Jatropha Genome Database
- JcCA0044231.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0044231.20 - phase: 0
(440 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g143520.1 Pentatricopeptide repeat chr01_pseudomolecu... 627 e-180
IMGA|Medtr5g020540.1 Pentatricopeptide repeat chr05_pseudomolecu... 347 4e-96
IMGA|Medtr3g069190.1 Pentatricopeptide repeat chr03_pseudomolecu... 335 2e-92
IMGA|Medtr3g132780.1 Pentatricopeptide repeat chr03_pseudomolecu... 331 5e-91
IMGA|AC234702_5.1 Pentatricopeptide repeat AC234702.1 42306-4480... 326 1e-89
IMGA|Medtr4g005700.1 Asp/Glu racemase chr04_pseudomolecule_IMGAG... 322 3e-88
IMGA|Medtr6g069810.1 Pentatricopeptide repeat chr06_pseudomolecu... 320 6e-88
IMGA|Medtr8g029460.1 Pentatricopeptide repeat chr08_pseudomolecu... 317 6e-87
IMGA|Medtr7g032150.1 Pentatricopeptide repeat chr07_pseudomolecu... 316 2e-86
IMGA|Medtr5g046620.1 Pentatricopeptide repeat chr05_pseudomolecu... 314 4e-86
IMGA|Medtr5g018690.1 Pentatricopeptide repeat chr05_pseudomolecu... 313 1e-85
IMGA|Medtr4g025960.1 N-6 Adenine-specific DNA methylase; Methylt... 307 5e-84
IMGA|Medtr4g025770.1 N-6 Adenine-specific DNA methylase; Methylt... 307 5e-84
IMGA|Medtr3g143210.1 Pentatricopeptide repeat chr03_pseudomolecu... 305 3e-83
IMGA|Medtr5g098900.1 Pentatricopeptide repeat chr05_pseudomolecu... 302 2e-82
IMGA|Medtr4g136520.1 Pentatricopeptide repeat chr04_pseudomolecu... 301 5e-82
IMGA|Medtr4g155250.1 Pentatricopeptide repeat chr04_pseudomolecu... 300 7e-82
IMGA|Medtr3g139040.1 Pentatricopeptide repeat chr03_pseudomolecu... 298 3e-81
IMGA|Medtr3g127370.1 Pentatricopeptide repeat chr03_pseudomolecu... 297 7e-81
IMGA|Medtr1g047310.1 Pentatricopeptide repeat chr01_pseudomolecu... 296 1e-80
IMGA|Medtr5g006540.1 Pentatricopeptide repeat chr05_pseudomolecu... 293 9e-80
IMGA|Medtr6g013350.1 Pentatricopeptide repeat chr06_pseudomolecu... 292 2e-79
IMGA|Medtr4g134960.1 Pentatricopeptide repeat chr04_pseudomolecu... 292 2e-79
IMGA|Medtr8g073570.1 Pentatricopeptide repeat chr08_pseudomolecu... 291 4e-79
IMGA|Medtr1g087270.1 Pentatricopeptide repeat chr01_pseudomolecu... 291 6e-79
IMGA|Medtr4g129330.1 Protein of unknown function DUF177 chr04_ps... 291 6e-79
IMGA|Medtr8g079150.1 Pentatricopeptide repeat chr08_pseudomolecu... 288 3e-78
IMGA|Medtr1g071450.1 Pentatricopeptide repeat chr01_pseudomolecu... 286 1e-77
IMGA|Medtr7g084500.1 Pentatricopeptide repeat chr07_pseudomolecu... 285 3e-77
IMGA|Medtr7g096840.1 Pentatricopeptide repeat chr07_pseudomolecu... 283 1e-76
IMGA|Medtr4g134470.1 Pentatricopeptide repeat chr04_pseudomolecu... 281 3e-76
IMGA|Medtr8g119600.1 Pancreatic ribonuclease chr08_pseudomolecul... 280 8e-76
IMGA|Medtr7g010380.1 Pentatricopeptide repeat chr07_pseudomolecu... 280 8e-76
IMGA|Medtr2g110280.1 Pentatricopeptide repeat chr02_pseudomolecu... 280 1e-75
IMGA|Medtr8g077580.1 Asp/Glu racemase chr08_pseudomolecule_IMGAG... 280 1e-75
IMGA|Medtr3g110100.1 Pentatricopeptide repeat chr03_pseudomolecu... 278 4e-75
IMGA|Medtr6g070460.1 Pentatricopeptide repeat chr06_pseudomolecu... 278 4e-75
IMGA|Medtr1g008660.1 Pentatricopeptide repeat chr01_pseudomolecu... 278 5e-75
IMGA|Medtr7g088050.1 Pentatricopeptide repeat chr07_pseudomolecu... 277 6e-75
IMGA|Medtr1g100400.1 Pentatricopeptide repeat chr01_pseudomolecu... 277 6e-75
IMGA|Medtr7g088110.1 Pentatricopeptide repeat chr07_pseudomolecu... 276 1e-74
IMGA|Medtr7g083950.1 Tetratricopeptide-like helical, identical c... 276 1e-74
IMGA|Medtr4g154400.1 Pentatricopeptide repeat chr04_pseudomolecu... 276 2e-74
IMGA|Medtr8g144980.1 Pentatricopeptide repeat chr08_pseudomolecu... 275 3e-74
IMGA|Medtr1g046640.1 Pentatricopeptide repeat chr01_pseudomolecu... 274 5e-74
IMGA|Medtr7g037660.1 Pentatricopeptide repeat chr07_pseudomolecu... 273 9e-74
IMGA|Medtr5g006710.1 Pentatricopeptide repeat chr05_pseudomolecu... 272 2e-73
IMGA|Medtr2g105210.1 Pentatricopeptide repeat chr02_pseudomolecu... 271 3e-73
IMGA|Medtr1g017120.1 Peptidase S8 and S53, subtilisin, kexin, se... 271 5e-73
IMGA|Medtr7g083620.1 Pentatricopeptide repeat chr07_pseudomolecu... 270 1e-72
IMGA|CU179634_15.1 pentatricopeptide, putative CU179634.6 64404-... 270 1e-72
IMGA|Medtr7g011110.1 Pentatricopeptide repeat chr07_pseudomolecu... 269 2e-72
IMGA|Medtr2g041810.1 Pentatricopeptide repeat chr02_pseudomolecu... 268 3e-72
IMGA|Medtr7g130260.1 Pentatricopeptide repeat chr07_pseudomolecu... 268 5e-72
IMGA|Medtr3g151720.1 Pentatricopeptide repeat chr03_pseudomolecu... 266 1e-71
IMGA|Medtr4g021980.1 Site-specific DNA-methyltransferase (cytosi... 266 2e-71
IMGA|Medtr4g021790.1 Site-specific DNA-methyltransferase (cytosi... 266 2e-71
IMGA|Medtr5g047050.1 Pentatricopeptide repeat chr05_pseudomolecu... 264 7e-71
IMGA|Medtr4g024720.1 Pentatricopeptide repeat chr04_pseudomolecu... 263 1e-70
IMGA|Medtr7g080560.1 Pentatricopeptide repeat chr07_pseudomolecu... 262 2e-70
IMGA|Medtr2g122730.1 Pentatricopeptide repeat chr02_pseudomolecu... 262 2e-70
IMGA|Medtr7g005540.1 Pentatricopeptide repeat chr07_pseudomolecu... 262 3e-70
IMGA|Medtr5g023020.1 Phospholipase D/Transphosphatidylase chr05_... 261 4e-70
IMGA|Medtr7g106280.1 Pentatricopeptide repeat chr07_pseudomolecu... 261 5e-70
IMGA|Medtr4g157180.1 Pentatricopeptide repeat chr04_pseudomolecu... 261 6e-70
IMGA|Medtr8g077950.1 Pentatricopeptide repeat chr08_pseudomolecu... 260 8e-70
IMGA|Medtr5g103280.1 Pentatricopeptide repeat chr05_pseudomolecu... 260 9e-70
IMGA|Medtr4g101330.1 Pentatricopeptide repeat chr04_pseudomolecu... 259 2e-69
IMGA|Medtr3g143170.1 Pentatricopeptide repeat chr03_pseudomolecu... 259 2e-69
IMGA|Medtr5g044270.1 Pentatricopeptide repeat chr05_pseudomolecu... 259 2e-69
IMGA|Medtr8g112690.1 Pentatricopeptide repeat chr08_pseudomolecu... 259 2e-69
IMGA|Medtr5g046330.1 Pentatricopeptide repeat chr05_pseudomolecu... 258 3e-69
IMGA|Medtr2g049690.1 Pentatricopeptide repeat chr02_pseudomolecu... 257 9e-69
IMGA|Medtr1g008670.1 Pentatricopeptide repeat chr01_pseudomolecu... 256 1e-68
IMGA|Medtr4g108510.1 Pentatricopeptide repeat chr04_pseudomolecu... 256 1e-68
IMGA|Medtr3g162760.1 Pentatricopeptide repeat chr03_pseudomolecu... 256 2e-68
IMGA|Medtr3g104680.1 Pentatricopeptide repeat chr03_pseudomolecu... 253 1e-67
IMGA|Medtr7g110740.1 Pentatricopeptide repeat chr07_pseudomolecu... 253 1e-67
IMGA|Medtr7g133330.1 Pentatricopeptide repeat chr07_pseudomolecu... 253 1e-67
IMGA|Medtr8g145930.1 Pentatricopeptide repeat chr08_pseudomolecu... 253 2e-67
IMGA|Medtr3g125360.1 Pentatricopeptide repeat chr03_pseudomolecu... 251 5e-67
IMGA|Medtr1g083640.1 Pentatricopeptide repeat chr01_pseudomolecu... 251 6e-67
IMGA|Medtr7g121000.1 Pentatricopeptide repeat chr07_pseudomolecu... 251 6e-67
IMGA|Medtr3g151660.1 Pentatricopeptide repeat chr03_pseudomolecu... 251 6e-67
IMGA|AC233668_41.1 Pentatricopeptide repeat AC233668.2 172839-16... 250 8e-67
IMGA|Medtr2g056270.1 Bacterial extracellular solute-binding prot... 250 1e-66
IMGA|AC233680_25.1 Pentatricopeptide repeat AC233680.1 106255-10... 250 1e-66
IMGA|Medtr3g012790.1 pentatricopeptide, related chr03_pseudomole... 249 1e-66
IMGA|Medtr7g015110.1 Pentatricopeptide repeat chr07_pseudomolecu... 249 2e-66
IMGA|Medtr2g026800.1 Pentatricopeptide repeat chr02_pseudomolecu... 249 2e-66
IMGA|Medtr8g139760.1 Pentatricopeptide repeat chr08_pseudomolecu... 249 2e-66
IMGA|Medtr4g149390.1 Pentatricopeptide repeat chr04_pseudomolecu... 249 2e-66
IMGA|Medtr2g074200.1 Pentatricopeptide repeat chr02_pseudomolecu... 248 6e-66
IMGA|Medtr5g024360.1 Pentatricopeptide repeat chr05_pseudomolecu... 247 1e-65
IMGA|Medtr5g008630.1 Pentatricopeptide repeat chr05_pseudomolecu... 246 1e-65
IMGA|Medtr1g046540.1 Pentatricopeptide repeat chr01_pseudomolecu... 246 1e-65
IMGA|Medtr8g077070.1 Pentatricopeptide repeat chr08_pseudomolecu... 246 2e-65
IMGA|Medtr5g095400.1 Pentatricopeptide repeat chr05_pseudomolecu... 246 2e-65
IMGA|Medtr1g087400.1 Pentatricopeptide repeat chr01_pseudomolecu... 246 2e-65
IMGA|AC235092_12.1 Aldo/keto reductase AC235092.1 69694-72297 H ... 246 2e-65
IMGA|Medtr7g015730.1 Pentatricopeptide repeat chr07_pseudomolecu... 244 6e-65
IMGA|Medtr1g013720.1 Pentatricopeptide repeat chr01_pseudomolecu... 244 7e-65
IMGA|Medtr5g101670.1 Pentatricopeptide repeat chr05_pseudomolecu... 244 8e-65
IMGA|Medtr4g159620.1 Pentatricopeptide repeat chr04_pseudomolecu... 243 1e-64
IMGA|Medtr4g013250.1 Pentatricopeptide repeat chr04_pseudomolecu... 240 1e-63
IMGA|Medtr8g088980.1 Pentatricopeptide repeat chr08_pseudomolecu... 240 1e-63
IMGA|Medtr6g069900.1 Pentatricopeptide repeat chr06_pseudomolecu... 239 2e-63
IMGA|AC235567_11.1 Pentatricopeptide repeat AC235567.1 44989-430... 238 4e-63
IMGA|Medtr7g096950.1 Pentatricopeptide repeat chr07_pseudomolecu... 237 8e-63
IMGA|Medtr4g128840.1 Pentatricopeptide repeat chr04_pseudomolecu... 236 1e-62
IMGA|Medtr4g128730.1 Pentatricopeptide repeat chr04_pseudomolecu... 236 2e-62
IMGA|Medtr4g011410.1 Pentatricopeptide repeat chr04_pseudomolecu... 236 2e-62
IMGA|Medtr7g010260.1 Pentatricopeptide repeat chr07_pseudomolecu... 234 5e-62
IMGA|Medtr2g015190.1 Pentatricopeptide repeat chr02_pseudomolecu... 234 5e-62
IMGA|Medtr8g112300.1 Pentatricopeptide repeat chr08_pseudomolecu... 233 1e-61
IMGA|Medtr4g084310.1 Pentatricopeptide repeat chr04_pseudomolecu... 233 1e-61
IMGA|Medtr2g018960.1 Pentatricopeptide repeat chr02_pseudomolecu... 231 6e-61
IMGA|Medtr4g136780.1 Pentatricopeptide repeat chr04_pseudomolecu... 231 6e-61
IMGA|Medtr5g028120.1 Pentatricopeptide repeat chr05_pseudomolecu... 231 8e-61
IMGA|Medtr7g099640.1 Asp/Glu racemase chr07_pseudomolecule_IMGAG... 230 1e-60
IMGA|Medtr5g014130.1 Pentatricopeptide repeat chr05_pseudomolecu... 230 1e-60
IMGA|Medtr8g118960.1 Pentatricopeptide repeat chr08_pseudomolecu... 230 1e-60
IMGA|Medtr5g046740.1 Pentatricopeptide repeat chr05_pseudomolecu... 229 3e-60
IMGA|Medtr1g102670.1 Pentatricopeptide repeat chr01_pseudomolecu... 228 5e-60
IMGA|Medtr8g089650.1 Pentatricopeptide repeat chr08_pseudomolecu... 228 5e-60
IMGA|Medtr4g115870.1 WD-40 repeat; Pentatricopeptide repeat chr0... 227 7e-60
IMGA|Medtr2g007690.1 Pentatricopeptide repeat chr02_pseudomolecu... 226 2e-59
IMGA|Medtr7g089550.1 Pentatricopeptide repeat chr07_pseudomolecu... 225 3e-59
IMGA|Medtr5g022670.1 Pentatricopeptide repeat chr05_pseudomolecu... 225 4e-59
IMGA|Medtr3g147780.1 Calcium-binding EF-hand chr03_pseudomolecul... 224 6e-59
IMGA|Medtr8g148290.1 Pentatricopeptide repeat chr08_pseudomolecu... 224 7e-59
IMGA|Medtr3g031510.1 Asp/Glu racemase chr03_pseudomolecule_IMGAG... 224 8e-59
IMGA|Medtr7g134520.1 Pentatricopeptide repeat chr07_pseudomolecu... 223 2e-58
IMGA|Medtr3g097980.1 Pentatricopeptide repeat chr03_pseudomolecu... 223 2e-58
IMGA|Medtr5g106500.1 Pentatricopeptide repeat chr05_pseudomolecu... 222 2e-58
IMGA|Medtr2g009870.1 Pentatricopeptide repeat chr02_pseudomolecu... 222 3e-58
IMGA|Medtr5g076070.1 Pentatricopeptide repeat chr05_pseudomolecu... 221 4e-58
IMGA|AC233560_17.1 Pentatricopeptide repeat AC233560.2 44393-425... 221 8e-58
IMGA|Medtr7g093890.1 Pentatricopeptide repeat chr07_pseudomolecu... 220 1e-57
IMGA|Medtr3g030450.1 Pentatricopeptide repeat chr03_pseudomolecu... 219 2e-57
IMGA|Medtr7g093710.1 Pentatricopeptide repeat chr07_pseudomolecu... 219 2e-57
IMGA|Medtr5g039620.1 Pentatricopeptide repeat chr05_pseudomolecu... 219 2e-57
IMGA|Medtr1g126340.1 Pentatricopeptide repeat chr01_pseudomolecu... 218 4e-57
IMGA|Medtr1g126060.1 Pentatricopeptide repeat chr01_pseudomolecu... 218 4e-57
IMGA|Medtr8g139400.1 Pentatricopeptide repeat chr08_pseudomolecu... 218 4e-57
IMGA|Medtr4g089900.1 Pentatricopeptide repeat chr04_pseudomolecu... 218 6e-57
IMGA|Medtr3g028620.1 Pentatricopeptide repeat chr03_pseudomolecu... 217 9e-57
IMGA|Medtr5g025610.1 Pentatricopeptide repeat chr05_pseudomolecu... 217 1e-56
IMGA|Medtr5g079480.1 Jacalin-related lectin chr05_pseudomolecule... 214 7e-56
IMGA|AC233070_28.1 Pentatricopeptide repeat AC233070.4 117139-11... 213 2e-55
IMGA|Medtr8g151370.1 Pentatricopeptide repeat chr08_pseudomolecu... 213 2e-55
IMGA|Medtr5g018430.1 Pentatricopeptide repeat chr05_pseudomolecu... 204 9e-53
IMGA|Medtr5g008760.1 Pentatricopeptide repeat chr05_pseudomolecu... 203 1e-52
IMGA|Medtr2g024580.1 Pentatricopeptide repeat chr02_pseudomolecu... 202 3e-52
IMGA|Medtr5g008890.1 Pentatricopeptide repeat chr05_pseudomolecu... 201 8e-52
IMGA|Medtr5g012750.1 Pentatricopeptide repeat chr05_pseudomolecu... 200 1e-51
IMGA|Medtr2g056180.1 Pentatricopeptide repeat chr02_pseudomolecu... 198 5e-51
IMGA|Medtr7g139320.1 Pentatricopeptide repeat chr07_pseudomolecu... 197 7e-51
IMGA|Medtr5g032920.1 Pentatricopeptide repeat chr05_pseudomolecu... 197 1e-50
IMGA|AC174330_9.1 Pentatricopeptide repeat AC174330.20 67096-650... 196 2e-50
IMGA|Medtr3g163150.1 Pentatricopeptide repeat chr03_pseudomolecu... 193 2e-49
IMGA|Medtr5g024020.1 pentatricopeptide, related chr05_pseudomole... 192 3e-49
IMGA|Medtr8g139170.1 Pentatricopeptide repeat chr08_pseudomolecu... 190 1e-48
IMGA|Medtr8g073340.1 Pentatricopeptide repeat chr08_pseudomolecu... 188 4e-48
IMGA|Medtr3g114590.1 Ribosomal protein L11; Sugar transporter su... 184 6e-47
IMGA|Medtr5g008330.1 Pentatricopeptide repeat chr05_pseudomolecu... 183 1e-46
IMGA|Medtr2g033760.1 Pentatricopeptide repeat chr02_pseudomolecu... 181 5e-46
IMGA|Medtr2g105320.1 Pentatricopeptide repeat chr02_pseudomolecu... 164 7e-41
IMGA|Medtr2g105220.1 Pentatricopeptide repeat chr02_pseudomolecu... 163 2e-40
IMGA|Medtr6g069840.1 Pentatricopeptide repeat chr06_pseudomolecu... 162 2e-40
IMGA|Medtr2g096680.1 Pentatricopeptide repeat chr02_pseudomolecu... 161 7e-40
IMGA|Medtr4g155300.1 Pentatricopeptide repeat chr04_pseudomolecu... 153 2e-37
IMGA|Medtr5g033030.1 Pentatricopeptide repeat chr05_pseudomolecu... 151 5e-37
IMGA|Medtr5g105010.1 Pentatricopeptide repeat chr05_pseudomolecu... 150 1e-36
IMGA|Medtr6g030720.1 Pentatricopeptide repeat chr06_pseudomolecu... 144 7e-35
IMGA|Medtr4g156800.1 Pentatricopeptide repeat chr04_pseudomolecu... 141 8e-34
IMGA|Medtr4g156790.1 Pentatricopeptide repeat chr04_pseudomolecu... 140 1e-33
IMGA|Medtr4g155290.1 Pentatricopeptide repeat chr04_pseudomolecu... 138 5e-33
IMGA|Medtr4g032250.1 Protein kinase chr04_pseudomolecule_IMGAG_V... 137 8e-33
IMGA|Medtr2g105310.1 Pentatricopeptide repeat chr02_pseudomolecu... 136 3e-32
IMGA|AC235756_8.1 Pentatricopeptide repeat AC235756.1 67772-6618... 135 3e-32
IMGA|Medtr4g022170.1 Pentatricopeptide repeat chr04_pseudomolecu... 132 4e-31
IMGA|Medtr5g077210.1 Pentatricopeptide repeat chr05_pseudomolecu... 130 1e-30
IMGA|Medtr5g045520.1 Pentatricopeptide repeat chr05_pseudomolecu... 129 3e-30
IMGA|Medtr3g043340.1 Pentatricopeptide repeat chr03_pseudomolecu... 119 2e-27
IMGA|Medtr2g083090.1 WD-40 repeat; Pentatricopeptide repeat chr0... 119 3e-27
IMGA|Medtr5g033110.1 Pentatricopeptide repeat chr05_pseudomolecu... 119 4e-27
IMGA|Medtr2g110310.1 Pentatricopeptide repeat chr02_pseudomolecu... 118 7e-27
IMGA|Medtr3g009070.1 Pentatricopeptide repeat chr03_pseudomolecu... 117 1e-26
IMGA|Medtr6g089890.1 Pentatricopeptide repeat chr06_pseudomolecu... 116 2e-26
IMGA|AC233668_43.1 Pentatricopeptide repeat AC233668.2 177168-18... 115 4e-26
IMGA|Medtr2g120580.1 Pentatricopeptide repeat chr02_pseudomolecu... 112 3e-25
IMGA|Medtr4g114870.1 Pentatricopeptide repeat chr04_pseudomolecu... 111 6e-25
IMGA|Medtr2g026940.1 Pentatricopeptide repeat chr02_pseudomolecu... 108 4e-24
IMGA|Medtr5g102690.1 Pentatricopeptide repeat chr05_pseudomolecu... 107 1e-23
IMGA|Medtr2g006720.1 Pentatricopeptide repeat chr02_pseudomolecu... 106 3e-23
IMGA|Medtr4g129600.1 Pentatricopeptide repeat chr04_pseudomolecu... 104 9e-23
IMGA|Medtr2g056710.1 Pentatricopeptide repeat chr02_pseudomolecu... 104 1e-22
IMGA|Medtr3g080270.1 Pentatricopeptide repeat chr03_pseudomolecu... 102 3e-22
IMGA|Medtr6g093250.1 Pentatricopeptide repeat chr06_pseudomolecu... 102 4e-22
IMGA|Medtr5g085730.1 Pentatricopeptide repeat chr05_pseudomolecu... 101 7e-22
IMGA|Medtr6g089550.1 Pentatricopeptide repeat chr06_pseudomolecu... 100 1e-21
IMGA|Medtr5g097340.1 Pentatricopeptide repeat chr05_pseudomolecu... 100 2e-21
IMGA|AC233662_58.1 Pentatricopeptide repeat AC233662.1 266570-26... 98 1e-20
IMGA|Medtr4g089910.1 TonB box, N-terminal chr04_pseudomolecule_I... 97 1e-20
IMGA|Medtr6g083620.1 Pentatricopeptide repeat chr06_pseudomolecu... 95 9e-20
IMGA|Medtr6g086130.1 Protein of unknown function DUF19 chr06_pse... 94 1e-19
IMGA|Medtr3g123960.1 Pentatricopeptide repeat chr03_pseudomolecu... 94 2e-19
IMGA|Medtr6g076650.1 Pentatricopeptide repeat chr06_pseudomolecu... 93 2e-19
IMGA|Medtr1g065910.1 Pentatricopeptide repeat chr01_pseudomolecu... 93 2e-19
IMGA|Medtr4g155160.1 Pentatricopeptide repeat chr04_pseudomolecu... 92 4e-19
IMGA|Medtr5g006800.1 Pentatricopeptide repeat chr05_pseudomolecu... 92 5e-19
IMGA|Medtr6g093100.1 Pentatricopeptide repeat chr06_pseudomolecu... 92 5e-19
IMGA|Medtr8g112280.1 Pentatricopeptide repeat chr08_pseudomolecu... 91 8e-19
IMGA|Medtr5g008360.1 Pentatricopeptide repeat chr05_pseudomolecu... 91 9e-19
IMGA|Medtr6g083780.1 Pentatricopeptide repeat chr06_pseudomolecu... 91 1e-18
IMGA|Medtr7g015630.1 Smr protein/MutS2 C-terminal chr07_pseudomo... 91 2e-18
IMGA|Medtr1g065870.1 Pentatricopeptide repeat chr01_pseudomolecu... 90 2e-18
IMGA|Medtr8g148450.1 Smr protein/MutS2 C-terminal chr08_pseudomo... 89 3e-18
IMGA|Medtr6g088950.1 Pentatricopeptide repeat chr06_pseudomolecu... 89 3e-18
IMGA|Medtr4g104120.1 Pentatricopeptide repeat chr04_pseudomolecu... 89 4e-18
IMGA|Medtr6g084050.1 Pentatricopeptide repeat chr06_pseudomolecu... 89 4e-18
IMGA|Medtr7g041080.1 Pentatricopeptide repeat chr07_pseudomolecu... 89 5e-18
IMGA|Medtr7g015600.1 Smr protein/MutS2 C-terminal chr07_pseudomo... 89 5e-18
IMGA|Medtr1g035010.1 Pentatricopeptide repeat chr01_pseudomolecu... 88 7e-18
IMGA|Medtr6g089570.1 TonB box, N-terminal chr06_pseudomolecule_I... 88 7e-18
IMGA|Medtr7g012140.1 Pentatricopeptide repeat chr07_pseudomolecu... 88 8e-18
IMGA|Medtr5g105000.1 Tetratricopeptide-like helical, related chr... 87 1e-17
IMGA|AC233656_8.1 Glycoside hydrolase, family 63 AC233656.1 2998... 87 1e-17
IMGA|Medtr7g084210.1 Pentatricopeptide repeat chr07_pseudomolecu... 87 1e-17
IMGA|Medtr6g083270.1 Pentatricopeptide repeat chr06_pseudomolecu... 87 2e-17
IMGA|Medtr8g112650.1 Pentatricopeptide repeat chr08_pseudomolecu... 87 2e-17
IMGA|Medtr6g089850.1 Pentatricopeptide repeat chr06_pseudomolecu... 87 2e-17
IMGA|Medtr3g024680.1 Chaperonin Cpn60/TCP-1 chr03_pseudomolecule... 86 4e-17
IMGA|Medtr4g157210.1 Pentatricopeptide repeat chr04_pseudomolecu... 86 4e-17
IMGA|Medtr3g138450.1 Pentatricopeptide repeat chr03_pseudomolecu... 86 5e-17
IMGA|Medtr4g042010.1 Pentatricopeptide repeat chr04_pseudomolecu... 86 5e-17
IMGA|Medtr6g093050.1 Pentatricopeptide repeat chr06_pseudomolecu... 86 5e-17
IMGA|Medtr6g069830.1 Pentatricopeptide repeat chr06_pseudomolecu... 86 5e-17
IMGA|Medtr6g071400.1 Pentatricopeptide repeat chr06_pseudomolecu... 85 6e-17
IMGA|Medtr6g088920.1 Pentatricopeptide repeat chr06_pseudomolecu... 85 7e-17
IMGA|Medtr6g084020.1 Pentatricopeptide repeat chr06_pseudomolecu... 84 1e-16
IMGA|AC233685_47.1 Pentatricopeptide repeat AC233685.2 215521-21... 84 1e-16
IMGA|Medtr4g092860.1 Pentatricopeptide repeat chr04_pseudomolecu... 84 1e-16
IMGA|Medtr4g090110.1 Pentatricopeptide repeat chr04_pseudomolecu... 84 2e-16
IMGA|Medtr4g035920.1 Pentatricopeptide repeat chr04_pseudomolecu... 84 2e-16
IMGA|Medtr4g132700.1 Pentatricopeptide repeat chr04_pseudomolecu... 84 2e-16
IMGA|Medtr3g117400.1 Pentatricopeptide repeat chr03_pseudomolecu... 84 2e-16
IMGA|Medtr2g041460.1 Pentatricopeptide repeat chr02_pseudomolecu... 83 2e-16
IMGA|Medtr5g007390.1 Pentatricopeptide repeat chr05_pseudomolecu... 83 3e-16
IMGA|Medtr7g010810.1 Pentatricopeptide repeat chr07_pseudomolecu... 82 4e-16
IMGA|Medtr4g158870.1 Pentatricopeptide repeat chr04_pseudomolecu... 82 4e-16
IMGA|Medtr2g110300.1 Pentatricopeptide repeat chr02_pseudomolecu... 82 4e-16
IMGA|Medtr3g105550.1 Pentatricopeptide repeat chr03_pseudomolecu... 82 5e-16
IMGA|Medtr8g009250.1 Pentatricopeptide repeat chr08_pseudomolecu... 82 5e-16
IMGA|Medtr1g093590.1 Pentatricopeptide repeat chr01_pseudomolecu... 82 6e-16
IMGA|Medtr5g040650.1 Pentatricopeptide repeat chr05_pseudomolecu... 81 9e-16
IMGA|Medtr6g088990.1 Pentatricopeptide repeat chr06_pseudomolecu... 80 1e-15
IMGA|Medtr7g025500.1 Pentatricopeptide repeat chr07_pseudomolecu... 80 1e-15
IMGA|Medtr2g022110.1 Pentatricopeptide repeat chr02_pseudomolecu... 80 2e-15
IMGA|Medtr1g143580.1 Pentatricopeptide repeat chr01_pseudomolecu... 80 2e-15
IMGA|Medtr6g089780.1 Pentatricopeptide repeat chr06_pseudomolecu... 80 2e-15
IMGA|Medtr1g020340.1 Pentatricopeptide repeat chr01_pseudomolecu... 79 4e-15
IMGA|Medtr5g097270.1 Pentatricopeptide repeat chr05_pseudomolecu... 79 5e-15
IMGA|AC233685_48.1 Protein Rf1, mitochondrial precursor, related... 79 6e-15
IMGA|Medtr4g089510.1 Pentatricopeptide repeat chr04_pseudomolecu... 78 8e-15
IMGA|Medtr4g140640.1 Pentatricopeptide repeat chr04_pseudomolecu... 78 1e-14
IMGA|Medtr5g018230.1 Pentatricopeptide repeat chr05_pseudomolecu... 77 1e-14
IMGA|Medtr5g048130.1 Pentatricopeptide repeat chr05_pseudomolecu... 77 2e-14
IMGA|Medtr6g086330.1 Pentatricopeptide repeat chr06_pseudomolecu... 77 2e-14
IMGA|Medtr7g067920.1 Pentatricopeptide repeat chr07_pseudomolecu... 77 2e-14
IMGA|Medtr5g029600.1 Pentatricopeptide repeat chr05_pseudomolecu... 76 3e-14
IMGA|Medtr1g013710.1 Pentatricopeptide repeat chr01_pseudomolecu... 76 3e-14
IMGA|Medtr5g024320.1 Pentatricopeptide repeat chr05_pseudomolecu... 76 3e-14
IMGA|Medtr8g086350.1 Pentatricopeptide repeat chr08_pseudomolecu... 76 3e-14
IMGA|Medtr5g025220.1 Pentatricopeptide repeat chr05_pseudomolecu... 76 3e-14
IMGA|AC233651_5.1 Pentatricopeptide repeat AC233651.1 11694-1374... 76 4e-14
IMGA|Medtr3g149040.1 Pentatricopeptide repeat chr03_pseudomolecu... 76 4e-14
IMGA|AC234703_7.1 pentatricopeptide, related AC234703.1 43858-47... 75 6e-14
IMGA|Medtr2g123230.1 Pentatricopeptide repeat chr02_pseudomolecu... 75 6e-14
IMGA|Medtr6g089560.1 Pentatricopeptide repeat chr06_pseudomolecu... 75 7e-14
IMGA|Medtr7g120750.1 Pentatricopeptide repeat chr07_pseudomolecu... 75 7e-14
IMGA|Medtr8g102950.1 Smr protein/MutS2 C-terminal chr08_pseudomo... 74 1e-13
IMGA|Medtr4g100840.1 Pentatricopeptide repeat chr04_pseudomolecu... 74 1e-13
IMGA|Medtr5g102280.1 Pentatricopeptide repeat chr05_pseudomolecu... 74 2e-13
IMGA|Medtr3g080290.1 Pentatricopeptide repeat chr03_pseudomolecu... 74 2e-13
IMGA|Medtr2g042470.1 Pentatricopeptide repeat chr02_pseudomolecu... 72 4e-13
IMGA|Medtr5g046630.1 Pentatricopeptide repeat chr05_pseudomolecu... 72 4e-13
IMGA|Medtr6g071080.1 Pentatricopeptide repeat chr06_pseudomolecu... 72 4e-13
IMGA|Medtr2g126170.1 Pentatricopeptide repeat chr02_pseudomolecu... 72 6e-13
IMGA|Medtr6g090190.1 Pentatricopeptide repeat chr06_pseudomolecu... 71 9e-13
IMGA|Medtr1g039940.1 Pentatricopeptide repeat chr01_pseudomolecu... 71 1e-12
IMGA|Medtr8g042960.1 Pentatricopeptide repeat chr08_pseudomolecu... 70 1e-12
IMGA|Medtr4g124590.1 Pentatricopeptide repeat chr04_pseudomolecu... 70 2e-12
IMGA|AC233659_7.1 Pentatricopeptide repeat AC233659.1 31198-2600... 70 2e-12
IMGA|Medtr3g157290.1 Pentatricopeptide repeat chr03_pseudomolecu... 70 2e-12
IMGA|Medtr2g018090.1 Pentatricopeptide repeat chr02_pseudomolecu... 69 4e-12
IMGA|Medtr5g043920.1 Pentatricopeptide repeat chr05_pseudomolecu... 69 4e-12
IMGA|Medtr4g024740.1 Pentatricopeptide repeat chr04_pseudomolecu... 69 4e-12
IMGA|AC233672_1.1 Pentatricopeptide repeat AC233672.2 5130-7951 ... 69 6e-12
IMGA|AC235674_18.1 Pentatricopeptide repeat AC235674.1 92108-906... 69 6e-12
IMGA|Medtr2g073980.1 Pentatricopeptide repeat chr02_pseudomolecu... 69 6e-12
IMGA|Medtr4g159670.1 Pentatricopeptide repeat chr04_pseudomolecu... 69 6e-12
IMGA|Medtr7g107370.1 Pentatricopeptide repeat chr07_pseudomolecu... 68 8e-12
IMGA|Medtr8g005650.1 Pentatricopeptide repeat chr08_pseudomolecu... 67 1e-11
IMGA|Medtr5g085050.1 Pentatricopeptide repeat chr05_pseudomolecu... 67 1e-11
IMGA|Medtr3g039890.1 Pentatricopeptide repeat chr03_pseudomolecu... 67 2e-11
IMGA|Medtr6g089020.1 Pentatricopeptide repeat chr06_pseudomolecu... 67 2e-11
IMGA|Medtr1g009410.1 Pentatricopeptide repeat chr01_pseudomolecu... 66 3e-11
IMGA|Medtr1g121960.1 Pentatricopeptide repeat chr01_pseudomolecu... 66 3e-11
IMGA|Medtr2g007140.1 Pentatricopeptide repeat chr02_pseudomolecu... 65 5e-11
IMGA|Medtr6g071090.1 Pentatricopeptide repeat chr06_pseudomolecu... 65 6e-11
IMGA|Medtr4g098380.1 Pentatricopeptide repeat chr04_pseudomolecu... 65 7e-11
IMGA|Medtr2g096690.1 Pentatricopeptide repeat chr02_pseudomolecu... 65 7e-11
IMGA|Medtr6g071420.1 Pentatricopeptide repeat chr06_pseudomolecu... 65 8e-11
IMGA|Medtr2g007110.1 Pentatricopeptide repeat chr02_pseudomolecu... 64 1e-10
IMGA|Medtr1g093600.1 Pentatricopeptide repeat chr01_pseudomolecu... 64 2e-10
IMGA|Medtr1g149390.1 Pentatricopeptide repeat chr01_pseudomolecu... 64 2e-10
IMGA|Medtr6g071100.1 Pentatricopeptide repeat chr06_pseudomolecu... 64 2e-10
IMGA|Medtr6g083760.1 Pentatricopeptide repeat chr06_pseudomolecu... 64 2e-10
IMGA|Medtr2g130030.1 Pentatricopeptide repeat chr02_pseudomolecu... 63 3e-10
IMGA|Medtr1g111790.1 Pentatricopeptide repeat chr01_pseudomolecu... 62 4e-10
IMGA|Medtr8g086440.1 Pentatricopeptide repeat chr08_pseudomolecu... 62 4e-10
IMGA|Medtr1g143490.1 Catalase chr01_pseudomolecule_IMGAG_V3 3168... 62 5e-10
IMGA|Medtr1g013010.1 Pentatricopeptide repeat chr01_pseudomolecu... 62 6e-10
IMGA|Medtr5g045430.1 Pentatricopeptide repeat chr05_pseudomolecu... 62 7e-10
IMGA|Medtr5g085100.1 Pentatricopeptide repeat chr05_pseudomolecu... 62 7e-10
IMGA|Medtr7g076510.1 Pentatricopeptide repeat chr07_pseudomolecu... 62 7e-10
IMGA|Medtr6g083650.1 Pentatricopeptide repeat chr06_pseudomolecu... 61 9e-10
IMGA|Medtr7g127410.1 Pentatricopeptide repeat chr07_pseudomolecu... 61 1e-09
IMGA|Medtr8g134160.1 Pentatricopeptide repeat chr08_pseudomolecu... 61 1e-09
IMGA|Medtr7g099950.1 Pentatricopeptide repeat chr07_pseudomolecu... 60 1e-09
IMGA|Medtr7g010840.1 Pentatricopeptide repeat chr07_pseudomolecu... 60 2e-09
IMGA|Medtr3g123920.1 Pentatricopeptide repeat chr03_pseudomolecu... 60 3e-09
IMGA|AC233668_46.1 Pentatricopeptide repeat AC233668.2 202076-20... 60 3e-09
IMGA|Medtr1g114590.1 Pentatricopeptide repeat chr01_pseudomolecu... 59 4e-09
IMGA|AC225528_8.1 Protein Rf1, mitochondrial precursor, related ... 59 4e-09
IMGA|Medtr2g127200.1 Pentatricopeptide repeat chr02_pseudomolecu... 59 6e-09
IMGA|Medtr1g009460.1 Pentatricopeptide repeat chr01_pseudomolecu... 58 9e-09
IMGA|Medtr6g005010.1 Pentatricopeptide repeat chr06_pseudomolecu... 57 1e-08
IMGA|Medtr3g026200.1 Pentatricopeptide repeat chr03_pseudomolecu... 57 1e-08
IMGA|Medtr3g009820.1 Pentatricopeptide repeat chr03_pseudomolecu... 57 1e-08
IMGA|Medtr7g026580.1 Pentatricopeptide repeat chr07_pseudomolecu... 57 2e-08
IMGA|Medtr5g096890.1 Pentatricopeptide repeat chr05_pseudomolecu... 57 2e-08
IMGA|Medtr3g136090.1 Pentatricopeptide repeat chr03_pseudomolecu... 56 3e-08
IMGA|Medtr1g121380.1 Pentatricopeptide repeat chr01_pseudomolecu... 56 3e-08
IMGA|Medtr1g121210.1 Pentatricopeptide repeat chr01_pseudomolecu... 56 3e-08
IMGA|Medtr7g015660.1 Pentatricopeptide repeat chr07_pseudomolecu... 56 4e-08
IMGA|Medtr7g080380.1 Pentatricopeptide repeat chr07_pseudomolecu... 56 4e-08
IMGA|Medtr8g145050.1 Pentatricopeptide repeat chr08_pseudomolecu... 55 5e-08
IMGA|Medtr6g090180.1 Pentatricopeptide repeat chr06_pseudomolecu... 55 5e-08
IMGA|Medtr1g106200.1 Pentatricopeptide repeat chr01_pseudomolecu... 55 9e-08
IMGA|Medtr5g096900.1 Pentatricopeptide repeat chr05_pseudomolecu... 55 1e-07
IMGA|Medtr1g137270.1 Pentatricopeptide repeat chr01_pseudomolecu... 54 1e-07
IMGA|Medtr7g015060.1 Pentatricopeptide repeat chr07_pseudomolecu... 54 1e-07
IMGA|Medtr4g080760.1 Pentatricopeptide repeat chr04_pseudomolecu... 53 2e-07
IMGA|Medtr3g071290.1 Pentatricopeptide repeat chr03_pseudomolecu... 53 3e-07
IMGA|Medtr5g104070.1 Pentatricopeptide repeat chr05_pseudomolecu... 53 3e-07
IMGA|Medtr7g009050.1 Pentatricopeptide repeat chr07_pseudomolecu... 52 4e-07
IMGA|Medtr4g111010.1 Pentatricopeptide repeat chr04_pseudomolecu... 52 5e-07
IMGA|Medtr5g095600.1 Pentatricopeptide repeat chr05_pseudomolecu... 52 6e-07
IMGA|Medtr1g114450.1 Pentatricopeptide repeat chr01_pseudomolecu... 52 6e-07
IMGA|Medtr1g071440.1 Pentatricopeptide repeat chr01_pseudomolecu... 52 7e-07
IMGA|Medtr5g035080.1 hypothetical protein chr05_pseudomolecule_I... 51 1e-06
IMGA|Medtr5g102460.1 hypothetical protein chr05_pseudomolecule_I... 50 2e-06
IMGA|Medtr4g158880.1 Pentatricopeptide repeat chr04_pseudomolecu... 50 2e-06
IMGA|Medtr1g114540.1 Pentatricopeptide repeat chr01_pseudomolecu... 50 2e-06
IMGA|Medtr2g022350.1 Pentatricopeptide repeat chr02_pseudomolecu... 50 2e-06
IMGA|Medtr7g077520.1 Pentatricopeptide repeat chr07_pseudomolecu... 49 5e-06
IMGA|Medtr5g019730.1 Pentatricopeptide repeat chr05_pseudomolecu... 49 6e-06
IMGA|Medtr7g117850.1 Sugar transporter superfamily chr07_pseudom... 49 6e-06
>IMGA|Medtr1g143520.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 31704431-31701066 E
EGN_Mt090430 20090702
Length = 524
Score = 627 bits (1617), Expect = e-180, Method: Compositional matrix adjust.
