVDSGASDHICSSIKNFDSYAPIIPVHIKLPNGNMAIAKFS 363
Query: 339 GDICLETENGSRLILKDVVHVPDMHSNLISIGRLDDENFC-STFRKGQWKLTKGSMVIAN 397
G + LI ++V++V + NL+S+ +L +N C TF + + S +
Sbjct: 364 GTVTFSPG----LIARNVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMT 419
Query: 398 GRKDPKLYVMHAKLSLDAFNVANDNSAV---------------ELWHKRLGHMSEKGMTT 442
G + + L F+ N + LWH RLGH+S +
Sbjct: 420 GLGELIEGLYFLNLGSQVFSQFNHQPVIASSQASSSTTFLPQEALWHFRLGHLSNDRLLR 479
Query: 443 LVKNNMLSGLDKVHLEKCSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPL-TMSYG 501
+ ++ +D + C C +H ++ FK+S ++ + +L+H D+ GP+ T S
Sbjct: 480 MQQHFPCIKVDSNSV--CDICHYSRHKKLPFKLS-MNKASHCYELIHFDIWGPISTHSIH 536
Query: 502 GNRYFITFIDDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGI 561
G++YFIT +DD+S+ TW+ K+K EV + F+ +E Q K+K +RTDNG E+ +
Sbjct: 537 GHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEF--L 594
Query: 562 FDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVH 621
F GI+HQT+ + PQ N ER ++ ++ R LL +KL K FW ++L A++
Sbjct: 595 MPDFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKVFWSYSVLHAIY 654
Query: 622 LINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGY 681
+INR LQ +P + G D ++ +VFGC ++ + R+K D + ++CVF+GY
Sbjct: 655 IINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGY 714
Query: 682 GQDQFGYRFFYPLQKKMIRSRDVVFVENQTIEDVEKTQKEAADRSEDDSTDVXIVLPTTE 741
Q G + K + SR+V + E+ K + S ++P TE
Sbjct: 715 KQGIKGAILYDLNHKTIFASRNVTYHEHILPYSNSKQYFQWQYHSNHP------IIPVTE 768
Query: 742 QRQVGDEENVPQEQEPELKNPEVPYQNEPEDDFD-GVHVQPPA-----PEGSQTLRRSNR 795
Q E +P E + E EP D H+Q P P+ T R+S R
Sbjct: 769 QTSSNFE--LPLENQSETN-------KEPAMHIDNNTHIQDPTQIEHEPQQLNT-RKSTR 818
Query: 796 IRQ 798
+ Q
Sbjct: 819 VSQ 821
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 147/532 (27%), Positives = 247/532 (46%), Gaps = 60/532 (11%)
Query: 296 SWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKD 355
+W++DSGA+ H S + F SY +K+ + + G + LI ++
Sbjct: 391 TWIVDSGASDHICSSIKFFDSYAPIIPVHIKLPNGNMAIAKFSGTVNFSPG----LIARN 446
Query: 356 VVHVPDMHSNLISIGRLDDENFC-STFR---------------------KGQWKLTKGSM 393
V++V + NL+S+ +L +N C TF +G + L GS
Sbjct: 447 VLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGLYFLNLGSQ 506
Query: 394 VIANGRKDPKLYVMHAKLSLDAFNVANDNSAVELWHKRLGHMSEKGMTTLVKNNMLSGLD 453
V + P + + + S LWH RLGH+S + + ++ +D
Sbjct: 507 VFSQFNHQPVIALSQSSSSTTFL------PQEALWHFRLGHLSNDRLLRMQQHFPCIKVD 560
Query: 454 KVHLEKCSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPL-TMSYGGNRYFITFIDD 512
+ C C +H ++ FK+S ++ + +L+H D+ GP+ T S G++YFIT +DD
Sbjct: 561 SNSV--CDICHYSRHKKLPFKLS-MNKASHCYELIHFDIWGPISTHSIHGHKYFITALDD 617
Query: 513 HSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQ 572
+S+ TW+ K+K EV + F+ +E Q K+K +RTDNG E+ + F GI+
Sbjct: 618 YSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEF--LMPDFYSSKGIE 675
Query: 573 HQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQ 632
HQT+ + PQ N ER ++ ++ R LL +KL K FW ++L A+++INR LQ
Sbjct: 676 HQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAIYIINRIPTPLLQ 735
Query: 633 YDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFY 692
+P + G D ++ +VFGC ++ + R+K D + ++CVF+GY Q G +
Sbjct: 736 NKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILYD 795
Query: 693 PLQKKMIRSRDVVFVENQTIEDVEKTQKEAADRSEDDSTDVXIVLPTTEQRQVGDEENVP 752
K + SR+V + E+ I + + + + ++P TEQ E +P
Sbjct: 796 LNHKTIFASRNVTYHEH--ILPYSNSNQYFQWQYHSNHP----IIPATEQTSSNSE--LP 847
Query: 753 QEQEPELKNPEVPYQNEPEDDFD-GVHVQPPA-----PEGSQTLRRSNRIRQ 798
E + E EP D H+Q P P+ T R+S R+ Q
Sbjct: 848 LENQSETN-------KEPAMHIDNNTHIQDPTQIEHEPQQLNT-RKSTRVSQ 891
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 178 bits (451), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 187/766 (24%), Positives = 313/766 (40%), Gaps = 110/766 (14%)
Query: 11 LNGANYHIWRNKMRDLLMVTKMHLPVFGSSKPEDKTD---EEWAFEHEQVCGYIXQFVDD 67
L G NYH W KMR L + + V GS D+ D W + V +I +
Sbjct: 36 LTGENYHSWSMKMRRALAMKNKYKFVDGSIPIPDEDDLNRPAWERCNNLVHTWIINSISP 95
Query: 68 NVYNHICNETHARTLWDKL----------------EELYASKSGNNQLF-YLTKLMNF-- 108
++ + + HA +W+ L +E+ K G++++ Y T+L
Sbjct: 96 SIAHSVVFIEHAIDMWNDLKDRFMRGDRIRVAQLHQEIANLKQGDHKITDYFTELRGLWE 155
Query: 109 KYQKGTSVADHLSEMQVTIHQLSNM-GIKFDDKILGLMVFASLPESWETLKISITNSTPH 167
+ + + M T + N G + +D+++ ++ L E ++ + + P
Sbjct: 156 ELDQYRPMPQCTCPMPCTCLAMRNAKGFRAEDRVIQFLI--GLNEEYQGVASQVLLMDPM 213
Query: 168 SGVSLEFVKNAVLNEEMRRKTQNPSSSQSDIL-----LADAKRNNHPRGRSQSRSSNTRD 222
++ F + V+ +E + + S Q+ L L +A GR + +S
Sbjct: 214 PPINRVF--SLVMQQERKLQYAVVSHVQNTSLEDNTGLVNAVNGQKQFGRGRGGTSYQGR 271
Query: 223 KSRGRSNKFANIVCHHCGKKGHIKRYCRKFKS-----------------DQEKIKGKAKK 265
C C + H C K D E + K
Sbjct: 272 GRGNGRGNGNGRFCTFCERTNHTVETCYKKHGYPPNWGRGGGNSYTNMVDAEDTESKINM 331
Query: 266 EESSDDDE----------------------------ANVI---DEFQLFIEDTINLAT-- 292
