Jatropha Genome Database

JcCA0045571.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0045571.10 - phase: 0 
         (175 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233656_29.1 Mannose-6-phosphate isomerase, type I AC23365...   109   9e-25

>IMGA|AC233656_29.1 Mannose-6-phosphate isomerase, type I AC233656.1
           117027-112130 E EGN_Mt090430 20090702
          Length = 333

 Score =  109 bits (272), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 50/60 (83%), Positives = 57/60 (95%)

Query: 116 KVLSVAKALSIQAHPDKELAKMLHKLHPDVYKDDNHKPEMALAITEFQALCGFISLKVLR 175
           +VLSV KALSIQAHPDKELA+MLHKLHPDVYKD NHKPEMALA+T+F+ALCGFI+LK L+
Sbjct: 13  QVLSVGKALSIQAHPDKELARMLHKLHPDVYKDGNHKPEMALAMTDFEALCGFITLKELK 72