Identities = 294/429 (68%), Positives = 353/429 (82%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR GV PD+LT+PFL KASA L K++ G+++H I K G+ESDRF+ NSLIHMY+S +
Sbjct: 79 MLRHGVAPDYLTYPFLVKASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGN 138
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A KVF+ + KNLVSWNSMLDGYAKCG+++MA++VF+ M E+DV SWS IDGYV+
Sbjct: 139 IMWAHKVFESMQGKNLVSWNSMLDGYAKCGEMAMAQKVFESMQERDVRSWSSFIDGYVKA 198
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+Y EA+AVFE+MR GPK NEVTMVSVL ACAHLGAL KGRMMH Y+IDN LP+T+VL+
Sbjct: 199 GEYREAMAVFEKMRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQ 258
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLVDMYAKCGAI+EAL VFR +DVFIWN+MIGG A HGLV+ESL LF EM + G
Sbjct: 259 TSLVDMYAKCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVEESLKLFKEMQMAG 318
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
++ DEITYL LL+ACAHGGLVKEAW FF+ L K GMTP SEHYACMVDV+ARAGQ+ AY
Sbjct: 319 IRSDEITYLCLLAACAHGGLVKEAWNFFESLVKRGMTPTSEHYACMVDVLARAGQLTTAY 378
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
QF+CQIPI+PTASMLGA+ +GC+NH DLAETVGRKLIEL+P+ DGRY+GLSNVYA+ +
Sbjct: 379 QFICQIPIEPTASMLGAIFSGCINHRNFDLAETVGRKLIELDPNNDGRYIGLSNVYAVVK 438
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
RWD ++SMREAMER GVKKSPG+SFVE+ HRF+AHDK+HP S++ Y ML F+V QMK
Sbjct: 439 RWDDSKSMREAMERRGVKKSPGFSFVEISEIHHRFIAHDKTHPDSDETYSMLHFVVCQMK 498
Query: 421 HIVDYENQE 429
H +NQE
Sbjct: 499 HGCPQDNQE 507
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 131/279 (46%), Gaps = 19/279 (6%)
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLID 115
DI + +VF I + SWN ++ GY+ + + +F M D L++ L+
Sbjct: 37 DIDYSYRVFSQISSPTIFSWNIIIRGYSNSKNPIHSLSIFLKMLRHGVAPDYLTYPFLVK 96
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
R ++V ++ +G + + S++ A G + M H V ++
Sbjct: 97 ASARLSKQKSGVSVHAQIIKTGHESDRFIQNSLIHMYASCGNI----MWAHKVFESMQGK 152
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
LV S++D YAKCG + A VF S M+ DV W+S I G+ G +E++ +F +
Sbjct: 153 NLVSWNSMLDGYAKCGEMAMAQKVFES--MQERDVRSWSSFIDGYVKAGEYREAMAVFEK 210
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEA----WYFFDCLGKNGMTPKSEHYACMVDVMA 291
M VG K +E+T +++LSACAH G +++ Y D L M ++ +VD+ A
Sbjct: 211 MRAVGPKANEVTMVSVLSACAHLGALQKGRMMHQYIIDNLLPMTMVLQTS----LVDMYA 266
Query: 292 RAGQVAEA-YQFLCQIPIQPTASMLGALLNGCMNHGKLD 329
+ G + EA + F Q + A++ G HG ++
Sbjct: 267 KCGAIEEALFVFRGISKSQTDVFIWNAMIGGLATHGLVE 305
>IMGA|Medtr5g020540.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 7774114-7772558 E
EGN_Mt090430 20090702
Length = 518
Score = 347 bits (891), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 168/419 (40%), Positives = 266/419 (63%), Gaps = 3/419 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + + TFPFL KA + L IH I K G+ S+ + +NSL+ +Y+
Sbjct: 102 MLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYATNSLLRVYAISGS 161
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A +FD +P +++VSWN+M+DGY KCG++ MA ++F MPE++V+SW+ +I G+VR
Sbjct: 162 IKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQAMPEKNVISWTSMIVGFVRT 221
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + EAL + ++M V+G KP+++T+ L ACA LGAL++G+ +H Y+ N++ + VL
Sbjct: 222 GMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHTYIGKNKIKIDPVLG 281
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KCG +++AL VF ++ V+ W ++IGGFA HG E+LD F++M G
Sbjct: 282 CALIDMYVKCGEMKKALLVFSK--LEKKCVYTWTAIIGGFAVHGKGSEALDWFTQMQKAG 339
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
+KP T+ +L+AC+H GLV+E F+ + M P EHY CMVD++ RAG + EA
Sbjct: 340 IKPTSFTFTAVLTACSHTGLVEEGKSLFESMSTFYNMKPVMEHYGCMVDLLGRAGFLKEA 399
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+F+ +PI+P A++ G+LLN C H L+L + +G+ LIEL+P DGRY+ L++++A
Sbjct: 400 KEFVESMPIKPNAAIWGSLLNACHLHKHLELGKEIGKFLIELDPEHDGRYIHLASIHAAA 459
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
WD+A +R ++ G+ PG S + ++G H F A + HP ++Y M I S+
Sbjct: 460 GEWDEASQVRSHIKNKGLLNLPGCSTITLNGVAHEFFAGAEPHPHVREMYDMSNLIASR 518
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 135/298 (45%), Gaps = 5/298 (1%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSS--FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKC 89
IHG + K G + + L+ Y+S F ++ AR VFD I N V WN+M+ Y+
Sbjct: 30 IHGQLLKKGTIRHKLTVSRLLTTYASMEFSNLTYARMVFDRISSPNTVMWNTMIRAYSNS 89
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
D A ++ M + + ++ ALA ++ V K + V
Sbjct: 90 NDPEEALLLYHQMLHHSIPHNAYTFPFLLKACSALSALAETHQIHVQIIKRGFGSEVYAT 149
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
+ + A+ H + D +V +++D Y KCG ++ A +F++ M +
Sbjct: 150 NSLLRVYAISGSIKSAHVLFDLLPSRDIVSWNTMIDGYIKCGNVEMAYKIFQA--MPEKN 207
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V W SMI GF G+ KE+L L +M + G+KPD+IT LSACA G +++ +
Sbjct: 208 VISWTSMIVGFVRTGMHKEALCLLQQMLVAGIKPDKITLSCSLSACAGLGALEQGKWIHT 267
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+GKN + ++D+ + G++ +A ++ + A++ G HGK
Sbjct: 268 YIGKNKIKIDPVLGCALIDMYVKCGEMKKALLVFSKLE-KKCVYTWTAIIGGFAVHGK 324
>IMGA|Medtr3g069190.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 16524184-16521746 H
EGN_Mt090430 20090702
Length = 812
Score = 335 bits (860), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 167/404 (41%), Positives = 258/404 (63%), Gaps = 5/404 (1%)
Query: 20 SAC--LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
SAC L +G ++HG K G + + N+LIH+YS+ +I +A+K+F G + +LV
Sbjct: 316 SACTSLSAVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLV 375
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
SWNSM+ GY CG + A+++FD M E+DV+SWS +I GY + G + EA+A+F+EM++ G
Sbjct: 376 SWNSMISGYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLG 435
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
+P+E +VSV+ AC H+ ALD G+ +H Y+ NE + ++L T+LVDMY KCG ++ AL
Sbjct: 436 IRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENAL 495
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
VF + M+ V WN++I G A +GLV++SL++F++M P+EIT++ +L AC H
Sbjct: 496 EVFYA--MEEKGVSTWNALILGLAMNGLVEKSLNVFADMKKTKTLPNEITFMGVLGACRH 553
Query: 258 GGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
GLV E +F + + + + P +HY CMVD++ RAG + EA + + +P+ P + G
Sbjct: 554 MGLVDEGRRYFSSMTQEHKIEPNVKHYGCMVDLLGRAGLLKEAEELIESMPMAPDVATWG 613
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
ALL C H ++ E +GRKLI+L+P DG +V LSN+YA W +R M + G
Sbjct: 614 ALLGACRKHHNNEMGERLGRKLIQLQPDHDGFHVLLSNIYASKGNWGDVLEIRGIMAQHG 673
Query: 377 VKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
V K PG S +E +G +H F+A DK+HP + I ML + +++K
Sbjct: 674 VVKMPGCSMIEANGIVHEFLAGDKTHPQIKDIEHMLNEVAAKLK 717
Score = 160 bits (405), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 177/378 (46%), Gaps = 64/378 (16%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PDH T+P L ++ + G IH ++ K G++SD +V N+LI++Y+ ++ +A KV
Sbjct: 143 PDHYTYPILLRSCTARVSEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKV 202
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGD-------------------------------ISMAR 96
F V +LVSWN++L GY GD I+ AR
Sbjct: 203 FKESVVLDLVSWNTLLAGYVNLGDVVEAECVYDKMPVRNTIASNSMIVLFGKEGCIAKAR 262
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
+FD + +D++SWS +I Y + G +EAL +F +M +G +EV +VS + AC L
Sbjct: 263 SLFDRIEGKDMVSWSAMISCYEQNGMCEEALVLFVDMNANGVMVDEVVVVSAISACTSLS 322
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL------------ 204
A+ GR +H + + L+ +L+ +Y+ CG I +A +F G+
Sbjct: 323 AVRMGRSVHGLAAKIGIQDYVSLQNALIHLYSNCGEILDAQKIFSGGVLLDLVSWNSMIS 382
Query: 205 -----------------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
M DV W++MI G+A HG E++ LF EM ++G++PDE
Sbjct: 383 GYLMCGYVEDAKKLFDSMVEKDVVSWSAMISGYAQHGCFSEAVALFQEMQLLGIRPDETA 442
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++++SAC H + + + KN +VD+ + G V A + +
Sbjct: 443 IVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGCVENALEVFYAME 502
Query: 308 IQPTAS----MLGALLNG 321
+ ++ +LG +NG
Sbjct: 503 EKGVSTWNALILGLAMNG 520
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 102/224 (45%), Gaps = 33/224 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ PD + A + +LG IH YI+K + + + +L+ MY
Sbjct: 431 MQLLGIRPDETAIVSVISACTHMAALDLGKWIHAYISKNEFNVNVILGTTLVDMYMKCGC 490
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NA +VF + K + +WN+++ G A ++G V K
Sbjct: 491 VENALEVFYAMEEKGVSTWNALILGLA--------------------------MNGLVEK 524
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTLVL 179
+L VF +M+ + PNE+T + VL AC H+G +D+GR + ++++ +
Sbjct: 525 -----SLNVFADMKKTKTLPNEITFMGVLGACRHMGLVDEGRRYFSSMTQEHKIEPNVKH 579
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+VD+ + G ++EA + S M P DV W +++G H
Sbjct: 580 YGCMVDLLGRAGLLKEAEELIESMPMAP-DVATWGALLGACRKH 622
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/249 (18%), Positives = 105/249 (42%), Gaps = 38/249 (15%)
Query: 39 AGYESDRFVSNSLIHM--YSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMAR 96
GY +D + ++ L++ +S+F + K+F+ + N WN+++ + + +
Sbjct: 70 TGYITDTYAASRLVNFSTHSNFIPFQYSLKIFNHLHNPNTFIWNTIMRSHLELHN----- 124
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
P+Q AL ++ P+ T +L +C
Sbjct: 125 -----SPQQ--------------------ALNFYKLFLFQNTSPDHYTYPILLRSCTARV 159
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
+ +G+ +H +V+ + +R +L+++YA CG + A VF+ ++ D+ WN++
Sbjct: 160 SEPEGKQIHDHVVKFGFDSDVYVRNTLINLYAVCGNMVSAHKVFKESVVL--DLVSWNTL 217
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
+ G+ G V E+ ++ +M + + I +++ G + +A FD + M
Sbjct: 218 LAGYVNLGDVVEAECVYDKMPV----RNTIASNSMIVLFGKEGCIAKARSLFDRIEGKDM 273
Query: 277 TPKSEHYAC 285
S +C
Sbjct: 274 VSWSAMISC 282
>IMGA|Medtr3g132780.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 33470928-33474688 H
EGN_Mt090430 20090702
Length = 628
Score = 331 bits (848), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 265/418 (63%), Gaps = 4/418 (0%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
VFPD TFPF+ K+ +L LG+ +HG + K G + N+LI MY+ F D+ NA
Sbjct: 106 SVFPDKFTFPFVIKSCTGILCHRLGMQVHGLVYKFGADFHCITENALIDMYTKFGDLTNA 165
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KVF+ + ++++SWNS++ GY K G ++ AR++FD MP + ++SW+ +I GY R G Y
Sbjct: 166 CKVFEEMSHRDVISWNSLIFGYVKLGQMNSARELFDDMPVRTIVSWTTMITGYGRMGCYG 225
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL VF EM++ G +P+E+++++VL ACA LGAL+ G+ +H Y N + +L+
Sbjct: 226 DALDVFREMQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALI 285
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MYAKCG I EA ++F + K DV W++MIGG A HG E++ LF EM V V P+
Sbjct: 286 EMYAKCGCIDEAWNLFDQLVEK--DVISWSTMIGGLANHGKGYEAIQLFEEMCKVRVAPN 343
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
EIT+L +L AC+H GL E +FD + + + P+ EHY C++D++ R+G + +A +
Sbjct: 344 EITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIEHYGCLIDLLGRSGCLGQALDTI 403
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
++PI+P + + +LL+ C H L +A ++L+ELEP + G YV L+N+YA +W+
Sbjct: 404 SKMPIKPDSRIWNSLLSSCRIHRNLQIAVIAVKQLMELEPEESGNYVLLANMYAEHGKWE 463
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML-GFIVSQMK 420
++R+ + +KK+PG S +E++ + FV+ D S P S++++ +L G ++Q +
Sbjct: 464 DVSNIRKLIRNKRIKKTPGSSSIEVNNVVQEFVSSDDSKPFSQEVFWILEGLALNQTR 521
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 101/228 (44%), Gaps = 41/228 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M VG+ PD ++ + A A L E+G IH Y K G+ + N+LI MY+
Sbjct: 234 MQMVGIEPDEISIIAVLPACAQLGALEVGKWIHMYADKNGFLRKTGICNALIEMYAKCGC 293
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A +FD + K+++SW++M+ G A G GY
Sbjct: 294 IDEAWNLFDQLVEKDVISWSTMIGGLANHG------------------------KGY--- 326
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPL 175
EA+ +FEEM PNE+T + VL AC+H G D+G M Y I+ E+
Sbjct: 327 ----EAIQLFEEMCKVRVAPNEITFLGVLLACSHTGLWDEGLKYFDVMSASYHIEPEIE- 381
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
L+D+ + G + +AL +KP D IWNS++ H
Sbjct: 382 ---HYGCLIDLLGRSGCLGQALDTISKMPIKP-DSRIWNSLLSSCRIH 425
>IMGA|AC234702_5.1 Pentatricopeptide repeat AC234702.1 42306-44804 E
EGN_Mt090430 20090702
Length = 702
Score = 326 bits (836), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 162/413 (39%), Positives = 249/413 (60%), Gaps = 4/413 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ +T + A + + E+G +H + + + N+L+ MY
Sbjct: 236 MLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDC 295
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +AR++FD + K++ SW SM++GYAKCGD+ AR+ FD P ++ + WS +I GY +
Sbjct: 296 LVDARELFDRMATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKNAVCWSAMIAGYSQN 355
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY-VIDNELPLTLVL 179
E+L +F EM G P E T+VSVL AC L L+ G +H Y V+ +PL++ L
Sbjct: 356 NKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQYFVVGKIIPLSVTL 415
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++VDMYAKCG+I A VF + M ++ WN+MI G+A +G K+++++F +M +
Sbjct: 416 ENAIVDMYAKCGSIDAATEVFST--MPERNLISWNTMIAGYAANGRAKQAINVFDQMRNM 473
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAE 298
G +P+ IT+++LL+AC+HGGL+ E +FD + K G+ P+ HYACMVD++ R G + E
Sbjct: 474 GFEPNNITFVSLLTACSHGGLISEGREYFDNMERKYGIKPERGHYACMVDLLGRTGLLEE 533
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
AY+ + +P+QP + GALLN C HG ++LA L+ L+P G YV L+N A
Sbjct: 534 AYKLIANMPMQPCEAAWGALLNACRMHGNVELARLSAHNLLRLDPEDSGIYVLLANTCAN 593
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMM 411
R+W R +R M+ GVKK PGYS +E+ G F+ D+SHP SE+IY +
Sbjct: 594 DRKWSDVRRVRSLMKDKGVKKIPGYSLIEIDGGFVEFLVADESHPQSEEIYKL 646
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 150/339 (44%), Gaps = 65/339 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++ V D +F F KA G +++ + K G++ + V N LIH Y
Sbjct: 135 MFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELLVRNGLIHFY----- 189
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ G + ARQVFD ++DV++W+ +IDGY
Sbjct: 190 --------------------------AERGLLKNARQVFDESSDKDVVTWTTMIDGYAAH 223
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+EA+ VFE M +S +PNEVT+++V+ AC+ +G L+ G+ +H V + + +L L
Sbjct: 224 DCSEEAMEVFELMLLSHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLH 283
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV-------------- 226
+L+DMY KC + +A +F M DV+ W SM+ G+A G +
Sbjct: 284 NALLDMYVKCDCLVDARELFDR--MATKDVYSWTSMVNGYAKCGDLESARRFFDQTPRKN 341
Query: 227 -----------------KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
KESL LF EM GV P E T +++LSAC + +
Sbjct: 342 AVCWSAMIAGYSQNNKPKESLKLFHEMMERGVVPIEHTLVSVLSACGQLTCLNLGDWIHQ 401
Query: 270 CLGKNGMTPKSEHYA-CMVDVMARAGQVAEAYQFLCQIP 307
+ P S +VD+ A+ G + A + +P
Sbjct: 402 YFVVGKIIPLSVTLENAIVDMYAKCGSIDAATEVFSTMP 440
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/320 (22%), Positives = 144/320 (45%), Gaps = 22/320 (6%)
Query: 64 ARKVFDGI-----PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
AR GI PV ++++ ++ A GD+ A +F+ + + + W+ +I GY
Sbjct: 65 ARMTLTGIITHAFPVSRVIAFCAL----AHSGDLHYAHTIFNRVEQPNTFMWNTMIRGYQ 120
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
A + F M + + + V L AC + +G ++ V L+
Sbjct: 121 NARKPIFAFSFFVYMFQLRVEMDSRSFVFALKACQQFETVFEGESVYCVVWKMGFDCELL 180
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+R L+ YA+ G ++ A VF K DV W +MI G+A H +E++++F M +
Sbjct: 181 VRNGLIHFYAERGLLKNARQVFDESSDK--DVVTWTTMIDGYAAHDCSEEAMEVFELMLL 238
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
V+P+E+T + ++SAC+ G ++ + + + M + ++D+ + + +
Sbjct: 239 SHVEPNEVTLIAVVSACSDMGNLEMGKRVHEKVEEKNMRCSLSLHNALLDMYVKCDCLVD 298
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + ++ + S +++NG G L+ A R+ + P ++ V S + A
Sbjct: 299 ARELFDRMATKDVYSWT-SMVNGYAKCGDLESA----RRFFDQTPRKNA--VCWSAMIAG 351
Query: 359 FRRWDKARS----MREAMER 374
+ + +K + E MER
Sbjct: 352 YSQNNKPKESLKLFHEMMER 371
>IMGA|Medtr4g005700.1 Asp/Glu racemase chr04_pseudomolecule_IMGAG_V3
385459-387693 H EGN_Mt090430 20090702
Length = 744
Score = 322 bits (824), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 249/409 (60%), Gaps = 4/409 (0%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHG-YITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
V P+ +T + A + L G I+ YI + E + + N+LI M++S ++ A
Sbjct: 235 VSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPNLILENALIDMFASCGEMDAA 294
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R VFD + ++++SW S++ G+A I +AR+ FD MPE+D +SW+ +IDGY+R +
Sbjct: 295 RGVFDEMKTRDVISWTSIVTGFANTCRIDLARKYFDQMPERDYVSWTAMIDGYLRMNRFK 354
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E L +F +M++S KP+E TMVS+L ACAHLGAL+ G Y+ N++ + +L+
Sbjct: 355 EVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGEWAKTYIDKNKIKNDTFIGNALI 414
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMY KCG +++A +F M+ D F W +MI G A +G +E+L +FS M V PD
Sbjct: 415 DMYFKCGNVEKAKKIFNE--MQKKDKFTWTAMIVGLANNGHGEEALTMFSYMLEASVTPD 472
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
EITY+ ++ AC H GLV + +FF + ++G+ P HY CMVD++ RAG + EA + +
Sbjct: 473 EITYIGVMCACTHVGLVAKGKHFFSNMAVQHGIKPNLTHYGCMVDLLGRAGHLKEALEVI 532
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P++P + + G+LL C H + LAE +++ELEP YV L N+YA ++W
Sbjct: 533 MNMPVKPNSIVWGSLLGACRVHKNVQLAEMAANEILELEPENGAVYVLLCNIYAACKKWK 592
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
++R+ M G+KK PG S +EM+G ++ FVA DKSHP S++IY L
Sbjct: 593 NLHNVRKMMMERGIKKIPGCSLMEMNGIVYEFVAGDKSHPQSKEIYAKL 641
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 169/388 (43%), Gaps = 70/388 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFR 59
ML + PD TFPFL K + + G + + G+ +S+ FV IH++S
Sbjct: 126 MLVHNIKPDGFTFPFLLKGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCG 185
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ ARK+FD +V+WN +L GY R
Sbjct: 186 LVNYARKIFDMGDGWEVVTWNVVLSGYN-------------------------------R 214
Query: 120 KGDYDEALAVFEEM--RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH-YVIDNELPLT 176
Y+E+ +F EM + PN VT+V +L AC+ L L G+ +++ Y+ + +
Sbjct: 215 FKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKCIYNKYIKEGIVEPN 274
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA--CH----------- 223
L+L +L+DM+A CG + A VF MK DV W S++ GFA C
Sbjct: 275 LILENALIDMFASCGEMDAARGVFDE--MKTRDVISWTSIVTGFANTCRIDLARKYFDQM 332
Query: 224 ------------------GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
KE L LF +M + VKPDE T +++L+ACAH G ++
Sbjct: 333 PERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVKPDEFTMVSILTACAHLGALELGE 392
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
+ + KN + + ++D+ + G V +A + ++ + + A++ G N+
Sbjct: 393 WAKTYIDKNKIKNDTFIGNALIDMYFKCGNVEKAKKIFNEMQKKDKFT-WTAMIVGLANN 451
Query: 326 GKLDLAETVGRKLIELEPHQDG-RYVGL 352
G + A T+ ++E D Y+G+
Sbjct: 452 GHGEEALTMFSYMLEASVTPDEITYIGV 479
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 135/294 (45%), Gaps = 12/294 (4%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD+ AR+VFD +P+ V W+ +I GY R + +++++ M V KP+ T +L
Sbjct: 83 GDVYYARKVFDEIPQPSVFIWNTMIKGYSRINCSESGVSLYKLMLVHNIKPDGFTFPFLL 142
Query: 150 CACAHLGALDKGR-MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
AL G+ +++H VI L L ++ + +++ CG + A +F G
Sbjct: 143 KGFTKDMALKYGKVLLNHAVIHGFLDSNLFVQKGFIHLFSLCGLVNYARKIFDMG--DGW 200
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMH--IVGVKPDEITYLNLLSACAH-GGLVKEAW 265
+V WN ++ G+ +ES LF EM V P+ +T + +LSAC+ LV
Sbjct: 201 EVVTWNVVLSGYNRFKRYEESKRLFIEMEKKCECVSPNSVTLVLMLSACSKLKDLVGGKC 260
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
+ + + + P ++D+ A G++ A ++ + S +++ G N
Sbjct: 261 IYNKYIKEGIVEPNLILENALIDMFASCGEMDAARGVFDEMKTRDVIS-WTSIVTGFANT 319
Query: 326 GKLDLAETVGRKLIELEPHQD-GRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
++DLA RK + P +D + + + Y R+ + ++ M+ VK
Sbjct: 320 CRIDLA----RKYFDQMPERDYVSWTAMIDGYLRMNRFKEVLTLFRDMQMSNVK 369
>IMGA|Medtr6g069810.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 13009873-13018493 H
EGN_Mt090430 20090702
Length = 983
Score = 320 bits (821), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 161/418 (38%), Positives = 260/418 (62%), Gaps = 3/418 (0%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G FP+ +F F A + G + + K G + + FV N+LI M+ + + +A
Sbjct: 106 GYFPNRYSFVFAFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDA 165
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R VFD ++ SWN+M+ Y G++ +A+++FD M E+DV+SWS +I GYV+ G +
Sbjct: 166 RNVFDSAVDRDFYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFM 225
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL F +M S KPNE TMVS L AC++L ALD+G+ +H Y+ + + + L SL+
Sbjct: 226 EALDFFHKMLQSEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLI 285
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG I A VF +K V+ WN+MIGGFA HG +E++++F +M + V P+
Sbjct: 286 DMYAKCGEIDSASSVFHEHKVK-RKVWPWNAMIGGFAMHGKPEEAINVFEKMKVEKVSPN 344
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++T++ LL+AC+HG +VKE +F+ + + G+ P+ EHY CMVD+++R+G + ++ + +
Sbjct: 345 KVTFIALLNACSHGYMVKEGKSYFELMASDYGINPEIEHYGCMVDLLSRSGHLKDSEEMI 404
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P+ P ++ GALLN C + ++ +GR + E++P+ G V L N+Y+ RW+
Sbjct: 405 LSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYSTSGRWN 464
Query: 364 KARSMREAME-RMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+AR +RE E KK PG+S +E++G H F+ D+SHP S +IY L ++S++K
Sbjct: 465 EARMVREKNEINSDRKKIPGFSSIELNGVFHEFLVGDRSHPQSREIYSFLDEMISKLK 522
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 61/280 (21%), Positives = 126/280 (45%), Gaps = 31/280 (11%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGY-VRKGDYDEALAVFEEM-RVSGPKPNEVTMVS 147
++ A ++FD +P+ D+ ++ +I + + Y +++AVF + R SG PN + V
Sbjct: 57 ASLTYAHKLFDQIPQPDLFIYNTMIKSHSMSPHSYLDSIAVFRSLIRDSGYFPNRYSFVF 116
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL--- 204
AC + + +G + + + L + + +L+ M+ K G +++A +VF S +
Sbjct: 117 AFGACGNGMCVREGEQVFTHAVKVGLDGNVFVVNALIGMFGKWGRVEDARNVFDSAVDRD 176
Query: 205 --------------------------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
M DV W+++I G+ G E+LD F +M
Sbjct: 177 FYSWNTMIGAYVGSGNMVLAKELFDEMHERDVVSWSTIIAGYVQVGCFMEALDFFHKMLQ 236
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
VKP+E T ++ L+AC++ + + + + ++ + A ++D+ A+ G++
Sbjct: 237 SEVKPNEYTMVSALAACSNLVALDQGKWIHVYIRRDNIKMNDRLLASLIDMYAKCGEIDS 296
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
A + ++ A++ G HGK + A V K+
Sbjct: 297 ASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAINVFEKM 336
>IMGA|Medtr8g029460.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 6512144-6515146 H
EGN_Mt090430 20090702
Length = 506
Score = 317 bits (813), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 161/428 (37%), Positives = 253/428 (59%), Gaps = 7/428 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ TF FL L LG IH K+G++ D F S +L+ MY+ + AR V
Sbjct: 77 PNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALLDMYAKLGCLKFARNV 136
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + VK L +WN+M+ G + GD+ A ++F LMP ++V+SW+ ++ GY++ Y++AL
Sbjct: 137 FDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTTMVSGYLQNKQYEKAL 196
Query: 128 AVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+F M R PNEVT+ SVL ACA+LGAL+ G+ + Y N L + ++++M
Sbjct: 197 GLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKNGFLSNLFVCNAVLEM 256
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAKCG I A VF + + ++ WNSMI G A HG +++ L+ +M G PD++
Sbjct: 257 YAKCGKIDVAWKVFDE-IGRFRNLCSWNSMIMGLAVHGQCHKAIQLYDQMLREGTLPDDV 315
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
T++ LL AC HGG+V++ + F + ++ + PK EHY CMVD++ RAG++ EAY+ + +
Sbjct: 316 TFVGLLLACTHGGMVEKGKHVFQSMTRDFNIIPKLEHYGCMVDLLGRAGRLTEAYEVIKR 375
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+P++P + + G LL C HG ++LAE L LEP G YV LSN+YA +WD
Sbjct: 376 MPMKPDSVIWGTLLGACSFHGNVELAEVAAESLFVLEPWNPGNYVILSNIYASAGKWDGV 435
Query: 366 RSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDY 425
+R+ M+ + K+ G SF+E G LH+F+ D+SH S +I+ +L + +K +
Sbjct: 436 AKLRKVMKGSKITKTAGQSFIEEGGQLHKFIVEDRSHSESSEIFALLNGVYEMIK----F 491
Query: 426 ENQEYYFY 433
+ EY ++
Sbjct: 492 DKNEYEWH 499
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 113/261 (43%), Gaps = 35/261 (13%)
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ ++ +M + G PN+ T + C L +L G+M+H + + + T+L+
Sbjct: 62 QCFTLYSQMYLHGHSPNQYTFNFLFTTCTSLSSLSLGQMIHTQFMKSGFKHDVFASTALL 121
Query: 185 DMYAKCGAIQEALHVF-------------------RSG----------LMKPSDVFIWNS 215
DMYAK G ++ A +VF R G LM +V W +
Sbjct: 122 DMYAKLGCLKFARNVFDEMSVKELATWNAMMAGCTRFGDMERALELFWLMPSRNVVSWTT 181
Query: 216 MIGGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
M+ G+ + +++L LF M V P+E+T ++L ACA+ G ++ KN
Sbjct: 182 MVSGYLQNKQYEKALGLFMRMEREKDVSPNEVTLASVLPACANLGALEIGQRVEVYARKN 241
Query: 275 GMTPKSEHYAC--MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA- 331
G S + C ++++ A+ G++ A++ +I +++ G HG+ A
Sbjct: 242 GFL--SNLFVCNAVLEMYAKCGKIDVAWKVFDEIGRFRNLCSWNSMIMGLAVHGQCHKAI 299
Query: 332 ETVGRKLIELEPHQDGRYVGL 352
+ + L E D +VGL
Sbjct: 300 QLYDQMLREGTLPDDVTFVGL 320
>IMGA|Medtr7g032150.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 7901507-7903132 H
EGN_Mt090430 20090702
Length = 541
Score = 316 bits (809), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 162/402 (40%), Positives = 253/402 (62%), Gaps = 9/402 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACL-LKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
ML G+ P++LTFPFL K + L +G IH ++ K G+ +D FV NSLI ++ +F
Sbjct: 119 MLNKGIVPNNLTFPFLVKGCSRLQYGGTVGEVIHAHVLKFGFLNDVFVGNSLISLFMNFG 178
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
NARKVFD + V+++VSWNSM+ GY + G++ MA +F M +++++W+ +I G V+
Sbjct: 179 LSKNARKVFDEMFVRDVVSWNSMVVGYLRNGEVEMALNLFRKMNGRNIITWNSIITGLVQ 238
Query: 120 KGDYDEALAVFEEMR-VSGP---KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
G E+L +F EM+ +SG KP+++T+ SVL ACA LG++D G+ +H Y+ N++
Sbjct: 239 AGHAKESLEIFHEMQFLSGDDVVKPDKITIASVLSACALLGSIDHGKWVHAYLRKNDIEC 298
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+V+ T+LV+MY KCG +Q+A+ +F M D W +MI FA HG K++ D F E
Sbjct: 299 DVVIGTALVNMYGKCGDVQQAIEIFND--MPEKDASAWTAMISVFALHGFGKKAFDCFLE 356
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAG 294
M GVKP+ +T++ LLSAC+H GLV++ FD + + + P+ HYACMVD+++RA
Sbjct: 357 MEKAGVKPNHVTFVGLLSACSHSGLVEQGRCCFDVMKRVYSIEPQIYHYACMVDILSRAR 416
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
EA + +P++P + GALL GC HG + L E V LI+LEPH Y+ L +
Sbjct: 417 LFDEALFLIRSMPMKPDVYVWGALLGGCQMHGNIKLGEKVAHYLIDLEPHNHAFYINLCD 476
Query: 355 VYAIFRRWDKARSMREAMERMGVK-KSPGYSFVEMHGALHRF 395
+Y ++D A+ +R +M+ G++ K PG S +E++G + F
Sbjct: 477 IYVKAGKYDAAKRIRNSMKERGIETKIPGCSIIEINGVVQEF 518
>IMGA|Medtr5g046620.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 19613430-19615007 E
EGN_Mt090430 20090702
Length = 525
Score = 314 bits (805), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 177/420 (42%), Positives = 250/420 (59%), Gaps = 11/420 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ + PD+ T P++ KA G IHGY +K G D +V NSL+ MY F D
Sbjct: 98 MLQSELKPDNYTIPYVLKACGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGD 157
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR VFD IP N+VSW+ M+ GYAK GD+ AR FD PE+D W +I GYV+
Sbjct: 158 VVAARYVFDEIPSLNVVSWSVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQN 217
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLTLVL 179
+ E+L +F M+++ P+E VS+L ACAHLGAL+ G +H ++ +L PL++ L
Sbjct: 218 SCFKESLYLFRLMQLTDIVPDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRL 277
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
TSL+DMYAKCG ++ A +F S M DV WN+MI G A HG K +L LF +M V
Sbjct: 278 STSLLDMYAKCGNLELAKRLFDS--MNMRDVVCWNAMISGMAMHGDGKGALKLFYDMEKV 335
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFD--CLGKNGMTPKSEHYACMVDVMARAGQVA 297
GVKPD+IT++ + +AC++ G+ E D C N + PKSEHY C+VD+++RAG
Sbjct: 336 GVKPDDITFIAVFTACSYSGMAYEGLMLLDKMCSVYN-IVPKSEHYGCLVDLLSRAGLFE 394
Query: 298 EAYQFLCQIPIQPTAS----MLGALLNGCMNHGKLDLAETVGRKLIELEPH-QDGRYVGL 352
EA + +I S A L+ C NHG+ LAE K+++L+ H G YV L
Sbjct: 395 EAMVMIRKITNSWNGSEETLAWRAFLSACCNHGETQLAELAAEKVLQLDNHIHSGVYVLL 454
Query: 353 SNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
SN+YA + AR +R+ M+ G K+PG S VE+ G + F+A +K+HP E+I+ +L
Sbjct: 455 SNLYAASGKHSDARRVRDMMKIKGTNKAPGCSSVEIDGVISEFIAGEKTHPQMEEIHSVL 514
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 117/265 (44%), Gaps = 31/265 (11%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
++ A +VF+ + V ++ LI ++ + AL VF +M S KP+ T+ VL A
Sbjct: 57 LTYACRVFEQIQNPTVCIYNTLIKAFLVNNKFKSALQVFVKMLQSELKPDNYTIPYVLKA 116
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR---------- 201
C G+M+H Y L + + SL+ MY G + A +VF
Sbjct: 117 CGTFHDCSFGKMIHGYSSKLGLVFDIYVGNSLMAMYCVFGDVVAARYVFDEIPSLNVVSW 176
Query: 202 ----SGLMKPSDV---------------FIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
SG K DV IW +MI G+ + KESL LF M + +
Sbjct: 177 SVMISGYAKVGDVDSARLFFDEAPEKDKGIWGAMISGYVQNSCFKESLYLFRLMQLTDIV 236
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC-MVDVMARAGQVAEAYQ 301
PDE ++++LSACAH G ++ + L + + P S + ++D+ A+ G + A +
Sbjct: 237 PDESIFVSILSACAHLGALEIGVWIHQHLNQLKLVPLSVRLSTSLLDMYAKCGNLELAKR 296
Query: 302 FLCQIPIQPTASMLGALLNGCMNHG 326
+ ++ A+++G HG
Sbjct: 297 LFDSMNMRDVVC-WNAMISGMAMHG 320
>IMGA|Medtr5g018690.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 6830705-6833597 E
EGN_Mt090430 20090702
Length = 663
Score = 313 bits (801), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/421 (37%), Positives = 255/421 (60%), Gaps = 3/421 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M VG+ PD T L S +LG +H ++ G E D V+N+L+ MY+ +
Sbjct: 226 MQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGN 285
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ VFD + K++VSW M++ YA G I A + F+ MP ++V+SW+ +I +V++
Sbjct: 286 LKCAKSVFDQMLDKDVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSWNSIIWCHVQE 345
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y EA+ +F M SG N+ T+V++L +C+H+G L G+ H Y+ DN + L+ L
Sbjct: 346 GLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFDNNITLSATLC 405
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++DMYAKCGA+Q A+ VF M + WN +IG A HG KE++++F +M G
Sbjct: 406 NAIIDMYAKCGALQTAMDVFFG--MPEKNAVSWNVIIGALALHGYGKEAIEMFEKMQASG 463
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
V PDEIT+ LLSAC+H GLV ++F+ + G++P EHYACMVD++ R G + EA
Sbjct: 464 VCPDEITFTGLLSACSHSGLVDTGQHYFEIMNLTFGISPDVEHYACMVDLLGRRGLLGEA 523
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ ++P++P + ALL C +G L + + + ++L+EL + G YV LSN+Y+
Sbjct: 524 ISLIKKMPVKPDVVVWSALLGACRTYGNLAIGKQIMKQLLELGRYNSGLYVLLSNMYSES 583
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+RWD +++ + +++ G+KK SF+E+ G ++F+ DK H +S IY MLG ++ +
Sbjct: 584 QRWDDMKNIWKILDQNGIKKCRAISFIEIDGCCYQFMVDDKRHGASTSIYSMLGQLMDHL 643
Query: 420 K 420
K
Sbjct: 644 K 644
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 102/352 (28%), Positives = 161/352 (45%), Gaps = 75/352 (21%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ T PF+ KA A LG+ +H K G S V N+++++Y + I +A
Sbjct: 129 GILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNAILNIYVACGLITSA 188
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R+VFD I + LVSWNSM++GY+K G +
Sbjct: 189 RRVFDDISERTLVSWNSMINGYSK-------------------------------MGRSE 217
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA+ +F EM+ G +P+ T+V +L G D GR +H +++ + + ++ +L+
Sbjct: 218 EAVLMFREMQEVGLEPDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALM 277
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV------------------ 226
DMYAKCG ++ A VF L K DV W MI +A HGL+
Sbjct: 278 DMYAKCGNLKCAKSVFDQMLDK--DVVSWTCMINAYANHGLIDCALEFFNQMPGKNVVSW 335
Query: 227 -------------KESLDLFSEMHIVGVKPDEITYLNLLSACAHGG---LVKEA-WYFFD 269
E++DLF M GV ++ T + +LS+C+H G L K+A Y FD
Sbjct: 336 NSIIWCHVQEGLYAEAVDLFYRMCDSGVMANDTTLVAILSSCSHMGDLALGKQAHSYIFD 395
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS---MLGAL 318
N +T + ++D+ A+ G + A +P + S ++GAL
Sbjct: 396 ----NNITLSATLCNAIIDMYAKCGALQTAMDVFFGMPEKNAVSWNVIIGAL 443
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 4/269 (1%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A+ + G+ + +++ ++ + D+ A ++FD +P+ + ++ LI GY D
Sbjct: 56 HAQIILHGLATQ-VLTLGKLVSSSVQLRDLRYAHKLFDQIPQPNKFMFNHLIKGYSNSSD 114
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
++L ++ M G PN+ T+ VL ACA G +H + ++ +
Sbjct: 115 PIKSLLLYRRMVCDGILPNQFTIPFVLKACAAKSCYWLGVCVHAQSFKLGMGSHACVQNA 174
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
++++Y CG I A VF + + WNSMI G++ G +E++ +F EM VG++
Sbjct: 175 ILNIYVACGLITSARRVFDD--ISERTLVSWNSMINGYSKMGRSEEAVLMFREMQEVGLE 232
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
PD T + LLS G + + G+ S ++D+ A+ G + A
Sbjct: 233 PDVFTLVGLLSVSTKHGNFDLGRFVHLHMVVTGIEIDSIVTNALMDMYAKCGNLKCAKSV 292
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLA 331
Q+ + S ++N NHG +D A
Sbjct: 293 FDQMLDKDVVSW-TCMINAYANHGLIDCA 320
>IMGA|Medtr4g025960.1 N-6 Adenine-specific DNA methylase;
Methyltransferase small chr04_pseudomolecule_IMGAG_V3
6284258-6278446 H EGN_Mt090430 20090702
Length = 971
Score = 307 bits (787), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 245/392 (62%), Gaps = 3/392 (0%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ +T + + + + LG H YI + G E ++N+L+ MY ++ AR
Sbjct: 255 VRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTAR 314
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+FD + K LVSW +M+ GYA+ G + +AR++ +PE+ V+ W+ +I G V+ E
Sbjct: 315 VLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKE 374
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
ALA+F EM++ +P++VTMV+ L AC+ LGALD G +HHY+ ++L + + L T+LVD
Sbjct: 375 ALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVD 434
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAKCG I AL VF + + W ++I G A HG +++L FS+M +G+ PDE
Sbjct: 435 MYAKCGNIARALQVFEE--IPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDE 492
Query: 246 ITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
IT+L +LSAC HGGLV+E YF + K ++PK +HY+CMVD++ RAG + EA + +
Sbjct: 493 ITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVK 552
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+P+ A++LGAL C +G + + E KL+E++P G YV L+++Y+ + W +
Sbjct: 553 NMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKE 612
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFV 396
ARS R+ M GV+K+PG S VE++G +H FV
Sbjct: 613 ARSARKLMNDKGVEKTPGCSLVEINGIVHEFV 644
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 65/365 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ T+P L K LGL + G++ K G+E D FV N+ I M S ++ A V
Sbjct: 156 PDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDV 215
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F+ V++LV+WNSM I G V++G EA+
Sbjct: 216 FNKSRVRDLVTWNSM-------------------------------ITGCVKRGLAIEAI 244
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+++EM +PNE+TM+ ++ +C+ + L+ G+ H Y+ ++ L T+ L +L+DMY
Sbjct: 245 KIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMY 304
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV--------------------- 226
KCG + A +F + M + W +M+ G+A G +
Sbjct: 305 VKCGELLTARVLFDN--MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAI 362
Query: 227 ----------KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
KE+L LF EM I ++PD++T +N LSAC+ G + + + ++ +
Sbjct: 363 ISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKL 422
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGR 336
+ +VD+ A+ G +A A Q +IP Q A++ G HG A +
Sbjct: 423 SIDVALGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQDALSYFS 481
Query: 337 KLIEL 341
K+I +
Sbjct: 482 KMIHI 486
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 4/240 (1%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDK 160
+ E +V SW+ I GYV GD + +++ M + G KP+ T +L C +
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCL 176