+S +DE ANV+ + LF ++ LA+
Sbjct: 332 GSTSRNDENAGITLTKDQYQNLMSLLEKNNLETKCSANVVKGSNSISLFESKSL-LASFD 390
Query: 293 ---QETSWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGS 349
+ W++D+GAT H F+SY+ V + + +++ G + L +
Sbjct: 391 SKQNDPGWIVDTGATHHTCYDLNWFTSYSKIETINVNLPNGSVIEACYIGQVKLSKD--- 447
Query: 350 RLILKDVVHVPDMHSNLISIGRLDDENFCST-FRKGQWKLTKGSMV--IANGRKDPKLYV 406
L + +V+++P NLIS+ +L E C F + + + + I ++ LY
Sbjct: 448 -LSIDNVLYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRKIGLAKEKHGLYY 506
Query: 407 MHAKLSLDAFNVANDNSAVEL----------WHKRLGHMSEKGMTTLVKNNMLSGLDKVH 456
+ + +V+N ++ VEL WH RLGH+S M + N M S +
Sbjct: 507 LETD-ERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLSHDRMICM--NKMYSYVPVSP 563
Query: 457 LEKCSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPL-TMSYGGNRYFITFIDDHSK 515
C C + + F IS K DLVH D+ GP T S G++YF+T +DD ++
Sbjct: 564 HTACDVCQMCRQKILPFPIS-SRNAKTAFDLVHFDIWGPFSTTSVHGHKYFLTILDDCTR 622
Query: 516 KTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQT 575
W+ LK+K E K F+++VERQ +K+K IR+DNG E+ + F + GI HQ
Sbjct: 623 HVWIVMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEF--MLREFYDKKGIIHQR 680
Query: 576 TPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDT 635
+ PQ N ER ++ ++ R L+ +KL K FW A+L AV+LINR L +
Sbjct: 681 SCVYTPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTKILNNKS 740
Query: 636 PERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGY 681
V + L+VFGC ++ R K D K R+C F+G+
Sbjct: 741 SYEVLYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGF 786
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 170 bits (431), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 125/426 (29%), Positives = 198/426 (46%), Gaps = 44/426 (10%)
Query: 296 SWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKD 355
SW+IDSGA H + +F+S+ +V + + + V G++ L L
Sbjct: 350 SWIIDSGANDHVCFSKTHFTSFYKIKPVLVTLPNGTSIYVHYAGNVHFT----PYLHLTH 405
Query: 356 VVHVPDMHSNLISIGRLDDENFCST-FRKGQWKL--TKGSMVIANGRKDPKLY--VMH-- 408
V++ P+ NLIS+ ++ D CS F + + +I G K LY MH
Sbjct: 406 VLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFV 465
Query: 409 --------------AKLSLDAFNVANDNSAV-------------ELWHKRLGHMSEKGMT 441
K++ A N++ + + LWH RLGH+S + ++
Sbjct: 466 NQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLS 525
Query: 442 TLVKNNMLSGLDKVHLEKCSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTMSY- 500
T+ + + + + C C +H ++ F S S + L+H D+ GPL ++Y
Sbjct: 526 TMSR--LYPSIIVDNKAACDICHFARHKKLPFPHS-SSHANSKFQLLHFDIWGPLAINYV 582
Query: 501 GGNRYFITFIDDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG 560
G++YF+T +DDH++ W+ LKSK EV K F+ L+E Q K IRTDNG E+
Sbjct: 583 HGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEF-- 640
Query: 561 IFDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAV 620
+ F GI HQ + + PQ N ER ++ ++ R LL +KL FW A L AV
Sbjct: 641 LLHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 621 HLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIG 680
LINR + LQ +P ++ +VFGC + + R+KL+ + R+ VF+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 681 YGQDQF 686
Y F
Sbjct: 761 YKNFYF 766
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 154 bits (389), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 200/849 (23%), Positives = 331/849 (38%), Gaps = 138/849 (16%)
Query: 2 EARTSKMIS--LNGANYHIW-RNKMRDLLMVTKMHLPVFGSSKPEDKTD---EEWAFEHE 55
E S +IS L+G+NY W R+ +R K+ + GS + D+ D W +
Sbjct: 19 EGPNSVLISPPLDGSNYLAWSRSMIRAFGAKNKLKF-IDGSMEIPDEDDLNRNAWERCNH 77
Query: 56 QVCGYIXQFVDDNVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQKGTS 115
V +I V + + +A W L+E + SK+ ++ L +N Q S
Sbjct: 78 LVQSWIINSVSPQIAQTLVFHENAIDAWSDLKERF-SKADIIRIASLRSKINNMKQGFKS 136
Query: 116 VADHLSEMQVTIHQLSNM---------------------GIKFDDKILGLMVFASLPESW 154
V ++ +EM+ +L++ + +D+++ + L + +
Sbjct: 137 VLEYFTEMKTLWEELNSHRPMPHCTCPHPCRCAAMREARCYRLEDQVIQFL--TGLNDQF 194
Query: 155 ETLKISITNSTPHSGVSLEFVKNAVLNEEMRRKTQNPSSSQSDILLADAKRNNHPRGRSQ 214
+K + P S+ V + V+ EE + SS + +A + P+GR +
Sbjct: 195 NVVKTQVLMLDPLP--SINKVYSLVVQEESNNLSLT-SSINEPFSVVNATNSRKPQGRGR 251
Query: 215 SRSSNTRDKSRGRSNKFANIVCHHCGKKGHIKRYCRKFKSDQEKIKGKAKKEESSDDDE- 273
SS R + C CGK H YC + + + SS +DE
Sbjct: 252 GYSSGFRPPRQ----------CTFCGKTNHTVEYCYQKHGHPNFPEQHSSVNASSSNDEV 301
Query: 274 ----------------------------------------------------ANVIDEFQ 281
++V D Q
Sbjct: 302 EVQPGSCNTSSSTSSNISQEKYDQLLSLLQQVNLLPAASTPSSSASANHIHTSSVPDSTQ 361
Query: 282 LFIEDTINLATQETS--WVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKG 339
I + + S W +DSGA H + F+S+ N V + + + V G
Sbjct: 362 SGISSIFSCSINSKSDVWFLDSGANEHIVNNTHWFTSFHKINPRPVNLPNGSSVLVEYAG 421
Query: 340 DICLETENGSRLILKDVVHVPDMHSNLISIGRLDDENFC-STFRKGQWKL--TKGSMVIA 396
I + L++V++ P NLISI ++ C + F Q L +I
Sbjct: 422 TIRFTPQ----FYLENVLYSPSFTLNLISIFKVCSSLNCYAIFHNKQCLLQDLHSQKMIG 477
Query: 397 NGRKDPKLYVMHAKLSLDAFNVANDNSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVH 456
G + F V SA LWH RLGH+S K + + + +D VH
Sbjct: 478 LGEQ---------------FGVYYSYSA--LWHFRLGHVSPKRLIHMSQLYPTLTVD-VH 519
Query: 457 LEKCSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTM-SYGGNRYFITFIDDHSK 515
C C K ++ F S S +L+H D+ GPL++ S +RYF+T +DD+S+
Sbjct: 520 -ATCDICHFAKQKKLPFSNS-ISVASIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSR 577
Query: 516 KTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQT 575
W+ LKSK EV K F+NL++ Q K +R+DNG E+ + +F GI H
Sbjct: 578 YVWIVLLKSKSEVSQHVKNFINLIQTQYNITPKTVRSDNGPEF--LLHSFYASKGIVHHR 635
Query: 576 TPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDT 635
+ + PQ N ER ++ ++ R LL +KL +W ALL A +INR L +
Sbjct: 636 SCVETPQQNGRVERKHQHILNVGRALLYQSKLPVSYWSYALLHATFIINRVTSPTLHNKS 695
Query: 636 PERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQ 695
P ++ + +VFG + R+KL + R+ VF+GY GY
Sbjct: 696 PYQLLHDTIPAEHIFKVFGSLCYSTTLHSHRTKLSARARKSVFLGYTVGFKGYVLLDIHT 755
Query: 696 KKMIRSRDVVFVEN--------QTIEDVEKTQKEAADRSEDDSTDVXIVLPTTEQRQVGD 747
+++ SR V F E+ +I + S + ++D I LP++ + D
Sbjct: 756 REIHISRHVQFYEHILPYPATSSSITTAWEYFSSDTCSSSNPNSDTPITLPSSPPPFI-D 814
Query: 748 EENVPQEQE 756
+ P + E
Sbjct: 815 VDIPPTDHE 823
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 121/433 (27%), Positives = 193/433 (44%), Gaps = 58/433 (13%)
Query: 283 FIEDTINLATQETSWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDIC 342
I T + + W++DSGA H F+SY + +V + D ++ V G I
Sbjct: 348 IINSTTCSSLSNSYWLVDSGANEHICRDLNLFTSYHAISPSIVTLPDGSIVTVTHAGYIN 407
Query: 343 LETENGSRLILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLTKGSMVIANGRKDP 402
+ L +V++ NL+S+ ++ + C TF+ P
Sbjct: 408 FSPQ----FYLTNVLYSSSFRLNLMSVHKVCESLSC-TFQFL-----------------P 445
Query: 403 KLYVMHAKLSLDAFNVANDNSAVELWHKRLGHMSEKGMTTLVKNNMLSGL--DKVHLEK- 459
++ SL +AN + +LGH+S + M NM+S L + V K
Sbjct: 446 NQCIIQDSTSLKMIGLANQQDGL----YKLGHLSHQRM------NMMSSLYSNIVSDNKN 495
Query: 460 --CSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTMS-YGGNRYFITFIDDHSKK 516
C C K + F IS S + +L+H D+ GPL++S G++YF+T +DDHS+
Sbjct: 496 SVCDICHFAKQKHLPFSIS-TSHATSNFELLHLDIWGPLSISSIHGHKYFLTIVDDHSRF 554
Query: 517 TWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQTT 576
W+ +LK+K V K F+ +V+ Q KCIR+DNG E+ + +F + GI HQ +
Sbjct: 555 LWIISLKTKSGVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEF--LILSFYESLGILHQKS 612
Query: 577 PPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTP 636
+ PQ N ER + ++ R LL +KL +W ALL AV LINR P
Sbjct: 613 CVETPQQNGRVERKHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRK---------P 663
Query: 637 ERVWSGKDVSYD-HLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQ 695
+ G+ Y H + F +++ + R+ VF+GY G+
Sbjct: 664 TPLLEGQSPYYALHHKFPDIDTF-------KNQASTRARKTVFLGYKSGYKGFILLDIHS 716
Query: 696 KKMIRSRDVVFVE 708
+++ SR VVF E
Sbjct: 717 REIFVSRHVVFHE 729
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 111/176 (63%), Gaps = 4/176 (2%)
Query: 816 EPECFEEAMENEHKRNXIEAMQDEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHS 875
EP+ + EA + + ++ AMQ E+++L + T++ W++++K
Sbjct: 892 EPKSYAEASKLDCWKH---AMQVELQALEKTGTWKLVDLPPNVKPIGCRWIYKVKFHADG 948
Query: 876 SQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLRMAASFNLEIEQMDVKTAFLH 935
+ R+KARLV KG+NQ +G+D+ + +SPV K+T++R V+ +++ N + Q+DV AFLH
Sbjct: 949 TVERYKARLVAKGYNQIEGLDYLDTYSPVAKLTTVRLVIALSSINNWHLHQLDVNNAFLH 1008
Query: 936 SDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWYXKFESIIGEQGYKK 991
DL+E++YM P G IK K N VCKL KSLYGLKQA R+WY K S++ +Q Y +
Sbjct: 1009 GDLQEDVYMMVPPG-IKSSKLNQVCKLTKSLYGLKQASRKWYEKLTSVLFDQHYTQ 1063
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 114/436 (26%), Positives = 179/436 (41%), Gaps = 67/436 (15%)
Query: 297 WVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKDV 356
W+IDSGA H FSS+ V + + ++ V G + S+ L V
Sbjct: 387 WLIDSGANEHICCDITFFSSFYRIKPVNVSLPNGTIVLVHYAGTVSF----NSKFYLNHV 442
Query: 357 VHVPDMHSNLISIGRLDDENFCS---TFRKGQWKLTKGSMVIANGRKDPKLYVMHAKLS- 412
++ P+ NLIS+ +L + C + K + + +I ++ LY + S
Sbjct: 443 LYSPNFLLNLISVAKLCESLTCFFHFSLDKCLIQDQQSLKMIGLAKQMDGLYKFYPSSSS 502
Query: 413 --LDAF-------NVANDNSAVE---------LWHKRLGHMSEKGMTTLVKNNMLSGLDK 454
L+ F NV +S + LWH RLGH+S++ + TL ++L K
Sbjct: 503 CNLELFSSPTKYCNVVLPSSCNKIPTFVPSDTLWHFRLGHLSKQRLQTL---SLLYPSIK 559
Query: 455 VHLEK-CSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTMSYGGNRYFITFIDDH 513
+ + C C KH + F +DH
Sbjct: 560 IDNKAICDLCHFAKHKHLPFTS-----------------------------------NDH 584
Query: 514 SKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQH 573
S+ W+ LK+K EV K F+ +++ K IRTDNG E+ + HGI H