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G + +V+ + + + + M CG + A VF ++ D+ WNSMI G
Sbjct: 177 GLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVR--DLVTWNSMITGC 234
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
GL E++ ++ EM V+P+EIT + ++S+C+ + F + ++G+
Sbjct: 235 VKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTI 294
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++D+ + G++ A + L Q T ++ G G LD+A + K+ E
Sbjct: 295 PLTNALMDMYVKCGELLTA-RVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE 353
>IMGA|Medtr4g025770.1 N-6 Adenine-specific DNA methylase;
Methyltransferase small chr04_pseudomolecule_IMGAG_V3
6213502-6205550 E EGN_Mt090430 20090702
Length = 971
Score = 307 bits (787), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 157/392 (40%), Positives = 245/392 (62%), Gaps = 3/392 (0%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ +T + + + + LG H YI + G E ++N+L+ MY ++ AR
Sbjct: 255 VRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMYVKCGELLTAR 314
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+FD + K LVSW +M+ GYA+ G + +AR++ +PE+ V+ W+ +I G V+ E
Sbjct: 315 VLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAIISGCVQAKQGKE 374
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
ALA+F EM++ +P++VTMV+ L AC+ LGALD G +HHY+ ++L + + L T+LVD
Sbjct: 375 ALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKLSIDVALGTALVD 434
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAKCG I AL VF + + W ++I G A HG +++L FS+M +G+ PDE
Sbjct: 435 MYAKCGNIARALQVFEE--IPQRNCLTWTAVICGLALHGNAQDALSYFSKMIHIGIVPDE 492
Query: 246 ITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
IT+L +LSAC HGGLV+E YF + K ++PK +HY+CMVD++ RAG + EA + +
Sbjct: 493 ITFLGVLSACCHGGLVEEGRKYFSEMSSKFNVSPKLKHYSCMVDLLGRAGHLEEAEELVK 552
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+P+ A++LGAL C +G + + E KL+E++P G YV L+++Y+ + W +
Sbjct: 553 NMPMAADAAVLGALFFACRVYGNVQIGERTAFKLLEIDPQDSGNYVLLASMYSEAKMWKE 612
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFV 396
ARS R+ M GV+K+PG S VE++G +H FV
Sbjct: 613 ARSARKLMNDKGVEKTPGCSLVEINGIVHEFV 644
Score = 143 bits (360), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 167/365 (45%), Gaps = 65/365 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ T+P L K LGL + G++ K G+E D FV N+ I M S ++ A V
Sbjct: 156 PDNHTYPLLLKGCCGQYSSCLGLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDV 215
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F+ V++LV+WNSM I G V++G EA+
Sbjct: 216 FNKSRVRDLVTWNSM-------------------------------ITGCVKRGLAIEAI 244
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+++EM +PNE+TM+ ++ +C+ + L+ G+ H Y+ ++ L T+ L +L+DMY
Sbjct: 245 KIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTIPLTNALMDMY 304
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV--------------------- 226
KCG + A +F + M + W +M+ G+A G +
Sbjct: 305 VKCGELLTARVLFDN--MAQKTLVSWTTMVLGYARFGFLDVAREILYKIPEKSVVPWNAI 362
Query: 227 ----------KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
KE+L LF EM I ++PD++T +N LSAC+ G + + + ++ +
Sbjct: 363 ISGCVQAKQGKEALALFHEMQIRTIEPDKVTMVNCLSACSQLGALDVGIWIHHYIERHKL 422
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGR 336
+ +VD+ A+ G +A A Q +IP Q A++ G HG A +
Sbjct: 423 SIDVALGTALVDMYAKCGNIARALQVFEEIP-QRNCLTWTAVICGLALHGNAQDALSYFS 481
Query: 337 KLIEL 341
K+I +
Sbjct: 482 KMIHI 486
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 109/240 (45%), Gaps = 4/240 (1%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDK 160
+ E +V SW+ I GYV GD + +++ M + G KP+ T +L C +
Sbjct: 117 IKELNVFSWNAAIRGYVESGDIEGGFMLYKRMLLGGTLKPDNHTYPLLLKGCCGQYSSCL 176
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G + +V+ + + + + M CG + A VF ++ D+ WNSMI G
Sbjct: 177 GLGVLGHVLKFGFECDIFVHNASITMLLSCGELSVAYDVFNKSRVR--DLVTWNSMITGC 234
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
GL E++ ++ EM V+P+EIT + ++S+C+ + F + ++G+
Sbjct: 235 VKRGLAIEAIKIYKEMEAEKVRPNEITMIGMISSCSQVQDLNLGKEFHCYIKEHGLEFTI 294
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++D+ + G++ A + L Q T ++ G G LD+A + K+ E
Sbjct: 295 PLTNALMDMYVKCGELLTA-RVLFDNMAQKTLVSWTTMVLGYARFGFLDVAREILYKIPE 353
>IMGA|Medtr3g143210.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 36886862-36889047 E
EGN_Mt090430 20090702
Length = 705
Score = 305 bits (780), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 162/451 (35%), Positives = 261/451 (57%), Gaps = 13/451 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITK-AGYESDRFVSNSLIHMYSSFR 59
M+ G+ PD +T +A A A L GL IH + K Y +D + N+L+ MY+ R
Sbjct: 243 MMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAKCR 302
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ AR VFD +P++++VS SM+ GYAK + AR +F M E++V+SW+ LI GY +
Sbjct: 303 RVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGYTQ 362
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT--- 176
G+ +EA+ +F ++ P T ++L ACA+L L GR H +++ +
Sbjct: 363 NGENEEAVRLFLLLKRESIWPTHYTFGNLLNACANLADLKLGRQAHTHILKHGFWFKSGE 422
Query: 177 ---LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ + SL+DMY KCG +++ VF M D WN+MI G+A +G E+L++F
Sbjct: 423 DSDIFVGNSLIDMYMKCGLVEDGRLVFER--MLERDNVSWNAMIVGYAQNGYGTEALEIF 480
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMAR 292
EM + G +PD +T + +LSAC+H GLV+E +F + ++G+ P +HY CMVD++ R
Sbjct: 481 REMLVSGERPDHVTMIGVLSACSHAGLVEEGRCYFQSMTIEHGLVPVKDHYTCMVDLLGR 540
Query: 293 AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGL 352
AG + EA + +P++P A + G+LL C HG + L + V +L+E++P G YV L
Sbjct: 541 AGCLDEANNLIQTMPMEPDAVVWGSLLAACKVHGNITLGKYVAERLLEIDPLNSGPYVLL 600
Query: 353 SNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
SN+YA RW +R+ M +MGV K PG S++ + LH F+ DK HP + IY++L
Sbjct: 601 SNMYAELGRWKDVVRVRKQMRQMGVIKQPGCSWISIQSHLHVFMVKDKRHPHKKDIYLIL 660
Query: 413 GFIVSQMK---HIVDYENQEYYFYDNEGKLL 440
+ QMK ++ + ++ E Y +++ +L+
Sbjct: 661 KILTEQMKRVGYVPEADDDEPYEEESDSELI 691
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 152/309 (49%), Gaps = 17/309 (5%)
Query: 14 PFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
PF C+ + + A +H I K + S+ F+ N L+ +Y + +ARKVFD +
Sbjct: 21 PFAKLLDTCVKSKSVFEARLVHARIIKTQFSSEIFIQNRLVDVYGKCGFLEDARKVFDHM 80
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
+N SWN++L K G + A +F MPE+D SW+ ++ G+ ++ ++EAL
Sbjct: 81 QQRNTFSWNAVLGALTKFGALDEALNLFKCMPERDQCSWNAMVSGFAQRDRFEEALRFVV 140
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
+M NE + S L ACA L L G +H + + L + + ++LVDMY+KC
Sbjct: 141 DMHSEDFVLNEYSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCR 200
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A F M ++ WNS+I + +G ++L++F M G++PDEIT ++
Sbjct: 201 VVASAQRAFDD--MDVRNIVSWNSLITCYEQNGPAGKALEVFVRMMNCGIEPDEITLASV 258
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-------CMVDVMARAGQVAEAYQFLC 304
SACA ++E L + K + Y +VD+ A+ +V EA
Sbjct: 259 ASACASLSAIREG------LQIHARVMKHDKYRNDLVLGNALVDMYAKCRRVNEARLVFD 312
Query: 305 QIPIQPTAS 313
++P++ S
Sbjct: 313 RMPLRDVVS 321
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 132/277 (47%), Gaps = 63/277 (22%)
Query: 13 FPFLAKASAC--LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
+ F + SAC L+ +G+ IHG I K+ Y D ++ ++L+ MYS R + +A++ FD
Sbjct: 152 YSFGSALSACAGLMDLSIGVQIHGLIAKSRYSLDVYMGSALVDMYSKCRVVASAQRAFDD 211
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+ V+N+VSWNS LI Y + G +AL VF
Sbjct: 212 MDVRNIVSWNS-------------------------------LITCYEQNGPAGKALEVF 240
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLVLRTSLVDMYAK 189
M G +P+E+T+ SV ACA L A+ +G +H V+ ++ LVL +LVDMYAK
Sbjct: 241 VRMMNCGIEPDEITLASVASACASLSAIREGLQIHARVMKHDKYRNDLVLGNALVDMYAK 300
Query: 190 CGAIQEALHVFR--------------SGLMKPS---------------DVFIWNSMIGGF 220
C + EA VF SG K S +V WN++I G+
Sbjct: 301 CRRVNEARLVFDRMPLRDVVSETSMVSGYAKASSVKAARLMFSNMMERNVVSWNALIAGY 360
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+G +E++ LF + + P T+ NLL+ACA+
Sbjct: 361 TQNGENEEAVRLFLLLKRESIWPTHYTFGNLLNACAN 397
>IMGA|Medtr5g098900.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 39503206-39501219 E
EGN_Mt090430 20090702
Length = 542
Score = 302 bits (774), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 153/419 (36%), Positives = 261/419 (62%), Gaps = 8/419 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P +LT+P + KA A L G +HG + K G ++D+F+ N++I+MY++
Sbjct: 118 MLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICNTIIYMYANGGL 177
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ AR+VFDG ++ ++V+ NSM+ GYAKCG+I +R +FD M + +SW+ +I G
Sbjct: 178 MSEARRVFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDDMITRTSVSWNSMISG 237
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
YVR G EAL +F +M+V G + +E TMVS+L ACAHLGAL G+ +H Y+ N L
Sbjct: 238 YVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQHGKWVHDYIKRNHFELN 297
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+++ T+++DMY KCG+++ A+ VF + + + WNS+I G A +G +E+ + FS++
Sbjct: 298 VIVVTAIIDMYCKCGSVENAVEVFETCPRR--GLSCWNSIIIGLAMNGHEREAFEFFSKL 355
Query: 237 HIVG-VKPDEITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAG 294
+KPD ++++ +L+AC H G + +A +F+ + K + P +HY C+VDV+ +AG
Sbjct: 356 ESSKLLKPDSVSFIGVLTACKHLGAINKARDYFELMMNKYEIEPSIKHYTCIVDVLGQAG 415
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
+ EA + + +P++P A + G+LL+ C H + +A +++ EL P YV +SN
Sbjct: 416 LLEEAEELIKGMPLKPDAIIWGSLLSSCRKHRNVQIARRAAQRVYELNPSDASGYVLMSN 475
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
V+A ++++A R M+ +K PG S +E++G +H F+A + HP +++IY +L
Sbjct: 476 VHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGGRLHPKTQEIYHLLN 534
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 134/285 (47%), Gaps = 15/285 (5%)
Query: 32 IHGYITKAGYESDRFVSN-SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
I+ +I K G + S +L S +I A K+F +P NL SWN+++ +++
Sbjct: 47 IYPHIIKTGLTLNPIASTRALTFCASPSGNINYAYKLFVRMPNPNLYSWNTIIRAFSRSS 106
Query: 91 DISMARQVF-DLMPEQ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
A +F D++ Q L++ + Y + G + + G + ++
Sbjct: 107 TPQFAISLFVDMLYSQIQPQYLTYPSVFKAYAQLGHAHYGAQLHGRVVKLGLQNDQFICN 166
Query: 147 SVLCACAHLGALDKGRMMHHYVID-NELPL---TLVLRTSLVDMYAKCGAIQEALHVFRS 202
+++ A+ G + + R V D +L L +V S++ YAKCG I E+ ++F
Sbjct: 167 TIIYMYANGGLMSEARR----VFDGKKLELYDHDVVAINSMIMGYAKCGEIDESRNLFDD 222
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
+ + S WNSMI G+ +G + E+L+LF++M + G + E T ++LL+ACAH G ++
Sbjct: 223 MITRTS--VSWNSMISGYVRNGKLMEALELFNKMQVEGFEVSEFTMVSLLNACAHLGALQ 280
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ D + +N ++D+ + G V A + P
Sbjct: 281 HGKWVHDYIKRNHFELNVIVVTAIIDMYCKCGSVENAVEVFETCP 325
>IMGA|Medtr4g136520.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 33357512-33355840 E
EGN_Mt090430 20090702
Length = 515
Score = 301 bits (771), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 165/428 (38%), Positives = 248/428 (57%), Gaps = 11/428 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P+ TF L KA L E + K G SD + +S+I+ +S
Sbjct: 79 MLNTNIRPNSHTFTTLVKACVSLSSLEQVFTLS---MKLGNSSDVYFVSSVINAFSKHSA 135
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I AR+VFD +N+V W S++ GY CG ++ AR VFD MP ++ S+S ++ GYVR
Sbjct: 136 IHLARQVFDECSNRNVVCWTSLVSGYCSCGLVNEARDVFDKMPLRNEASYSAMVSGYVRN 195
Query: 121 GDYDEALAVFEEMRVSGP-----KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
G + E + +F E++ K N +VSVL AC +GA ++G+ +H YV +N L
Sbjct: 196 GFFSEGVQLFRELKKKDKGCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEY 255
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
L L T+L+D Y KCG ++ A VF M DV W++MI G A +G K +L+LF +
Sbjct: 256 DLELGTALIDFYMKCGWVKGAEKVFNK--MPVKDVATWSAMILGLAINGNNKMALELFEK 313
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAG 294
M VG KP+E+T++ +L+AC H L E+ F + K +TP EHY C+VDV+AR+G
Sbjct: 314 MEKVGPKPNEVTFVGVLTACNHKSLFGESARLFGIMSEKYNITPSIEHYGCVVDVLARSG 373
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
QV +A F+ + I+P ++ G+LLNGC+ HG +L + VG+ LIE EP GRYV L+N
Sbjct: 374 QVKKALTFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFEPKHSGRYVLLAN 433
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGF 414
+YA +W+ +R+ M+ GV G+SF+E+ +H+F A DK S +IY +L
Sbjct: 434 MYANMGKWEGVSEVRKLMKDRGVMIVSGWSFIEIDQTIHKFFADDKCCLYSREIYDVLSH 493
Query: 415 IVSQMKHI 422
+ +++ I
Sbjct: 494 LGKKVEDI 501
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD A +F +P ++ ++ +I Y + + VF +M + +PN T +++
Sbjct: 36 GDFRYAETLFTHIPNPNIFDYNSIITSYTTNSQFHKLFFVFTKMLNTNIRPNSHTFTTLV 95
Query: 150 CACAHLGALD--------------------------KGRMMH--HYVIDNELPLTLVLRT 181
AC L +L+ K +H V D +V T
Sbjct: 96 KACVSLSSLEQVFTLSMKLGNSSDVYFVSSVINAFSKHSAIHLARQVFDECSNRNVVCWT 155
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH---- 237
SLV Y CG + EA VF M + +++M+ G+ +G E + LF E+
Sbjct: 156 SLVSGYCSCGLVNEARDVFDK--MPLRNEASYSAMVSGYVRNGFFSEGVQLFRELKKKDK 213
Query: 238 -IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
+K + +++L+AC G +E + + +NG+ E ++D + G V
Sbjct: 214 GCACLKFNGALLVSVLNACTMVGAFEEGKWIHSYVEENGLEYDLELGTALIDFYMKCGWV 273
Query: 297 AEAYQFLCQIPIQPTAS----MLGALLNGCMNHGKLDLAETVGR 336
A + ++P++ A+ +LG +NG N L+L E + +
Sbjct: 274 KGAEKVFNKMPVKDVATWSAMILGLAING-NNKMALELFEKMEK 316
>IMGA|Medtr4g155250.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 38295439-38289479 H
EGN_Mt090430 20090702
Length = 985
Score = 300 bits (769), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 219/372 (58%), Gaps = 3/372 (0%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + N++I Y + + AR++F+ +P +N+ SWN+M+ GY + GDI+ AR+ FD+
Sbjct: 294 EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISSWNTMITGYGQIGDIAQARKFFDM 353
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP++D +SW+ +I GY + G Y+EAL +F E++ G N T L CA + AL+ G
Sbjct: 354 MPQRDCVSWAAIIAGYAQSGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELG 413
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H + + +L+ MY KCG+I EA F ++ DV WN+M+ G+A
Sbjct: 414 KQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTFEG--IEEKDVVSWNTMLAGYA 471
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKS 280
HG +++L +F M GVKPDEIT + +LSAC+H GL+ +F + K+ G+ P S
Sbjct: 472 RHGFGRQALTVFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTS 531
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+HY CM+D++ RAG++ EA + +P QP A+ GALL HG +L E + +
Sbjct: 532 KHYTCMIDLLGRAGRLEEAQDLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFK 591
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDK 400
+EP G YV LSN+YA RW A MR M +GV+K PGYS+VE+ +H F D
Sbjct: 592 MEPQNSGMYVLLSNLYAASGRWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDC 651
Query: 401 SHPSSEQIYMML 412
SHP E+IY L
Sbjct: 652 SHPEKERIYAYL 663
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 27/300 (9%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N++I Y AR +FD +P ++L SWN ML GY + + AR++FDLMPE+DV+
Sbjct: 84 NAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVV 143
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ L+ GY + G DEA VF+ M P+ N ++ +L A H G +++ ++
Sbjct: 144 SWNSLLSGYAQNGYVDEAREVFDNM----PEKNSISWNGLLAAYVHNGRIEEACLL---- 195
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+++ L+ L+ + + + +A +F M D WN+MI G+A G + +
Sbjct: 196 FESKSDWDLISWNCLMGGFVRKKKLGDARWLFDK--MPVRDAISWNTMISGYAQGGGLSQ 253
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE-HYACMV 287
+ LF E D T+ ++S G++ EA FFD M K+E Y M+
Sbjct: 254 ARRLFDE----SPTRDVFTWTAMVSGYVQNGMLDEAKTFFD-----EMPEKNEVSYNAMI 304
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL-DLAETVGRKLIELEPHQD 346
+ ++ A + +P + +S ++ G +G++ D+A+ RK ++ P +D
Sbjct: 305 AGYVQTKKMDIARELFESMPCRNISS-WNTMITG---YGQIGDIAQ--ARKFFDMMPQRD 358
Score = 114 bits (286), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 112/209 (53%), Gaps = 12/209 (5%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N L+ + + + +AR +FD +PV++ +SWN+M+ GYA+ G +S AR++FD P +DV
Sbjct: 208 NCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTRDVF 267
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+W+ ++ GYV+ G DEA F+EM P+ NEV+ +++ +D R +
Sbjct: 268 TWTAMVSGYVQNGMLDEAKTFFDEM----PEKNEVSYNAMIAGYVQTKKMDIARELFE-- 321
Query: 169 IDNELPL-TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+P + +++ Y + G I +A F +M D W ++I G+A G +
Sbjct: 322 ---SMPCRNISSWNTMITGYGQIGDIAQARKFF--DMMPQRDCVSWAAIIAGYAQSGHYE 376
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACA 256
E+L++F E+ G + T+ LS CA
Sbjct: 377 EALNMFVEIKQDGESLNRATFGCALSTCA 405
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 146/291 (50%), Gaps = 21/291 (7%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D F N ++ Y + +AR++FD +P K++VSWNS+L GYA+ G + AR+VFD
Sbjct: 108 ERDLFSWNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDN 167
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE++ +SW+ L+ YV G +EA +FE ++ ++S C G + K
Sbjct: 168 MPEKNSISWNGLLAAYVHNGRIEEACLLFE-------SKSDWDLISWNCLMG--GFVRKK 218
Query: 162 RMMHHYVIDNELPLTLVLR-TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
++ + +++P+ + +++ YA+ G + +A +F + DVF W +M+ G+
Sbjct: 219 KLGDARWLFDKMPVRDAISWNTMISGYAQGGGLSQARRLFDESPTR--DVFTWTAMVSGY 276
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
+G++ E+ F EM + +E++Y +++ + A F+ + ++
Sbjct: 277 VQNGMLDEAKTFFDEMP----EKNEVSYNAMIAGYVQTKKMDIARELFESMPCRNISS-- 330
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ M+ + G +A+A +F +P + S A++ G G + A
Sbjct: 331 --WNTMITGYGQIGDIAQARKFFDMMPQRDCVS-WAAIIAGYAQSGHYEEA 378
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/281 (29%), Positives = 138/281 (49%), Gaps = 23/281 (8%)
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+A VF+ +P ++ VS+N+M+ GY + ++AR +FD MPE+D+ SW+ ++ GYVR
Sbjct: 67 SALHVFNTMPRRSSVSYNAMISGYLRNSKFNLARNLFDQMPERDLFSWNVMLTGYVRNCR 126
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+A +F+ M P+ + V+ S+L A G +D+ R V DN +
Sbjct: 127 LGDARRLFDLM----PEKDVVSWNSLLSGYAQNGYVDEAR----EVFDNMPEKNSISWNG 178
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+ Y G I+EA +F S D+ WN ++GGF + ++ LF +M +
Sbjct: 179 LLAAYVHNGRIEEACLLFES--KSDWDLISWNCLMGGFVRKKKLGDARWLFDKMPV---- 232
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D I++ ++S A GG + +A FD T + MV + G + EA F
Sbjct: 233 RDAISWNTMISGYAQGGGLSQARRLFD----ESPTRDVFTWTAMVSGYVQNGMLDEAKTF 288
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
++P + S A++ G + K+D+A R+L E P
Sbjct: 289 FDEMPEKNEVS-YNAMIAGYVQTKKMDIA----RELFESMP 324
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 101/217 (46%), Gaps = 33/217 (15%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
+ TF A + ELG IHG K GY + FV N+L+ MY I A F
Sbjct: 393 NRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVGNALLAMYFKCGSIDEANDTF 452
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+GI K++VSWN+ML GYA+ G RQ AL
Sbjct: 453 EGIEEKDVVSWNTMLAGYARHG---FGRQ----------------------------ALT 481
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMY 187
VFE M+ +G KP+E+TMV VL AC+H G LD+G + D + T T ++D+
Sbjct: 482 VFESMKTAGVKPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLL 541
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+ G ++EA + R+ +P W +++G HG
Sbjct: 542 GRAGRLEEAQDLIRNMPFQPGAA-SWGALLGASRIHG 577
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 23/245 (9%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+ + D+L W+ I ++R G D AL VF M P+ + V+ +++ +
Sbjct: 44 VKDPDILKWNKAISTHMRNGHCDSALHVFNTM----PRRSSVSYNAMISGYLRNSKFNLA 99
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
R + + + +L V+ T Y + + +A +F LM DV WNS++ G+A
Sbjct: 100 RNLFDQMPERDLFSWNVMLTG----YVRNCRLGDARRLF--DLMPEKDVVSWNSLLSGYA 153
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
+G V E+ ++F M + + I++ LL+A H G ++EA F+ +
Sbjct: 154 QNGYVDEAREVFDNMP----EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLIS--- 206
Query: 282 HYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
+ C++ R ++ +A ++P++ S +++G G L A R+L +
Sbjct: 207 -WNCLMGGFVRKKKLGDARWLFDKMPVRDAIS-WNTMISGYAQGGGLSQA----RRLFDE 260
Query: 342 EPHQD 346
P +D
Sbjct: 261 SPTRD 265
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 60/145 (41%), Gaps = 33/145 (22%)
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
LL G L A YF+ + +TP S+HY CM+D++ R ++ EA +P +P
Sbjct: 771 LLVVIYTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEAQDLRRNMPFEP 830
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
GA N C L N+YA R A MR
Sbjct: 831 -----GAASNVC----------------------------PLFNLYAALGRRVYADEMRS 857
Query: 371 AMERMGVKKSPGYSFVEMHGALHRF 395
M +GV+K PGYS+ E+ +H F
Sbjct: 858 KMRDVGVQKVPGYSWFEVQNKIHTF 882
>IMGA|Medtr3g139040.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 35666625-35663484 E
EGN_Mt090430 20090702
Length = 973
Score = 298 bits (764), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 155/433 (35%), Positives = 245/433 (56%), Gaps = 34/433 (7%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G D +TF AKA+ CL++ + G IH + K + D FV
Sbjct: 495 GEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV----------------- 537
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
GI LD Y KCG++ AR+VF+ +P D ++W+ +I G V G+ +
Sbjct: 538 ---ISGI-----------LDMYLKCGEMKSARKVFNQIPSPDDVAWTTVISGCVENGEEE 583
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL + +MR++G +P+E T +++ AC+ L AL++G+ +H ++ + TSLV
Sbjct: 584 QALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLV 643
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG I++A +FR M V +WN+MI G A HG +E+L+ F+EM GV PD
Sbjct: 644 DMYAKCGNIEDAYGLFRR--MNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPD 701
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T++ +LSAC+H GL +A+ FD + K G+ P+ EHY+C+VD ++RAG + EA + +
Sbjct: 702 RVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVV 761
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P + +A+M LLN C G + E V KL ++P YV LSN+YA +W+
Sbjct: 762 SSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDSAAYVLLSNIYAAANQWE 821
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIV 423
A S R M+R+ VKK PG+S+++M +H FVA D+SH ++ IY + +++ ++K
Sbjct: 822 NAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETDLIYNKVEYVMKRIKEEG 881
Query: 424 DYENQEYYFYDNE 436
+ E+ D E
Sbjct: 882 YVPDTEFALVDIE 894
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 97/344 (28%), Positives = 165/344 (47%), Gaps = 59/344 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ V D LT+ + A L ELG IHG + + G+ D+FVS +
Sbjct: 288 MIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGW--DQFVSVA---------- 335
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
NS ++ Y K G ++ AR++F M E D++SW+ +I G R
Sbjct: 336 -------------------NSAINMYVKAGSVNYARRMFGQMKEVDLISWNTVISGCARS 376
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL-GALDKGRMMHHYVIDNELPLTLVL 179
G + +L +F ++ SG P++ T+ SVL AC+ L + GR +H + + L +
Sbjct: 377 GLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFV 436
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T+L+D+Y+K G ++EA +F + D+ WN+M+ GF +E+L LFS MH
Sbjct: 437 STALIDVYSKGGKMEEAELLFHN--QDGFDLASWNAMMHGFTVSDNYREALRLFSLMHER 494
Query: 240 GVKPDEITYLNLLSACAHGGLVK------------EAWYFFDCLGKNGMTPKSEHYACMV 287
G K D+IT+ N +A A G LV+ + + +D +G ++
Sbjct: 495 GEKADQITFAN--AAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISG----------IL 542
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
D+ + G++ A + QIP P +++GC+ +G+ + A
Sbjct: 543 DMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGCVENGEEEQA 585
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 149/316 (47%), Gaps = 52/316 (16%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
A+ GY K G + D FV+ +L+++Y+ F+ I AR +FD +PV+++V WN M+ Y + G
Sbjct: 143 ALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDRMPVRDVVLWNVMMKAYVEMG 202
Query: 91 -------------------------DISMA---RQVFDLMPEQ---------------DV 107
I M + VF+ EQ DV
Sbjct: 203 AGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDV 262
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
W+ + Y++ G+ EA+ F +M S + +T + +L A L L+ G+ +H
Sbjct: 263 TVWNKTLSSYLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGA 322
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
V+ + + S ++MY K G++ A +F G MK D+ WN++I G A GL +
Sbjct: 323 VVRFGWDQFVSVANSAINMYVKAGSVNYARRMF--GQMKEVDLISWNTVISGCARSGLEE 380
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW----YFFDCLGKNGMTPKSEHY 283
SL LF ++ G+ PD+ T ++L AC+ ++E++ C K G+ S
Sbjct: 381 CSLRLFIDLLRSGLLPDQFTITSVLRACSS---LEESYCVGRQVHTCALKAGIVLDSFVS 437
Query: 284 ACMVDVMARAGQVAEA 299
++DV ++ G++ EA
Sbjct: 438 TALIDVYSKGGKMEEA 453
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 86/332 (25%), Positives = 148/332 (44%), Gaps = 35/332 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE-LGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
+LR G+ PD T + +A + L + +G +H KAG D FVS +LI
Sbjct: 389 LLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALI------- 441
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
D Y+K G + A +F D+ SW+ ++ G+
Sbjct: 442 ------------------------DVYSKGGKMEEAELLFHNQDGFDLASWNAMMHGFTV 477
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+Y EAL +F M G K +++T + A L L +G+ +H VI L +
Sbjct: 478 SDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFV 537
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ ++DMY KCG ++ A VF + P DV W ++I G +G +++L + +M +
Sbjct: 538 ISGILDMYLKCGEMKSARKVFNQ-IPSPDDV-AWTTVISGCVENGEEEQALFTYHQMRLA 595
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GV+PDE T+ L+ AC+ +++ + K +VD+ A+ G + +A
Sbjct: 596 GVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGNIEDA 655
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
Y ++ + A + A++ G HG + A
Sbjct: 656 YGLFRRMNTRSVA-LWNAMIVGLAQHGNAEEA 686
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 101/227 (44%), Gaps = 29/227 (12%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV--KNLVSWNSMLDG 85
LG H I +G DR+V+N+LI MY+ + +ARK+FD P ++LV++N++L
Sbjct: 31 LGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSDRDLVTYNAILAA 90
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YA G++ + EA +F +R S T+
Sbjct: 91 YAHTGELHDVEKTH-------------------------EAFHIFRLLRQSVMLTTRHTL 125
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+ C G+ + Y + L + + +LV++YAK I+EA +F M
Sbjct: 126 SPLFKLCLLYGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQRIREARVLFDR--M 183
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
DV +WN M+ + G E L LFS H G++PD ++ +L
Sbjct: 184 PVRDVVLWNVMMKAYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTIL 230
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 87/207 (42%), Gaps = 40/207 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV PD TF L KA + L E G IH I K D FV SL+ MY+ +
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGN 651
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A +F + +++ WN+M+ G A+
Sbjct: 652 IEDAYGLFRRMNTRSVALWNAMIVGLAQ-------------------------------H 680
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPL 175
G+ +EAL F EM+ G P+ VT + VL AC+H G M Y ++ E+
Sbjct: 681 GNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEH 740
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRS 202
+ LVD ++ G IQEA V S
Sbjct: 741 Y----SCLVDALSRAGHIQEAEKVVSS 763
>IMGA|Medtr3g127370.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 32293522-32297452 E
EGN_Mt090430 20090702
Length = 596
Score = 297 bits (761), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 162/418 (38%), Positives = 248/418 (59%), Gaps = 11/418 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + + P+ TF L K+ L E + K+G SD + +S+I+++S
Sbjct: 113 MLNMNIRPNSHTFTTLVKSCVTLSSLE---QVFTLTMKSGNSSDVYFVSSVINVFSKHGA 169
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I AR+VFD +N+V W S++ GY CG ++ R VFD MP+++ S S ++ GYVR
Sbjct: 170 IHLARQVFDESSNRNVVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRN 229
Query: 121 GDYDEALAVFEEMRVSGP-----KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
+ E + +F E++ K N +VSVL AC +GA ++G+ +H YV +N L
Sbjct: 230 SFFSEGVQLFRELKKKDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEY 289
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
L L T+L+D YAKCG +++A VF L+K DV W++MI G A +G K +L+LF +
Sbjct: 290 DLELGTALIDFYAKCGWVKDAEKVFDKMLVK--DVATWSAMILGLAINGNNKMALELFEK 347
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAG 294
M VG KP+E+T++ +L+AC H L E+ F + K +TP EHY C+VD++AR+G
Sbjct: 348 MEKVGPKPNEVTFVGVLTACNHKSLFGESSRLFGIMSEKYNITPSIEHYGCIVDILARSG 407
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
QV +A F+ + I+P ++ G+LLNGC+ HG +L + VG+ LIE +P GRYV L+N
Sbjct: 408 QVKKALIFINSMHIEPDGAIWGSLLNGCLMHGHYELGQKVGKYLIEFDPEHSGRYVLLAN 467
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+YA +W+ +R+ M+ GV G+SF+E+ LH+F A DK S +IY +L
Sbjct: 468 MYANMGKWEGVSEVRKLMKDRGVVIVYGWSFIEIDQTLHKFSADDKCCLYSGEIYEVL 525
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 126/287 (43%), Gaps = 46/287 (16%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD A +F MP ++ ++ +I Y +D++L+VF +M +PN T +++
Sbjct: 70 GDFRYAETLFTHMPNPNIFDYNSIITSYTTNSQFDKSLSVFTKMLNMNIRPNSHTFTTLV 129
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
+C L +L++ + + + + +S++++++K GAI A VF + +
Sbjct: 130 KSCVTLSSLEQ---VFTLTMKSGNSSDVYFVSSVINVFSKHGAIHLARQVFDESSNR--N 184
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEM----------HIVG------------------- 240
V W S++ G+ GLV E D+F +M + G
Sbjct: 185 VVCWTSLVSGYCSCGLVNEVRDVFDKMPQRNEASNSAMVSGYVRNSFFSEGVQLFRELKK 244
Query: 241 -------VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
VK + +++L+AC G +E + + +NG+ E ++D A+
Sbjct: 245 KDKGRARVKFNGALLVSVLNACTVMGAFEEGKWIHSYVEENGLEYDLELGTALIDFYAKC 304
Query: 294 GQVAEAYQFLCQIPIQPTAS----MLGALLNGCMNHGKLDLAETVGR 336
G V +A + ++ ++ A+ +LG +NG N L+L E + +
Sbjct: 305 GWVKDAEKVFDKMLVKDVATWSAMILGLAING-NNKMALELFEKMEK 350
>IMGA|Medtr1g047310.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 11382680-11384850 E
EGN_Mt090430 20090702
Length = 526
Score = 296 bits (758), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/422 (39%), Positives = 253/422 (59%), Gaps = 8/422 (1%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R+G+ D + P++ K+ CL LG IH G + + V +SLI MYS + D+
Sbjct: 105 RLGLSFDSYSLPYVLKSVVCLNDFGLGKQIHCVGVVTGLDKNVSVCSSLIQMYSCY-DVC 163
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE--QDVLSWSCLIDGYVRK 120
+ARK+FD V N+M+ Y K GD+S AR++FD M E +DV SW+ +I GY +
Sbjct: 164 SARKLFDEFGGNGCV-LNAMIVAYVKVGDVSNARKLFDSMLERDKDVFSWTAMISGYTQA 222
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ +EA+ +F M++ KP+E+ +++VL ACA LGAL G +H+Y+ ++L + L
Sbjct: 223 HNPNEAIKLFRRMQLENVKPDEIAILAVLSACADLGALHLGEWIHNYIEKHKLSKIVPLY 282
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+DMYAK G I++AL +F + MK + W +MI G A HGL KE+L +FS M
Sbjct: 283 NSLIDMYAKSGNIRKALELFEN--MKHKTIITWTTMIAGLALHGLGKEALRVFSCMEKED 340
Query: 241 -VKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
VKP+E+T++ +LSAC+H GLV+ YF + G+ PK EHY CM+D++ RAG + E
Sbjct: 341 RVKPNEVTFIAILSACSHVGLVELGRDYFTSMRSRYGIEPKIEHYGCMIDLLGRAGHLQE 400
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + ++P + A++ G+LL G +LAE R L LEP G Y LSN YA
Sbjct: 401 AKEMVLRMPFEANAAIWGSLLAASTRCGDAELAEEALRHLTVLEPGHCGNYSLLSNTYAS 460
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
RW+++R +R+ M+ GV+K PG SF+E++ ++ F+A DK IY +L + Q
Sbjct: 461 LGRWNESRMVRKVMQDAGVEKVPGVSFIEVNNIVYEFIAGDKLSIYFVDIYDVLHSLDGQ 520
Query: 419 MK 420
+K
Sbjct: 521 IK 522
>IMGA|Medtr5g006540.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 737972-740846 E
EGN_Mt090430 20090702
Length = 726
Score = 293 bits (751), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 146/393 (37%), Positives = 234/393 (59%), Gaps = 3/393 (0%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH ++ GY D + +LI+MY++ + ARK++DG+ K+L+ +ML GYAK
Sbjct: 241 GRTIHEFVKDNGYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAK 300
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G + AR +FD M E+D++ WS +I GY EAL +F+EM P+++TM+SV
Sbjct: 301 LGMVKDARFIFDQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSV 360
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ AC+H+GAL + +H YV + L + +L+DMYAKCG + +A VF + M
Sbjct: 361 ISACSHVGALAQANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFEN--MPRK 418
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+V W+SMI FA HG ++ LF M V ++P+ +T++ +L AC H GLV+E F
Sbjct: 419 NVISWSSMINAFAMHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLF 478
Query: 269 DC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ ++G++P EHY CMVD+ RA + +A + + +P P + G+L++ C HG+
Sbjct: 479 SSMINEHGISPTREHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGE 538
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
+L E ++L+ELEP DG V LSN+YA +RW+ +R++M G+ K S +E
Sbjct: 539 AELGEFAAKRLLELEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIE 598
Query: 388 MHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
++ +H F+ D+ H S++IY L +VS++K
Sbjct: 599 INNQVHMFMMADRYHKQSDEIYEKLDEVVSKLK 631
Score = 168 bits (425), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 110/374 (29%), Positives = 182/374 (48%), Gaps = 62/374 (16%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +FP L KA + + GL IHG +K G+ D F+ LI MY+S R++
Sbjct: 120 DRFSFPSLLKAVSKVSAFNHGLEIHGLASKLGFVDDPFIQTGLIAMYAS------CRRIM 173
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
D AR +FD M D ++W+ +IDGY + G YD+AL
Sbjct: 174 D-------------------------ARLLFDKMCHPDAVAWNMIIDGYCQNGHYDDALR 208
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+FE+MR S KP+ V + +VL AC H G L GR +H +V DN + L+T+L++MYA
Sbjct: 209 LFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGYAIDSHLQTALINMYA 268
Query: 189 KCGAIQEALHVF-------------------RSGLMKPS----------DVFIWNSMIGG 219
CGA+ A ++ + G++K + D+ W++MI G
Sbjct: 269 NCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQMIERDLVCWSAMISG 328
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+A +E+L LF EM PD+IT L+++SAC+H G + +A + + ++G
Sbjct: 329 YAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQANWIHTYVDRSGFGRA 388
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
++D+ A+ G + +A + +P + S +++N HG D A + R++
Sbjct: 389 LSVNNALIDMYAKCGNLVKAREVFENMPRKNVIS-WSSMINAFAMHGNADSAIKLFRRMK 447
Query: 340 ELEPHQDG-RYVGL 352
E+ +G ++G+
Sbjct: 448 EVNIEPNGVTFIGV 461
>IMGA|Medtr6g013350.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 2807165-2805252 E
EGN_Mt090430 20090702
Length = 637
Score = 292 bits (748), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 158/397 (39%), Positives = 249/397 (62%), Gaps = 6/397 (1%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
++G +H + K G+ V N+L+++Y F + ARK+F+GI V+++VSW+ L+G
Sbjct: 140 KVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIEVRSVVSWSCFLEGL 199
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTM 145
K + R +FD MPE++ ++W+ +I GYV G EA + +EM G + + VT+
Sbjct: 200 VKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKEMVFGCGFRLSFVTL 259
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
SVL AC+ G + GR +H Y + L +++ TSLVDMYAKCG I AL VFRS L
Sbjct: 260 CSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKCGRINAALSVFRSML 319
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+ +V WN+M+GG A HG+ K ++D+F M + VKPD +T++ LLSAC+H GLV++
Sbjct: 320 KR--NVVAWNAMLGGLAMHGMGKIAVDMFPSM-VEEVKPDGVTFMALLSACSHSGLVEKG 376
Query: 265 W-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
W YF D + P+ EHYACMV ++ RAG++ EA + + I P +LG+L+ C
Sbjct: 377 WDYFHDLEPVYRIKPEIEHYACMVGLLGRAGRLEEAEIMVKNMRIPPNEVVLGSLIGSCY 436
Query: 324 NHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGY 383
HG+L L E + R L+E++P ++ LSN+YA+ + +KA S+R+ +++ G+KK PG
Sbjct: 437 AHGRLQLGEKIMRDLLEMDPLNTEYHIVLSNMYALSGKVEKANSLRQVLKKRGIKKVPGM 496
Query: 384 SFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
S + + G LH+F+A DKSH + +IYM L ++ +++
Sbjct: 497 SSIYVDGKLHQFIAGDKSHTRTSEIYMKLDEMICRLR 533
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/354 (24%), Positives = 135/354 (38%), Gaps = 70/354 (19%)
Query: 29 GLAIHGYITKAGYES--DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
G +H G S + F+ N+L+H+Y S +ARK+FD IP
Sbjct: 39 GQQLHATAIVTGLISSPNHFLRNALLHLYGSCSLPSHARKLFDEIP-------------- 84
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
+D + ++ LI R E+L +F +MR + V MV
Sbjct: 85 ---------------QSHKDSVDYTALI----RHCPPFESLKLFIQMRQFDLPLDGVVMV 125
Query: 147 SVLCACAHLGALDK--GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR--- 201
L ACA LG D G MH V+ + +L+++Y K G + EA +F
Sbjct: 126 CALNACARLGGGDTKVGSQMHVGVVKFGFVKFDKVCNALMNVYVKFGLVGEARKMFEGIE 185
Query: 202 -----------SGLMKPSDV---------------FIWNSMIGGFACHGLVKESLDLFSE 235
GL+K V W MI G+ +G KE+ L E
Sbjct: 186 VRSVVSWSCFLEGLVKWESVESGRVLFDEMPERNEVAWTVMIVGYVGNGFTKEAFLLLKE 245
Query: 236 MHI-VGVKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M G + +T ++LSAC+ G V W + + G+ +VD+ A+
Sbjct: 246 MVFGCGFRLSFVTLCSVLSACSQSGDVCVGRWVHCYAVKEMGLDFGVMVGTSLVDMYAKC 305
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
G++ A + ++ A+L G HG +A + ++E E DG
Sbjct: 306 GRINAALSVFRSM-LKRNVVAWNAMLGGLAMHGMGKIAVDMFPSMVE-EVKPDG 357
>IMGA|Medtr4g134960.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 32635960-32638928 E
EGN_Mt090430 20090702
Length = 908
Score = 292 bits (747), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 250/437 (57%), Gaps = 36/437 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV PD T + A AC + G +H Y+ K G S+ V+N+LI+MY
Sbjct: 388 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMY----- 442
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG + AR VF +P +D++SW+ +I GY +
Sbjct: 443 --------------------------AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 476
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+EAL +F +M+ KP+++TM VL ACA L ALDKGR +H +++ L +
Sbjct: 477 LLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVA 535
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LVDMYAKCG + A +F ++ D+ W MI G+ HG E++ F+EM I G
Sbjct: 536 CALVDMYAKCGLLVLAQLLF--DMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG 593
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
++PDE ++ +L+AC+H GL+ E W FF+ + + G+ PK EHYAC+VD++AR G +++A
Sbjct: 594 IEPDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKA 653
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+F+ +PI+P ++ G LL+GC H + LAE V + ELEP YV L+NVYA
Sbjct: 654 YKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEA 713
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+W++ + +R+ M++ G K++PG S++E+ G + FVA + HP +++I ++L + QM
Sbjct: 714 EKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQM 773
Query: 420 KHIVDYENQEYYFYDNE 436
++ DY + Y NE
Sbjct: 774 QN-EDYSSMFRYVLINE 789
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 116/375 (30%), Positives = 177/375 (47%), Gaps = 92/375 (24%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +GV D T + A A + LG A+HG+ KA + + SN+L
Sbjct: 287 MLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFSNTL--------- 337
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y+KCG+++ A +VF M + ++SW+ +I YVR+
Sbjct: 338 ----------------------LDMYSKCGNLNGATEVFVKMGDTTIVSWTSIIAAYVRE 375
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y +A+ +F+EM+ G +P+ T+ S++ ACA +LDKGR +H YVI N + L +
Sbjct: 376 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 435
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MYAKCG+++EA VF +K D+ WN+MIGG++ + L E+L+LF +M
Sbjct: 436 NALINMYAKCGSVEEARLVFSKIPVK--DIVSWNTMIGGYSQNLLPNEALELFLDMQ-KQ 492
Query: 241 VKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYAC-MVD 288
KPD+IT +L ACA HG +++ YF D H AC +VD
Sbjct: 493 FKPDDITMACVLPACAGLAALDKGREIHGHILRRG-YFSDL-----------HVACALVD 540
Query: 289 VMARAGQVAEAYQFLCQIP----------------------------------IQPTASM 314
+ A+ G + A IP I+P S
Sbjct: 541 MYAKCGLLVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESS 600
Query: 315 LGALLNGCMNHGKLD 329
A+LN C + G L+
Sbjct: 601 FSAILNACSHSGLLN 615
Score = 145 bits (367), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 160/333 (48%), Gaps = 36/333 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++GV + TF + K A L K + +HGY+ K G+ S+ V NSLI Y F
Sbjct: 186 MQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLKLGFGSNTAVVNSLIAAYFKFGG 245
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A +FD + ++VSWNSM++G C+++G+
Sbjct: 246 VESAHNLFDELSEPDVVSWNSMING--------------------------CVVNGFSGN 279
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G L +F +M + G + + T+VSVL ACA++G L GR +H + + +V
Sbjct: 280 G-----LEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGRALHGFGVKACFSEEVVFS 334
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY+KCG + A VF M + + W S+I + GL +++ LF EM G
Sbjct: 335 NTLLDMYSKCGNLNGATEVFVK--MGDTTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKG 392
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V+PD T +++ ACA + + + KNGM ++++ A+ G V EA
Sbjct: 393 VRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEAR 452
Query: 301 QFLCQIPIQPTAS---MLGALLNGCMNHGKLDL 330
+IP++ S M+G + + L+L
Sbjct: 453 LVFSKIPVKDIVSWNTMIGGYSQNLLPNEALEL 485
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 113/215 (52%), Gaps = 8/215 (3%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG-----YAKCGDISMARQVFDLMPE 104
S++ + + + + + ++V I + N +S + L Y CGD+ R++FD +
Sbjct: 99 SVLQLCAEKKSLEDGKRVHSVI-ISNGISVDEALGAKLVFMYVNCGDLVQGRKIFDKIMN 157
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
V W+ L+ Y + G++ E++++F++M+ G N T VL A LG + + + +
Sbjct: 158 DKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV 217
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
H YV+ + SL+ Y K G ++ A ++F L +P DV WNSMI G +G
Sbjct: 218 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE-LSEP-DVVSWNSMINGCVVNG 275
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
L++F +M I+GV+ D T +++L ACA+ G
Sbjct: 276 FSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIG 310
>IMGA|Medtr8g073570.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 14383159-14386718 H
EGN_Mt090430 20090702
Length = 647
Score = 291 bits (745), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 164/460 (35%), Positives = 250/460 (54%), Gaps = 40/460 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G PD+ T+P + KA +C GL IHG + K G + + FV N LI MY
Sbjct: 68 MVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGC 127
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYA--------------------KCGDISMA----- 95
+ AR+VFD + K++VSWNSM+ GYA K +MA
Sbjct: 128 LFEARRVFDEMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPA 187
Query: 96 ------------RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV 143
++F + ++++SW+ +I Y++ +A+ ++ +M +P+ +
Sbjct: 188 VANTSSENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAI 247
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T SVL AC L AL GR +H YV +L L+L SL+DMYA+CG + +A VF
Sbjct: 248 TFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCGCLDDAKRVFDR- 306
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
MK DV W S+I + G ++ LF+EM G PD I ++ +LSAC+H GL+ E
Sbjct: 307 -MKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDE 365
Query: 264 AWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
+F + + +TP+ EHYAC+VD++ RAG+V EAY + Q+PI+P + LL+ C
Sbjct: 366 GRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPNERVWATLLSSC 425
Query: 323 MNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPG 382
+D+ L++L P Q G YV LSN+YA RW + +R M+R ++K+PG
Sbjct: 426 RVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSVMKRKKIRKTPG 485
Query: 383 YSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
S VE++ +H F+A D SHP S++IY LG +V++MK +
Sbjct: 486 ISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKEL 525
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 126/262 (48%), Gaps = 11/262 (4%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++ YA CG+ + R+VFD M +++V+ ++ +I YV YD+ L VF EM G +P+
Sbjct: 17 LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 76
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T VL AC+ L G ++H V+ L L + L+ MY KCG + EA VF
Sbjct: 77 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 136
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+ K DV WNSM+ G+A + ++L++ EM G KPD T +L+ A A+
Sbjct: 137 EMIWK--DVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS-- 192
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGAL 318
E + + + N + M+ V + +A Q+ ++P A ++
Sbjct: 193 SENVLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASV 252
Query: 319 LNGCMNHGKLDLAETVGRKLIE 340
L C + L L GR++ E
Sbjct: 253 LPACGDLSALLL----GRRIHE 270
>IMGA|Medtr1g087270.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 17537382-17534967 H
EGN_Mt090430 20090702
Length = 795
Score = 291 bits (744), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/447 (34%), Positives = 250/447 (55%), Gaps = 11/447 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR----ELGLAIHGYITKAGYE-SDRFV---SNSLI 52
M +G+ D T+ L A ++ G +HGYI + E S FV +N+LI
Sbjct: 274 MHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPSHHFVLSVNNALI 333
Query: 53 HMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSC 112
Y+ + + AR+VFD +PV++++SWN++L GY I A +F MPE++VL+W+
Sbjct: 334 TFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANSIFSEMPERNVLTWTV 393
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+I G + G +E L +F +M+ G +P + + AC+ LG+LD G+ +H VI
Sbjct: 394 MISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGSLDNGQQIHSQVIRLG 453
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L +L+ MY++CG ++ A VF + M D WN+MI A HG ++++L
Sbjct: 454 HDSGLSAGNALITMYSRCGVVESAESVFLT--MPYVDSVSWNAMIAALAQHGHGVKAIEL 511
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMA 291
F +M + PD IT+L +L+AC H GL+KE ++FD + + G+TP +HYA ++D++
Sbjct: 512 FEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITPGEDHYARLIDLLC 571
Query: 292 RAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG 351
RAG +A + +P + A + ALL GC HG ++L +L+EL P QDG Y+
Sbjct: 572 RAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQAADRLLELIPGQDGTYII 631
Query: 352 LSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMM 411
LSN+YA +WD+ +R M GVKK PG S+VE+ +H F+ D HP + +Y
Sbjct: 632 LSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHVFLVDDARHPEVQAVYTY 691
Query: 412 LGFIVSQMKHIVDYENQEYYFYDNEGK 438
L +V++MK + + ++ +D E +
Sbjct: 692 LQQLVNEMKKLGYVPDTKFVLHDMESE 718
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 97/386 (25%), Positives = 179/386 (46%), Gaps = 62/386 (16%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
L + +L + + + + A+H +I +G++ + F+ N LI++Y +I ARK+FD
Sbjct: 6 LAYRYLTQLNHVSTTQIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDK 65
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE--QDVLSWSCLIDGYVRKGDYDEALA 128
IP ++V+ ++L Y+ G++ +A+Q+F+ P +D +S++ +I Y D AL
Sbjct: 66 IPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALN 125
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMY 187
+F +M+ G P+ T SVL A + + ++ +M+H VI L + +L+ Y
Sbjct: 126 LFVQMKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCY 185
Query: 188 AKCGA---------IQEALHVFRS--------------------------------GLMK 206
C + + A VF GL
Sbjct: 186 VCCASSPLVKSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTY 245
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
P DV WN+MI G+ GL +E+ D F MH +G++ DE TY +L+SAC G E
Sbjct: 246 PIDV-AWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISAC---GSCNEKMG 301
Query: 267 FFDCLGKN-------GMTPKSEHYA-----CMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
F+C G+ + S H+ ++ + ++ EA + ++P++ S
Sbjct: 302 MFNC-GRQVHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISW 360
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIE 340
A+L+G +N +++ A ++ ++ E
Sbjct: 361 -NAVLSGYVNAQRIEEANSIFSEMPE 385
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 151/327 (46%), Gaps = 28/327 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLA-IHGYITKAGYESDRFVSNSLIHMY---- 55
M R G PD TF + A + + E +H + K G V+N+L+ Y
Sbjct: 130 MKRYGFLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCA 189
Query: 56 -----SSFRDIPNARKVFDGIPVKNLV---SWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
S + + +ARKVFD P KN + SW +M+ GY + D+ AR++ D +
Sbjct: 190 SSPLVKSSQLMASARKVFDETP-KNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPID 248
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA----HLGALDKGRM 163
++W+ +I GYVR+G Y+EA F M G + +E T S++ AC +G + GR
Sbjct: 249 VAWNAMISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQ 308
Query: 164 MHHYVIDNELP----LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+H Y++ + L + +L+ Y K + EA VF M D+ WN+++ G
Sbjct: 309 VHGYILRTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDK--MPVRDIISWNAVLSG 366
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+ ++E+ +FSEM + + +T+ ++S A G +E F+ + G+ P
Sbjct: 367 YVNAQRIEEANSIFSEMP----ERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPC 422
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQI 306
+A + + G + Q Q+
Sbjct: 423 DYAFAGAITACSVLGSLDNGQQIHSQV 449
>IMGA|Medtr4g129330.1 Protein of unknown function DUF177
chr04_pseudomolecule_IMGAG_V3 30737366-30730605 E
EGN_Mt090430 20090702
Length = 1189
Score = 291 bits (744), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 160/437 (36%), Positives = 250/437 (57%), Gaps = 36/437 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV PD T + A AC + G +H Y+ K G S+ V+N+LI+MY
Sbjct: 669 MQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMY----- 723
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG + AR VF +P +D++SW+ +I GY +
Sbjct: 724 --------------------------AKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQN 757
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+EAL +F +M+ KP+++TM VL ACA L ALDKGR +H +++ L +
Sbjct: 758 SLPNEALELFLDMQ-KQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVA 816
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LVDMYAKCG + A +F ++ D+ W MI G+ HG E++ F+EM I G
Sbjct: 817 CALVDMYAKCGLLVLAQLLF--DMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAG 874
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
++PDE ++ +L+AC+H GL+ E W FF+ + + G+ PK EHYAC+VD++AR G +++A
Sbjct: 875 IEPDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKA 934
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+F+ +PI+P ++ G LL+GC H + LAE V + ELEP YV L+NVYA
Sbjct: 935 YKFIESMPIKPDTTIWGVLLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEA 994
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+W++ + +R+ M++ G K++PG S++E+ G + FVA + HP +++I ++L + QM
Sbjct: 995 EKWEEVKKLRKRMQKRGFKQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQM 1054
Query: 420 KHIVDYENQEYYFYDNE 436
++ DY + Y NE
Sbjct: 1055 QN-EDYFSMFRYVLINE 1070
Score = 155 bits (391), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 107/319 (33%), Positives = 163/319 (51%), Gaps = 58/319 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +GV D T + A A + LG A+HG+ KA + + SN+L
Sbjct: 568 MLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTL--------- 618
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y+KCG+++ A +VF M + ++SW+ I YVR+
Sbjct: 619 ----------------------LDMYSKCGNLNGATEVFVKMGDTTIVSWTSTIAAYVRE 656
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y +A+ +F+EM+ G +P+ T+ S++ ACA +LDKGR +H YVI N + L +
Sbjct: 657 GLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVT 716
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MYAKCG+++EA VF +K D+ WN+MIGG++ + L E+L+LF +M
Sbjct: 717 NALINMYAKCGSVEEARLVFSKIPVK--DIVSWNTMIGGYSQNSLPNEALELFLDMQ-KQ 773
Query: 241 VKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYAC-MVD 288
KPD+IT +L ACA HG +++ YF D H AC +VD
Sbjct: 774 FKPDDITMACVLPACAGLAALDKGREIHGHILRRG-YFSDL-----------HVACALVD 821
Query: 289 VMARAGQVAEAYQFLCQIP 307
+ A+ G + A IP
Sbjct: 822 MYAKCGLLVLAQLLFDMIP 840
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 154/384 (40%), Gaps = 77/384 (20%)
Query: 22 CLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSW 79
C K+ L G +H I G D + L+ MY + D+ RK+FD I + W
Sbjct: 385 CAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMNDKVFLW 444
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSC----------------------- 112
N ++ YAK G+ + +F M + V+ +++C
Sbjct: 445 NLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRVHGYVLK 504
Query: 113 ------------LIDGYVRKGDYDEALAVFEEMR-------------------------- 134
LI Y + G + A +F+E+
Sbjct: 505 LGFGSNTAVVNSLIAAYFKFGGVESAHNLFDELSEPDVVSWNSMINGCVVNGFSGNGLEI 564
Query: 135 -----VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
+ G + + T+VSVL A A++G L GR +H + + +V +L+DMY+K
Sbjct: 565 FIQMLILGVEVDLTTLVSVLVAWANIGNLSLGRALHGFGVKACFSEEVVFSNTLLDMYSK 624
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
CG + A VF M + + W S I + GL +++ LF EM GV+PD T
Sbjct: 625 CGNLNGATEVFVK--MGDTTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVT 682
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+++ ACA + + + KNGM ++++ A+ G V EA +IP++
Sbjct: 683 SIVHACACSSSLDKGRDVHSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK 742
Query: 310 PTAS---MLGALLNGCMNHGKLDL 330
S M+G + + L+L
Sbjct: 743 DIVSWNTMIGGYSQNSLPNEALEL 766
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 112/215 (52%), Gaps = 8/215 (3%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG-----YAKCGDISMARQVFDLMPE 104
S++ + + + + + ++V I + N +S + L Y CGD+ R++FD +
Sbjct: 380 SVLQLCAEKKSLEDGKRVHSVI-ISNGISIDEALGAKLVFMYVNCGDLVQGRKIFDKIMN 438
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
V W+ L+ Y + G++ E++++F++M+ G N T VL A LG + + + +
Sbjct: 439 DKVFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFTCVLKCFAALGKVKECKRV 498
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
H YV+ + SL+ Y K G ++ A ++F L +P DV WNSMI G +G
Sbjct: 499 HGYVLKLGFGSNTAVVNSLIAAYFKFGGVESAHNLFDE-LSEP-DVVSWNSMINGCVVNG 556
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
L++F +M I+GV+ D T +++L A A+ G
Sbjct: 557 FSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIG 591
>IMGA|Medtr8g079150.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 16403799-16405700 E
EGN_Mt090430 20090702
Length = 633
Score = 288 bits (738), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 160/419 (38%), Positives = 253/419 (60%), Gaps = 7/419 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITK--AGYESDRFVSNSLIHMYSSF 58
M V V PD TF L + L +G +HG + + + + + N L+ MY+
Sbjct: 210 MRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVYRELGCFGGNVLLVNKLVDMYAKC 269
Query: 59 RDIPNARKVFDGI-PVKNLVS-WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ A V + P K++V+ W S++ YA G++ +AR++FD M E+DV+SW+ +I G
Sbjct: 270 GRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQMGERDVVSWTAMISG 329
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH-HYVIDN-ELP 174
Y G + EAL +F ++ G KP+EV +V+ L ACA LGAL+ GR +H Y +N
Sbjct: 330 YSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELGRRIHRQYAGENWTCS 389
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ +++VDMYAKCG+I AL VFR F++NS+I G A HG + + +LF
Sbjct: 390 INRGFTSAVVDMYAKCGSIDIALDVFRKTSDDKKTTFLYNSIISGLAHHGRGEYAKNLFE 449
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARA 293
EM ++G+KPD IT++ +LSAC H GLV F+ + G++P+ EHY CMVD++ RA
Sbjct: 450 EMGLLGLKPDNITFVAVLSACGHCGLVDFGKKLFESMFTVYGVSPEMEHYGCMVDLLGRA 509
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G + EA++ + ++P + A + ALL+ C HG + LA +L+EL+ YV LS
Sbjct: 510 GHLDEAHRLILKMPFKANAVIWRALLSACKVHGDVALARVASYELVELQHDHGAGYVMLS 569
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
N+ + + D+A S+R+A++ +G++K PG+S+VEM+ +LH+F+A DKSHP ++ +ML
Sbjct: 570 NMLSDTDQHDEAASLRKAIDNVGIQKPPGWSYVEMNRSLHKFLAGDKSHPEAKTTELML 628
Score = 141 bits (356), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 117/393 (29%), Positives = 182/393 (46%), Gaps = 91/393 (23%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLL--KRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
ML V PD TFPFL KA A +L + G +H ++ + G+ SD FV+N+L++ Y F
Sbjct: 107 MLNSSVLPDSFTFPFLLKACANVLISAPQFGFQVHCHVLRNGFGSDVFVNNALLNFYCGF 166
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
D+ NA KVFD V++ VS+N+M++G+A+ GD+S G
Sbjct: 167 GDVVNAYKVFDESFVRDCVSFNTMINGFARKGDVS----------------------GCF 204
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL--- 175
R VF EMR +P+E T V++L C+ L GR +H V EL
Sbjct: 205 R---------VFGEMRGVCVRPDEYTFVALLSGCSVLEDYRIGRQVHGLVY-RELGCFGG 254
Query: 176 TLVLRTSLVDMYAKCGAI---QEALHVFRSG----------------------------L 204
++L LVDMYAKCG + + L V + G
Sbjct: 255 NVLLVNKLVDMYAKCGRLVMAETVLSVVKPGKSVVAAWTSLVSAYALRGEVKVARRLFDQ 314
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK-- 262
M DV W +MI G++ G +E+L+LF ++ +G+KPDE+ + LSACA G ++
Sbjct: 315 MGERDVVSWTAMISGYSHAGCFQEALELFVKLEGLGMKPDEVAVVAALSACARLGALELG 374
Query: 263 ---------EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ-FLCQIPIQPTA 312
E W C G T + +VD+ A+ G + A F + T
Sbjct: 375 RRIHRQYAGENW---TCSINRGFT------SAVVDMYAKCGSIDIALDVFRKTSDDKKTT 425
Query: 313 SMLGALLNGCMNHGKLDLAETVGRK--LIELEP 343
+ ++++G +HG+ + A+ + + L+ L+P
Sbjct: 426 FLYNSIISGLAHHGRGEYAKNLFEEMGLLGLKP 458
>IMGA|Medtr1g071450.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 14373767-14375808 H
EGN_Mt090430 20090702
Length = 490
Score = 286 bits (733), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 166/453 (36%), Positives = 247/453 (54%), Gaps = 48/453 (10%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
+++G P+ TF + + L LG IH I K YE FV +SL
Sbjct: 7 IKIGTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSL---------- 56
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
LD YAK G I AR VF+ +PE+DV+S + +I GY + G
Sbjct: 57 ---------------------LDMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLG 95
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
+EAL +F ++ G K N VT VL A + L ALD G+ +H++V+ +E+P +VL+
Sbjct: 96 LDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQN 155
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVG 240
SL+DMY+KCG + + +F + M V WN+M+ G++ HG +E L LF+ M
Sbjct: 156 SLIDMYSKCGNLTYSRRIFDT--MYERTVISWNAMLVGYSKHGEGREVLKLFTLMREETK 213
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL--GKNGMTPKSEHYACMVDVMARAGQVAE 298
VKPD +T L +LS C+HGGL + F+ + GK + PK EHY C+VD++ R+G+V E
Sbjct: 214 VKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEE 273
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A++F+ ++P +PTA++ G+LL C H +D+ E G++L+E+EP G YV LSN+YA
Sbjct: 274 AFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYAS 333
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
RW+ S+R+ M + V K PG S +E+ LH F A D+SHP E+I M + + +
Sbjct: 334 AGRWEDVSSLRDLMLKKTVTKEPGRSSIELDQVLHTFHASDRSHPRREEICMKVKELSTS 393
Query: 419 MK------------HIVDYENQEYYFYDNEGKL 439
K H VD E +E + KL
Sbjct: 394 FKEVGYVPDLSCVLHDVDEEQKEKILLGHSEKL 426
>IMGA|Medtr7g084500.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 18259214-18255069 H
EGN_Mt090430 20090702
Length = 763
Score = 285 bits (729), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 145/374 (38%), Positives = 227/374 (60%), Gaps = 5/374 (1%)
Query: 21 ACLLKRELGL--AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS 78
AC + E G+ A+ YI + E D ++ N+LI MY + AR+VFD + +N+VS
Sbjct: 380 ACTVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVS 439
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
WN+M+ GY K G++ AR++FD MP +DV+SW+ +I Y + G + +A+ +F+EM V+
Sbjct: 440 WNAMIMGYGKAGNLVAARKLFDDMPHRDVISWTSMISSYSQAGQFGKAVRLFQEMMVTKV 499
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KP+E+T+ SVL ACAH+GALD G +H Y+ ++ + + +L+DMY KCGA+++ L
Sbjct: 500 KPDEITVASVLSACAHIGALDVGEAVHEYIRKYDVNADIYVGNALIDMYCKCGAVEKGLS 559
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF M D W S+I G A +G +L+LFS M GV+P T++ +L ACAH
Sbjct: 560 VFEE--MGKRDSVSWTSVIAGLAVNGSADSALNLFSLMLREGVRPTHGTFVGVLLACAHA 617
Query: 259 GLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
G+V + +F+ + + G+TP+ +HY C+VD+++R+G + AY+F+ ++P+ P +
Sbjct: 618 GVVDKGLEYFESMERVYGLTPEMKHYGCVVDLLSRSGNLGRAYEFIKRMPMDPDVVVWRI 677
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
LL+ HG L LAE +KL+E +P G Y+ SN YA RW+ MR ME V
Sbjct: 678 LLSASQVHGNLHLAEIATKKLLETDPSNSGNYILSSNTYAGSNRWEDVIKMRRLMEESNV 737
Query: 378 KKSPGYSFVEMHGA 391
K S VE++ +
Sbjct: 738 HKPSASSSVEINDS 751
Score = 144 bits (364), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 118/408 (28%), Positives = 186/408 (45%), Gaps = 69/408 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +F ++LT+PFL KA A + +H + K G++SD FVSN+LIH Y+ F +
Sbjct: 262 MYSQALFGNNLTYPFLLKACARISNVSCT-TVHARVLKLGFDSDLFVSNALIHGYAGFCE 320
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ARKVFD + ++LVSWNS++ GY +C R+
Sbjct: 321 LGFARKVFDEMSERDLVSWNSLICGYGRC-----------------------------RR 351
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
Y E L VFEEMR++ K + VTMV V+ AC LG M Y+ +N++ + + L
Sbjct: 352 --YSEVLVVFEEMRMADVKGDAVTMVKVVLACTVLGEWGVVDAMIEYIEENKVEVDVYLG 409
Query: 181 TSLVDMYAKCGAIQEALHVF-------------------RSGL----------MKPSDVF 211
+L+DMY + + A VF ++G M DV
Sbjct: 410 NTLIDMYGRRSMVDLARRVFDRMRDRNMVSWNAMIMGYGKAGNLVAARKLFDDMPHRDVI 469
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
W SMI ++ G +++ LF EM + VKPDEIT ++LSACAH G + + +
Sbjct: 470 SWTSMISSYSQAGQFGKAVRLFQEMMVTKVKPDEITVASVLSACAHIGALDVGEAVHEYI 529
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI----PIQPTASMLGALLNGCMNHGK 327
K + ++D+ + G V + ++ + T+ + G +NG +
Sbjct: 530 RKYDVNADIYVGNALIDMYCKCGAVEKGLSVFEEMGKRDSVSWTSVIAGLAVNGSADSA- 588
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
L+L + R+ + G +VG+ A DK E+MER+
Sbjct: 589 LNLFSLMLREGVR---PTHGTFVGVLLACAHAGVVDKGLEYFESMERV 633
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 112/271 (41%), Gaps = 9/271 (3%)
Query: 77 VSWNSMLDGYA-KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
+S ++L YA +I A ++F +P + W+ +I G+ + EA+ + M
Sbjct: 205 ISIFNLLKSYALSPTNILKANELFRQIPRPTLSHWNIMIRGWSQTNQPIEAIRNYNLMYS 264
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
N +T +L ACA + + +H V+ L + +L+ YA +
Sbjct: 265 QALFGNNLTYPFLLKACARISNV-SCTTVHARVLKLGFDSDLFVSNALIHGYAGFCELGF 323
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A VF M D+ WNS+I G+ E L +F EM + VK D +T + ++ AC
Sbjct: 324 ARKVFDE--MSERDLVSWNSLICGYGRCRRYSEVLVVFEEMRMADVKGDAVTMVKVVLAC 381
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
G + + +N + ++D+ R V A + ++ + S
Sbjct: 382 TVLGEWGVVDAMIEYIEENKVEVDVYLGNTLIDMYGRRSMVDLARRVFDRMRDRNMVSW- 440
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
A++ G G L RKL + PH+D
Sbjct: 441 NAMIMGYGKAGNL----VAARKLFDDMPHRD 467
>IMGA|Medtr7g096840.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 21759923-21757505 H
EGN_Mt090430 20090702
Length = 672
Score = 283 bits (723), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 225/372 (60%), Gaps = 8/372 (2%)
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+K F+G L N+++D YAKCG+IS++R+VFD M E DV SW+ LI Y + G
Sbjct: 226 KKGFEGC----LAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSV 281
Query: 125 EALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EA ++F +M G + N VT+ +VL ACAH GAL G+ +H V+ EL LV+ TS+
Sbjct: 282 EAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSI 341
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VDMY KCG ++ A F +K +V W M+ G+ HG KE++ +F EM G+KP
Sbjct: 342 VDMYCKCGRVEMARKAFDR--LKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKP 399
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
+ IT++++L+AC+H GL+KE W++F+ + + + P EHY+CMVD++ RAG + EAY
Sbjct: 400 NYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGL 459
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
+ ++ ++P + G+LL C H ++L E RKL +L+P G YV LSN+YA RW
Sbjct: 460 IQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADAGRW 519
Query: 363 DKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
D MR M+ G+ K+PGYS VE G +H F+ DK HP E+IY L + +++ +
Sbjct: 520 DDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKLQEV 579
Query: 423 VDYENQEYYFYD 434
N YD
Sbjct: 580 GYMPNVTSVLYD 591
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/300 (31%), Positives = 144/300 (48%), Gaps = 23/300 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++ + P+ TFP K+ + L G IH GY SD FV+++LI MYS
Sbjct: 77 MRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKCGY 136
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARK+FD IP +N+VSW SM+ GY + AR+ L E L+D +
Sbjct: 137 LNDARKLFDEIPERNVVSWTSMISGYVQ---NERAREAVFLFKE------FLLVD----E 183
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
DYD E+ G + V + V+ ACA + +H + L +
Sbjct: 184 TDYD-------EIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKGFEGCLAVG 236
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+D YAKCG I + VF M+ +DV WNS+I +A +GL E+ LFS+M G
Sbjct: 237 NTLMDAYAKCGEISVSRKVFDG--MEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRG 294
Query: 241 -VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
V+ + +T +L ACAH G ++ D + K + +VD+ + G+V A
Sbjct: 295 EVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMA 354
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 137/325 (42%), Gaps = 51/325 (15%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+ + V SW+ +I + R GD +AL F MR PN T + +C+ L L G
Sbjct: 46 VDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAG 105
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H + + ++L+DMY+KCG + +A +F + +V W SMI G+
Sbjct: 106 KQIHQQAFVFGYGSDIFVASALIDMYSKCGYLNDARKLFDE--IPERNVVSWTSMISGYV 163
Query: 222 CHGLVKESLDLFSEMHIVG-VKPDEITYLN----------LLSACA-----------HGG 259
+ +E++ LF E +V DEI + ++SACA HG
Sbjct: 164 QNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGL 223
Query: 260 LVKEAW--------YFFDCLGKNGMTPKSEH------------YACMVDVMARAGQVAEA 299
VK+ + D K G S + ++ V A+ G EA
Sbjct: 224 AVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEA 283
Query: 300 YQFLCQI----PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS-- 353
+ + ++ A L A+L C + G L + + + +++++E +D VG S
Sbjct: 284 FSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMEL-EDNLVVGTSIV 342
Query: 354 NVYAIFRRWDKARSMREAMERMGVK 378
++Y R + AR + ++R VK
Sbjct: 343 DMYCKCGRVEMARKAFDRLKRKNVK 367
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 97/228 (42%), Gaps = 35/228 (15%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
++G IH + K E + V S++ MY + ARK FD + KN+ SW M+ GY
Sbjct: 317 QIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGY 376
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
G EA+ VF EM G KPN +T V
Sbjct: 377 G-------------------------------MHGHGKEAMKVFYEMIRCGIKPNYITFV 405
Query: 147 SVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
SVL AC+H G L +G + + ++ + + +VD+ + G ++EA + + +
Sbjct: 406 SVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEAYGLIQEMKV 465
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
KP D +W S++G H V+ L S + + P Y LLS
Sbjct: 466 KP-DFIVWGSLLGACRIHKNVE--LGEISARKLFKLDPSNCGYYVLLS 510
>IMGA|Medtr4g134470.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 32437523-32435263 E
EGN_Mt090430 20090702
Length = 616
Score = 281 bits (720), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 157/446 (35%), Positives = 254/446 (56%), Gaps = 15/446 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR-ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
ML V P TF L LLK LG +H + G+ +D +V N++IHMY F
Sbjct: 103 MLNNNVSPVSFTFSALFS----LLKNPSLGSQLHLHAFLFGFVNDLYVGNTIIHMYVKFG 158
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ ARKVFD +P +++V+W ++ YA+ GD+ A ++F +P +D+++W+ ++ GY +
Sbjct: 159 VLDCARKVFDEMPHRDVVTWTELIVAYARSGDMDSACELFVGLPVKDMVAWTSMVTGYSQ 218
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL--PLTL 177
+AL F +MR +G +E+T+V + ACA LG + + +
Sbjct: 219 NAMPKKALQFFRKMREAGVVTDEITLVGAISACAQLGVSGYADWIREIAESSRFGSGSNV 278
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ ++L+DMY+KCG ++EA +VF+ MK +VF ++SMI GFA HG + ++ LF EM
Sbjct: 279 FVGSALIDMYSKCGNVEEAYNVFKG--MKEMNVFSYSSMIVGFAVHGRARSAIKLFYEML 336
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQV 296
G+KP+ +T++ L +AC+H G+V++ F + + G++P ++HYACM D++ RAG +
Sbjct: 337 ENGIKPNHVTFVGLFTACSHAGMVEQGQQLFGAMKECYGVSPTADHYACMADLLGRAGHL 396
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
+A Q + +P++P + GALL HG D+AE R L ELEP G Y+ LS Y
Sbjct: 397 EKALQLVQTMPMEPNGGVWGALLGASHIHGNPDVAEIASRSLFELEPDNLGNYLLLSKTY 456
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEM-HGALHRFVAHDKSHPSSEQIYMMLGFI 415
A+ +WD +R+ M ++K+PG S+VE +G +H F A D HP +I L +
Sbjct: 457 ALAAKWDDVSRVRKLMREKQLRKNPGCSWVEAKNGIIHEFFAGDVKHPEINEIKKALDDL 516
Query: 416 VSQMKHIVDYE---NQEYYFYDNEGK 438
+ ++K Y+ N Y D+EGK
Sbjct: 517 LQRLK-CTGYQPKLNSVPYDIDDEGK 541
>IMGA|Medtr8g119600.1 Pancreatic ribonuclease
chr08_pseudomolecule_IMGAG_V3 27164284-27162028 H
EGN_Mt090430 20090702
Length = 738
Score = 280 bits (717), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 146/342 (42%), Positives = 214/342 (62%), Gaps = 5/342 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL N+++D Y KCG+ +AR++FD + E+DV+SW+ +I GY Y+EALA+FE M
Sbjct: 297 NLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVML 356
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAI 193
S KPN+VT + +L ACA LGALD G+ +H Y+ N L TSL+DMYAKCG I
Sbjct: 357 RSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCI 416
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV-KPDEITYLNLL 252
+ A VFRS M ++ WN+M+ GFA HG + +L LFSEM G+ +PD+IT++ +L
Sbjct: 417 EAAERVFRS--MHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVL 474
Query: 253 SACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
SAC GLV +F + ++ G++PK +HY CM+D++ARA + EA + + ++P
Sbjct: 475 SACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPD 534
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA 371
++ G+LL+ C HG+++ E V +L +LEP G +V LSN+YA RWD +R
Sbjct: 535 GAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLSNIYAGAGRWDDVARIRTR 594
Query: 372 MERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
+ G+KK PG + +E+ G +H F+ DK HP IY ML
Sbjct: 595 LNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLN 636
Score = 187 bits (474), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 113/332 (34%), Positives = 181/332 (54%), Gaps = 4/332 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML GV P+ TFPFL K+ G +H + K + V S+IHMY+S +
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGE 181
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR VFD +++ VS+ +++ GY G + AR++FD +P +DV+SW+ +I GYV+
Sbjct: 182 MDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQS 241
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++EA+ F EM+ + PN+ TMV VL AC H + + G+ + +V DN L L
Sbjct: 242 GRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLT 301
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KCG A +F ++ DV WN+MIGG++ L +E+L LF M
Sbjct: 302 NALIDMYCKCGETDIARELFDG--IEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRSN 359
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
VKP+++T+L +L ACA G + + + KN + + + ++D+ A+ G + A
Sbjct: 360 VKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAA 419
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+ + + AS A+L+G HG + A
Sbjct: 420 ERVFRSMHSRNLASW-NAMLSGFAMHGHAERA 450
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 104/230 (45%), Gaps = 35/230 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKA-GYESDRFVSNSLIHMYSSFR 59
MLR V P+ +TF + A ACL +LG +H YI K S+ + SLI MY+
Sbjct: 355 MLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCG 414
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
I A +VF + +NL SWN+ML G+A
Sbjct: 415 CIEAAERVFRSMHSRNLASWNAMLSGFA-------------------------------M 443
Query: 120 KGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTL 177