Sbjct: 585 SRFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEF--MLSTLYSSHGIIH 642
Query: 574 QTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQY 633
Q + + PQ N ER ++ ++ R LL +KL +W A+ AV LINR L
Sbjct: 643 QKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAVFLINRVPTPTLNN 702
Query: 634 DTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYP 693
+P V K +VFGC + + +KL + R+ +FIGY G+ +
Sbjct: 703 QSPYFVLHHKLPDSSLFKVFGCLCYASTLQSHTTKLKHRARKSIFIGYQSGYKGFTLYDL 762
Query: 694 LQKKMIRSRDVVFVEN 709
+++ SR V F EN
Sbjct: 763 HSREIFISRHVTFHEN 778
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 126/250 (50%), Gaps = 4/250 (1%)
Query: 460 CSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTM-SYGGNRYFITFIDDHSKKTW 518
C C +H ++ F S S + L+H D+ GPL + S G++YF+T +DDH++ W
Sbjct: 16 CDVCHFARHKKLPFSHS-SSHASSKFQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLW 74
Query: 519 VYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQTTPP 578
+ LK+K EV K F+ ++E Q K IRTDNG E+ + F GI HQ++
Sbjct: 75 IILLKTKAEVPMHIKNFIVMIENQFHVTPKIIRTDNGSEF--LLHEFYASKGILHQSSCV 132
Query: 579 KMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPER 638
+ PQ N ER ++ ++ R LL +KL FW A L AV LINR L +P
Sbjct: 133 ETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYH 192
Query: 639 VWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKM 698
+ +VFGC + + +KL+ + R+ VF+GY GY + +++
Sbjct: 193 LLYDSPPDITTFKVFGCLCYASSLQSHITKLETRARKSVFLGYKLGFKGYVLYDLHTREI 252
Query: 699 IRSRDVVFVE 708
SR VVF E
Sbjct: 253 FISRHVVFHE 262
>IMGA|Medtr8g044870.1 Reverse transcriptase, identical
chr08_pseudomolecule_IMGAG_V3 10146606-10147487 H
EGN_Mt090430 20090702
Length = 293
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 61/156 (39%), Positives = 96/156 (61%), Gaps = 1/156 (0%)
Query: 836 MQDEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGI 895
MQ E+ +L + T++ W+F+IK S R+KARLV KG+NQ +G+
Sbjct: 1 MQSEITALEQTGTWKIVDLPPAVKPIGCRWIFKIKHNVDGSIERYKARLVAKGYNQIEGL 60
Query: 896 DFDEIFSPVVKMTSIRTVLRMAASFNLEIEQMDVKTAFLHSDLEEEIYMEQPEGFIKKGK 955
D+ + +SPV K+T++R ++ +A+ + + Q DV AFLH +L+E++YM P G +
Sbjct: 61 DYFDTYSPVAKLTTVRFIIALASINHWHLHQFDVNNAFLHGELQEDVYMIIPPG-VPHSH 119
Query: 956 ENYVCKLRKSLYGLKQAPRQWYXKFESIIGEQGYKK 991
++ VCKL KSLYGL+QA +WY K +I+ GYK+
Sbjct: 120 QDEVCKLNKSLYGLQQASMKWYEKLTNILISTGYKQ 155
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 128 bits (322), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 86/124 (69%), Gaps = 2/124 (1%)
Query: 460 CSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTM-SYGGNRYFITFIDDHSKKTW 518
C+ C+ GKH+R AFK R K+VL++VHSD+ GP+ + +Y GNRYFITF+D++SK W
Sbjct: 15 CNICLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYSKMLW 74
Query: 519 VYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGI-FDAFCKEHGIQHQTTP 577
+Y +K K + L+VFK+F L E+Q+G KLK + T GGEYT F+++C GI H+ T
Sbjct: 75 LYLIKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGIIHEVTT 134
Query: 578 PKMP 581
P P
Sbjct: 135 PYTP 138
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 127 bits (319), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 106/398 (26%), Positives = 172/398 (43%), Gaps = 31/398 (7%)
Query: 538 LVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMER 597
++E Q K IRTDNG E+ + F GI HQ + + PQ N ER ++ ++
Sbjct: 1 MIENQFHVTPKIIRTDNGSEF--LLHEFYASKGILHQRSCVETPQQNGRVERKHQHILNI 58
Query: 598 VRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKA 657
R LL +KL FW A L AV LINR L +P + +VFGC
Sbjct: 59 GRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCLC 118
Query: 658 FVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKMIRSRDVVFVENQTIEDVEK 717
+ + R+KL+ + R+ VF+GY GY + +++ SR VVF E +
Sbjct: 119 YASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHEC-VLPYKSI 177
Query: 718 TQKEAADRSEDDSTDVXIVLPTTEQRQVGDEENVPQE----------------QEPELKN 761
+ ++ D S +++P+ V D + P +P
Sbjct: 178 SSSQSLDWEYFTSISSLLIIPS-----VSDISHSPSTTKYVPHTQPTTTTTPTNDPSRPP 232
Query: 762 P-EVPYQNEPEDDFDGVHVQPPAPEGS--QTLRRSNRIRQPSTRYSANEYVL-MTDGGEP 817
P +N+ + ++ P S SN + + + ++L + EP
Sbjct: 233 PIRCSSRNKISPSYLKDYICPHKSSTSVNNLYSISNYVSYHNISNPHSHFILSLHAHNEP 292
Query: 818 ECFEEAMENEHKRNXIEAMQDEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQ 877
+ + EA + E R +AMQ E+ +L T++ W+++IK +
Sbjct: 293 KTYTEANKFECWR---QAMQVELTALENTGTWKIIDSPPNAKPIGCRWIYKIKHNADDTI 349
Query: 878 PRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLR 915
R+KARLV KG+NQ +G+D+ + +SPV K T+IR R
Sbjct: 350 ERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIRLASR 387
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 123 bits (308), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 107/408 (26%), Positives = 172/408 (42%), Gaps = 53/408 (12%)
Query: 297 WVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKDV 356