G + ALA+F EM G +P+++T V VL AC G +D G +I D + L
Sbjct: 444 HGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKL 503
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
++D+ A+ +EA + ++ M+P D IW S++ HG V+
Sbjct: 504 QHYGCMIDLLARAEKFEEAEILMKNMEMEP-DGAIWGSLLSACKAHGRVE 552
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/304 (22%), Positives = 113/304 (37%), Gaps = 61/304 (20%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IH I K G + FV + LIH + + GD
Sbjct: 47 IHSLIIKTGLNNTVFVQSKLIHFCA-----------------------------VSPSGD 77
Query: 92 ISMARQVFDLMPE---QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
+S A +F+ + +V W+ LI GY +L +F M G +PN T +
Sbjct: 78 LSYALSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFL 137
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+C A +G+ +H + + L + TS++ MYA G + A VF ++ +
Sbjct: 138 FKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDA 197
Query: 209 -----------------------------DVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
DV WN+MI G+ G +E++ F EM
Sbjct: 198 VSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEA 257
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
V P++ T + +LSAC H + + + NG + ++D+ + G+ A
Sbjct: 258 NVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIA 317
Query: 300 YQFL 303
+
Sbjct: 318 RELF 321
>IMGA|Medtr7g010380.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 2238621-2237062 E
EGN_Mt090430 20090702
Length = 519
Score = 280 bits (717), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 160/412 (38%), Positives = 230/412 (55%), Gaps = 35/412 (8%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSN------------------- 49
D TFPF+ KA L G A+HG + + G+ S+ V N
Sbjct: 107 DSYTFPFVLKACTRLFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLF 166
Query: 50 ------------SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQ 97
SLI Y+ D+ ARK+F+ +P ++LVSWN M+ GY K G++ AR
Sbjct: 167 DDSCKGDVVAWSSLIAGYARRGDLKVARKLFNEMPERDLVSWNVMITGYVKQGEMESARM 226
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA 157
+FD P +DV+SW+ +I GYV G +AL +F EM +G P+EVT++S+L ACA LG
Sbjct: 227 LFDEAPVKDVVSWNAMIAGYVVCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGD 286
Query: 158 LDKGRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
L+ G+ +H V++ + L+ +L +L+DMYAKCG I+E+L VF S + DV WNS+
Sbjct: 287 LENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCGNIKESLDVFWS--ITDKDVISWNSV 344
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-G 275
I G A HG KESL LF M + P+EIT++ +L AC+H G + E + +FD +
Sbjct: 345 IVGMALHGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEGYKYFDLMSSEYK 404
Query: 276 MTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVG 335
+ P H CMVD++ RAG + EA +F+ + I+P A + LL C HG ++LA+
Sbjct: 405 IEPNIRHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAIIWRTLLAACKVHGDVELAKVAN 464
Query: 336 RKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
KL + G YV +SN+YA WD A +R+ M+ GV K G SFVE
Sbjct: 465 EKLFSMRKDHSGDYVLMSNLYASRGEWDGAEKVRKLMDDSGVTKIRGSSFVE 516
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 36/230 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFR 59
M R GVFPD +T L A A L E G +H + + + + N+LI MY+
Sbjct: 262 MCRAGVFPDEVTLLSLLSACADLGDLENGKKVHAKVMEISMGKLSTLLGNALIDMYAKCG 321
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+I + VF I K+++SWNS++ G A
Sbjct: 322 NIKESLDVFWSITDKDVISWNSVIVGMA-------------------------------L 350
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G E+L++F+ M+ + PNE+T V VL AC+H G +D+G + ++ +E + +
Sbjct: 351 HGHGKESLSLFKMMQRTKICPNEITFVGVLVACSHAGEIDEG-YKYFDLMSSEYKIEPNI 409
Query: 180 R--TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
R +VDM + G ++EA S ++P+ + IW +++ HG V+
Sbjct: 410 RHCGCMVDMLGRAGLLKEAAKFIDSMKIEPNAI-IWRTLLAACKVHGDVE 458
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 130/279 (46%), Gaps = 11/279 (3%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A Q+F +P+ D ++ +I G + + A++++ EM K + T VL AC
Sbjct: 61 AHQLFAQIPQPDTFMYNVMIRGSSQSPNPLRAISLYTEMHRHFVKGDSYTFPFVLKACTR 120
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L ++ G +H V+ V+R +L+ +AKCG + A +F DV W+
Sbjct: 121 LFWVNTGSAVHGMVLRLGFGSNAVVRNTLLVFHAKCGDLNVATSLFDDSC--KGDVVAWS 178
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
S+I G+A G +K + LF+EM + D +++ +++ G ++ A FD
Sbjct: 179 SLIAGYARRGDLKVARKLFNEMP----ERDLVSWNVMITGYVKQGEMESARMLFDEAPVK 234
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
+ + A V V + Q E + +C+ + P L +LL+ C + G L+ + V
Sbjct: 235 DVVSWNAMIAGYV-VCGLSKQALELFNEMCRAGVFPDEVTLLSLLSACADLGDLENGKKV 293
Query: 335 GRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
K++E+ + +G A+ + K +++E+++
Sbjct: 294 HAKVMEISMGKLSTLLG----NALIDMYAKCGNIKESLD 328
>IMGA|Medtr2g110280.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 25861415-25859379 E
EGN_Mt090430 20090702
Length = 678
Score = 280 bits (716), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 171/507 (33%), Positives = 258/507 (50%), Gaps = 73/507 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + PD TF F+ KA A L LG+ IH + K G++ D FV +++ YS
Sbjct: 95 MHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGF 154
Query: 61 IPNARKVFDGIPVKNLVSWNSML--------------------------DGY-------- 86
+ +A KVFD + VKN+VSW M+ DG+
Sbjct: 155 LRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRA 214
Query: 87 -AKCGDISMARQVFDLMPE----QDVLSWSCLIDGYVRKGDYDEALAVFE---------- 131
A+ GD+ R + M E ++V + L+D Y + G +EA VF+
Sbjct: 215 CARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCW 274
Query: 132 ---------------------EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
EMR +P+ MV L +CA LGAL+ G +
Sbjct: 275 SAMIQGYASNGLPREAIELFFEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNY 334
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
E VL TSL+D YAKCG+++EAL V++ +MK D ++N++I G A +G V +
Sbjct: 335 EEFLSNPVLGTSLIDFYAKCGSMEEALGVYK--MMKEKDRVVFNAVISGLAMYGQVGAAF 392
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDV 289
+F +M G+ P+E T++ LL C H GLV + ++F+ + + +TP EHY CMVD+
Sbjct: 393 GVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDL 452
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
+ARAG + EA+ + +P++ + G+LL GC H + LAE V ++LIELEP G Y
Sbjct: 453 LARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHY 512
Query: 350 VGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIY 409
V LSN+Y+ RRWD+A +R + G++K PGYS+VE+ G +H F+ D SHP S++IY
Sbjct: 513 VLLSNIYSASRRWDEAEKIRSTVNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIY 572
Query: 410 MMLGFIVSQMKHIVDYENQEYYFYDNE 436
L + +K E+ +D E
Sbjct: 573 EKLESLFKDLKEAGYNPTTEFVLFDVE 599
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 111/230 (48%), Gaps = 4/230 (1%)
Query: 98 VFDLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
VF P + ++ +I G V K ++ A+ ++ M + P+ T VL ACA L
Sbjct: 59 VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
G M+H V + ++T++V Y+KCG +++A VF ++K +V W M
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVK--NVVSWTGM 176
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
I G G +E++DLF + G++PD + +L ACA G ++ + C+ + G+
Sbjct: 177 ICGCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGL 236
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ +VD+ + G + EA +F+ ++ A++ G ++G
Sbjct: 237 SRNVFVATSLVDMYTKCGSMEEA-RFVFDGMVEKDIVCWSAMIQGYASNG 285
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 100/230 (43%), Gaps = 15/230 (6%)
Query: 164 MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+HH DN+L L+++LR+++ Q + VF S+ F++N+MI G
Sbjct: 32 LHH---DNDL-LSIILRSTI----NFSNNAQYPILVFHKTPTN-SNTFLYNTMIRGMVSK 82
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
++ L++ MH + PD T+ +L ACA L + K G
Sbjct: 83 DRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTGFDCDVFVK 142
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
+V ++ G + +A++ + ++ S G ++ GC+ GK A + R L+E
Sbjct: 143 TNVVCFYSKCGFLRDAWKVFDDMVVKNVVSWTG-MICGCIEFGKFREAVDLFRGLLESGL 201
Query: 344 HQDGRYVGLSNVYAIFRRWD--KARSMREAMERMGVKKS--PGYSFVEMH 389
DG +V + + A R D R + M G+ ++ S V+M+
Sbjct: 202 RPDG-FVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMY 250
>IMGA|Medtr8g077580.1 Asp/Glu racemase chr08_pseudomolecule_IMGAG_V3
15476837-15474293 E EGN_Mt090430 20090702
Length = 665
Score = 280 bits (715), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 144/373 (38%), Positives = 226/373 (60%), Gaps = 4/373 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D + + LI Y +++ AR++FD +P ++ +SWN+ML+GYA G++ M +VFD
Sbjct: 204 ERDVVMWSVLISGYIESKNMAAARELFDKMPNRDTMSWNAMLNGYAVNGEVEMFEKVFDE 263
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDK 160
MPE++V SW+ LI GYV+ G + E L F+ M V G PN+ T+V+VL AC+ LGALD
Sbjct: 264 MPERNVFSWNGLIGGYVKNGLFSETLESFKRMLVEGHVIPNDFTLVAVLSACSRLGALDM 323
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G+ +H Y L + L+DMYAKCG I+ A+ VF + D+ WN++I G
Sbjct: 324 GKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAVVVFNC--LDRKDIISWNTIINGL 381
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPK 279
A HG ++L +F M G +PD +T++ +LSAC H GLVK+ + +F + + + P+
Sbjct: 382 AIHGHAPDALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQ 441
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
EHY CMVD++ RAG + +A F+ ++PI+P A + ALL C + +++AE ++LI
Sbjct: 442 IEHYGCMVDLLGRAGLLDQALNFIRKMPIEPDAVIWAALLGACRLYKNVEIAELALQRLI 501
Query: 340 ELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHD 399
ELEP+ +V +SN+Y R + ++ AM G +K PG S +E + ++ F + D
Sbjct: 502 ELEPNNPANFVMVSNIYKDLGRSEDVARLKIAMRDTGFRKLPGCSVIECNDSVVEFYSLD 561
Query: 400 KSHPSSEQIYMML 412
+ H +E IY +L
Sbjct: 562 ERHSETESIYRVL 574
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 100/219 (45%), Gaps = 41/219 (18%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ T + A + L ++G +H Y GY+ + FV N LI MY+ I NA
Sbjct: 301 VIPNDFTLVAVLSACSRLGALDMGKWVHVYAESIGYKGNLFVGNVLIDMYAKCGVIENAV 360
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
VF+ + K+++SWN++++G A G +
Sbjct: 361 VVFNCLDRKDIISWNTIINGLAI-------------------------------HGHAPD 389
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLR 180
AL +F+ M+ G +P+ VT V +L AC H+G + G M+ HY I ++
Sbjct: 390 ALGMFDRMKSEGEEPDGVTFVGILSACTHMGLVKDGFLYFKSMVDHYSIVPQIEHY---- 445
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+VD+ + G + +AL+ R ++P D IW +++G
Sbjct: 446 GCMVDLLGRAGLLDQALNFIRKMPIEP-DAVIWAALLGA 483
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 118/251 (47%), Gaps = 14/251 (5%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
I AR++FD +P+ + +W+ + GY++ G + + + +F E+ PN T ++ +
Sbjct: 60 IHHARKLFDKIPQPNTATWNAMFRGYLQNGHHRDTVVLFGELNRIAGMPNCFTFPMIIKS 119
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
C L + +G +H + + TSL+DMY+K G +++A VF G M +V
Sbjct: 120 CGKLEGVREGEEVHCCATKHGFKSNSFVATSLIDMYSKKGCVEDAYKVF--GEMHERNVV 177
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
+W ++I G+ G V LF + + D + + L+S + A FD +
Sbjct: 178 VWTAIINGYILCGDVVSGRRLFD----LAPERDVVMWSVLISGYIESKNMAAARELFDKM 233
Query: 272 -GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL-D 329
++ M+ + M++ A G+V + ++P + S G L+ G + +G +
Sbjct: 234 PNRDTMS-----WNAMLNGYAVNGEVEMFEKVFDEMPERNVFSWNG-LIGGYVKNGLFSE 287
Query: 330 LAETVGRKLIE 340
E+ R L+E
Sbjct: 288 TLESFKRMLVE 298
>IMGA|Medtr3g110100.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 27694377-27695837 H
EGN_Mt090430 20090702
Length = 486
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 155/392 (39%), Positives = 233/392 (59%), Gaps = 9/392 (2%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + PD +F FL K+ + + L IHG + K G+ V N+LIH+Y+
Sbjct: 98 MRRNSIAPDEFSFTFLLKSRSFTMP--LVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGV 155
Query: 61 IPNARKVF-DGIPVK---NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ARKVF D + V ++VSW+ +L +AK G++ +AR+VFD MPE+DV+SW+ ++
Sbjct: 156 TISARKVFEDAVRVGLDVDIVSWSGLLVAHAKAGELDVARKVFDGMPERDVVSWTIMLSA 215
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y + E L +F+EMR++G P+EVT++SV+ ACA LG + GRM+H +V +N
Sbjct: 216 YSKAKRPHETLDLFQEMRLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWM 275
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ L SL+DMY KCG ++EA VF K + WN+M+ A HG +++ LF M
Sbjct: 276 VALCNSLIDMYGKCGCLEEAWQVFDR--TKRKSLITWNAMMMVCANHGYAEDAFRLFEGM 333
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQ 295
GV PD +T L LL A AH G V E F+ + ++ G+ P+ EHY +VD++ R+G+
Sbjct: 334 IGSGVVPDGVTILALLVAYAHKGFVDEGIRLFESMQRDYGVEPRIEHYGAVVDMLGRSGR 393
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ EAY L +PI + GALL C HG + + E V +KL+EL+P + G Y+ L ++
Sbjct: 394 LQEAYNLLTSMPIPSNDVIWGALLGACRIHGDVGMGERVIKKLLELKPDEGGYYILLRDI 453
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
Y R +A MR+AM G +K+PG S+VE
Sbjct: 454 YVAAGRTAEANEMRQAMLASGARKNPGCSWVE 485
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 109/270 (40%), Gaps = 36/270 (13%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD+S A +FD MP+ ++ LI + + F MR + P+E + +L
Sbjct: 55 GDLSYAHNMFDQMPQPTTFFYNTLIRAHSHSTTPSFSSLFFNRMRRNSIAPDEFSFTFLL 114
Query: 150 CA--------------------CAHL-------------GALDKGRMMHHYVIDNELPLT 176
+ C HL G R + + L +
Sbjct: 115 KSRSFTMPLVHDIHGAVFKFGFCRHLHVQNALIHLYAVGGVTISARKVFEDAVRVGLDVD 174
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+V + L+ +AK G + A VF M DV W M+ ++ E+LDLF EM
Sbjct: 175 IVSWSGLLVAHAKAGELDVARKVFDG--MPERDVVSWTIMLSAYSKAKRPHETLDLFQEM 232
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
+ GV PDE+T L+++SACA G + + +NG ++D+ + G +
Sbjct: 233 RLAGVWPDEVTVLSVISACAELGDAEMGRMVHKFVEENGFGWMVALCNSLIDMYGKCGCL 292
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
EA+Q + + + A++ C NHG
Sbjct: 293 EEAWQVFDRTK-RKSLITWNAMMMVCANHG 321
>IMGA|Medtr6g070460.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 13306615-13308201 H
EGN_Mt090430 20090702
Length = 528
Score = 278 bits (711), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 150/430 (34%), Positives = 247/430 (57%), Gaps = 27/430 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS-FR 59
ML + P++ +P + K+ + +R L +H I K G+ + V SL+ YS
Sbjct: 94 MLNSNIRPNNFIYPHVLKS---VKERFLVDLVHAQIVKCGFLNYPVVETSLVDSYSKVLG 150
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+ +A KVFD + +N+V + ++ GY + GD+ VFD M ++DV +W+ +I G +
Sbjct: 151 GLRDAHKVFDEMSERNIVVFTVLVSGYLRVGDVEKGLMVFDEMVDRDVPAWNAVISGCTQ 210
Query: 120 KGDYDEALAVFEEMRVS----------GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
G + E + +F EM + G KPN+VT+V VL AC H G L G+ +H YV
Sbjct: 211 NGFFSEGIRLFREMVFAAGLGEGGFCKGNKPNQVTVVCVLSACGHGGMLQLGKWIHGYVY 270
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGL 225
+ + + +LVDMY KCG+++ A VF R GL WNSMI +A HG
Sbjct: 271 RHGFVVDSFVSNALVDMYGKCGSLELARKVFEMDQRKGLTS------WNSMINCYALHGK 324
Query: 226 VKESLDLFSEMHIVG--VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEH 282
++++ F +M G V+PDE+T++ LL+AC HGGLV++ +F+ + K G+ P+ H
Sbjct: 325 CEDAITFFEKMVECGGGVRPDEVTFIGLLNACTHGGLVEQGCGYFEMMIKEYGIEPQIAH 384
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
Y C++D++ RAGQ EA + + ++P + G+LLNGC HG+ DLAE +KL+E++
Sbjct: 385 YGCLIDLLGRAGQFDEAMDVVKGMSMEPDEVVWGSLLNGCKVHGRTDLAEFAAKKLVEID 444
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSH 402
PH G L+N+Y +WD+ R++ +++ K PG S++E+ +H+F + D+S+
Sbjct: 445 PHNGGYGTMLANIYGQLGKWDEMRNVWSKLKQQKSYKIPGCSWIEVDDKVHQFFSLDQSN 504
Query: 403 PSSEQIYMML 412
P +E++Y +L
Sbjct: 505 PKTEELYNIL 514
>IMGA|Medtr1g008660.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 862706-860384 E
EGN_Mt090430 20090702
Length = 736
Score = 278 bits (710), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 147/416 (35%), Positives = 229/416 (55%), Gaps = 6/416 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L G+ PD T + A + G IH G +S+ FV +L+ MY D
Sbjct: 306 LLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSNSFVGGALVEMYCKCND 365
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
I A+ FD I ++ +WN+++ GYA+C I R++ + M E +V +W+ ++ G
Sbjct: 366 IIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKSDGFEPNVYTWNSILAG 425
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
V YD A+ +F EM+VS +P+ T+ +L AC+ L + +G+ +H Y I
Sbjct: 426 LVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIHRGKQVHAYSIRAGYDSD 485
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ +LVDMYAKCG+I+ V+ + ++ N+M+ +A HG +E + +F M
Sbjct: 486 AHIGATLVDMYAKCGSIKHCYQVYNK--ISNPNLVCHNAMLTAYAMHGHGEEGIVIFRRM 543
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
V+PD +T+L++LS+C H G +K + F + +TP +HY CMVD+++RAG++
Sbjct: 544 LDSRVRPDHVTFLSVLSSCVHAGSIKIGYECFYLMETYNITPTLKHYTCMVDLLSRAGKL 603
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
EAYQ + +P++ + ALL GC H ++ L E KLIELEP G YV L+N+Y
Sbjct: 604 DEAYQLIKNMPMEADSVTWSALLGGCFIHKEVALGEIAAEKLIELEPSNTGNYVLLANLY 663
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
A RW RE M G++KSPG S++E +H F+A DKSH E+IY ML
Sbjct: 664 ASAGRWHDLAKTRELMNDKGMQKSPGCSWIEDRDGVHIFLASDKSHQRVEEIYFML 719
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 176/384 (45%), Gaps = 40/384 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD T + A + + +G +HGYI + S+ FV+N+L+ MY D
Sbjct: 170 MVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALVGMYRRCGD 229
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
+ +A K+F K S+N+M+ GY + G++ A+++F M E+D +SW+C+I G
Sbjct: 230 MKSAFKIFSKFARKCAASYNTMIVGYLENGNVGKAKELFYQMEQEGVERDRISWNCMISG 289
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+V +D+AL +F ++ + G +P+ T+ S+L A + + +G+ +H I L
Sbjct: 290 HVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGKEIHSIAIVKGLQSN 349
Query: 177 LVLRTSLVDMYAKC----------------------------------GAIQEALHVFRS 202
+ +LV+MY KC G I+E + +S
Sbjct: 350 SFVGGALVEMYCKCNDIIAAQMAFDEISERDTSTWNALISGYARCNQIGKIRELVERMKS 409
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
+P +V+ WNS++ G + ++ LF+EM + ++PD T +L+AC+ +
Sbjct: 410 DGFEP-NVYTWNSILAGLVENKQYDLAMQLFNEMQVSSLRPDIYTVGIILAACSKLATIH 468
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
+ G + A +VD+ A+ G + YQ +I P A+L
Sbjct: 469 RGKQVHAYSIRAGYDSDAHIGATLVDMYAKCGSIKHCYQVYNKIS-NPNLVCHNAMLTAY 527
Query: 323 MNHGKLDLAETVGRKLIELEPHQD 346
HG + + R++++ D
Sbjct: 528 AMHGHGEEGIVIFRRMLDSRVRPD 551
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 181/384 (47%), Gaps = 22/384 (5%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D FP + L ELG +HG + K G+ ++ +V N+LI MY + A+KV
Sbjct: 42 DFFVFPVVLNICCGLGDLELGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVL 101
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYD 124
+G+ K+ VSWNS++ G + A + + M E +V++WS +I G+
Sbjct: 102 EGMTQKDCVSWNSIITACVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDV 161
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E++ +F M +G P+ T+ SVL AC+ + L G+ +H Y++ +EL + +LV
Sbjct: 162 ESVELFARMVGAGVAPDARTLASVLPACSRMKWLFVGKELHGYIVRHELFSNGFVANALV 221
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY +CG ++ A +F K + + N+MI G+ +G V ++ +LF +M GV+ D
Sbjct: 222 GMYRRCGDMKSAFKIFSKFARKCAASY--NTMIVGYLENGNVGKAKELFYQMEQEGVERD 279
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA-----RAGQVAEA 299
I++ ++S + +A F L G+ P S ++ A R G+ E
Sbjct: 280 RISWNCMISGHVDNFMFDDALMLFRDLLMEGIEPDSFTLGSILTGFADMTCIRQGK--EI 337
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ +Q + + GAL+ + A+ E+ + L + YA
Sbjct: 338 HSIAIVKGLQSNSFVGGALVEMYCKCNDIIAAQMA---FDEISERDTSTWNALISGYA-- 392
Query: 360 RRWDKARSMREAMERMGVKKSPGY 383
R ++ +RE +ERM KS G+
Sbjct: 393 -RCNQIGKIRELVERM---KSDGF 412
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 4/193 (2%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG--PKPNEVTMVSVLCACAHLGALD 159
M +++ SW+ ++ ++ G + + +FEE G K + VL C LG L+
Sbjct: 1 MTLKNLHSWTAVLRLHLNMGLFYKGFMLFEEFLCDGLGEKLDFFVFPVVLNICCGLGDLE 60
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
GR +H V+ + + + +L+DMY KCG++ EA V M D WNS+I
Sbjct: 61 LGRQVHGMVLKHGFVTNVYVGNALIDMYGKCGSLDEAKKVLEG--MTQKDCVSWNSIITA 118
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+G+V E+LDL M + ++P+ +T+ ++ + E+ F + G+ P
Sbjct: 119 CVANGVVYEALDLLENMLLSELEPNVVTWSAVIGGFSSNAYDVESVELFARMVGAGVAPD 178
Query: 280 SEHYACMVDVMAR 292
+ A ++ +R
Sbjct: 179 ARTLASVLPACSR 191
>IMGA|Medtr7g088050.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 19023009-19021282 E
EGN_Mt090430 20090702
Length = 575
Score = 277 bits (709), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 239/394 (60%), Gaps = 13/394 (3%)
Query: 1 MLRVG-VFPDHLTFPFLAKASACLLKRELGLAIHGYIT-KAGYESDRFVSNSLIHMYSSF 58
ML G V PD T+ + + + L L +I + K G+ + FV +L+ M++
Sbjct: 185 MLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDMHAKC 244
Query: 59 RDIPNARKVFDGIPV---KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLID 115
++ A K+F+ + V ++ V WN+M+ YA+ GD+ A+ +FD MP++D +SW+ +I
Sbjct: 245 GNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVSWNSMIA 304
Query: 116 GYVRKGDYDEALAVFEEMRVS--GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
GY + G+ +A+ +FEEM S KP+EVTMVSV AC HLG L G + N +
Sbjct: 305 GYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLGELGLGNWAVSILKVNHI 364
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+++ + SL++MY++CG++Q+A+ +F+ M D+ +N++I GFA HG ES++L
Sbjct: 365 QISISVYNSLINMYSRCGSMQDAVLIFQE--MATRDLVSYNTLISGFAEHGHGMESIELL 422
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
S+M G++PD ITY+ +L+AC+H GL+ E F+ + P +HYACM+D++ RA
Sbjct: 423 SKMKEDGIEPDRITYIAILTACSHAGLLDEGQRLFESI----KFPDVDHYACMIDMLGRA 478
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G++ EA + + +P++P A + G+LLN H +++L E KL ++EPH G Y LS
Sbjct: 479 GRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAAAKLFKVEPHNSGNYALLS 538
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
N+YA RW + +R+ M + GVKK+ G S++E
Sbjct: 539 NIYASAGRWKEGDKVRDTMRKQGVKKTTGLSWLE 572
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 166/367 (45%), Gaps = 78/367 (21%)
Query: 34 GYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD-- 91
++ K+GY+ D +V N ++ +Y+ + I ARK+FD +P + + WN M+ GY KCG+
Sbjct: 51 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 110
Query: 92 ---------------------------------ISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ AR FD MPE+ V+SW+ ++ GY
Sbjct: 111 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYA 170
Query: 119 RKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLG--ALDKGRMMHHYVIDNELPL 175
+ G +E + +F +M G +P+E T +V+ +C+ LG L + + +D+++
Sbjct: 171 QGGAPEETIRLFNDMLSPGNVQPDETTWATVISSCSSLGDPCLSESIVRK---LDDKVGF 227
Query: 176 --TLVLRTSLVDMYAKCGAIQEALHVF--------RSGL--------------------- 204
++T+L+DM+AKCG ++ A +F RS +
Sbjct: 228 RPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAKHL 287
Query: 205 ---MKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAHGG 259
M D WNSMI G+ +G +++ LF EM KPDE+T +++ SAC H G
Sbjct: 288 FDKMPQRDTVSWNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFSACGHLG 347
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+ + L N + Y ++++ +R G + +A ++ + S L+
Sbjct: 348 ELGLGNWAVSILKVNHIQISISVYNSLINMYSRCGSMQDAVLIFQEMATRDLVS-YNTLI 406
Query: 320 NGCMNHG 326
+G HG
Sbjct: 407 SGFAEHG 413
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 128/283 (45%), Gaps = 12/283 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +L YAK G I AR++FD MP++ V W+ +I GY + G+ +EA +F M
Sbjct: 66 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 125
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
N +T +++ A G L RM D ++V +++ YA+ GA +E + +
Sbjct: 126 RNVITWTTMITGHAKKGNLKTARM----YFDKMPERSVVSWNAMLSGYAQGGAPEETIRL 181
Query: 200 FRS----GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSA 254
F G ++P D W ++I + G S + ++ VG +P+ LL
Sbjct: 182 FNDMLSPGNVQP-DETTWATVISSCSSLGDPCLSESIVRKLDDKVGFRPNYFVKTALLDM 240
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
A G ++ A F+ LG S + M+ AR G + A ++P + T S
Sbjct: 241 HAKCGNLEAAHKIFEQLGVYKYR-SSVPWNAMISAYARVGDLPSAKHLFDKMPQRDTVS- 298
Query: 315 LGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
+++ G +G+ A + ++I E + V + +V++
Sbjct: 299 WNSMIAGYTQNGESFKAIKLFEEMISSEDSRKPDEVTMVSVFS 341
>IMGA|Medtr1g100400.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 20827952-20829506 E
EGN_Mt090430 20090702
Length = 490
Score = 277 bits (709), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 141/384 (36%), Positives = 225/384 (58%), Gaps = 4/384 (1%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PD+ TFP L KA++ L +LG +H ++T G+ V L+ +YS+ + +A
Sbjct: 104 ILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEIGLLEVYSNCGKMEDAN 163
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KVFD + + +V WN M++G+ K GD+ + ++F M ++ V+SW+ +I ++ E
Sbjct: 164 KVFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKRMGQRSVVSWNLMISCLAQRKKDGE 223
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV-LRTSLV 184
A +F EM G +P++ T+V+VL CA LG +D G +H Y L ++ + SLV
Sbjct: 224 AFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDAGEWIHSYADGKGLLRKVISVGNSLV 283
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
D Y KCG ++ A VF M +V WN+MI G +G + ++LF +M GV P
Sbjct: 284 DFYCKCGNLEAAWKVFNE--MTKKNVVSWNAMISGLGLNGKGELGVELFEKMARKGVTPS 341
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ T++ +L+ CAH G V + FD + K ++PK EHY C+VD++ R G V EAY +
Sbjct: 342 DSTFVGVLACCAHAGFVDKGREIFDSMTVKFKLSPKLEHYGCVVDLLGRCGHVKEAYDLI 401
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P+ P A++ GALL+ C HG ++AE ++L+ LEP G YV LSNVYA R+W+
Sbjct: 402 RNMPLMPNAALWGALLSACRTHGDREVAEIAAKELVRLEPGNSGNYVLLSNVYAEERKWN 461
Query: 364 KARSMREAMERMGVKKSPGYSFVE 387
+ +R M+ +G+KK+PG S ++
Sbjct: 462 EVEKVRVLMQGVGIKKNPGQSALQ 485
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 143/354 (40%), Gaps = 26/354 (7%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IH + + G + + + + +S IP A +F+ N++ +NS++ ++
Sbjct: 28 IHAHFLRHGLHHSNQILSHFVSVCTSLHQIPYATTIFNHTHHPNILLFNSIIKAHSSFPP 87
Query: 92 ISMARQVFDLMPEQ-----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG---PKPNEV 143
+ F+LM D ++ L+ DYD + + G P E+
Sbjct: 88 FHQSFHFFNLMKMTHNILPDNFTFPPLLKATSYLRDYDLGQCLHAHVTALGFYRHSPVEI 147
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
++ V C + +K V D L +V+ +++ + K G ++ L +F+
Sbjct: 148 GLLEVYSNCGKMEDANK-------VFDEMLHREVVVWNIMINGFCKMGDLEIGLKLFKR- 199
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
M V WN MI A E+ +F EM G +PD+ T + +L CA G V
Sbjct: 200 -MGQRSVVSWNLMISCLAQRKKDGEAFGIFREMLEQGFEPDDATLVTVLPVCARLGDVDA 258
Query: 264 AWYFFDCLGKNGMTPKSEHYA-CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
+ G+ K +VD + G + A++ ++ + S A+++G
Sbjct: 259 GEWIHSYADGKGLLRKVISVGNSLVDFYCKCGNLEAAWKVFNEMTKKNVVSW-NAMISGL 317
Query: 323 MNHGK----LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
+GK ++L E + RK + D +VG+ A DK R + ++M
Sbjct: 318 GLNGKGELGVELFEKMARKGV---TPSDSTFVGVLACCAHAGFVDKGREIFDSM 368
>IMGA|Medtr7g088110.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 19042574-19039132 E
EGN_Mt090430 20090702
Length = 646
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/352 (38%), Positives = 221/352 (62%), Gaps = 10/352 (2%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV---KNLVSWNSMLDGYAKCGDISMAR 96
G+ + FV +L+ M++ ++ A K+F+ + V ++ V WN+M+ YA+ GD+ AR
Sbjct: 298 GFRPNYFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSAR 357
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHL 155
+FD MP++D +SW+ +I GY + G+ +A+ +FEEM S KP+EVTMVSV AC HL
Sbjct: 358 HLFDKMPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHL 417
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNS 215
G L G + +N + +++ + SL+ MY++CG++Q+A+ +F+ M D+ +N+
Sbjct: 418 GELGLGNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQE--MATRDLVSYNT 475
Query: 216 MIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNG 275
+I GFA HG ES++L +M G++PD ITY+ +L+AC+H GL+ E F+ +
Sbjct: 476 LISGFAEHGHGMESIELLLKMKEDGIEPDRITYIAILTACSHAGLLGEGQRLFESIK--- 532
Query: 276 MTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVG 335
P +HYACM+D++ RAG++ EA + + +P++P A + G+LLN H +++L E
Sbjct: 533 -FPDVDHYACMIDMLGRAGRLEEAMKLIQSMPMEPHAGIYGSLLNATSIHKQVELGELAA 591
Query: 336 RKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
KL ++EPH G YV LSN+YA RW +R+ M + GVKK+ G S++E
Sbjct: 592 AKLFKVEPHNSGNYVLLSNIYASAGRWKDGDKVRDTMRKQGVKKTTGLSWLE 643
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 162/363 (44%), Gaps = 71/363 (19%)
Query: 34 GYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD-- 91
++ K+GY+ D +V N ++ +Y+ + I ARK+FD +P + + WN M+ GY KCG+
Sbjct: 123 AHVLKSGYDRDHYVRNGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEE 182
Query: 92 ---------------------------------ISMARQVFDLMPEQDVLSWSCLIDGYV 118
+ AR FD MPE+ V+SW+ ++ GY
Sbjct: 183 EASTLFHVMGDQEISRNVITWTTMITGHAKKGNLKTARMYFDKMPERSVVSWNAMLSGYA 242
Query: 119 RKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLT 176
+ G +E + +F +M G +P+E T V+V+ +C+ LG + + D
Sbjct: 243 QGGAPEETIRLFNDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPN 302
Query: 177 LVLRTSLVDMYAKCGAIQEALHVF--------RSGL------------------------ 204
++T+L+DM+AKCG ++ A +F RS +
Sbjct: 303 YFVKTALLDMHAKCGNLEAAHKIFEQLGVYKYRSSVPWNAMISAYARVGDLPSARHLFDK 362
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKE 263
M D WNSMI G+ +G +++ LF EM KPDE+T +++ SAC H G +
Sbjct: 363 MPQRDTVSWNSMIAGYTQNGESVKAIKLFEEMISSEDSKPDEVTMVSVFSACGHLGELGL 422
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
+ L +N + Y ++ + +R G + +A ++ + S L++G
Sbjct: 423 GNWAVSILKENHIQISISVYNSLISMYSRCGSMQDAVLIFQEMATRDLVS-YNTLISGFA 481
Query: 324 NHG 326
HG
Sbjct: 482 EHG 484
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 116/253 (45%), Gaps = 12/253 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +L YAK G I AR++FD MP++ V W+ +I GY + G+ +EA +F M
Sbjct: 138 NGILGIYAKYGPIEFARKLFDEMPDRTVADWNVMISGYWKCGNEEEASTLFHVMGDQEIS 197
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
N +T +++ A G L RM D ++V +++ YA+ GA +E + +
Sbjct: 198 RNVITWTTMITGHAKKGNLKTARM----YFDKMPERSVVSWNAMLSGYAQGGAPEETIRL 253
Query: 200 FRSGLMKPSDV----FIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSA 254
F + ++ P +V W ++I + G S + ++ VG +P+ LL
Sbjct: 254 F-NDMLSPGNVQPDETTWVTVISSCSSLGDPCLSESIVRKLDDTVGFRPNYFVKTALLDM 312
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
A G ++ A F+ LG S + M+ AR G + A ++P + T S
Sbjct: 313 HAKCGNLEAAHKIFEQLGVYKYR-SSVPWNAMISAYARVGDLPSARHLFDKMPQRDTVS- 370
Query: 315 LGALLNGCMNHGK 327
+++ G +G+
Sbjct: 371 WNSMIAGYTQNGE 383
>IMGA|Medtr7g083950.1 Tetratricopeptide-like helical, identical
chr07_pseudomolecule_IMGAG_V3 18070671-18072734 H
EGN_Mt090430 20090702
Length = 687
Score = 276 bits (707), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 153/435 (35%), Positives = 250/435 (57%), Gaps = 7/435 (1%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ +T + A A L + G IHG+ + G + FV ++L+ +Y+ + A
Sbjct: 174 GVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREA 233
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRK 120
R VFD +P +++VSWN +L Y K + +F M D +W+ +I G +
Sbjct: 234 RMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMEN 293
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EA+ +F +M+ G KPNE+T+ S+L AC+ L G+ +H YV + L
Sbjct: 294 GRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTST 353
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+ MYAKCG + + +VF +M+ DV WN+MI A HG KE+L LF +M +
Sbjct: 354 TALLYMYAKCGDLNLSRNVF--DMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSR 411
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT-PKSEHYACMVDVMARAGQVAEA 299
V+P+ +T+ +LS C+H LV+E F+ +G++ + P + HY+C+VD+ +RAG++ EA
Sbjct: 412 VQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANHYSCVVDIYSRAGRLNEA 471
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+F+ +P++PTAS GALL C + ++LA+ +KL E+EP+ G YV L N+
Sbjct: 472 YKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAKKLFEIEPNNPGNYVSLFNILVTA 531
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+ W +A +R M+ G+ K+PG S++++ +H FV DKS+ S++IY L +V +M
Sbjct: 532 KMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFVVGDKSNIESDKIYNFLDELVEKM 591
Query: 420 KHIVDYENQEYYFYD 434
K + +Y D
Sbjct: 592 KMAGYKPDTDYVLQD 606
Score = 134 bits (337), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 144/305 (47%), Gaps = 42/305 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
G+ PD F LA A AC + + +H T+ G SD FV N+LIH Y + +
Sbjct: 73 GIKPDMPVF--LAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVE 130
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
AR+VFD + V+++VSW S+ Y KC G+ RKG
Sbjct: 131 GARRVFDDLVVRDVVSWTSLSSCYVKC--------------------------GFPRKG- 163
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+ VF EM SG KPN +T+ S+L ACA L L G+ +H + + + + + L + ++
Sbjct: 164 ----MDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSA 219
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
LV +YAKC +++EA VF LM DV WN ++ + + ++ LF +M GV+
Sbjct: 220 LVSLYAKCLSVREARMVF--DLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 277
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK-----SEHYACMVDVMARAGQVA 297
DE T+ ++ C G +EA F + K G P S AC R G+
Sbjct: 278 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEI 337
Query: 298 EAYQF 302
Y F
Sbjct: 338 HCYVF 342
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 2/229 (0%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
GD + ARQ+FD +P+ D + S LI G +EA+ ++ ++ G KP+ ++
Sbjct: 26 GDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAA 85
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA G + + +H + + + +L+ Y KC ++ A VF +++ D
Sbjct: 86 KACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLVVR--D 143
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V W S+ + G ++ +D+F EM GVKP+ +T ++L ACA +K
Sbjct: 144 VVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHG 203
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
++GM + +V + A+ V EA +P + S G L
Sbjct: 204 FAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVL 252
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/279 (21%), Positives = 121/279 (43%), Gaps = 36/279 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M ++G P+ +T + A + +G IH Y+ + D + +L++MY+ D
Sbjct: 306 MQKMGFKPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGD 365
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +R VFD + K++V+WN+M+ A
Sbjct: 366 LNLSRNVFDMMRRKDVVAWNTMIIANA-------------------------------MH 394
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
G+ EAL +F++M +S +PN VT VL C+H +++G ++ + D+ +
Sbjct: 395 GNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANH 454
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ +VD+Y++ G + EA + M+P+ W +++ AC L S +
Sbjct: 455 YSCVVDIYSRAGRLNEAYKFIQGMPMEPT-ASAWGALLA--ACRVYKNVELAKISAKKLF 511
Query: 240 GVKPDEI-TYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
++P+ Y++L + + EA + + G+T
Sbjct: 512 EIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGIT 550
>IMGA|Medtr4g154400.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 37905683-37903326 H
EGN_Mt090430 20090702
Length = 785
Score = 276 bits (705), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 152/433 (35%), Positives = 230/433 (53%), Gaps = 34/433 (7%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P T + +A A L + G +H ++ K+G + D V NSLI MY
Sbjct: 307 GLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMY--------- 357
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AKCG + A D M +D +S+S +I G V+ G +
Sbjct: 358 ----------------------AKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAE 395
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL +F +M+ SG P TM+++L AC+HL AL G H Y + + +++
Sbjct: 396 KALLIFRQMQSSGIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAII 455
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMY+KCG I + +F M+ D+ WN+MI G+ HGL E+L LF E+ +G+KPD
Sbjct: 456 DMYSKCGKITISREIFDR--MQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPD 513
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++T + +LSAC+H GLV E Y+F + +N + P+ HY CMVD++ARAG + EAY F+
Sbjct: 514 DVTLIAVLSACSHSGLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFI 573
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
++P P + GALL C H +++ E V +K+ L P G +V +SN+Y+ RWD
Sbjct: 574 QRMPFVPNVRIWGALLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWD 633
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIV 423
A +R G KKSPG S+VE+ G +H F+ +SHP S I L ++ QMK +
Sbjct: 634 DAAYIRSIQRHHGYKKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLG 693
Query: 424 DYENQEYYFYDNE 436
+ + +D E
Sbjct: 694 YRADSSFVLHDVE 706
Score = 144 bits (362), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/341 (29%), Positives = 170/341 (49%), Gaps = 37/341 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML++GV P + TFPFL KA + L +LG IH + G D +VS +L+HMY
Sbjct: 98 MLQLGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMY----- 152
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD--VLSWSCLIDGYV 118
AKCG + A+ +F+ + QD +++W+ +I +
Sbjct: 153 --------------------------AKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFS 186
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ + + +M+ +G PN T+VS+L AL +G+ +H Y I N +V
Sbjct: 187 FHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFDNVV 246
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH- 237
L+T+L+DMYAKC + A +F + + K +DV W++MIGG+ H + ++L L+ +M
Sbjct: 247 LQTALLDMYAKCHLLFYARKIFNT-VNKKNDV-CWSAMIGGYVLHDSISDALALYDDMLC 304
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
I G+ P T +L ACA +K + K+GM + ++ + A+ G +
Sbjct: 305 IYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKCGIMD 364
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
A FL ++ + T S A+++GC+ +G + A + R++
Sbjct: 365 NAVGFLDEMIAKDTVS-YSAIISGCVQNGYAEKALLIFRQM 404
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 134/302 (44%), Gaps = 50/302 (16%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
+I +AR VFD +P+ V+ W+ +I Y G + +++ ++ M G P T +L
Sbjct: 55 NEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLL 114
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
AC+ L AL GR++H + L + L + T+L+ MYAKCG + +A +F S + D
Sbjct: 115 KACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRD 174
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA-----HGGLVKEA 264
+ WN+MI F+ H L +++ ++M GV P+ T +++L H G A
Sbjct: 175 IVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHA 234
Query: 265 WY----FFDCLGK---------------------NGMTPKSE-HYACMVDVMARAGQVAE 298
+Y FFD + N + K++ ++ M+ +++
Sbjct: 235 YYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISD 294
Query: 299 AYQF----LCQIPIQPTASMLGALLNGC-----MNHGK----------LDLAETVGRKLI 339
A LC + PT + L +L C + GK +DL TVG LI
Sbjct: 295 ALALYDDMLCIYGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLI 354
Query: 340 EL 341
+
Sbjct: 355 SM 356
>IMGA|Medtr8g144980.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 35151695-35154046 H
EGN_Mt090430 20090702
Length = 783
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 132/338 (39%), Positives = 210/338 (62%), Gaps = 3/338 (0%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y K +I +AR +FD PE+ V++W+ +I GY + G + A+++F+EM + PN VT+
Sbjct: 355 YNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTI 414
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
++L ACA LG+L G+ +HH + L + + T+LVDMYAKCG I EA +F S M
Sbjct: 415 TTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDS--M 472
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ WN+MI G+ HG E+L L++EM +G P +T+L++L AC+H GLV E
Sbjct: 473 SEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGE 532
Query: 266 YFF-DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
F + + K + P EHYACMVD++ R+GQ+ +A +F+ ++P++P ++ G LL CM
Sbjct: 533 EIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMI 592
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
H D+A +L EL+P G YV LSN+Y++ R + KA S+R+ +++ + KSPG +
Sbjct: 593 HKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNFPKAASIRQVVKKRKLAKSPGCT 652
Query: 385 FVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
+E++G H FV+ D+SH + IY L + +M+ +
Sbjct: 653 LIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREM 690
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 150/335 (44%), Gaps = 37/335 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ T+ F +AC + L L +H + GY S+ FV ++L+ +Y F + ARKV
Sbjct: 109 PDNFTYAF--AVAACSNDKHLML-LHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKV 165
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FDG+P ++ V WN+M I+G V+ +D+++
Sbjct: 166 FDGMPERDTVLWNTM-------------------------------INGLVKNCCFDDSI 194
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F EM G + + T+ +VL A A L L G + + + T L+ +Y
Sbjct: 195 QLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLY 254
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+KCG + A +FR + +P D+ +N+MI GF +G + S+ LF E+ G + T
Sbjct: 255 SKCGDVNTARLLFRR-INRP-DLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSST 312
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ L+ + G + A K+G+ + + ++ A + P
Sbjct: 313 IVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESP 372
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
+ T A+++G +G + A ++ +++++ E
Sbjct: 373 -EKTVVAWNAMISGYTQNGSTETAISLFKEMMKTE 406
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 119/256 (46%), Gaps = 39/256 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ P+ +T + A A L G +H I E + +VS +L+ MY
Sbjct: 402 MMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVSTALVDMY----- 456
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG+IS A Q+FD M E++ ++W+ +I GY
Sbjct: 457 --------------------------AKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLH 490
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL ++ EM G P+ VT +SVL AC+H G + +G + H +++ L+
Sbjct: 491 GYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEH 550
Query: 181 TS-LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL--FSEMH 237
+ +VD+ + G +++AL + ++P +W +++G AC ++ + D+ +
Sbjct: 551 YACMVDILGRSGQLEKALEFIKKMPVEPGPA-VWGTLLG--AC--MIHKDTDIARLASER 605
Query: 238 IVGVKPDEITYLNLLS 253
+ + P + Y LLS
Sbjct: 606 LFELDPGSVGYYVLLS 621
>IMGA|Medtr1g046640.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 10951878-10954531 H
EGN_Mt090430 20090702
Length = 875
Score = 274 bits (701), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 141/413 (34%), Positives = 236/413 (57%), Gaps = 3/413 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V D P + + G +HGY K+G S V N++I MY+ D
Sbjct: 370 MRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGD 429
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A VF +P++N +SW +M+ +++ GDI AR FD+MPE+++++W+ ++ YV+
Sbjct: 430 TDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQN 489
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +E L ++ MR +G +P+ +T + + ACA L + G + + L L + +
Sbjct: 490 GFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVA 549
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S+V MY++CG I+EA + F S + D+ WN+M+ FA +GL + +D F +M
Sbjct: 550 NSIVTMYSRCGLIKEAKNTFDS--IDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTE 607
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
KP+ I+Y+++LS C+H GLV E ++FD + + G++P +EH++CMVD++ RAG + +A
Sbjct: 608 CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQA 667
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ +P +P A++ ALL C H L LAET +KL+EL+ YV LSN+Y+
Sbjct: 668 KDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSES 727
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
D MR+ M+ G++ S G S++E+ +H F + SHP +++Y+ L
Sbjct: 728 GELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKL 780
Score = 147 bits (372), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 149/305 (48%), Gaps = 2/305 (0%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +F + KA L L + +H ++K G+ + + NS++ MY D+ A VF
Sbjct: 145 DPFSFTSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVF 204
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
I +L WNSM+ GY++ A Q+F+ MPE+D +SW+ LI + + G + LA
Sbjct: 205 FDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLISIFSQHGFGVQCLA 264
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F EM G PN +T SVL ACA L G +H ++ E L LV L+DMYA
Sbjct: 265 MFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYA 324
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG + A VF+S ++ D WNS+I G GL +++L LF++M V DE
Sbjct: 325 KCGCLDLAKRVFKS--LREHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFIL 382
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
+L C+ K+GM + ++ + A+ G +A +P+
Sbjct: 383 PTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKCGDTDKADLVFRLMPL 442
Query: 309 QPTAS 313
+ T S
Sbjct: 443 RNTIS 447
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 132/328 (40%), Gaps = 60/328 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G P+ +T+ + A A + G +H I + + D N LI MY+
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A++VF + + +SWNS+ I G V
Sbjct: 329 LDLAKRVFKSLREHDHISWNSL-------------------------------ITGVVHF 357
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++AL +F +MR S +E + ++L C+ G ++H Y I + + + +
Sbjct: 358 GLGEDALILFNQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVG 417
Query: 181 TSLVDMYAKCGAIQEALHVF-------------------RSG----------LMKPSDVF 211
+++ MYAKCG +A VF RSG +M ++
Sbjct: 418 NAIITMYAKCGDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIV 477
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
WNSM+ + +G +E L L+ M GV+PD IT+ + ACA +VK
Sbjct: 478 TWNSMLSTYVQNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHA 537
Query: 272 GKNGMTPKSEHYACMVDVMARAGQVAEA 299
K G++ +V + +R G + EA
Sbjct: 538 TKFGLSLNVSVANSIVTMYSRCGLIKEA 565
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 148/319 (46%), Gaps = 17/319 (5%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H + +G +S F+ N+L+HMYS+ +A +VF +N+ +WN+M+
Sbjct: 30 LHAQLILSGLDSSLFLLNNLLHMYSNCGLTHDAFQVFQETHHRNIFTWNTMIRALVSSSR 89
Query: 92 ISMARQVFDLMP--EQDVLSWSCLIDGYVRKGDYDEALAVFEEM----RVSGPKPNEVTM 145
+S A ++FD MP +D +SW+ +I GY + G + + F M G + +
Sbjct: 90 MSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSLMIRDTNDGGKNYDPFSF 149
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
SV+ AC LG +H V + ++ S+V MY KCG + A VF +
Sbjct: 150 TSVMKACGSLGDSRLAIQLHALVSKLGFGMETCIQNSVVGMYVKCGDVDLAETVFFD-IE 208
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+PS +F WNSMI G++ ++L +F+ M + DE+++ L+S + G +
Sbjct: 209 RPS-LFCWNSMIYGYSQMYGPYKALQIFNRM----PERDEVSWNTLISIFSQHGFGVQCL 263
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
F + G +P Y ++ A + +I ++ S+ NG ++
Sbjct: 264 AMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARI-LRMEHSLDLVFGNGLIDM 322
Query: 326 ----GKLDLAETVGRKLIE 340
G LDLA+ V + L E
Sbjct: 323 YAKCGCLDLAKRVFKSLRE 341
>IMGA|Medtr7g037660.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 9024221-9021363 E
EGN_Mt090430 20090702
Length = 952
Score = 273 bits (699), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 153/439 (34%), Positives = 246/439 (56%), Gaps = 7/439 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD +T + A + L + G IHG+ + G D FV N+L+ +Y+
Sbjct: 435 MVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVC 494
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDG 116
+ A+ VFD IP + + SWN +L Y + +F M +V ++WS +I G
Sbjct: 495 VREAQVVFDLIPHREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGG 554
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
V+ +EA+ +F +M+ G KP+E T+ S+L AC+ L G+ +H YV +
Sbjct: 555 CVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWD 614
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L +LVDMYAKCG + + +VF +M DVF WN+MI HG KE+L LF +M
Sbjct: 615 LARTNALVDMYAKCGGLSLSRNVF--DMMPIKDVFSWNTMIFANGMHGNGKEALSLFEKM 672
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT-PKSEHYACMVDVMARAGQ 295
+ VKPD T+ +LSAC+H LV+E F+ + ++ + P++EHY C+VD+ +RAG
Sbjct: 673 LLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMSRDHLVEPEAEHYTCVVDIYSRAGC 732
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ EAY F+ ++P++PTA A L GC + ++LA+ +KL E++P+ YV L N+
Sbjct: 733 LEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELAKISAKKLFEIDPNGSANYVTLFNI 792
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
+ W +A +R+ M+ G+ K+PG S+ + +H FVA DKS+ S++IY L +
Sbjct: 793 LVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNRVHTFVAGDKSNMESDKIYNFLDEL 852
Query: 416 VSQMKHIVDYENQEYYFYD 434
+++K + +Y +D
Sbjct: 853 FAKIKAAGYKPDTDYVLHD 871
Score = 139 bits (350), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 97/318 (30%), Positives = 155/318 (48%), Gaps = 33/318 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD +T + A + L + G AIHG+ K G + FVSN+L+++Y S
Sbjct: 233 MVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYES--- 289
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
C + A+ VFDLMP ++V++W+ L YV
Sbjct: 290 ----------------------------CLCVREAQAVFDLMPHRNVITWNSLASCYVNC 321
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + L VF EM ++G KP+ + M S+L AC+ L L G+ +H + + + + + +
Sbjct: 322 GFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVC 381
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LV++YA C ++EA VF LM +V WNS+ + G ++ L++F EM + G
Sbjct: 382 TALVNLYANCLCVREAQTVF--DLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNG 439
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
VKPD +T L++L AC+ +K ++GM ++ + A+ V EA
Sbjct: 440 VKPDLVTMLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQ 499
Query: 301 QFLCQIPIQPTASMLGAL 318
IP + AS G L
Sbjct: 500 VVFDLIPHREVASWNGIL 517
Score = 123 bits (308), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/279 (29%), Positives = 131/279 (46%), Gaps = 33/279 (11%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IHG++ + G D FVS++ ++ Y AK
Sbjct: 160 GKEIHGFVVRHGMVEDVFVSSAFVNFY-------------------------------AK 188
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
C + A+ VFDLMP +DV++W+ L YV G + L VF EM + G KP+ VT+ +
Sbjct: 189 CLCVREAQTVFDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCI 248
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC+ L L G+ +H + + + + + + +LV++Y C ++EA VF LM
Sbjct: 249 LSACSDLQDLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVF--DLMPHR 306
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+V WNS+ + G ++ L++F EM + GVKPD + ++L AC+ +K
Sbjct: 307 NVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIH 366
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
K+GM +V++ A V EA +P
Sbjct: 367 GFAVKHGMVEDVFVCTALVNLYANCLCVREAQTVFDLMP 405
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 120/252 (47%), Gaps = 33/252 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD F +AKA A H T+ G SD + N+ IH
Sbjct: 35 GIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIH----------- 83
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
Y KC + AR+VFD + +DV++W+ L YV G
Sbjct: 84 --------------------AYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQ 123
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ L VF +M ++ K N +T+ S+L C+ L L G+ +H +V+ + + + + ++ V
Sbjct: 124 QGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFV 183
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+ YAKC ++EA VF LM DV WNS+ + G ++ L++F EM + GVKPD
Sbjct: 184 NFYAKCLCVREAQTVF--DLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPD 241
Query: 245 EITYLNLLSACA 256
+T +LSAC+
Sbjct: 242 PVTVSCILSACS 253
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 63/133 (47%), Gaps = 2/133 (1%)
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+EA+ ++ R G KP++ ++V ACA K + H + + + +
Sbjct: 22 NEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAF 81
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ Y KC ++ A VF + + DV WNS+ + G ++ L++F +M + VK
Sbjct: 82 IHAYGKCKCVEGARRVFDDLVAR--DVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKA 139
Query: 244 DEITYLNLLSACA 256
+ +T ++L C+
Sbjct: 140 NPLTVSSILPGCS 152
>IMGA|Medtr5g006710.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 814872-817676 E
EGN_Mt090430 20090702
Length = 828
Score = 272 bits (696), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 148/431 (34%), Positives = 244/431 (56%), Gaps = 6/431 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ G PD +T A A L +G + H Y+ + G E +SN++I MY
Sbjct: 315 MLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNISNAIIDMYMKCGK 374
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A KVFD + K +V+WNS++ G + G++ +A ++F MPE +++SW+ +I V+
Sbjct: 375 REAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLVSWNTMIGAMVQA 434
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++EA+ + EM+ G K + VTMV + AC +LGALD + ++ Y+ N++ + + L
Sbjct: 435 SMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYIEKNDIHIDMQLG 494
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LVDM+++CG A+ VF + M+ DV W + I A G K +++LF EM
Sbjct: 495 TALVDMFSRCGDPLNAMRVFEN--MEKRDVSAWTAAIRVKAVEGNAKGAIELFDEMLKQD 552
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEA 299
VK D+ ++ LL+A +HGG V + F + K +G++P+ HY CMVD++ RAG + EA
Sbjct: 553 VKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDLLGRAGLLEEA 612
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +PI+P + G+ L C H ++ A K+ +L P + G +V LSN+YA
Sbjct: 613 FDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSNIYASA 672
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI---V 416
+W+ +R M+ G +K G S +E+HG + F + D+SH + QI +ML I +
Sbjct: 673 GKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIGLMLQEINCRI 732
Query: 417 SQMKHIVDYEN 427
SQ+ ++ D N
Sbjct: 733 SQVGYVPDTTN 743
Score = 165 bits (417), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 201/474 (42%), Gaps = 99/474 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++ +G+ PD+ TFPFL A + ++ G+ +HG + K G D FV+NSLIH Y++
Sbjct: 113 IIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKMGLVKDLFVANSLIHFYAACGK 172
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGY---------------------------------- 86
+ RKVFD + +N+VSW S+++GY
Sbjct: 173 VDLGRKVFDEMLERNVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISA 232
Query: 87 -AKCGDISMARQVFDLMPE-----------------------------------QDVLSW 110
AK D+ + ++V +LM E ++++ +
Sbjct: 233 CAKLKDLELGKKVCNLMTELGVKSNTLVVNALLDMYMKCGDMYAVREIFDEFSDKNLVMY 292
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ ++ YV+ G E L V +EM G +P++VTM+S + ACA LG L G+ H YV
Sbjct: 293 NTIMSNYVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFR 352
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRS---------------------------- 202
N L + +++DMY KCG + A VF S
Sbjct: 353 NGLERLDNISNAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRI 412
Query: 203 -GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
G M S++ WN+MIG + +E++DL EM G+K D +T + + SAC + G +
Sbjct: 413 FGEMPESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGAL 472
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
A + + + KN + + +VD+ +R G A + + + ++ A+
Sbjct: 473 DLAKWIYTYIEKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVK 532
Query: 322 CMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
+ E L + D +V L ++ D+ R + AME++
Sbjct: 533 AVEGNAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKI 586
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 75/145 (51%), Gaps = 3/145 (2%)
Query: 113 LIDGYVRKGDYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LI GY G EA+ ++ M V G P+ T +L AC+ + A +G +H V+
Sbjct: 92 LIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLLSACSKIMAFSEGVQVHGVVVKM 151
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
L L + SL+ YA CG + VF M +V W S+I G++ + KE++
Sbjct: 152 GLVKDLFVANSLIHFYAACGKVDLGRKVFDE--MLERNVVSWTSLINGYSVVNMAKEAVC 209
Query: 232 LFSEMHIVGVKPDEITYLNLLSACA 256
LF EM VGV+P+ +T + +SACA
Sbjct: 210 LFFEMVEVGVEPNPVTMVCAISACA 234
>IMGA|Medtr2g105210.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 25018438-25022202 E
EGN_Mt090430 20090702
Length = 829
Score = 271 bits (694), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 150/402 (37%), Positives = 232/402 (57%), Gaps = 23/402 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRE---LGLAIHGYITKAGYE-SDRFVSNSLIHMYS 56
ML V P+H+T L A A + G A+H + K G+ +D V +LI MY+
Sbjct: 441 MLEAEVEPNHITLITLLSACAHSPSKTSITFGAALHTHAFKHGFAMNDVMVGTALIDMYA 500
Query: 57 SFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ AR VFD + V+NLVSWN+M+DGY K GD+ A ++FD +P ++V+SW+ +I G
Sbjct: 501 KCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNGDVDDALKLFDKLPVKNVVSWTVVIGG 560
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+V+K Y+EAL F EM+++G P+ VT+++++ ACA+LGAL G +H V+ E
Sbjct: 561 FVKKECYEEALECFREMQLAGVVPDFVTVIAIISACANLGALGLGLWVHRLVMKKEFRDN 620
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ + SL+DMYA+CG I+ A VF M ++ WNS+I GFA +GL ++L F M
Sbjct: 621 VKVLNSLIDMYARCGCIELARQVFDG--MSQRNLVSWNSIIVGFAVNGLADKALSFFRSM 678
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFF-DCLGKNGMTPKSEHYACMVDVMARAGQ 295
G H GL+ E F D + +P+ EHY C+VD+ +RAG+
Sbjct: 679 KKEG----------------HAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGR 722
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ EA+ + ++P+ P +LG+LL C G ++LAE V + +EL P D YV SN+
Sbjct: 723 LKEAWDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNI 782
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVA 397
YA +WD A +R M+ G++K+ +S +E+ +H+FV+
Sbjct: 783 YAAVGKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVS 824
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 106/228 (46%), Gaps = 33/228 (14%)
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH---LGALDKGRM 163
+SW+ I + + ++ +A + F +M + +PN +T++++L ACAH ++ G
Sbjct: 415 TVSWTSSISHHCKNNNFLKAASEFIQMLEAEVEPNHITLITLLSACAHSPSKTSITFGAA 474
Query: 164 MHHYVIDNELPLT-LVLRTSLVDMYAKCGAIQEALHVFRS--------------GLMKPS 208
+H + + + +++ T+L+DMYAKCG + A VF G MK
Sbjct: 475 LHTHAFKHGFAMNDVMVGTALIDMYAKCGKLDYARLVFDQMGVRNLVSWNTMIDGYMKNG 534
Query: 209 D---------------VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
D V W +IGGF +E+L+ F EM + GV PD +T + ++S
Sbjct: 535 DVDDALKLFDKLPVKNVVSWTVVIGGFVKKECYEEALECFREMQLAGVVPDFVTVIAIIS 594
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
ACA+ G + + + K + ++D+ AR G + A Q
Sbjct: 595 ACANLGALGLGLWVHRLVMKKEFRDNVKVLNSLIDMYARCGCIELARQ 642
>IMGA|Medtr1g017120.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr01_pseudomolecule_IMGAG_V3 3544675-3542306
E EGN_Mt090430 20090702
Length = 697
Score = 271 bits (693), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 136/343 (39%), Positives = 210/343 (61%), Gaps = 4/343 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+S++D Y KCG + A +F LMP+ +SW+ +I GYV +G +AL +F EM S +
Sbjct: 347 SSLMDLYFKCGKVESAETIFKLMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSFVE 406
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ +T SVL AC+ L AL+KGR +H+ +++ L V+ +L+DMYAKCGA++EA V
Sbjct: 407 PDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAFGV 466
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F+ + D+ W SMI + HG V E+L+LF+EM VKPD +T+L +LSAC+H G
Sbjct: 467 FKC--LPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAG 524
Query: 260 LVKEAWYFFD-CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP-IQPTASMLGA 317
LV + Y F+ + G+ P+ EHY+C++ ++ RAG++ EAY+ L P I +L
Sbjct: 525 LVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSNPEISDDFQLLST 584
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
L + C H LDL + LI+ +P Y+ LSN+YA F +WD+ R +R M+ +G+
Sbjct: 585 LFSACRLHKNLDLGVEIAENLIDKDPDDSSTYIILSNMYASFGKWDEVRMVRSKMKDLGL 644
Query: 378 KKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
KK+PG S++E++ + F D SH E I +L ++ S M+
Sbjct: 645 KKNPGCSWIEINEKIVPFFVEDNSHYHLEGIGNILSYLTSHME 687
Score = 149 bits (375), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 94/328 (28%), Positives = 160/328 (48%), Gaps = 34/328 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G PD +T + A LL + G IH + +G+ D FVS +L+ MY
Sbjct: 198 MRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMY----- 252
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + MA +VF+ MP + V++W+ +I+GY K
Sbjct: 253 --------------------------GKCGQLEMAIEVFEQMPNKTVVAWNSMINGYGFK 286
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD + +F+ M G KP T+ S L AC+ L +G+ +H Y+I N + + L
Sbjct: 287 GDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLN 346
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SL+D+Y KCG ++ A +F+ LM + WN MI G+ G + ++L LF EM
Sbjct: 347 SSLMDLYFKCGKVESAETIFK--LMPKTTTVSWNVMISGYVTEGKLFDALRLFGEMSKSF 404
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V+PD IT+ ++L+AC+ +++ + + + + ++D+ A+ G V EA+
Sbjct: 405 VEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLDMYAKCGAVEEAF 464
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKL 328
+P + S +++ +HG++
Sbjct: 465 GVFKCLPERDLVSWT-SMITAYGSHGRV 491
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/321 (29%), Positives = 151/321 (47%), Gaps = 34/321 (10%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T+P + KA L + LG IH + K G D V +SL+ MY
Sbjct: 104 PDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMY------------ 151
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
AKC + A ++FD MP++DV W+ +I Y + G ++EAL
Sbjct: 152 -------------------AKCNEFECAVKLFDEMPDKDVACWNTVISCYYQSGKFEEAL 192
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
F MR G +P+ VT+ + + +CA L LD+GR +H ++++ + + +LVDMY
Sbjct: 193 RYFGMMRRFGFEPDSVTITTAISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMY 252
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KCG ++ A+ VF M V WNSMI G+ G + LF M+ GVKP T
Sbjct: 253 GKCGQLEMAIEVFEQ--MPNKTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTT 310
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ L AC+ + E + + +N + P + ++D+ + G+V A +P
Sbjct: 311 LTSTLMACSQSAQLLEGKFVHGYIIRNRIQPDIFLNSSLMDLYFKCGKVESAETIFKLMP 370
Query: 308 IQPTASMLGALLNGCMNHGKL 328
T S +++G + GKL
Sbjct: 371 KTTTVSW-NVMISGYVTEGKL 390
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 121/250 (48%), Gaps = 11/250 (4%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW-SCLIDGYVRKGDYDEALAVFEE 132
KNL+S Y C A+ VFD++ +S + L+ GY R YDEAL +F++
Sbjct: 42 KNLISL------YVSCNLFDYAKNVFDVIENPFEISLCNGLMAGYTRNCMYDEALGLFDK 95
Query: 133 -MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
M KP+ T SVL AC L + G+M+H ++ L + +V+ +SLV MYAKC
Sbjct: 96 LMCYPCLKPDSYTYPSVLKACGGLRRVVLGQMIHTCLVKEGLMVDIVVGSSLVGMYAKCN 155
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A+ +F M DV WN++I + G +E+L F M G +PD +T
Sbjct: 156 EFECAVKLFDE--MPDKDVACWNTVISCYYQSGKFEEALRYFGMMRRFGFEPDSVTITTA 213
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
+S+CA + L +G S A +VD+ + GQ+ A + Q+P T
Sbjct: 214 ISSCARLLDLDRGREIHKELVNSGFRMDSFVSAALVDMYGKCGQLEMAIEVFEQMP-NKT 272
Query: 312 ASMLGALLNG 321
+++NG
Sbjct: 273 VVAWNSMING 282
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 116/232 (50%), Gaps = 11/232 (4%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLD 84
L + G ++K+ E D S++ S + R++ + I +NL V ++LD
Sbjct: 393 ALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNLIVERNLGNNEVVMGALLD 452
Query: 85 GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
YAKCG + A VF +PE+D++SW+ +I Y G EAL +F EM S KP+ VT
Sbjct: 453 MYAKCGAVEEAFGVFKCLPERDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVT 512
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS-LVDMYAKCGAIQEALHVFRSG 203
+++L AC+H G +D G + +I+ + + S L+ + + G + EA + +S
Sbjct: 513 FLAILSACSHAGLVDDGLYHFNQMINVYGIIPRIEHYSCLITLLGRAGRLHEAYEILQSN 572
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLS 253
D + +++ H ++LDL E+ +++ PD+ + +LS
Sbjct: 573 PEISDDFQLLSTLFSACRLH----KNLDLGVEIAENLIDKDPDDSSTYIILS 620
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 79/168 (47%), Gaps = 14/168 (8%)
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
++ +L A + +L +G+++H V+ L + + +L+ +Y C A +VF +
Sbjct: 6 LIPLLRASVNSKSLKQGKVLHQKVVTLGLQNDVYVCKNLISLYVSCNLFDYAKNVFDV-I 64
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSE-MHIVGVKPDEITYLNLLSACAHGGLVKE 263
P ++ + N ++ G+ + + E+L LF + M +KPD TY ++L AC V
Sbjct: 65 ENPFEISLCNGLMAGYTRNCMYDEALGLFDKLMCYPCLKPDSYTYPSVLKACGGLRRVVL 124
Query: 264 AWYFFDCLGKNGMTPKSEHYACMVDVM---ARAGQVAEAYQFLCQIPI 308
CL K G+ MVD++ + G A+ +F C + +
Sbjct: 125 GQMIHTCLVKEGL---------MVDIVVGSSLVGMYAKCNEFECAVKL 163
>IMGA|Medtr7g083620.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 17895003-17897468 E
EGN_Mt090430 20090702
Length = 790
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 150/433 (34%), Positives = 239/433 (55%), Gaps = 38/433 (8%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TFP + + C++ ++HG I K G+E+ + VSN+L+ MY
Sbjct: 318 DDYTFP--SVLNCCVVGSINPKSVHGLIIKTGFENYKLVSNALVDMY------------- 362
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
AK GD+ A VF+ M E+DV+SW+ L+ GY + ++E+L
Sbjct: 363 ------------------AKTGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLK 404
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F +MRV+G P++ + S+L ACA L L+ G+ +H I + L + + SLV MYA
Sbjct: 405 IFCDMRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYA 464
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG + +A +F S M+ DV W ++I G+A +G + SL + M G +PD IT+
Sbjct: 465 KCGCLDDADAIFVS--MQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITF 522
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ LL AC+H GLV E +F + K G+ P EHYACM+D+ R+G++ EA Q L Q+
Sbjct: 523 IGLLFACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGRSGKLDEAKQLLDQMD 582
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
++P A++ +LL+ C H L+LAE L ELEP YV LSN+Y+ R+W+
Sbjct: 583 VKPDATVWKSLLSACRVHENLELAERAATNLFELEPMNAMPYVMLSNMYSASRKWNDVAK 642
Query: 368 MREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYEN 427
+R+ M+ G+ K PG S++E++ ++ F++ D+ HP +IY + I+ ++K +
Sbjct: 643 IRKLMKSKGIVKEPGCSWLEINSRVNTFISDDRGHPREAEIYTKIDEIILRIKEAGYVPD 702
Query: 428 QEYYFY--DNEGK 438
+ + D EGK
Sbjct: 703 MSFSLHDMDKEGK 715
Score = 137 bits (346), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 93/301 (30%), Positives = 155/301 (51%), Gaps = 24/301 (7%)
Query: 37 TKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMAR 96
T A YES + +N L++ S + +ARK+FD +P K+ SWN+M+ Y G + AR
Sbjct: 11 TAASYES-IYQTNQLLNQLSKSGQVNDARKLFDKMPQKDEYSWNTMISSYVNVGRLVEAR 69
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
++FD + ++WS +I GY + G EA +F MR+ G K ++ T+ SVL C+ LG
Sbjct: 70 ELFDGCSCKSSITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLG 129
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
+ G M+H +V+ N + + T LVDMYAKC + EA +F+ + +W +M
Sbjct: 130 LIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAM 189
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGLVKEAW 265
+ G+A +G ++++ F MH GV+ ++ T+ +L+AC+ HG +VK +
Sbjct: 190 VTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGF 249
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
G N + +VD+ A+ G + A L + S +L+ G + H
Sbjct: 250 ------GSNVYVQSA-----LVDMYAKCGDLKNAKNMLETMEDDDVVS-WNSLMVGFVRH 297
Query: 326 G 326
G
Sbjct: 298 G 298
Score = 137 bits (346), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 158/321 (49%), Gaps = 39/321 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV + TFP + A + +L R G +HG+I K+G+ S+ +V ++L+ MY
Sbjct: 213 GVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMY--------- 263
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
AKCGD+ A+ + + M + DV+SW+ L+ G+VR G +
Sbjct: 264 ----------------------AKCGDLKNAKNMLETMEDDDVVSWNSLMVGFVRHGLEE 301
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F+ M K ++ T SVL C +G+++ + +H +I ++ +LV
Sbjct: 302 EALRLFKNMHGRNMKIDDYTFPSVLNCCV-VGSINP-KSVHGLIIKTGFENYKLVSNALV 359
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAK G + A VF L K DV W S++ G+A + +ESL +F +M + GV PD
Sbjct: 360 DMYAKTGDMDCAYTVFEKMLEK--DVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPD 417
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+ ++LSACA L++ K+G+ Y +V + A+ G + +A
Sbjct: 418 QFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFV 477
Query: 305 QIPIQP----TASMLGALLNG 321
+ ++ TA ++G NG
Sbjct: 478 SMQVKDVITWTAIIVGYAQNG 498
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 137/276 (49%), Gaps = 37/276 (13%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV--KNLVSWNSMLD 84
+ G IHG++ K G+E + FV L+ MY+ + + A +F G+ KN V W +M+
Sbjct: 132 QTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDRKNHVLWTAMVT 191
Query: 85 GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
GYA+ G DGY +A+ F M G + N+ T
Sbjct: 192 GYAQNG------------------------DGY-------KAVEFFRYMHAQGVECNQYT 220
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
++L AC+ + A G +H +++ + + ++++LVDMYAKCG ++ A ++ +
Sbjct: 221 FPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQSALVDMYAKCGDLKNAKNMLET-- 278
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
M+ DV WNS++ GF HGL +E+L LF MH +K D+ T+ ++L+ C G + ++
Sbjct: 279 MEDDDVVSWNSLMVGFVRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSINPKS 338
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ + K G +VD+ A+ G + AY
Sbjct: 339 VHGL--IIKTGFENYKLVSNALVDMYAKTGDMDCAY 372
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 105/238 (44%), Gaps = 47/238 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV PD + A A L E G +H K+G + V NSL+ MY+
Sbjct: 409 MRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGC 468
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A +F + VK++++W +++ GYA+ G K
Sbjct: 469 LDDADAIFVSMQVKDVITWTAIIVGYAQNG-----------------------------K 499
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +L ++ M SG +P+ +T + +L AC+H G +D+GR ++ ++
Sbjct: 500 G--RNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQ-----QMNKVYGIK 552
Query: 181 ------TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
++D++ + G + EA + +KP D +W S++ AC V E+L+L
Sbjct: 553 PGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKP-DATVWKSLLS--ACR--VHENLEL 605
>IMGA|CU179634_15.1 pentatricopeptide, putative CU179634.6
64404-61990 H EGN_Mt090430 20090702
Length = 804
Score = 270 bits (689), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 144/437 (32%), Positives = 239/437 (54%), Gaps = 3/437 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G+ PD T + A A LG +H Y+ + + V N+LI +Y
Sbjct: 291 MYLAGMKPDEFTCTSILSACADAGLFLLGKQVHAYVKRTEEKIHVSVYNALITLYWKCGR 350
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARKVFD + K++VSWN++L Y G IS A+ FD MPE++ L+W+ +I G +
Sbjct: 351 VDDARKVFDNLVFKDIVSWNAVLSAYVSAGRISEAKLFFDEMPEKNSLAWTVMISGLAQN 410
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++ L +F +MRV G + + + +CA LGAL+ G +H +I +L
Sbjct: 411 GLGEDGLKLFNQMRVKGIELCDYAFAGAITSCAVLGALETGCQLHAQLIQRGYDSSLSAG 470
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LV Y + G I+ A +VF + M D+ WN+++ HG +++ LF +M
Sbjct: 471 NALVTFYGRSGVIEAARNVFLT--MPCVDLVSWNALVAALGQHGYGVQAVGLFEQMLDEN 528
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ PD I++L ++SAC+H GLV++ ++F+ + + P +HYA +VD+++RAG++ EA
Sbjct: 529 IMPDRISFLTVISACSHAGLVEKGRHYFNIMHSVYKIIPGEDHYARLVDLLSRAGRLLEA 588
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +P +P A + ALL GC H +DL +L EL P DG Y+ L+N +A
Sbjct: 589 KEVIQNMPYKPKAPIWEALLAGCRTHRNVDLGVEAAEQLFELTPQHDGTYILLANTFAAA 648
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
RWD A +R+ M GVKK PG S++++ +H F+ D +HP + +Y L + +M
Sbjct: 649 GRWDDAAKVRKLMRDQGVKKEPGCSWIKVENTVHVFLVGDTAHPEIQVVYNYLEELRLKM 708
Query: 420 KHIVDYENQEYYFYDNE 436
+ + + +Y +D E
Sbjct: 709 RKMGFVPDTQYVLHDME 725
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 166/331 (50%), Gaps = 38/331 (11%)
Query: 8 PDHLTFPFLAKASACLLKRELGL-AIHGYITKAGYESDRFVSNSLIHMY---------SS 57