W+IDSGA H S F SY V + + + V G + + V
Sbjct: 389 WLIDSGANEHICSSLHLFHSYYRIKPICVNLPNGSSVIVQYAGTVVF----SPHFHITHV 444
Query: 357 VHVPDMHSNLISIGRL-DDENFCSTFRKGQWKL--TKGSMVIANGRKDPKLYVMH--AKL 411
++ P LIS+ ++ + F + + K +I G LY +H A
Sbjct: 445 LYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKTQKMIGLGNLCDGLYRLHPFAPA 504
Query: 412 SLDAFNVANDNSAVE--------------------LWHKRLGHMSEKGMTTLVKNNMLSG 451
S A +++ S +WH RLGH+S + ++ +
Sbjct: 505 SPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWHFRLGHLSNQRLSMM-------- 556
Query: 452 LDKVHLEKCSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTM-SYGGNRYFITFI 510
H S + K +A + +L+H D+ GPL++ S G++YF+T +
Sbjct: 557 ----HSLYSSITIDNKAYSIA---------SSKFELLHFDIWGPLSVTSVHGHKYFLTIV 603
Query: 511 DDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHG 570
DD S+ WV LK+K EV + K F+ L+ K IR+DNG E+ + F G
Sbjct: 604 DDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGPEF--LIPEFYASKG 661
Query: 571 IQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVP 630
I HQ + + PQ N ER ++ ++ R LL +KL FW A++ AV LIN+
Sbjct: 662 IIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAVIHAVFLINKVPTPL 721
Query: 631 LQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVF 678
+ +P ++ + +VFGC F +RSKL + R+ +F
Sbjct: 722 FKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQRSKLQSRARKSIF 769
>IMGA|Medtr6g077130.1 Zinc finger, CCHC-type
chr06_pseudomolecule_IMGAG_V3 15158354-15162093 E
EGN_Mt090430 20090702
Length = 532
Score = 115 bits (288), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 186/414 (44%), Gaps = 38/414 (9%)
Query: 5 TSKMISLNGANYHIWRNKMRDLLMVTKMHLPVFGSSKP-EDKTD----EEWAFEHEQVCG 59
S++ G N+ W ++ LL V + V KP E K+D E+W +VC
Sbjct: 38 VSRIEVFKGQNFRRWNERVFTLLDVHGV-ASVLTDVKPDEAKSDAKQIEKWN-NANKVCR 95
Query: 60 Y-IXQFVDDNVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQKGTSVAD 118
+ I + D +++ C+ A+ +WD + Y ++ Q F +
Sbjct: 96 HTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVI---------------- 139
Query: 119 HLSEMQVTIHQLSNMGIKFDDKILGLMVFASLPESWETLKISITNSTPHSGVSLEFVKNA 178
+E I +L I D + + LP SW+ K + + H +SL +
Sbjct: 140 --NEYHQLIEELKAENIILPDVFVAAALVEKLPSSWDDYKQQLKHK--HKQMSLNDLIRH 195
Query: 179 VLNEEMRRKTQNPSSSQSDILLADAKRNNHPRGRSQSRSSNTRDKSRGRSNKF--ANI-V 235
++ E+ RK + +++ A+ +NN R Q R N D + +N AN+
Sbjct: 196 IIIEDTSRKECGAARAKALESRANLIQNN---ARKQQRYENKSDHALKVTNPNFKANLGE 252
Query: 236 CHHCGKKGHIKRYCRKFKSDQEKIKGKAKKEESSDDDEANVIDEFQLFIEDTINLATQET 295
C+ CGKKGH +CR K + + K KA + D + D+ + ++L
Sbjct: 253 CYVCGKKGHKAYHCRYRKVNGQPPKPKANLTQGDD--KKYDDDDVIAAVISKVHLVNDVQ 310
Query: 296 SWVIDSGATLHATSRRENFSSY--TLDNLGVVKIADDKLLKVVGKGDICLETENGSRLIL 353
WV+DSGAT H ++RE F+SY D+ V + D + V GKG + L+ +G L L
Sbjct: 311 KWVVDSGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSGKTLAL 370
Query: 354 KDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLTKGSMVIANGRKDPKLYVM 407
DV++VP + +NLIS+ L+ +F + ++K ++ + NG D L+V+
Sbjct: 371 SDVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVL 424
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 133/574 (23%), Positives = 222/574 (38%), Gaps = 88/574 (15%)
Query: 171 SLEFVKNAVLNEEMRRKTQNPSSSQSDI-LLADAKRNNHPRGRSQSRSSNTRDKSRGRSN 229
S+ + + V+ EE SSS D +L +A P GR + S + K+ +
Sbjct: 167 SINKIYSLVIQEESNNSVVTASSSIEDSNILVNASDARKPFGRGKLNSGSHPPKNNSK-- 224
Query: 230 KFANIVCHHCGKKGHIKRYCRKFKSDQEKIKGKAK-----KEESSDDDEANVIDEFQLFI 284
C C K H +C + KG E + ++ I + L
Sbjct: 225 -----YCSFCHKTNHTLEFCYQKHGFPNANKGSGSTNAVNSEGVPESQGSSAISQIGLTQ 279
Query: 285 EDTINLAT--QETSWVID-----SGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVG 337
E ++L + Q++S +I S T H S T+ + ++ L+
Sbjct: 280 EQYVHLVSLLQQSSLIIPAPPITSANTNHIISEPSYAGINTIFPCCLHVKSNYWLIDSGA 339
Query: 338 KGDICLETENGSRLILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLTKGSMV--- 394
IC + +HV + + + +F F + G +
Sbjct: 340 NEHICSSLSLLHSFYIIKPLHVTLPNGTSVLVHYAGTVSFSPHFHITNKMIGLGDLCDGL 399
Query: 395 ----IANGRKDPKLYVMH---AKLSLDAFNVANDNSAVE-----LWHKRLGHMSEKGMTT 442
I +V + K+S ++ N + N+ V LWH RLGH+S + ++
Sbjct: 400 CRLRIPASSNFSHCFVNNFQCNKVSYESCNSVSCNNNVHIPSTALWHFRLGHLSNQRLS- 458
Query: 443 LVKNNMLSGLDKVHLEK---CSDCMAGKHNRVAFKISXPSRMKNVLDLVHSDLCGPLT-M 498
M +H++ C C K ++ + S S + +L++ D+ GPL +
Sbjct: 459 ----QMHHLYPDIHVDNKFICDICHFAKQRKLPYNSS-TSIASSNFELLYLDIWGPLAKV 513
Query: 499 SYGGNRYFITFIDDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEY 558
S G RYF+T +DDHS+ W K+K EV + F+ L++ + K IR+DNG +
Sbjct: 514 SIHGQRYFLTIVDDHSRFLWTILFKNKSEVPSHIQHFIYLIQNKHKVTPKIIRSDNGHVF 573
Query: 559 TGIFDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLT 618
+ AF GI HQ + + PQ N
Sbjct: 574 --LLSAFYASQGIIHQRSCVETPQHN---------------------------------- 597
Query: 619 AVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVF 678
V LINR + L+ +P +V + +VFGC + + R+KL + R+ VF