PD T+ + A A + E+ +H + K+G + + V N+LI +Y SS
Sbjct: 156 PDEYTYTSVLAALALIADHEMHCRQMHCAVAKSGMANFKCVVNALICVYVRCASSPLASS 215
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
+ +A K+F +P ++ +SW +++ GY K D+ AR+VFD M E+ +++W+ +I GY
Sbjct: 216 LLLMDSASKLFYEMPERDDLSWTTIITGYVKNDDLDAARKVFDGMDEKLLVAWNAMISGY 275
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
V KG EAL + +M ++G KP+E T S+L ACA G G+ +H YV E + +
Sbjct: 276 VHKGFIFEALDMLRKMYLAGMKPDEFTCTSILSACADAGLFLLGKQVHAYVKRTEEKIHV 335
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ +L+ +Y KCG + +A VF + + K D+ WN+++ + G + E+ F EM
Sbjct: 336 SVYNALITLYWKCGRVDDARKVFDNLVFK--DIVSWNAVLSAYVSAGRISEAKLFFDEM- 392
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+ + + + ++S A GL ++ F+ + G+ + D A AG +
Sbjct: 393 ---PEKNSLAWTVMISGLAQNGLGEDGLKLFNQMRVKGIE--------LCD-YAFAGAIT 440
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ ++LGAL GC H +L
Sbjct: 441 -------------SCAVLGALETGCQLHAQL 458
Score = 107 bits (266), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 135/285 (47%), Gaps = 46/285 (16%)
Query: 17 AKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL 76
A +++ LL+ +IH + +G+ + NSLI++Y + A+ +FD IP ++
Sbjct: 36 ATSASALLR-----SIHANMITSGFRPRSHILNSLINIYCKNSGLVYAKHLFDRIPQPDV 90
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPE--QDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
V+ +M+ Y+ G+ +AR++FD P +D + ++ +I GY A+ +F +MR
Sbjct: 91 VARTTMIAAYSASGEPKLAREIFDKTPLSFRDTVCYNAMITGYSHNNHGHAAIKLFLDMR 150
Query: 135 VSGPKPNEVTMVSVLCACAHLGALD-KGRMMHHYVIDNELPLTLVLRTSLVDMYAKC--- 190
+P+E T SVL A A + + R MH V + + + +L+ +Y +C
Sbjct: 151 WKNFQPDEYTYTSVLAALALIADHEMHCRQMHCAVAKSGMANFKCVVNALICVYVRCASS 210
Query: 191 ------GAIQEALHVFR--------------SGLMKPSD---------------VFIWNS 215
+ A +F +G +K D + WN+
Sbjct: 211 PLASSLLLMDSASKLFYEMPERDDLSWTTIITGYVKNDDLDAARKVFDGMDEKLLVAWNA 270
Query: 216 MIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
MI G+ G + E+LD+ +M++ G+KPDE T ++LSACA GL
Sbjct: 271 MISGYVHKGFIFEALDMLRKMYLAGMKPDEFTCTSILSACADAGL 315
>IMGA|Medtr7g011110.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 2602916-2606076 E
EGN_Mt090430 20090702
Length = 631
Score = 269 bits (688), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/467 (34%), Positives = 232/467 (49%), Gaps = 69/467 (14%)
Query: 5 GVFPDHLTFPFLAKA---SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
GV D+ T+PFL K S+ L L +H ++ K G+ D FV NSLI Y D+
Sbjct: 118 GVLADNFTYPFLLKGCNGSSSWLS--LVKMVHAHVEKLGFYWDIFVPNSLIDCYCRCGDV 175
Query: 62 P-------------------------------NARKVFDGIPVKNLVSWNSMLDGYAKCG 90
A KVFD +P ++ VSWN+MLDG+ K G
Sbjct: 176 EMAMKVFSGMEERDVVSWNSMVGGLVKNGDLDGALKVFDEMPERDRVSWNTMLDGFTKAG 235
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD-------------------------- 124
++ A ++F+ M E+D++SWS ++ GY + GD D
Sbjct: 236 EMDKAFKLFERMAERDIVSWSTMVCGYSKNGDMDMARMLFDRCPVKNLVLWTTIISGYAE 295
Query: 125 -----EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
EA+ + +EM SG + ++ +S+L ACA G L G+ MH + + + +
Sbjct: 296 KGQVKEAMNLCDEMEKSGLRLDDGFFISILAACAESGMLGLGKKMHDSFLRSRFRCSTKV 355
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
S +DMYAKCG + +A VF +G+ D+ WNSMI GF HG ++S++LF+ M
Sbjct: 356 LNSFIDMYAKCGCVDDAFRVF-NGMKTEKDLVSWNSMIHGFGIHGHGEKSIELFNTMVRE 414
Query: 240 GVKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G KPD T++ LL AC H GLV E YF+ G+ P+ EHY CMVD++ R G + E
Sbjct: 415 GFKPDRYTFIGLLCACTHAGLVNEGRGYFYSMQRVYGIVPQIEHYGCMVDLLGRGGHLKE 474
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A+ + +P +P A +LG LL C H + LA +V + L +L P G + LSN+YA
Sbjct: 475 AFWLVRSMPFEPNAIILGTLLGACRMHNDVKLATSVSKYLFKLVPSDPGNFSLLSNIYAQ 534
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSS 405
W +R+ M G +K G S +E+ +H F D SHP S
Sbjct: 535 SGDWINVAKVRKQMNDEGGQKPSGVSSIEVEEEVHEFTVRDWSHPKS 581
>IMGA|Medtr2g041810.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 11597364-11600597 H
EGN_Mt090430 20090702
Length = 688
Score = 268 bits (686), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 142/398 (35%), Positives = 218/398 (54%), Gaps = 36/398 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD ++ + A L ELG + G++ + G + + ++ ++LI MYS
Sbjct: 214 GFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYS-------- 265
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCG++ +R++FD MP +D ++W+ I Y + G D
Sbjct: 266 -----------------------KCGELVSSRRIFDGMPSRDFITWNAAISAYAQNGMAD 302
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA+++F M+ +G PN+VT+ +VL ACA +GALD G+ M Y L + + T+L+
Sbjct: 303 EAISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALI 362
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG--VK 242
DMYAKCG+++ A VF M + WN+MI A HG KE+L LF M G +
Sbjct: 363 DMYAKCGSLESAQRVFND--MPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSAR 420
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQ 301
P++IT+++LLSAC H GLV E + FD + G+ PK EHY+CMVD+++RAG + EA+
Sbjct: 421 PNDITFVSLLSACVHAGLVDEGYRLFDMMSTLFGLVPKIEHYSCMVDLLSRAGHLYEAWD 480
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ ++P +P LGAL + C +D+ E V + L+EL+P G Y+ S +Y
Sbjct: 481 VIEKMPEKPDNVTLGALHSACQRKKNVDIGERVIQMLLELDPSNSGNYIISSKIYENLNM 540
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHD 399
WD A MR M GV K+PG S++E+ L F++ D
Sbjct: 541 WDDAARMRALMRENGVTKTPGCSWIEVGNQLREFLSGD 578
Score = 150 bits (378), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 97/327 (29%), Positives = 160/327 (48%), Gaps = 33/327 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + P++ TFPF+ A A L + + H + K G ++D NS++ MY +
Sbjct: 108 MKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTMYFRCGE 167
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
ARKVFD I K+LVSWNS+L GYAK G A +VF + E+
Sbjct: 168 NGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREE--------------- 212
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
SG +P+E+++VSVL AC LG L+ GR + +V++ + + +
Sbjct: 213 ---------------SGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIG 257
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+ MY+KCG + + +F M D WN+ I +A +G+ E++ LF M G
Sbjct: 258 SALISMYSKCGELVSSRRIFDG--MPSRDFITWNAAISAYAQNGMADEAISLFHSMKENG 315
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V P+++T +LSACA G + + G+ ++D+ A+ G + A
Sbjct: 316 VDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDMYAKCGSLESAQ 375
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGK 327
+ +P + AS A+++ +HGK
Sbjct: 376 RVFNDMPRKNDASW-NAMISALASHGK 401
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 109/259 (42%), Gaps = 41/259 (15%)
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
DY L ++ +M+ PN T V ACA+L + R+ H V L
Sbjct: 97 DYPLTLHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVN 156
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVG 240
S+V MY +CG A VF + D+ WNS++ G+A G +E++++F + G
Sbjct: 157 SMVTMYFRCGENGVARKVFDE--ITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESG 214
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+PDE++ +++L AC G ++ + + + GM S + ++ + ++ G++ +
Sbjct: 215 FEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGELVSSR 274
Query: 301 QFLCQIP----------------------------------IQPTASMLGALLNGCMNHG 326
+ +P + P L A+L+ C + G
Sbjct: 275 RIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSACASIG 334
Query: 327 KLDLAETVGRKLIELEPHQ 345
LDL G+++ E H+
Sbjct: 335 ALDL----GKQMDEYATHR 349
>IMGA|Medtr7g130260.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 30426808-30425395 E
EGN_Mt090430 20090702
Length = 467
Score = 268 bits (684), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 152/395 (38%), Positives = 221/395 (55%), Gaps = 35/395 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + P++ TFPFL K+ + ++ ++ K GY +D +V+NSL
Sbjct: 100 MHKNSILPNNFTFPFLFKSLSDSHDFVQSQCVYTHVIKLGYVNDIYVNNSL--------- 150
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD YA G + + RQ+FD MP++DV+SW+ +I GY
Sbjct: 151 ----------------------LDVYASYGCLELCRQLFDEMPQRDVVSWTVMIMGYRNG 188
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y++AL VFE+M+ G PN VTMV+ L ACA A++ G + V N L ++L
Sbjct: 189 GKYNDALLVFEQMQYGGVVPNRVTMVNALSACASSCAIEMGVWIDDMVRRNGWELDVILG 248
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMY KCG ++E L VF MK +VF N +I G A V+E+L F+ M + G
Sbjct: 249 TALIDMYVKCGRVEEGLKVFCD--MKEKNVFTLNVVIKGLALAKSVEEALLWFNRMELDG 306
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCL--GKNGMTPKSEHYACMVDVMARAGQVAE 298
V+ DE+T + +LSAC+H GLV++ + F L GK G P +HYACMVD++ARAGQ+ E
Sbjct: 307 VRADEVTLVTVLSACSHSGLVEKGRFIFSMLVDGKYGFLPNVKHYACMVDLLARAGQLQE 366
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A+ + +P +PTA+M G+LL G + L+ +E KL+ELEP+ YV LSN+YA
Sbjct: 367 AFDIIKCMPFEPTAAMWGSLLLGSKSRDDLEFSEFAATKLVELEPYNTAYYVQLSNLYAE 426
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALH 393
RW +R M+ G+ K G S VE+ H
Sbjct: 427 AGRWSDVERIRGMMKERGLTKDLGCSSVEVEHQRH 461
>IMGA|Medtr3g151720.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 40296200-40293597 H
EGN_Mt090430 20090702
Length = 867
Score = 266 bits (681), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/430 (34%), Positives = 246/430 (57%), Gaps = 8/430 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY---ESDRFVSNSLIHMYSS 57
ML++ + PD +T + A LL+ + IHGY ++G + V N+++ YS
Sbjct: 441 MLKLDIRPDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSK 500
Query: 58 FRDIPNARKVFDGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+I A K+F + K NLV+ NS++ GY G A +F M E D+ +W+ ++
Sbjct: 501 CGNIEYANKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRV 560
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y ++AL +F +++ G KP+ VT++S++ C + ++ R H Y+I +
Sbjct: 561 YAENDCPEQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSSFE-D 619
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
L L+ +L+D YAKCG I A +F+S + K D+ ++ +MIGG+A HG+ +++L+ FS M
Sbjct: 620 LHLKGTLLDAYAKCGIIGYAYKIFQSSVDK--DLVMFTAMIGGYAMHGMSEKALETFSHM 677
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQ 295
+G+KPD + + ++LSAC+H G + E FD + K +GM P E +AC+VD++AR G
Sbjct: 678 LNMGIKPDHVIFTSILSACSHAGRIAEGLKIFDSIEKIHGMKPTIEQFACVVDLLARGGH 737
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
V+EAY F+ +IPI+ A++ G LL C + +++L V KL ++E + G Y+ LSN+
Sbjct: 738 VSEAYSFVTKIPIEANANIWGTLLGACKTYHEVELGRIVADKLFKIEANDIGNYIVLSNL 797
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFI 415
YA RWD +R+ M +KK G S++E+ + FV D SHP IY L +
Sbjct: 798 YAADDRWDGVMEVRKMMRNKDLKKPAGCSWIEVERTNNIFVVGDCSHPQRNLIYSTLCTL 857
Query: 416 VSQMKHIVDY 425
Q+K +++
Sbjct: 858 DQQVKEPMEF 867
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 122/252 (48%), Gaps = 36/252 (14%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PDH + K+ + LL LG +H Y+ K G+ S S +L++MY
Sbjct: 35 PDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKALLNMY------------ 82
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD-EA 126
AKCG + ++FD D + W+ ++ GY R G D +
Sbjct: 83 -------------------AKCGMLDDCHKLFDQFGRCDPVIWNIVLSGYSRSGKNDADV 123
Query: 127 LAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+ VF M SG P+ VT+ +VL CA G L+ G+ +H YVI + + +LV
Sbjct: 124 MKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAGNALVS 183
Query: 186 MYAKCGAIQ-EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MYAKCG + +A VF S + K DV WN+MI G A +GL+KE+ LFS M VKP+
Sbjct: 184 MYAKCGLVACDAYAVFDSIIHK--DVVSWNAMIAGLAENGLLKEAFSLFSLMMKGSVKPN 241
Query: 245 EITYLNLLSACA 256
T N+L CA
Sbjct: 242 YATVANILPVCA 253
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGP 138
N++L Y K G A +F M +D++SW+ +I GY G++ ++L VF + +
Sbjct: 285 NALLSFYLKVGRTKEAESLFWAMDARDLVSWNTIIAGYALNGEWLKSLHVFGNLVSLEML 344
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LVLRTSLVDMYAKCGAIQEAL 197
+ VTMVS+L ACA L L G+ +H Y++ + +LV YAKCG I+EA
Sbjct: 345 LLDSVTMVSILPACAQLDNLQAGKQVHAYILRHPFLFEDTSAGNALVSFYAKCGYIEEAY 404
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
H F ++ D+ WNS++ F L L M + ++PD +T L ++ CA
Sbjct: 405 HTF--SMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIRPDSVTILTIIHFCA 461
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 133/291 (45%), Gaps = 57/291 (19%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ YAKCG I A F ++ +D++SW+ ++D + K + L++ M +
Sbjct: 388 NALVSFYAKCGYIEEAYHTFSMISRKDLISWNSILDAFGEKRHHSRFLSLLHVMLKLDIR 447
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT---SLVDMYAKCGAIQEA 196
P+ VT+++++ CA L + K + +H Y I + L T +++D Y+KCG I+ A
Sbjct: 448 PDSVTILTIIHFCASLLRVKKVKEIHGYSIRSGSLLCATAPTVGNAILDAYSKCGNIEYA 507
Query: 197 LHVFRS------------------GL------------MKPSDVFIWNSMIGGFACHGLV 226
+F++ GL M +D+ WN M+ +A +
Sbjct: 508 NKMFQNLSEKRNLVTCNSLISGYVGLGSHYDANMIFSGMSETDLTTWNLMVRVYAENDCP 567
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNG 275
+++L+LF ++ G+KPD +T ++L+ C HG +++ + F+ L G
Sbjct: 568 EQALELFLKLQTQGMKPDVVTIMSLIPVCTQMASVHLLRQCHGYIIRSS---FEDLHLKG 624
Query: 276 MTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
++D A+ G + AY+ Q + M A++ G HG
Sbjct: 625 T---------LLDAYAKCGIIGYAYKIF-QSSVDKDLVMFTAMIGGYAMHG 665
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 14/269 (5%)
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEE-MRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMH 165
++W+ I ++EAL+ F ++ S KP+ + ++L +C+ L A + G+ +H
Sbjct: 1 MTWASTIRSLCVDSRHNEALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLH 60
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
YV+ V +L++MYAKCG + + +F D IWN ++ G++ G
Sbjct: 61 SYVVKQGHVSCHVTSKALLNMYAKCGMLDDCHKLFDQ--FGRCDPVIWNIVLSGYSRSGK 118
Query: 226 V-KESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
+ + +F MH G V P +T +L CA G + + K+G +
Sbjct: 119 NDADVMKVFRAMHSSGEVMPSSVTIATVLPVCARSGNLNGGKSVHGYVIKSGFEMDTFAG 178
Query: 284 ACMVDVMARAGQVA-EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE-- 340
+V + A+ G VA +AY I I A++ G +G L A ++ +++
Sbjct: 179 NALVSMYAKCGLVACDAYAVFDSI-IHKDVVSWNAMIAGLAENGLLKEAFSLFSLMMKGS 237
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMR 369
++P+ Y ++N+ + +D+ + R
Sbjct: 238 VKPN----YATVANILPVCASFDENIAHR 262
>IMGA|Medtr4g021980.1 Site-specific DNA-methyltransferase
(cytosine-N4-specific) chr04_pseudomolecule_IMGAG_V3
4323791-4321118 H EGN_Mt090430 20090702
Length = 648
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 231/420 (55%), Gaps = 35/420 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
LR+ V P+ TF + A L LG IHG ++K + + VSN+L+ M
Sbjct: 251 FLRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDM------ 304
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
Y KC ++ A+++FD +PE+D++SW+ +I G V+
Sbjct: 305 -------------------------YVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQY 339
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
E+L +F EM SG +P+ V + SVL ACA LG LD GR +H Y+ + + + +
Sbjct: 340 QCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIG 399
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSL+DMYAKCG I+ A +F L+ ++ WN+ IGG A +G +E+L F + G
Sbjct: 400 TSLIDMYAKCGCIEMAQQMFN--LLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESG 457
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN--GMTPKSEHYACMVDVMARAGQVAE 298
+P+EIT+L + SAC H GLV E +F + ++P EHY CMVD++ RA V E
Sbjct: 458 TRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEE 517
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + ++P+ P ++GALL+ +G ++L + + + E + G YV LSN YA
Sbjct: 518 AMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYAN 577
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
++W + RS+R M+ G+ K+PG S + + G H+FV D +HP SE I+++L + +Q
Sbjct: 578 NKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIHVLLNILANQ 637
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 160/336 (47%), Gaps = 51/336 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLA----IHGYITKAGYESDRFVSNSLIHMYSSFRD 60
G PD T P + K+ A R G+A IH K D FV NS +H+YS
Sbjct: 157 GFVPDVYTVPAVLKSCA----RFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYS---- 208
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
CGD A +VFD MP +DV+SW+ LI GY++
Sbjct: 209 ---------------------------ICGDTVGASKVFDFMPVRDVVSWTGLISGYMKA 241
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +++A+A+F M V+ PN T VS+L AC LG L+ G+ +H V LV+
Sbjct: 242 GLFNDAVALFLRMDVA---PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVS 298
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KC ++ +A +F + D+ W SMI G + +ESLDLF EM G
Sbjct: 299 NTLMDMYVKCESVTDAKRLFDE--IPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSG 356
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+PD + ++LSACA GL+ + + + + + ++D+ A+ G + A
Sbjct: 357 FEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQ 416
Query: 301 QFLCQIP---IQPTASMLGAL-LNGCMNHGKLDLAE 332
Q +P I+ + +G L +NG HG+ L +
Sbjct: 417 QMFNLLPSKNIRTWNAYIGGLAING---HGQEALKQ 449
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+I GY A+ ++ + +G P+ T+ +VL +CA + + + +H + +
Sbjct: 133 IISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTD 192
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L + ++ S V +Y+ CG A VF M DV W +I G+ GL +++ L
Sbjct: 193 LWCDMFVQNSFVHVYSICGDTVGASKVF--DFMPVRDVVSWTGLISGYMKAGLFNDAVAL 250
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK--NGMTPKSEH------YA 284
F M V P+ T++++L AC G + LGK +G+ K H
Sbjct: 251 FLRMD---VAPNAATFVSILGACGKLGCLN--------LGKGIHGLVSKYPHGKELVVSN 299
Query: 285 CMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDL 330
++D+ + V +A + +IP I SM+ L+ LDL
Sbjct: 300 TLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDL 348
>IMGA|Medtr4g021790.1 Site-specific DNA-methyltransferase
(cytosine-N4-specific) chr04_pseudomolecule_IMGAG_V3
4254307-4251634 H EGN_Mt090430 20090702
Length = 648
Score = 266 bits (679), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 147/420 (35%), Positives = 231/420 (55%), Gaps = 35/420 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
LR+ V P+ TF + A L LG IHG ++K + + VSN+L+ M
Sbjct: 251 FLRMDVAPNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVSNTLMDM------ 304
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
Y KC ++ A+++FD +PE+D++SW+ +I G V+
Sbjct: 305 -------------------------YVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQY 339
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
E+L +F EM SG +P+ V + SVL ACA LG LD GR +H Y+ + + + +
Sbjct: 340 QCPQESLDLFYEMLGSGFEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIG 399
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSL+DMYAKCG I+ A +F L+ ++ WN+ IGG A +G +E+L F + G
Sbjct: 400 TSLIDMYAKCGCIEMAQQMFN--LLPSKNIRTWNAYIGGLAINGHGQEALKQFGYLVESG 457
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN--GMTPKSEHYACMVDVMARAGQVAE 298
+P+EIT+L + SAC H GLV E +F + ++P EHY CMVD++ RA V E
Sbjct: 458 TRPNEITFLAVFSACCHSGLVDEGRSYFKQMTSPPYNLSPWLEHYGCMVDLLCRAELVEE 517
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + ++P+ P ++GALL+ +G ++L + + + E + G YV LSN YA
Sbjct: 518 AMELINKMPMPPDVQIIGALLSASSTYGNVELTPEMLKTVRNFECQESGVYVLLSNWYAN 577
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
++W + RS+R M+ G+ K+PG S + + G H+FV D +HP SE I+++L + +Q
Sbjct: 578 NKKWAEVRSVRRLMKEKGISKAPGSSLIRVDGKSHKFVVGDNNHPQSEDIHVLLNILANQ 637
Score = 143 bits (361), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 160/336 (47%), Gaps = 51/336 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLA----IHGYITKAGYESDRFVSNSLIHMYSSFRD 60
G PD T P + K+ A R G+A IH K D FV NS +H+YS
Sbjct: 157 GFVPDVYTVPAVLKSCA----RFSGIAEVKQIHTLAVKTDLWCDMFVQNSFVHVYS---- 208
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
CGD A +VFD MP +DV+SW+ LI GY++
Sbjct: 209 ---------------------------ICGDTVGASKVFDFMPVRDVVSWTGLISGYMKA 241
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +++A+A+F M V+ PN T VS+L AC LG L+ G+ +H V LV+
Sbjct: 242 GLFNDAVALFLRMDVA---PNAATFVSILGACGKLGCLNLGKGIHGLVSKYPHGKELVVS 298
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMY KC ++ +A +F + D+ W SMI G + +ESLDLF EM G
Sbjct: 299 NTLMDMYVKCESVTDAKRLFDE--IPEKDIVSWTSMISGLVQYQCPQESLDLFYEMLGSG 356
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+PD + ++LSACA GL+ + + + + + ++D+ A+ G + A
Sbjct: 357 FEPDGVILTSVLSACASLGLLDYGRWVHEYIDHSRIKWDVHIGTSLIDMYAKCGCIEMAQ 416
Query: 301 QFLCQIP---IQPTASMLGAL-LNGCMNHGKLDLAE 332
Q +P I+ + +G L +NG HG+ L +
Sbjct: 417 QMFNLLPSKNIRTWNAYIGGLAING---HGQEALKQ 449
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 100/229 (43%), Gaps = 24/229 (10%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+I GY A+ ++ + +G P+ T+ +VL +CA + + + +H + +
Sbjct: 133 IISGYGAGNFPWAAIRIYRWVVGNGFVPDVYTVPAVLKSCARFSGIAEVKQIHTLAVKTD 192
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L + ++ S V +Y+ CG A VF M DV W +I G+ GL +++ L
Sbjct: 193 LWCDMFVQNSFVHVYSICGDTVGASKVF--DFMPVRDVVSWTGLISGYMKAGLFNDAVAL 250
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK--NGMTPKSEH------YA 284
F M V P+ T++++L AC G + LGK +G+ K H
Sbjct: 251 FLRMD---VAPNAATFVSILGACGKLGCLN--------LGKGIHGLVSKYPHGKELVVSN 299
Query: 285 CMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDL 330
++D+ + V +A + +IP I SM+ L+ LDL
Sbjct: 300 TLMDMYVKCESVTDAKRLFDEIPEKDIVSWTSMISGLVQYQCPQESLDL 348
>IMGA|Medtr5g047050.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 19826704-19824982 E
EGN_Mt090430 20090702
Length = 565
Score = 264 bits (674), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 163/444 (36%), Positives = 238/444 (53%), Gaps = 45/444 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+FPD T+PF+ KA A L G +H ++ K G+E D ++ NSLIH Y+S + AR
Sbjct: 81 LFPDKHTYPFVLKACAYLFSLFEGKQVHAHVLKLGFELDTYICNSLIHFYASCGYLETAR 140
Query: 66 KVFDGI-PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KVFD + +N+VSWN M+D YAK GDYD
Sbjct: 141 KVFDRMCEWRNVVSWNVMIDSYAKV-------------------------------GDYD 169
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI---DNELPLTLVLRT 181
L +F EM + +P+ TM SV+ AC LG+L G +H +V+ D + +++ T
Sbjct: 170 IVLIMFCEM-MKVYEPDCYTMQSVIRACGGLGSLSLGMWVHAFVLKKCDKNVVCDVLVNT 228
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVG 240
LVDMY KCG+++ A VF M DV WNS+I GFA HG K +LD F M +
Sbjct: 229 CLVDMYCKCGSLEIAKQVFEG--MSYRDVSSWNSIILGFAVHGKAKAALDYFVRMVKVEK 286
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+ P+ IT++ +LSAC H G+V E +F+ + K + P HY C+VD+ ARAG + EA
Sbjct: 287 IVPNSITFVGVLSACNHSGMVDEGLMYFEMMTKEYNVEPSLVHYGCLVDLYARAGHIQEA 346
Query: 300 YQFLCQIPIQPTASMLGALLNGCM-NHGKLDLAETVGRKLIELEPHQ-DGRYVGLSNVYA 357
+ ++PI+P A + +LL+ C H ++L+E + +++ E G YV LS VYA
Sbjct: 347 LNVVSEMPIKPDAVIWRSLLDACYKQHASVELSEEMAKQIFESNGSVCGGAYVLLSKVYA 406
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
RW+ +R+ M GV K PG S +E++GA H F A D +HP S+ IY + I
Sbjct: 407 SASRWNDVGLLRKLMNDKGVSKKPGCSLIEINGAAHEFFAGDTNHPQSKDIYKFMNEIQE 466
Query: 418 QMK---HIVDYENQEYYFYDNEGK 438
+++ ++ DY NEGK
Sbjct: 467 KLESVGYLPDYSGAPLIDEINEGK 490
>IMGA|Medtr4g024720.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 5701768-5704573 E
EGN_Mt090430 20090702
Length = 494
Score = 263 bits (672), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 140/384 (36%), Positives = 225/384 (58%), Gaps = 8/384 (2%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D T FLA A A L G +H + K G+E+ FV L+HMYS++ + +A +VF
Sbjct: 113 DSFTLTFLAHACANLDTTHFGFHLHCIVCKMGFENHVFVQTGLLHMYSNWGFLVDAAQVF 172
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+P +N V+WN + G K G + AR VFD M + V+SW+ +IDGY R +ALA
Sbjct: 173 GEMPDRNTVTWNVFISGLIKWGQLEFARSVFDRMVVRSVVSWTLVIDGYTRMNKPLKALA 232
Query: 129 VFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID---NELPLTLVLRTSLV 184
+F +M V G +PNEVT+++V A AHLG + +H YV N + + +V +L+
Sbjct: 233 LFRKMIEVDGIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIV--NALI 290
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
D+YAKCG I+ A +F + WNS++ G+A G+V+E++D F +M GV+P+
Sbjct: 291 DLYAKCGCIESASGLFSEMPDWRRNSVSWNSVMSGYATFGMVREAVDTFEKMEKAGVRPN 350
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ +L++LSAC+H GLV+E FF + + G+ P +HY C++D++ RAG++ EA +
Sbjct: 351 HVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHYGCVIDMLGRAGRLGEAEKVA 410
Query: 304 CQIPIQPTASML-GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
++P + ++ LL C H +++ + V +K++E+E G YV +SN++A R+
Sbjct: 411 LEVPHEAANDVIWRTLLGACSVHDNVEIGKRVTKKILEMEKGHGGDYVLMSNIFASVGRF 470
Query: 363 DKARSMREAMERMGVKKSPGYSFV 386
+RE +++ V K PGYS V
Sbjct: 471 KDVERLREMIDKRNVFKLPGYSIV 494
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 106/227 (46%), Gaps = 35/227 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYES-DRFVSNSLIHMYSSFRDIPN 63
G+ P+ +T + A A L ++ ++HGY+ K G+ + D + N+LI +Y+ I +
Sbjct: 242 GIEPNEVTLLTVFPAIAHLGNVKMCESVHGYVEKRGFNAVDIRIVNALIDLYAKCGCIES 301
Query: 64 ARKVFDGIP--VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
A +F +P +N VSWNS++ GYA G M R
Sbjct: 302 ASGLFSEMPDWRRNSVSWNSVMSGYATFG---MVR------------------------- 333
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLR 180
EA+ FE+M +G +PN V +S+L AC+H G +++G V D L +
Sbjct: 334 ---EAVDTFEKMEKAGVRPNHVAFLSILSACSHSGLVEEGLEFFGKMVNDYGLVPDIKHY 390
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
++DM + G + EA V + ++ IW +++G + H V+
Sbjct: 391 GCVIDMLGRAGRLGEAEKVALEVPHEAANDVIWRTLLGACSVHDNVE 437
>IMGA|Medtr7g080560.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 17167123-17169260 E
EGN_Mt090430 20090702
Length = 707
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 146/373 (39%), Positives = 222/373 (59%), Gaps = 5/373 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + +++ Y+ + A ++F+ +PVK +V+ N M+ + G++ AR +F+
Sbjct: 235 ERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGLAGEMHRARMMFEG 294
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
M E+D +W+ +I + RKG EAL +F M+ G N +M+SVL CA L +LD G
Sbjct: 295 MKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMISVLSVCASLASLDHG 354
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
R +H ++ +E L + + L+ MY KCG + A +F L K DV +WNSMI G++
Sbjct: 355 RQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFLFK--DVVMWNSMITGYS 412
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKS 280
HGL +E+L++F +M GV+PDE+T++ +LSAC++ G VKE + F+ + + P
Sbjct: 413 QHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGI 472
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
EHYACMVD++ RAG+V EA + + ++P++P A + GALL C NH KLDLAE KL +
Sbjct: 473 EHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGALLGACRNHMKLDLAEVAVEKLAK 532
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHD- 399
LEP G YV LS++YA RW +R+ + R V K PG S++E+ +H F D
Sbjct: 533 LEPKNAGPYVLLSHMYATKGRWRDVEVLRKKINRR-VIKFPGCSWIEVEKKVHMFTGGDS 591
Query: 400 KSHPSSEQIYMML 412
KSHP I ML
Sbjct: 592 KSHPEQHMITQML 604
Score = 118 bits (295), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 159/329 (48%), Gaps = 46/329 (13%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N+++ Y +A +FD +P +N VS+N M+ GY K G ++ AR+VFD+MPE++V+
Sbjct: 56 NAMVSAYFESHKPRDALLLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVMPERNVV 115
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ ++ GYV++G +EA +F EM P+ N V+ ++ +D + + +
Sbjct: 116 SWTSMVRGYVQEGMVEEAEKLFWEM----PRRNVVSWTVMIGGLLKESRIDDAKKLFDMI 171
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ + +V+ T+++ Y + G + EA +F MK +VF W +M+ G+A +G V
Sbjct: 172 PEKD----VVVVTNMIGGYCQVGRLDEARELFDE--MKVRNVFTWTTMVSGYAKNGRVDV 225
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL----------------- 271
+ LF M + +E+++ +L G +KEA+ F+ +
Sbjct: 226 ARKLFEVMP----ERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACNEMILQFGL 281
Query: 272 -GK--------NGMTPKSE-HYACMVDVMARAGQVAEAYQFLCQIPIQPTA----SMLGA 317
G+ GM + E + M+ V R G EA ++ + A SM+ +
Sbjct: 282 AGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEALGLFARMQREGVALNFPSMI-S 340
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+L+ C + LD V +L+ E QD
Sbjct: 341 VLSVCASLASLDHGRQVHARLVRSEFDQD 369
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/215 (30%), Positives = 102/215 (47%), Gaps = 41/215 (19%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D V ++I Y + AR++FD + V+N+ +W +M+ GYAK G + +AR++F++
Sbjct: 173 EKDVVVVTNMIGGYCQVGRLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEV 232
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MPE++ +SW+ ++ GY + G EA +FE M V + AC
Sbjct: 233 MPERNEVSWTAMLMGYTQSGRMKEAFELFEAMPVKW-----------IVAC--------- 272
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
NE+ L L G + A +F MK D WN+MI F
Sbjct: 273 ---------NEMILQFGL----------AGEMHRARMMFEG--MKERDEGTWNAMIKVFE 311
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
GL E+L LF+ M GV + + +++LS CA
Sbjct: 312 RKGLDLEALGLFARMQREGVALNFPSMISVLSVCA 346
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 119/275 (43%), Gaps = 38/275 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV + + + A L + G +H + ++ ++ D +V++ LI MY D
Sbjct: 326 MQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGD 385
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A+ +F+ K++V WNSM+ GY++
Sbjct: 386 LVRAKGIFNRFLFKDVVMWNSMITGYSQ-------------------------------H 414
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
G +EAL VF +M SG +P+EVT + VL AC++ G + +G + ++ +
Sbjct: 415 GLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEH 474
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+VD+ + G + EA+ + M+P D +W +++G AC +K L + +
Sbjct: 475 YACMVDLLGRAGRVDEAMELVEKMPMEP-DAIVWGALLG--ACRNHMKLDLAEVAVEKLA 531
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
++P LLS H K W + L K
Sbjct: 532 KLEPKNAGPYVLLS---HMYATKGRWRDVEVLRKK 563
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 120/271 (44%), Gaps = 49/271 (18%)
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFD--LMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+ ++L S S + Y + GDI AR+VFD +P++ + SW+ ++ Y +AL
Sbjct: 14 VQARSLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALL 73
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F++M P+ N V+ ++ G + R V D +V TS+V Y
Sbjct: 74 LFDQM----PQRNTVSFNGMISGYVKNGMVADAR----KVFDVMPERNVVSWTSMVRGYV 125
Query: 189 KCGAIQEALHVFRS--------------GLMKPS---------------DVFIWNSMIGG 219
+ G ++EA +F GL+K S DV + +MIGG
Sbjct: 126 QEGMVEEAEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGG 185
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+ G + E+ +LF EM + V T+ ++S A G V A F+ M +
Sbjct: 186 YCQVGRLDEARELFDEMKVRNV----FTWTTMVSGYAKNGRVDVARKLFEV-----MPER 236
Query: 280 SE-HYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+E + M+ ++G++ EA++ +P++
Sbjct: 237 NEVSWTAMLMGYTQSGRMKEAFELFEAMPVK 267
>IMGA|Medtr2g122730.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 29562117-29560255 E
EGN_Mt090430 20090702
Length = 620
Score = 262 bits (670), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 143/413 (34%), Positives = 232/413 (56%), Gaps = 35/413 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ PD+ T PF+ KA + L G +IH Y+ K+G+E D FV +LI MY
Sbjct: 139 MLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMY----- 193
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCG + A +VFD + +D + W+ ++ Y +
Sbjct: 194 --------------------------AKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQN 227
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G DE++++ EM +G +P E T+V+V+ + A + L GR +H + + ++
Sbjct: 228 GHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKVK 287
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+L+DMYAKCG+++ AL +F ++ V WN++I G+A HGL +LDLF +M
Sbjct: 288 TALIDMYAKCGSVKVALALFER--LREKRVVSWNAIITGYAMHGLAVGALDLFDKMRKED 345
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+PD IT++ +L+AC+ G L+ E ++ + ++ G+TP +HY CM+D++ GQ+ EA
Sbjct: 346 -RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLDEA 404
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y + + ++P + + GALLN C HG ++LAE KLIELEP G YV L+N+YA
Sbjct: 405 YDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYAQS 464
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+W+ +R+ M +KK+ S++E+ ++ F+A D SH +S+ IY L
Sbjct: 465 GKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAEL 517
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 3/289 (1%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YA + AR +FD +P+Q++ W+ LI GY G +D A+ ++ +M G +P+ T+
Sbjct: 92 YAVSNSLLNARNLFDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTL 151
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VL AC+ L A+ +GR +H YVI + L + +L+DMYAKCG + +A VF ++
Sbjct: 152 PFVLKACSALSAIGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVV 211
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ D +WNSM+ +A +G ES+ L EM GV+P E T + ++S+ A +
Sbjct: 212 R--DAVLWNSMLAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGR 269
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
++G + ++D+ A+ G V A ++ + S A++ G H
Sbjct: 270 EIHGFGWRHGFQSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSW-NAIITGYAMH 328
Query: 326 GKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMER 374
G A + K+ + + +VG+ + R D+ R++ M R
Sbjct: 329 GLAVGALDLFDKMRKEDRPDHITFVGVLAACSRGRLLDEGRALYNLMVR 377
>IMGA|Medtr7g005540.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 483371-480802 E
EGN_Mt090430 20090702
Length = 601
Score = 262 bits (669), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/382 (39%), Positives = 224/382 (58%), Gaps = 7/382 (1%)
Query: 44 DRFVS--NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
DR V+ N +I Y + AR +FD + VKN++SW SM+ GY++ GD+ AR +FD
Sbjct: 217 DRDVAAFNVMIDGYVKMGRMDLARDLFDKMRVKNVISWTSMVHGYSEDGDVDEARFLFDC 276
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDK 160
MPE++VLSW+ +I GY + G +AL +F EMR + + NEVT+VSVL A A L ALD
Sbjct: 277 MPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDL 336
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +H +V N+L ++ + +LVDMYAKCG I +A VF M D WN++I G+
Sbjct: 337 GGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEE--MTEKDTGSWNALINGY 394
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
+G KE+L++F+ M G +P++IT ++LSAC H GLV+E F+ + + G+ P+
Sbjct: 395 GVNGCAKEALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMERFGIVPQI 454
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
EHY CM+D++ RAG++ EA + + +P P +L + L C + AE + + ++
Sbjct: 455 EHYGCMIDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFLFACCYFEDVSRAERILKVAVK 514
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVA--H 398
+E G YV L N+YA RRW ++E M++ G K +S +E+ G FVA +
Sbjct: 515 MEKEGAGDYVMLRNLYATERRWADVEDVKEMMKKRGSNKEVAWSVIEVDGRFREFVAGYY 574
Query: 399 DKSHPSSEQIYMMLGFIVSQMK 420
SH E I LG + MK
Sbjct: 575 SHSHSHLEAIQSTLGQLWKHMK 596
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 108/376 (28%), Positives = 181/376 (48%), Gaps = 52/376 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P TF + K + + G IHG + K + D +V SL+ MY F D+ ARKV
Sbjct: 121 PSSYTFTLILKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKV 180
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + V++LVSW +++ GYA+CGD+ AR++FD M ++DV +++ +IDGYV+ G D A
Sbjct: 181 FDEMSVRSLVSWTAVIVGYARCGDMVEARKLFDGMVDRDVAAFNVMIDGYVKMGRMDLAR 240
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F++MRV ++ TS+V Y
Sbjct: 241 DLFDKMRVK---------------------------------------NVISWTSMVHGY 261
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH-IVGVKPDEI 246
++ G + EA +F M +V WN+MI G+ +G ++L LF EM V V+ +E+
Sbjct: 262 SEDGDVDEARFLF--DCMPEKNVLSWNAMIRGYCQNGRSHDALKLFCEMRGNVDVEMNEV 319
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
T +++L A A + + + +N + +VD+ A+ G++ +A ++
Sbjct: 320 TVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGKAKLVFEEM 379
Query: 307 PIQPTASMLGALLNG-CMNHGKLDLAETVGRKLIE-LEPHQDGRYVGLSNVYAIFRRW-- 362
+ T S AL+NG +N + E L E EP+Q + +++V +
Sbjct: 380 TEKDTGS-WNALINGYGVNGCAKEALEVFAMMLREGFEPNQ----ITMTSVLSACNHCGL 434
Query: 363 -DKARSMREAMERMGV 377
++ R EAMER G+
Sbjct: 435 VEEGRRCFEAMERFGI 450