Sbjct: 598 -VFLINRVPTLVLENKSPYQVLYKTLPDINSFKVFGCLCYASTLQSHRTKLQSRARKSVF 656
Query: 679 IGYGQDQFGYR--FFYPLQ-KKMIRSRDVVFVEN 709
+GY GY+ F Y L K++ SR+V F E+
Sbjct: 657 LGYKS---GYKGSFLYDLNTKEIFMSRNVTFHES 687
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 103 bits (256), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 92/188 (48%), Gaps = 40/188 (21%)
Query: 522 LKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYT-GIFDAFCKEHGIQHQTTPPKM 580
+K + + FKQ L+E Q GKK+K ++ DNG E+ F+ FCK GI
Sbjct: 1 MKHRSDASKNFKQLNALLENQFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNT 60
Query: 581 PQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPERVW 640
PQ NS+A+RMN+TL+ER RC+LS+A L++ FWGE
Sbjct: 61 PQQNSVAKRMNQTLLERARCMLSNAGLTRTFWGET------------------------- 95
Query: 641 SGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKMIR 700
FGC + + KL+ + ++ VF+GYG YR + P + ++I
Sbjct: 96 -----------GFGCTVYYRV---NEGKLESRAKKRVFVGYGDGVKEYRIWSPSENRVIL 141
Query: 701 SRDVVFVE 708
SR+VVF E
Sbjct: 142 SRNVVFDE 149
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 100 bits (249), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
Query: 494 GPLTM-SYGGNRYFITFIDDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRT 552
GPL++ S G+RYF+T +DDH++ WV LK+K EV K F+ +++ K IRT
Sbjct: 523 GPLSVASVHGHRYFLTILDDHTRFLWVILLKTKAEVSSHVKNFITMIQNHFHTTPKFIRT 582
Query: 553 DNGGEYTGIFDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHAKLSKRFW 612
DNG E+ + +F HGI HQ + + PQ N ER ++ ++ R LL +KL FW
Sbjct: 583 DNGPEF--MLPSFYASHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPSFW 640
Query: 613 GEALLTAVHLINR 625
A+ AV LINR
Sbjct: 641 SYAIHHAVFLINR 653
>IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr03_pseudomolecule_IMGAG_V3
12336621-12336989 H EGN_Mt090430 20090702
Length = 122
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 274 ANVIDEFQLFIEDTINLATQETSWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLL 333
+N+ + +L + + ++ +SWVIDSG ++H S R+ FSSYT G VK+A + +L
Sbjct: 7 SNLTYDNELLLVEEHDIVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEGVL 66
Query: 334 KVVGKGDICLETENGSRLILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLT 389
K VG D+ LE NG++L LKD HV D+ NL+S+ +L DE + S F + WK++
Sbjct: 67 KCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr05_pseudomolecule_IMGAG_V3
30911334-30910966 H EGN_Mt090430 20090702
Length = 122
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 274 ANVIDEFQLFIEDTINLATQETSWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLL 333
+N+ + +L + + ++ +SWVIDSG ++H S R+ FSSYT G VK+A + +L
Sbjct: 7 SNLTYDNELLLVEEHDIVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEGVL 66
Query: 334 KVVGKGDICLETENGSRLILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLT 389
K VG D+ LE NG++L LKD HV D+ NL+S+ +L DE + S F + WK++
Sbjct: 67 KCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr3g044280.1 hypothetical retrotransposon, related
chr03_pseudomolecule_IMGAG_V3 12337068-12337358 H
EGN_Mt090430 20090702
Length = 96
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 425 VELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAGKHNRVAFKISXPSRMKNV 484
VELWHKRL HM EK M L K+N+LS + HL+KC C+ K ++V+F+ P R +
Sbjct: 8 VELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHSPKR-PTI 66
Query: 485 LDLVHSDLCGPL-TMSYGGNRYFITFIDDH 513
LDLVH L GP+ T + GG+ YF++FIDDH
Sbjct: 67 LDLVHCHLFGPMKTGTIGGSTYFLSFIDDH 96
>IMGA|Medtr5g082230.1 hypothetical retrotransposon, related
chr05_pseudomolecule_IMGAG_V3 30910887-30910597 H
EGN_Mt090430 20090702
Length = 96
Score = 92.0 bits (227), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 61/90 (67%), Gaps = 2/90 (2%)
Query: 425 VELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCMAGKHNRVAFKISXPSRMKNV 484
VELWHKRL HM EK M L K+N+LS + HL+KC C+ K ++V+F+ P R +
Sbjct: 8 VELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHSPKR-PTI 66
Query: 485 LDLVHSDLCGPL-TMSYGGNRYFITFIDDH 513
LDLVH L GP+ T + GG+ YF++FIDDH
Sbjct: 67 LDLVHCHLFGPMKTGTIGGSTYFLSFIDDH 96
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 82.4 bits (202), Expect = 1e-15, Method: Composition-based stats.
Identities = 40/90 (44%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 581 PQLNSLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPERVW 640
PQ N +AERMN+TL+E+ R +LS+ L++ FW EA+ T +L+NR + T +W
Sbjct: 6 PQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYELW 65
Query: 641 SGKDVSYDHLRVFGCKAFVHIP--KDERSK 668
GK V Y +LRVFGC + H+ K ER K
Sbjct: 66 PGKSVDYSNLRVFGCTVYYHVNEWKLERRK 95
>IMGA|Medtr6g069750.1 Reverse transcriptase, putative
chr06_pseudomolecule_IMGAG_V3 12976555-12977103 H
EGN_Mt090430 20090702
Length = 149
Score = 82.0 bits (201), Expect = 2e-15, Method: Composition-based stats.
Identities = 48/150 (32%), Positives = 73/150 (48%), Gaps = 29/150 (19%)
Query: 836 MQDEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGI 895
MQ E+ +L T++ W+++IK S R+KARLVVKG+NQ +G
Sbjct: 1 MQAEITALENTGTWKLVDLPPNVKPIGCRWIYKIKHYADGSIQRYKARLVVKGYNQVEGW 60
Query: 896 DFDEIFSPVVK----------------------------MTSIRTVLRMAASFNLEIEQM 927
D+ + +SPV K MT++RTV+ +A+ I ++
Sbjct: 61 DYFDTYSPVAKLTTARLVVKGYNQVEGWDYFDTYSLVAKMTTVRTVIALASINQWHIHKL 120
Query: 928 DVKTAFLHSDLEEEIYMEQPEGFIKKGKEN 957
D +AFLH DL+E++YM P+G I K N
Sbjct: 121 DANSAFLHGDLQEDVYMLIPQG-ITTSKPN 149
>IMGA|Medtr8g128700.1 Integrase, catalytic region
chr08_pseudomolecule_IMGAG_V3 30179122-30179823 H
EGN_Mt090430 20090702
Length = 193
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/175 (34%), Positives = 88/175 (50%), Gaps = 13/175 (7%)
Query: 354 KDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLT-----KGSMVIANGRKDPKLYVMH 408
+D+ V D H++ + LD +G+W LT G++V+A K LY +
Sbjct: 21 EDIALVVDGHTHYTDVWVLDSGASYHICPRGEWFLTYEQLDGGNIVMAASVKRGTLYFLQ 80
Query: 409 AKLSLDAFNVA----NDNSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKCSDCM 464
D VA + +LWH RLGHMSE+GM L K+N+L G K+ S+
Sbjct: 81 GTTLTDYGVVASFEIDQEDMTKLWHMRLGHMSERGMQILAKDNLLYG-HKIKDPGLSEHY 139
Query: 465 A-GKHNRVAFKISXPSRMKNVLDLVHSDLCGPLTM-SYGGNRYFITFIDDHSKKT 517
A GK +R F + R K LD +H D P + S GG++YF++ IDD+S+ T
Sbjct: 140 AFGKRHRNKF-LKVIHRTKGTLDYIHDDCWEPSRVESLGGHKYFLSLIDDYSRMT 193
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 1/113 (0%)
Query: 598 VRCLLSHAKLSKRFWGEALLTAVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKA 657
VR +L K+ FWG A+ TA +++NR ++ PE +WS + S +L+VFG
Sbjct: 2 VRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSIF 61
Query: 658 FVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKMIRSRDVVFVENQ 710
+ H+P R KL+ KT + +GY + YR KK+ +RDV +E +
Sbjct: 62 YKHVPDSRRKKLEDKTEAMILVGY-HNTGAYRLLDLHSKKISITRDVKVLEEE 113
>IMGA|Medtr1g076760.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 15437706-15436255 H
EGN_Mt090430 20090702
Length = 186
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 13/95 (13%)
Query: 606 KLSK-RFWGEALLTAVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKD 664
KLSK GEAL T VH++N S V LQY+ +++W K++SYDHL VFGCK +
Sbjct: 102 KLSKGSMIGEALSTIVHVLNLSPSVSLQYEVRDKIWLRKNISYDHLCVFGCKTY------ 155
Query: 665 ERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKKMI 699
VK++ C+F+ Y D YRF+ KK+I
Sbjct: 156 ------VKSQHCMFLCYDLDGADYRFYDCDMKKLI 184
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 4/95 (4%)
Query: 304 TLHATSRRENFSSYTLDNLGVVK----IADDKLLKVVGKGDICLETENGSRLILKDVVHV 359
T H S+ + + Y L L ++ +A ++ LK VG G++ + NG++L LKDV +V
Sbjct: 15 TSHNFSKSPDATRYELQGLLALEFCQVLAYERELKSVGLGEVKWKMSNGTKLTLKDVNYV 74
Query: 360 PDMHSNLISIGRLDDENFCSTFRKGQWKLTKGSMV 394
PD+ NL+S+ +L DE + F + WKL+KGSM+
Sbjct: 75 PDIRLNLLSVAKLRDEGYDRLFSQYSWKLSKGSMI 109
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 501 GGNRYFITFIDDHSKKTWVYTLKSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEY-T 559
GG RYF+ FIDD+S TW+Y +K++ E+ ++ F +++ Q K +K R DN EY
Sbjct: 2 GGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYRD 61
Query: 560 GIFDAFCKEHGIQHQTTPPKMPQLNSLAERMNRTLMERVRCLLSHA 605
+F E G + + P Q AER +R +++ V +L A
Sbjct: 62 SKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISA 107
>IMGA|Medtr4g019480.1 Integrase, catalytic region
chr04_pseudomolecule_IMGAG_V3 3983257-3980975 H
EGN_Mt090430 20090702
Length = 102
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 43/66 (65%)
Query: 471 VAFKISXPSRMKNVLDLVHSDLCGPLTMSYGGNRYFITFIDDHSKKTWVYTLKSKDEVLD 530
V+F S P + N+LDLVHSD+C + S G YF+TFIDDHS+K + +KSK +V
Sbjct: 32 VSFHESSPHKRPNLLDLVHSDICMMDSKSIDGASYFVTFIDDHSRKVQTFVMKSKGQVPC 91
Query: 531 VFKQFL 536
+F Q +
Sbjct: 92 IFMQVI 97
>IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr07_pseudomolecule_IMGAG_V3 6252058-6249983
H EGN_Mt090430 20090702
Length = 509
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 928 DVKTAFLHSDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWYXKFESIIGEQ 987
D FLH DL+E++YM P+G + + VCKL KSLYGLKQA R+W+ K S++
Sbjct: 204 DANNTFLHGDLQEDVYMHPPQG-VSPPRPGQVCKLLKSLYGLKQASRRWFEKLISLLLTI 262
Query: 988 GY 989
G+
Sbjct: 263 GF 264
>IMGA|Medtr5g089840.1 copia LTR rider, related
chr05_pseudomolecule_IMGAG_V3 34952559-34951978 H
EGN_Mt090430 20090702
Length = 154
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 2/115 (1%)
Query: 80 RTLWDKLEELYASKSGNNQLFYLTKLMNFKYQKGTSVADHLSEMQVTIHQLSNMGIKFDD 139
+ LW+KLE LY +K +N+L + N + +GT ++DHLS + + +L ++ +K DD
Sbjct: 19 KELWEKLEGLYQAKGISNRLLLKEQFHNLRMDEGTKISDHLSTLNNIVSELESIEVKIDD 78
Query: 140 KILGLMVFASLPESWETLKISITNSTPHSGVSLEFVKNAVLNEEMRRKTQNPSSS 194
+ L + SLP S+ LK + +S E V +++EEM K+ +SS
Sbjct: 79 EDKTLRIILSLPPSYVHLKPVLMYG--KESLSFEEVATKIISEEMTMKSDESTSS 131
>IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 2876704-2878630 E
EGN_Mt090430 20090702
Length = 64
Score = 61.2 bits (147), Expect = 3e-09, Method: Composition-based stats.
Identities = 29/53 (54%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 927 MDVKTAFLHSDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWYXK 979
MDV AFLH DL+E++YM+ P GF VCKLRKS Y LK AP+ W+ K
Sbjct: 1 MDVHNAFLHGDLQEDVYMKLPRGF-HTSSSRLVCKLRKSQYVLKHAPQCWFAK 52
>IMGA|Medtr3g044010.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 12181817-12181315 H
EGN_Mt090430 20090702
Length = 133
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 54/123 (43%), Gaps = 29/123 (23%)
Query: 327 IADDKLLKVVGKGDICLETENGSRLILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQW 386
+A+ + KVVG G I + T NG L +V VP M N IS+ LD + F
Sbjct: 1 MANSYVSKVVGMGSIKIRTHNGKFCTLNEVRPVPHMTKNQISLSLLDKKGFS-------- 52
Query: 387 KLTKGSMVIANGRKDPKLYVMHAKLSLDAFNVANDNSAVELWHKRLGHMSEKGMTTLVKN 446
K +V+A+ D K LWH RLGHMSE GM L K+
Sbjct: 53 --FKSEVVVASSEIDHK-------------------DMTRLWHMRLGHMSESGMQILAKD 91
Query: 447 NML 449
N+L
Sbjct: 92 NLL 94
>IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related
chr05_pseudomolecule_IMGAG_V3 21011474-21012209 E
EGN_Mt090430 20090702
Length = 210
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 11/159 (6%)
Query: 292 TQETSWVIDSGATLHATSRRENFSSYTLDNLGV-VKIADDKLLKVVGKGDICLETENGSR 350
T+ SW++DSGA+ H T + + + +G V + + + +G + L +G R
Sbjct: 31 TKLESWILDSGASNHMTGTLQ-YMHDVKEVIGCPVGLPNCRTTTCTKEGTVKLT--DGLR 87
Query: 351 LILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQWKLTK---GSMVIANGRKDPKLYVM 407
L ++V++VP ++ NLISI +L DE C+ G + + M+I G + LY
Sbjct: 88 L--ENVLYVPKLNCNLISISQLLDELNCNVQFNGNFCAIQDRTSKMLIGAGEQRDGLYFF 145
Query: 408 HAKLSLDAFNVANDNSAVELWHKRLGHMSEKGMTTLVKN 446
+ A V N +E+WHKRLGH S K T LV N
Sbjct: 146 REVPKVKACKVEGTNQ-LEVWHKRLGHPSWK-TTQLVSN 182
>IMGA|Medtr3g097840.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 23539798-23540964 E
EGN_Mt090430 20090702
Length = 54
Score = 54.7 bits (130), Expect = 3e-07, Method: Composition-based stats.
Identities = 24/50 (48%), Positives = 32/50 (64%)
Query: 618 TAVHLINRSLCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERS 667
TA+ LIN + + L D RVW GK Y +LRV GC+AFVHIP +++
Sbjct: 3 TAIDLINLTPSILLDGDVRNRVWIGKYACYGYLRVLGCRAFVHIPSPQKT 52
>IMGA|Medtr7g116810.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 27118605-27118065 H
EGN_Mt090430 20090702
Length = 141
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 651 RVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFYPLQKK 697
++FGC +FV+I D RSKLD + +CVFIGY Q GY ++P K
Sbjct: 10 KIFGCTSFVYIQSDGRSKLDPRALKCVFIGYSSTQKGYICYHPPSHK 56
>IMGA|Medtr8g012170.1 polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 1857213-1857446 H
EGN_Mt090430 20090702
Length = 77
Score = 53.9 bits (128), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 25/34 (73%)
Query: 944 MEQPEGFIKKGKENYVCKLRKSLYGLKQAPRQWY 977
M QP GF+ N VCKLRKSLYGLKQAP+ W+
Sbjct: 1 MSQPYGFVHPQHPNQVCKLRKSLYGLKQAPQAWF 34
>IMGA|Medtr4g110620.1 polyprotein-like, related
chr04_pseudomolecule_IMGAG_V3 25158785-25159321 H
EGN_Mt090430 20090702
Length = 178
Score = 53.5 bits (127), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 74/173 (42%), Gaps = 20/173 (11%)
Query: 68 NVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQKGTSVADHLSEMQVTI 127
N+ ++ N A+ KLE LY +K +NQLF K N +GT + +HL + I
Sbjct: 24 NLPANVQNLRSAKEFCKKLEGLYQAKKISNQLFPKEKFHNLHMDEGTKIFNHLCTLNDII 83
Query: 128 HQLSNMGIKFDDKILGLMVFASLPESWETLKISITNSTPHSGVSLEFVKNAVLNEEMRRK 187
+L ++ +K D+ L + SLP + LK+ + K +++EE RR
Sbjct: 84 FELESIKVKIYDEDKALSLILSLPPFYVHLKLVLMYGKESLSFEEVATKIKIISEE-RRM 142
Query: 188 TQNPSSSQSDILLADAKRNNHPRGRSQSRSSNTRDKSRGRSNKFANIVCHHCG 240
+ S+S S +LL T+ + G+ N+ C CG
Sbjct: 143 KSDESTSSSLMLL-------------------TKSGANGKRIGAKNMACWKCG 176
>IMGA|Medtr1g102740.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21153367-21155226 E
EGN_Mt090430 20090702
Length = 234
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%)
Query: 297 WVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKDV 356
WV+DSG T H+T R F IA+ + + G G + +E+ +G +LIL +V
Sbjct: 13 WVVDSGCTTHSTYDRNLFKELKKTTNTKATIANGAYIPIEGIGTVEIESRSGVKLILNNV 72
Query: 357 VHVPDMHSNLISIGRLDDENFCSTFRKGQ 385
++P+ +L+S+ L +E + F++ +
Sbjct: 73 NYIPENCYSLLSVAGLLEEGYQVLFKRNK 101
>IMGA|Medtr5g046390.1 gag-pol polyprotein, related
chr05_pseudomolecule_IMGAG_V3 19508075-19507539 H
EGN_Mt090430 20090702
Length = 178
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 297 WVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRLILKDV 356
W+IDSGAT + T RE F+ V+++A+ + G G I + +GS+L+L +V
Sbjct: 12 WLIDSGATNNLTCDREVFTELDKSYSSVIRVANGAEITSEGIGTIVFKNHSGSKLVL-NV 70
Query: 357 VHVPDMHSNLISIGRL 372
++VP + NL+S+ +L
Sbjct: 71 LYVPQISENLLSVPQL 86
>IMGA|Medtr4g104320.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 22711151-22711574 H
EGN_Mt090430 20090702
Length = 99
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 32/49 (65%)
Query: 926 QMDVKTAFLHSDLEEEIYMEQPEGFIKKGKENYVCKLRKSLYGLKQAPR 974
D+K FL+ LEE ++++QP G K KE V KL K LYGLKQAPR
Sbjct: 50 HFDMKLYFLNGSLEETMFVKQPSGLEIKCKEENVYKLHKDLYGLKQAPR 98
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 2/89 (2%)
Query: 523 KSKDEVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGIFDAFCKEHGIQHQTTPPKMPQ 582
K+K EV + F+ +E Q K+K +RTDNG E+ + F GI+HQT+ + PQ
Sbjct: 4 KTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEF--LMPDFYSSKGIEHQTSCVETPQ 61
Query: 583 LNSLAERMNRTLMERVRCLLSHAKLSKRF 611
N ER ++ ++ R +L +K F
Sbjct: 62 QNGRVERKHQHILNVARAMLFQSKFMVLF 90
>IMGA|Medtr1g102780.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21184395-21181931 E
EGN_Mt090430 20090702
Length = 311
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%)
Query: 292 TQETSWVIDSGATLHATSRRENFSSYTLDNLGVVKIADDKLLKVVGKGDICLETENGSRL 351
T WV++SG T H+T R F IA+ + + G G + +E+ +G +L
Sbjct: 31 TPSNFWVVESGCTTHSTYDRNLFKELKKTTNTKATIANGAYIPIEGIGTVEIESRSGVKL 90
Query: 352 ILKDVVHVPDMHSNLISIGRLDDENFCSTFRKGQ 385
IL +V ++P+ +L+S+ L +E + F++ +
Sbjct: 91 ILNNVNYIPENCYSLLSVAGLLEEGYQVLFKRNK 124