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
V V + +T + A A L +LG +HG++ + + V N+L+ MY+ +I
Sbjct: 312 VDVEMNEVTVVSVLPAVADLSALDLGGWVHGFVQRNQLDGSVHVCNALVDMYAKCGEIGK 371
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
A+ VF+ + K+ SWN++++GY ++G +
Sbjct: 372 AKLVFEEMTEKDTGSWNALINGYG--------------------------VNGCAK---- 401
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EAL VF M G +PN++TM SVL AC H G +++GR + + + +
Sbjct: 402 -EALEVFAMMLREGFEPNQITMTSVLSACNHCGLVEEGRRCFEAMERFGIVPQIEHYGCM 460
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
+D+ + G + EA + ++ P+++ + + + FAC
Sbjct: 461 IDLLGRAGRLDEAEKLIQAMPYDPNEIILTSFL---FAC 496
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 111/283 (39%), Gaps = 58/283 (20%)
Query: 92 ISMARQVFDLMPEQDVLSWSC--LIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSV 148
+ AR F+ P + C +I+ + ++ ++ + + +P+ T +
Sbjct: 70 VQHARLFFNHTPPHKCDEFLCNTIINAHFSLRQFNHGFTLYNQFSKDCFFRPSSYTFTLI 129
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM---------------------- 186
L C+ A +G +H V+ N L L + TSLVDM
Sbjct: 130 LKGCSVSDAKRQGFQIHGVVLKNWFCLDLYVGTSLVDMYVKFGDVGFARKVFDEMSVRSL 189
Query: 187 ---------YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
YA+CG + EA +F M DV +N MI G+ G + + DLF +M
Sbjct: 190 VSWTAVIVGYARCGDMVEARKLFDG--MVDRDVAAFNVMIDGYVKMGRMDLARDLFDKMR 247
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+ V I++ +++ + G V EA + FDC+ + + + M+ + G+
Sbjct: 248 VKNV----ISWTSMVHGYSEDGDVDEARFLFDCMPEKNVLS----WNAMIRGYCQNGRSH 299
Query: 298 EAYQFLCQ--------------IPIQPTASMLGALLNGCMNHG 326
+A + C+ + + P + L AL G HG
Sbjct: 300 DALKLFCEMRGNVDVEMNEVTVVSVLPAVADLSALDLGGWVHG 342
>IMGA|Medtr5g023020.1 Phospholipase D/Transphosphatidylase
chr05_pseudomolecule_IMGAG_V3 9004978-9009005 H
EGN_Mt090430 20090702
Length = 889
Score = 261 bits (668), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 133/399 (33%), Positives = 222/399 (55%), Gaps = 9/399 (2%)
Query: 29 GLAIHGYITKAGY------ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSM 82
GL +G I +A + D NS+I Y + A +F +PVKN VSWN+M
Sbjct: 337 GLIQNGRIDEASQVFSQLNKRDAICWNSMIAGYCQSGRMSEALNLFRQMPVKNAVSWNTM 396
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
+ GYA+ G++ A ++F+ M ++V+SW+ LI G+++ G Y +AL M G KP++
Sbjct: 397 ISGYAQAGEMDRATEIFEAMGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQ 456
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
T L +CA+L AL G+ +H ++ + L + +L+ MYAKCG +Q A VF+
Sbjct: 457 STFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKD 516
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
++ D+ WNS+I G+A +G E+ F +M G PDE+T++ +LSAC+H GL
Sbjct: 517 --IEGVDLISWNSLISGYALNGYANEAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTN 574
Query: 263 EAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
+ F C+ + + P +EHY+C+VD++ R G++ EA+ + + ++ A + G+LL
Sbjct: 575 QGVDLFKCMIEGFAIEPLAEHYSCLVDLLGRMGRLEEAFNIVRGMKVKANAGLWGSLLAA 634
Query: 322 CMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSP 381
C H ++L + +L+ELEPH Y+ LSN++A RW+ +R M K P
Sbjct: 635 CRVHKNMELGKIAALRLLELEPHNASNYITLSNMHAEAGRWEDVERLRVLMRERRAGKLP 694
Query: 382 GYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
G S++E+ + FV+ D +E I ++L + + M+
Sbjct: 695 GCSWIEVQNQIQNFVSDDPGKLRTESIKIILNTLSAHMR 733
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 145/309 (46%), Gaps = 22/309 (7%)
Query: 29 GLAIHGYITKAGYESDRF-----VS-NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSM 82
G A HG I +A DR VS N++I Y I A K+F P K+ VSW +M
Sbjct: 244 GFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQDLQIDEAVKLFKETPYKDCVSWTTM 303
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
++GY + G + AR+V++ MP +DV + + L+ G ++ G DEA VF ++ K +
Sbjct: 304 INGYVRVGKLDEAREVYNQMPYKDVAAKTALMSGLIQNGRIDEASQVFSQLN----KRDA 359
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVLRTSLVDMYAKCGAIQEALHVFR 201
+ S++ G GRM + ++P+ V +++ YA+ G + A +F
Sbjct: 360 ICWNSMIA-----GYCQSGRMSEALNLFRQMPVKNAVSWNTMISGYAQAGEMDRATEIFE 414
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+ M +V WNS+I GF +GL ++L M G KPD+ T+ LS+CA+ +
Sbjct: 415 A--MGVRNVISWNSLITGFLQNGLYLDALKSLVLMGQEGKKPDQSTFACSLSSCANLAAL 472
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP----IQPTASMLGA 317
+ + + K+G ++ + A+ G V A + I I + + G
Sbjct: 473 QVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSAEKVFKDIEGVDLISWNSLISGY 532
Query: 318 LLNGCMNHG 326
LNG N
Sbjct: 533 ALNGYANEA 541
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 151/318 (47%), Gaps = 43/318 (13%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
NS++ +++ + +AR++FD + +NLVSWN+M+ GY + A ++FDLM E+D
Sbjct: 52 NSMVTVFAKNGRVSDARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLMAERDNF 111
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ +I Y RKG ++A +FE + P + + + A G KGR
Sbjct: 112 SWALMITCYTRKGMLEKARELFELV----PDKLDTACWNAMIA----GYAKKGRFDDAEK 163
Query: 169 IDNELPLT-LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ ++P+ LV S++ Y + G + A+ F M +V WN M+ GF + +
Sbjct: 164 VFEKMPVKDLVSYNSMLAGYTQNGKMGLAMKFFER--MAERNVVSWNLMVAGFVNNCDLG 221
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD------CLGKNGM----- 276
+ +LF ++ P+ ++++ +L A G + EA FD + N M
Sbjct: 222 SAWELFEKIP----DPNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYV 277
Query: 277 --------------TPKSE--HYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
TP + + M++ R G++ EA + Q+P + A+ AL++
Sbjct: 278 QDLQIDEAVKLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQMPYKDVAAKT-ALMS 336
Query: 321 GCMNHGKLDLAETVGRKL 338
G + +G++D A V +L
Sbjct: 337 GLIQNGRIDEASQVFSQL 354
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 122/257 (47%), Gaps = 36/257 (14%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD TF + A L ++G +H I K+GY +D FVSN+LI MY+ + +A
Sbjct: 451 GKKPDQSTFACSLSSCANLAALQVGKQLHELILKSGYINDLFVSNALIAMYAKCGGVQSA 510
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KVF I +L+SWNS++ GYA ++GY +
Sbjct: 511 EKVFKDIEGVDLISWNSLISGYA--------------------------LNGYA-----N 539
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS-L 183
EA FE+M G P+EVT + +L AC+H G ++G + +I+ L S L
Sbjct: 540 EAFWAFEQMSSEGTVPDEVTFIGMLSACSHAGLTNQGVDLFKCMIEGFAIEPLAEHYSCL 599
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD+ + G ++EA ++ R G+ ++ +W S++ AC L + + ++ ++P
Sbjct: 600 VDLLGRMGRLEEAFNIVR-GMKVKANAGLWGSLLA--ACRVHKNMELGKIAALRLLELEP 656
Query: 244 -DEITYLNLLSACAHGG 259
+ Y+ L + A G
Sbjct: 657 HNASNYITLSNMHAEAG 673
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 153/342 (44%), Gaps = 31/342 (9%)
Query: 37 TKAGYESDR--FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISM 94
T++ E + F N I I A++VF + KN ++NSM+ +AK G +S
Sbjct: 7 TRSTLEQSKNVFNQNKKIIYLGKQGKIDEAKRVFSNVIHKNHATYNSMVTVFAKNGRVSD 66
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
ARQ+FD M +++++SW+ +I GY+ +EA +F+ M + N + + C
Sbjct: 67 ARQLFDKMSQRNLVSWNTMIAGYLHNNMVEEAHKLFDLM---AERDNFSWALMITCY-TR 122
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
G L+K R + V D L +++ YAK G +A VF M D+ +N
Sbjct: 123 KGMLEKARELFELVPD---KLDTACWNAMIAGYAKKGRFDDAEKVFEK--MPVKDLVSYN 177
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
SM+ G+ +G + ++ F M V + ++ C G AW F+ +
Sbjct: 178 SMLAGYTQNGKMGLAMKFFERMAERNVVSWNLMVAGFVNNCDLGS----AWELFEKIPD- 232
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS---MLGALLNGCMNHGKLDLA 331
P + + M+ AR G++ EA + ++P + S M+ A + L +
Sbjct: 233 ---PNAVSWVTMLCGFARHGKIVEARKLFDRMPCKNVVSWNAMIAAYVQ------DLQID 283
Query: 332 ETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMREAM 372
E V KL + P++D + + N Y + D+AR + M
Sbjct: 284 EAV--KLFKETPYKDCVSWTTMINGYVRVGKLDEAREVYNQM 323
>IMGA|Medtr7g106280.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 24540441-24544960 E
EGN_Mt090430 20090702
Length = 1062
Score = 261 bits (667), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 151/451 (33%), Positives = 241/451 (53%), Gaps = 48/451 (10%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV--------------- 73
G+ IH ++ K G +SD FVSN+LI+MYS F A + F G+ +
Sbjct: 241 GVLIHLHVLKHGLDSDVFVSNALINMYSKFGS--TALRFFKGMQLGGIRPDLLTVVSLTS 298
Query: 74 -------------------------KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
K++V N++++ YAK G ++ A VFD +P +D +
Sbjct: 299 IFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQLPRKDTI 358
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
SW+ L+ GY + G EA+ + M PN+ T VS++ A +H+GAL +G +H
Sbjct: 359 SWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMKIHAK 418
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI-WNSMIGGFACHGLV 226
+I N L L + + T L+D+Y KCG +++A+ +F P D + WN++I HG
Sbjct: 419 LIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYE---IPRDTSVPWNAIIASLGIHGRG 475
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYAC 285
+E+L LF +M VK D IT+++LLSAC+H GLV E FD + K G+ P +HY C
Sbjct: 476 EEALQLFKDMLAERVKADHITFVSLLSACSHSGLVDEGQKCFDIMQKEYGIKPSLKHYGC 535
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQ 345
MVD++ RAG + +AY+ + +PIQP AS+ GALL+ C +G +L +L+E++
Sbjct: 536 MVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSEN 595
Query: 346 DGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSS 405
G YV LSN+YA +W+ +R G++K+PG+S V + F +++HP
Sbjct: 596 VGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVGSKAEVFYTGNQTHPKY 655
Query: 406 EQIYMMLGFIVSQMKHIVDYENQEYYFYDNE 436
+IY L + ++MK + + + + D E
Sbjct: 656 TEIYKELKVLSAKMKSLGYVPDYSFVYQDIE 686
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/361 (26%), Positives = 171/361 (47%), Gaps = 49/361 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TFP + KA L+ G +H + K G+E D FV+ SL+H+YS + + A KV
Sbjct: 122 PDFYTFPPILKACVSLVD---GKKVHCCVFKMGFEDDVFVAASLVHLYSRYGVLDVAHKV 178
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP------------------------ 103
F +PVK++ SWN+M+ G+ + G+ + A V + M
Sbjct: 179 FVDMPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDV 238
Query: 104 ---------------EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
+ DV + LI+ Y + G AL F+ M++ G +P+ +T+VS+
Sbjct: 239 INGVLIHLHVLKHGLDSDVFVSNALINMYSKFG--STALRFFKGMQLGGIRPDLLTVVSL 296
Query: 149 LCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+ L R + +VI E L +V+ +LV+MYAK G + A VF +
Sbjct: 297 TSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGYMNCAHTVFDQ--LPR 354
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D WN+++ G+ +GL E++D ++ M P++ T+++++ A +H G +++
Sbjct: 355 KDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPNQGTWVSIIPAYSHVGALQQGMK 414
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
L KN + C++D+ + G++ +A +IP + T+ A++ HG
Sbjct: 415 IHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSLFYEIP-RDTSVPWNAIIASLGIHG 473
Query: 327 K 327
+
Sbjct: 474 R 474
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 96/188 (51%), Gaps = 9/188 (4%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
+N+V +++ Y GDIS++R FD + ++++ SW+ +I YVR G Y EA+ ++
Sbjct: 52 QNIVLSTKLINLYVTHGDISLSRSTFDYIHKKNIFSWNSIISAYVRFGKYHEAMNCVNQL 111
Query: 134 -RVSGP---KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
+ G +P+ T +L AC +L G+ +H V + + SLV +Y++
Sbjct: 112 FSMCGGGHLRPDFYTFPPILKACV---SLVDGKKVHCCVFKMGFEDDVFVAASLVHLYSR 168
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G + A VF M DV WN+MI GF +G +L + + M GVK D IT
Sbjct: 169 YGVLDVAHKVFVD--MPVKDVGSWNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVA 226
Query: 250 NLLSACAH 257
++L CA
Sbjct: 227 SILPVCAQ 234
>IMGA|Medtr4g157180.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 39129950-39127314 H
EGN_Mt090430 20090702
Length = 878
Score = 261 bits (666), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 224/410 (54%), Gaps = 34/410 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+++ G+ P+ LT + A A L +LG +H I K G E+ V +S+ +MY
Sbjct: 471 LIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMY----- 525
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AK G + +A Q F MP +D + W+ +I + +
Sbjct: 526 --------------------------AKSGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQN 559
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + A+ +F +M SG K + V++ + L ACA+ AL G+ +H +V+ N +
Sbjct: 560 GKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELHCFVVRNSFISDTFVA 619
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+DMY+KCG + A VF +M + WNS+I + HG +E LDLF EM G
Sbjct: 620 STLIDMYSKCGKLALARSVF--DMMDWKNEVSWNSIIAAYGNHGRPRECLDLFHEMVEAG 677
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
++PD +T+L ++SAC H GLV E Y+F C+ + G+ + EH+ACMVD+ RAG++ EA
Sbjct: 678 IQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACMVDLYGRAGRLHEA 737
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +P P A G+LL C HG ++LA+ + L+EL+P+ G YV LSNV+A
Sbjct: 738 FDTIKSMPFTPDAGTWGSLLGACRLHGNVELAKLASKHLVELDPNNSGYYVLLSNVHAGA 797
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIY 409
W+ +R M+ GV+K PGYS+++++G H F A D HP S +IY
Sbjct: 798 GEWESVLKVRSLMKEKGVQKIPGYSWIDVNGGTHMFSAADGCHPQSVEIY 847
Score = 146 bits (368), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 95/333 (28%), Positives = 174/333 (52%), Gaps = 34/333 (10%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ ++F L A G+ +HG + ++G+ESD V+N++I MYS
Sbjct: 274 VKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYS--------- 324
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KCG++ AR++FD+MP+ D ++W+ LI GYV+ G DE
Sbjct: 325 ----------------------KCGNLFDARKIFDIMPQTDTVTWNGLIAGYVQNGFTDE 362
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A+A+F+ M SG K + +T S L + G+L + +H Y++ + +P + L+++LVD
Sbjct: 363 AVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVD 422
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
+Y K G ++ A F+ + DV + +MI G+ +GL E+L+LF + G+ P+
Sbjct: 423 IYFKGGDVEMACKTFQQNTL--VDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNC 480
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+T ++L ACA +K + K G+ + + + + A++G++ AYQF +
Sbjct: 481 LTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSGRLDLAYQFFRR 540
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+P++ + +++ N GK +LA + R++
Sbjct: 541 MPVKDSVCWNLMIVSFSQN-GKPELAIDLFRQM 572
Score = 142 bits (359), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 150/325 (46%), Gaps = 37/325 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V PD TFP++ KA L L +H G+ D F+ +SLI +Y+
Sbjct: 168 MLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGY 227
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A+ +FD +PV++ + WN ML+GY K
Sbjct: 228 IHDAKYLFDELPVRDCILWNVMLNGYVK-------------------------------N 256
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD++ AL F+EMR S KPN V+ V +L CA G + G +H VI + +
Sbjct: 257 GDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVA 316
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++ MY+KCG + +A +F +M +D WN +I G+ +G E++ LF M G
Sbjct: 317 NTIITMYSKCGNLFDARKIF--DIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSG 374
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
VK D IT+ + L + G +K + ++G+ + +VD+ + G V A
Sbjct: 375 VKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMAC 434
Query: 301 QFLCQIPIQP----TASMLGALLNG 321
+ Q + TA + G +LNG
Sbjct: 435 KTFQQNTLVDVAVCTAMISGYVLNG 459
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 131/300 (43%), Gaps = 16/300 (5%)
Query: 53 HMYSSFRDIPNA---------RKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQVF 99
+ S FR PN+ R++ + V +L + ML Y C +F
Sbjct: 75 QLESMFRAFPNSDASLVKQQVRQIHAKVLVCGMNGSLTLGSRMLGMYVLCRSFKDVGNLF 134
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
+ L W+ LI G+ G +D AL F M S P++ T V+ AC L +
Sbjct: 135 CRLQLCYSLPWNWLIRGFSMLGCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVP 194
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+M+H + L + +SL+ +Y G I +A ++F + D +WN M+ G
Sbjct: 195 LCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYLFDE--LPVRDCILWNVMLNG 252
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+ +G +L F EM VKP+ ++++ LLS CA G+V+ + ++G
Sbjct: 253 YVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESD 312
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
++ + ++ G + +A + +P T + G L+ G + +G D A + + ++
Sbjct: 313 PTVANTIITMYSKCGNLFDARKIFDIMPQTDTVTWNG-LIAGYVQNGFTDEAVALFKAMV 371
>IMGA|Medtr8g077950.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 15663999-15667969 E
EGN_Mt090430 20090702
Length = 990
Score = 260 bits (665), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 149/454 (32%), Positives = 248/454 (54%), Gaps = 48/454 (10%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +T L +A +LG +HG+ + + SD V + ++ MY+ + AR VF
Sbjct: 415 DCVTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGVLDMYAKCGIMDCARGVF 474
Query: 69 -------------------------------------DGIPVKNLVSWNSMLDGYAKCGD 91
+ +P N+VSWNS++ G+ + G
Sbjct: 475 HFAGKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVP-PNVVSWNSLIFGFFRNGQ 533
Query: 92 ISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ A+ +F M ++++W+ +I G + G EA VF++M+ +G +PN +++ S
Sbjct: 534 VVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVFQQMQGAGMRPNSISITS 593
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
L AC ++ L+ GR +H YV+ N + +L + TS++DMYAKCG + +A VF +
Sbjct: 594 ALSACTNMALLNYGRSIHGYVMRNFMSFSLQITTSIIDMYAKCGNLDDAKFVFI--ICST 651
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
++ ++N+MI +A HG E+L LF E+ G+ PD IT+ ++LSAC+HG L+KE
Sbjct: 652 KELPVYNAMISAYASHGKSAEALALFQELVKQGIMPDHITFTSVLSACSHGRLLKEGLEL 711
Query: 268 FD-CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
F + + M P +HY C+V ++ GQ+ EA + + +P P A +LG+LL C +
Sbjct: 712 FKYMVCELQMKPSEKHYGCLVKLLTNDGQLDEALRIILTMPSPPDAHILGSLLAACGQNH 771
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
+ +LA + + L+++EP+ G YV LSNVYA +WD+ ++R M+ G+KK PG S++
Sbjct: 772 ETELANYIAKWLLKVEPNNPGNYVALSNVYAALGKWDEVSNIRGFMKEKGLKKIPGCSWI 831
Query: 387 EMHGALHRFVAHDKSHPSSEQIYM---MLGFIVS 417
E+ L+ F+A DKSHP E+IY +LGF +S
Sbjct: 832 EVGQELNVFIASDKSHPEKEEIYKILDLLGFEIS 865
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 148/334 (44%), Gaps = 35/334 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P ++ A A L E G H + G+E + + +S+++ YS I
Sbjct: 308 GVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFELNYVLGSSIMNFYSKVGLIEEV 367
Query: 65 RKVFDGIPV-KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
VF + V K+ V+WN M+ Y + G A ++ M E++ L + C
Sbjct: 368 ELVFRSMAVLKDEVTWNLMISSYVQFGMFEKALEMCHWMREEENLRFDC----------- 416
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
VT+ S+L A + G+ +H + I NE + + + +
Sbjct: 417 -------------------VTLSSLLALAADTRDVKLGKKLHGFCIRNEFYSDMAVLSGV 457
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+DMYAKCG + A VF K D+ +WN+M+ A GL E+L LF +M + V P
Sbjct: 458 LDMYAKCGIMDCARGVFHFA-GKKKDIVLWNTMLAACAEKGLSGEALKLFFQMQMESVPP 516
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ +++ +L+ G V EA F + +G+TP + M+ +A+ G EA +
Sbjct: 517 NVVSWNSLIFGFFRNGQVVEAQDMFSEMQLSGVTPNLITWTTMISGLAQNGLGYEASRVF 576
Query: 304 CQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
Q+ ++P + + + L+ C N L+ ++
Sbjct: 577 QQMQGAGMRPNSISITSALSACTNMALLNYGRSI 610
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 95/308 (30%), Positives = 145/308 (47%), Gaps = 54/308 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDR--FVSNSLIHMYSSF 58
M+ G PD+ P KA L G IHG++ K G E D +V+ SL+ MY
Sbjct: 198 MMEKGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKC 257
Query: 59 RDIPNARKVFDGIP--VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
+ +A KVFD +P +N V WNSM I G
Sbjct: 258 GVLEDAEKVFDEMPNRKRNDVVWNSM-------------------------------IVG 286
Query: 117 YVRKGDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
YV+ G EA+ +FE+MR G +P+EV++ ACA+L A+++G+ H VI L
Sbjct: 287 YVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFFSACANLEAVEEGKQGHALVILMGFEL 346
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
VL +S+++ Y+K G I+E VFRS + D WN MI + G+ +++L++
Sbjct: 347 NYVLGSSIMNFYSKVGLIEEVELVFRS-MAVLKDEVTWNLMISSYVQFGMFEKALEMCHW 405
Query: 236 M-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK--NGMTPKSEHYACM------ 286
M ++ D +T +LL+ A VK LGK +G ++E Y+ M
Sbjct: 406 MREEENLRFDCVTLSSLLALAADTRDVK--------LGKKLHGFCIRNEFYSDMAVLSGV 457
Query: 287 VDVMARAG 294
+D+ A+ G
Sbjct: 458 LDMYAKCG 465
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%), Gaps = 39/252 (15%)
Query: 21 ACLLKREL--GLAIHGYITKAG--YESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL 76
C+ R+L GL IH ++ K G Y ++ FV + L+ +Y
Sbjct: 112 GCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILY--------------------- 150
Query: 77 VSWNSMLDGYAKCGDISMARQVF-DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
AKC +A F +++ Q++ S++ ++ R G Y EAL + EM
Sbjct: 151 ----------AKCNLTRVAVHFFRNVVKNQNLFSYAAIVGLQARNGLYKEALLSYVEMME 200
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID--NELPLTLVLRTSLVDMYAKCGAI 193
G P+ + + L AC L + GR +H +V+ NE + + TSLVDMY KCG +
Sbjct: 201 KGFCPDNFVVPNGLKACGGLRWIGFGRGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVL 260
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLL 252
++A VF + + +WNSMI G+ +G+ E++ LF +M GV+P E++
Sbjct: 261 EDAEKVFDEMPNRKRNDVVWNSMIVGYVQNGMNVEAVGLFEKMRFEGGVEPSEVSLSGFF 320
Query: 253 SACAHGGLVKEA 264
SACA+ V+E
Sbjct: 321 SACANLEAVEEG 332
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 82/170 (48%), Gaps = 17/170 (10%)
Query: 148 VLCACAHLGALDKGRMMHHYVID--NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+L C + L G +H ++I + + + LV +YAKC + A+H FR+ ++
Sbjct: 109 LLQGCVYARDLSLGLQIHAHLIKKGSSYSTNEFVESKLVILYAKCNLTRVAVHFFRN-VV 167
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
K ++F + +++G A +GL KE+L + EM G PD N L AC GGL W
Sbjct: 168 KNQNLFSYAAIVGLQARNGLYKEALLSYVEMMEKGFCPDNFVVPNGLKAC--GGL---RW 222
Query: 266 YFFDCLGKNGMTPK--SEHYAC------MVDVMARAGQVAEAYQFLCQIP 307
F G +G K +E C +VD+ + G + +A + ++P
Sbjct: 223 IGFG-RGIHGFVVKMGNEFDGCVYVATSLVDMYGKCGVLEDAEKVFDEMP 271
>IMGA|Medtr5g103280.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 41372234-41369252 H
EGN_Mt090430 20090702
Length = 811
Score = 260 bits (665), Expect = 9e-70, Method: Compositional matrix adjust.
Identities = 145/421 (34%), Positives = 228/421 (54%), Gaps = 34/421 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + V P++ TF + +A A + +LG IH + K G S+ FVSN++
Sbjct: 329 MRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAI--------- 379
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+D YAKCG+I + ++F+ +P+++ ++W+ +I GYV+
Sbjct: 380 ----------------------MDVYAKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQL 417
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD + A+ +F M +P EVT SVL A A L AL+ G +H I V+
Sbjct: 418 GDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVA 477
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+DMYAKCG I +A F M D WN+MI G++ HG+ E+L+LF M
Sbjct: 478 NSLIDMYAKCGRINDARLTFDK--MNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTD 535
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
KP+++T++ +LSAC++ GL+ + F+ + K+ + P EHY CMV ++ R G+ EA
Sbjct: 536 CKPNKLTFVGVLSACSNAGLLYKGQAHFESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEA 595
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +I QP+ + ALL C+ H K+DL + ++E+EPH D +V LSN+YA
Sbjct: 596 MKLIGEIAYQPSVMVWRALLGACVIHKKVDLGRVCAQHVLEMEPHDDATHVLLSNMYATA 655
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
RWD +R+ M++ V+K PG S+VE G +H F D SHP + I ML ++ +
Sbjct: 656 GRWDNVAFVRKYMQKKKVRKEPGLSWVENQGVVHYFSVGDTSHPDIKLICAMLEWLNKKT 715
Query: 420 K 420
+
Sbjct: 716 R 716
Score = 117 bits (294), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 146/307 (47%), Gaps = 10/307 (3%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGY--ITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
P T F+ A + A+H I K G+E + FV +L+ + S D+ +
Sbjct: 97 PQTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSM-DLAHLC 155
Query: 66 KVFDGIPVK-----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K + +++D Y+ G++ +AR VFD + +D++SW+ ++ Y
Sbjct: 156 WTLHACVYKLGHHADAFVGTALIDAYSVRGNVDVARHVFDDICCKDMVSWTGMVACYAEN 215
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
Y+E+L +F +MR+ G KPN T+ L +C L A + G+ +H + L +
Sbjct: 216 CFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVG 275
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+++YAK G I +A +F M +D+ W+ MI +A KE+LDLF M
Sbjct: 276 IALLELYAKSGEIIDAQRLFEE--MPKTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTS 333
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
V P+ T+ ++L ACA + C+ K G+ ++DV A+ G++ +
Sbjct: 334 VVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVYAKCGEIENSM 393
Query: 301 QFLCQIP 307
+ ++P
Sbjct: 394 KLFEELP 400
Score = 114 bits (285), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 143/296 (48%), Gaps = 33/296 (11%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+G P++ T K+ L +G ++HG K Y+ D FV
Sbjct: 231 MGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFV---------------- 274
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
GI ++L+ YAK G+I A+++F+ MP+ D++ WS +I Y +
Sbjct: 275 ------GI---------ALLELYAKSGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSDRS 319
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EAL +F MR + PN T SVL ACA +LD G+ +H V+ L + + ++
Sbjct: 320 KEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAI 379
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+D+YAKCG I+ ++ +F L +DV WN++I G+ G + +++LF+ M ++P
Sbjct: 380 MDVYAKCGEIENSMKLFEE-LPDRNDV-TWNTIIVGYVQLGDGERAMNLFTHMLEHDMQP 437
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
E+TY ++L A A ++ K + ++D+ A+ G++ +A
Sbjct: 438 TEVTYSSVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDA 493
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 44/298 (14%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+L + N +L+ Y + + A ++FD MP+ + +S+ L GY R + +AL +
Sbjct: 69 DLFAQNILLNFYVQSNSLQDASKLFDEMPQTNTISFVTLAQGYSRDHQFHQALHFILRIF 128
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G + N ++L + +H V + T+L+D Y+ G +
Sbjct: 129 KEGHEVNPFVFTTLLKLLVSMDLAHLCWTLHACVYKLGHHADAFVGTALIDAYSVRGNVD 188
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
A HVF K D+ W M+ +A + +ESL LF++M I+G KP+ T L +
Sbjct: 189 VARHVFDDICCK--DMVSWTGMVACYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKS 246
Query: 255 C-----------------------------------AHGGLVKEAWYFFDCLGKNGMTPK 279
C A G + +A F+ + K + P
Sbjct: 247 CLGLEAFNVGKSVHGCALKGCYDHDLFVGIALLELYAKSGEIIDAQRLFEEMPKTDLIP- 305
Query: 280 SEHYACMVDVMARAGQVAEAYQFLC---QIPIQPTASMLGALLNGCMNHGKLDLAETV 334
++ M+ A++ + EA Q + P ++L C + LDL + +
Sbjct: 306 ---WSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQI 360
>IMGA|Medtr4g101330.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 21986774-21985146 H
EGN_Mt090430 20090702
Length = 542
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 143/395 (36%), Positives = 213/395 (53%), Gaps = 37/395 (9%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI----------------- 71
G IH + K G+++D V NSL++ YS + AR +FD I
Sbjct: 143 GTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARHLFDQIKDTSLVSWNIMISAYDL 202
Query: 72 --------------PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
P K +VSWN+++ Y + GD+ AR+VF MPE++ +SW+ +I G
Sbjct: 203 VNDYESADYLLELMPCKTVVSWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGC 262
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
V DY AL +F EM+ +G KP EVT++S+L ACA GAL+ G ++ + E +
Sbjct: 263 VSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIES 322
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
L +LV+MY KCG + A +F MK V WN+M+ G A HG +E LF+EM
Sbjct: 323 YLGNALVNMYCKCGNLSLAWEIFNG--MKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEME 380
Query: 238 IV---GVKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARA 293
++PD +T++ +L AC+H GLV +A WYF + + + P S+HY CMVD+++R
Sbjct: 381 ESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLSRW 440
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G + EAYQ + P Q + + LL C +LAE ++L +L+ DG YV LS
Sbjct: 441 GLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLS 500
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
N+YA RWD+ +R M+ + V + GYS + M
Sbjct: 501 NIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 535
>IMGA|Medtr3g143170.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 36874475-36872016 H
EGN_Mt090430 20090702
Length = 631
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 147/421 (34%), Positives = 227/421 (53%), Gaps = 7/421 (1%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D T L +CL + +HG T G+ ++ ++N+LI Y + ++
Sbjct: 191 GLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKCGEPNSS 250
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+F + K+ VSW SM+ Y + I A +VF+ MP + +SW+ LI G+V+ G
Sbjct: 251 FCLFRSMVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPVKYTVSWAALISGFVKNGRCY 310
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI---DNELPLTLVLRT 181
EAL VF +M G P T VSVL ACA + +G+ +H +I ++ + +
Sbjct: 311 EALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQIIRGRSSDNLFNVYVFN 370
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+L+DMYAKCG ++ A ++F ++ DV WN++I GFA +G ++SL +F M +
Sbjct: 371 ALMDMYAKCGDMKSAENLFEM-MIHVKDVVSWNTLITGFAQNGRGEDSLAVFDRMIESNI 429
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAY 300
+P+ +T+L +LSAC H GLV D + + G+ PKS HYA ++D++ R ++ EA
Sbjct: 430 EPNHVTFLGVLSACNHAGLVNAGLELLDSMERRYGVKPKSNHYALLIDLLGRKNRLEEAM 489
Query: 301 QFLCQIP--IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
+ ++P I +M GA+L GC HG L+LA L LEP GRYV LSN+YA
Sbjct: 490 CLIEKVPNEISNHIAMWGAVLGGCRVHGNLELARKAAEALFALEPENTGRYVMLSNIYAA 549
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
RW +R M+ G+KK P +S +E+ + H FVA DK HP +I +V
Sbjct: 550 SGRWSDTNRIRNVMKERGLKKEPAFSRIELKESRHEFVAKDKFHPQIGEIREANSKLVQH 609
Query: 419 M 419
M
Sbjct: 610 M 610
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 145/296 (48%), Gaps = 10/296 (3%)
Query: 15 FLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP 72
F + S C+ + L G A+H + K + F++N LI +YS + K FD +P
Sbjct: 65 FSSLISNCVSAKSLKHGKALHSQLIKTALFFETFLANGLIDLYSKCGCKESIHKAFDDLP 124
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
K +WN++L Y+K G + A ++FD MP+++++S++ LI G R + EA+ F E
Sbjct: 125 NKTTRTWNTLLSFYSKKGVFNQAYKLFDEMPQRNLVSYNSLISGLTRHEFHKEAVKFFRE 184
Query: 133 MR--VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M+ V G +E T+VS++ C+ L + R +H L+L +L+D Y KC
Sbjct: 185 MQNGVGGLMLDEFTLVSLVSNCSCLDTVKWLRQVHGVATIVGFRTNLILNNALIDAYGKC 244
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G + +FRS M D W SM+ + + ++ +F+EM + +++
Sbjct: 245 GEPNSSFCLFRS--MVEKDAVSWTSMVVTYTRASRIDDACKVFNEMPV----KYTVSWAA 298
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
L+S G EA F + K G+ P+++ + ++D A + Q CQI
Sbjct: 299 LISGFVKNGRCYEALEVFHQMIKEGVLPRAQTFVSVLDACASEALIGRGKQVHCQI 354
>IMGA|Medtr5g044270.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 18365050-18366920 E
EGN_Mt090430 20090702
Length = 585
Score = 259 bits (662), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 130/347 (37%), Positives = 212/347 (61%), Gaps = 3/347 (0%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N+ ++++ Y CGDI +R+VFD + E V++++ +I R +EALA+F E++
Sbjct: 145 NMYVVPTLINMYTACGDIDASRRVFDKIDEPCVVAYNAIIMSLARNNRANEALALFRELQ 204
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G KP +VTM+ VL +CA LG+LD GR MH YV + + T+L+DMYAKCG++
Sbjct: 205 EIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLD 264
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+A++VFR M D W+++I +A HG +++ + +EM V+PDEIT+L +L A
Sbjct: 265 DAVNVFRD--MPKRDTQAWSAIIVAYATHGDGFQAISMLNEMKKEKVQPDEITFLGILYA 322
Query: 255 CAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
C+H GLV+E + YF + G+ P +HY CMVD++ RAG++ EAY+F+ ++PI+PT
Sbjct: 323 CSHNGLVEEGFEYFHGMTNEYGIVPSIKHYGCMVDLLGRAGRLDEAYKFIDELPIKPTPI 382
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
+ LL+ C HG +++ + V ++ EL+ G YV SN+ A + +WD +R+ M
Sbjct: 383 LWRTLLSACSTHGNVEMGKRVIERIFELDDSHGGDYVIFSNLCARYGKWDDVNHLRKTMI 442
Query: 374 RMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
G K PG S +E++ +H F A + H +S ++ L +V ++K
Sbjct: 443 DKGAVKIPGCSSIEVNNVVHEFFAGEGVHSTSTTLHRALDELVKELK 489
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 110/232 (47%), Gaps = 19/232 (8%)
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A Q+FD + + +++ ++ + GY R D A+ +F VLC
Sbjct: 80 AHQLFDQITQPNIVLFNTMARGYARLNDPLRAMILFSH---------------VLCY-GL 123
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
+ AL +G+ +H + + + + + +L++MY CG I + VF + +P V +N
Sbjct: 124 VKALAEGKQLHCFAVKLGVSDNMYVVPTLINMYTACGDIDASRRVF-DKIDEPC-VVAYN 181
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
++I A + E+L LF E+ +G+KP ++T L +LS+CA G + + + + K
Sbjct: 182 AIIMSLARNNRANEALALFRELQEIGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKY 241
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
G + ++D+ A+ G + +A +P + T + A++ HG
Sbjct: 242 GFDRYVKVNTTLIDMYAKCGSLDDAVNVFRDMPKRDTQAW-SAIIVAYATHG 292
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/226 (23%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+G+ P +T + + A L +LG +H Y+ K G++ V+ +LI MY+ + +
Sbjct: 206 IGLKPTDVTMLVVLSSCALLGSLDLGRWMHEYVKKYGFDRYVKVNTTLIDMYAKCGSLDD 265
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
A VF +P ++ +W++++ YA G DG+
Sbjct: 266 AVNVFRDMPKRDTQAWSAIIVAYATHG------------------------DGF------ 295
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--T 181
+A+++ EM+ +P+E+T + +L AC+H G +++G H + NE + ++
Sbjct: 296 -QAISMLNEMKKEKVQPDEITFLGILYACSHNGLVEEGFEYFHG-MTNEYGIVPSIKHYG 353
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+VD+ + G + EA +KP+ + +W +++ + HG V+
Sbjct: 354 CMVDLLGRAGRLDEAYKFIDELPIKPTPI-LWRTLLSACSTHGNVE 398
>IMGA|Medtr8g112690.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 25422304-25420670 H
EGN_Mt090430 20090702
Length = 544
Score = 259 bits (661), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 142/395 (35%), Positives = 212/395 (53%), Gaps = 37/395 (9%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI----------------- 71
G IH + K G+++D V NSL++ YS + AR +FD I
Sbjct: 145 GTEIHCRVIKIGFQNDPSVQNSLLYFYSQCGLVSVARYLFDQIKDTSLVSWNIMISAYDR 204
Query: 72 --------------PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
P K ++SWN+++ Y + GD+ AR+VF MPE++ +SW+ +I G
Sbjct: 205 VDDYELADHLLELMPCKTVISWNTLIARYIRLGDVQAARRVFGCMPERNAVSWNSMIAGC 264
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
V DY AL +F EM+ +G KP EVT++S+L ACA GAL+ G ++ + E +
Sbjct: 265 VSVRDYAGALELFSEMQNAGVKPTEVTLISILGACAETGALEIGHKIYESLKVCEHKIES 324
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
L +LV+MY KCG + A +F MK V WN+M+ G A HG +E LF+EM
Sbjct: 325 YLGNALVNMYCKCGNLSLAWEIFNG--MKMKTVSCWNAMVIGLAVHGYCEEVFQLFTEME 382
Query: 238 IV---GVKPDEITYLNLLSACAHGGLVKEA-WYFFDCLGKNGMTPKSEHYACMVDVMARA 293
++PD +T++ +L AC+H GLV +A WYF + + + P S+HY CMVD++ R
Sbjct: 383 ESLGGSIRPDRVTFIGVLVACSHKGLVDKARWYFDHMVKRYKIVPDSKHYGCMVDLLTRR 442
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
G + EAYQ + P Q + + LL C +LAE ++L +L+ DG YV LS
Sbjct: 443 GLLEEAYQIIMTAPFQNSVVLWRTLLGACRTQSNTELAEISFKQLAKLKQLIDGDYVLLS 502
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
N+YA RWD+ +R M+ + V + GYS + M
Sbjct: 503 NIYAEAGRWDEVERLRSEMDYLHVPRQAGYSQINM 537
>IMGA|Medtr5g046330.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 19481798-19479312 H
EGN_Mt090430 20090702
Length = 828
Score = 258 bits (660), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 149/413 (36%), Positives = 230/413 (55%), Gaps = 35/413 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD + ASA + G IHG++ K G+ D FV NSL
Sbjct: 397 MVAKGIMPDSFSLASSISASASSGSIQFGQQIHGHVMKRGF-FDEFVQNSL--------- 446
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+D Y+KCG S A +F+ + + +++W+C+I G+ +
Sbjct: 447 ----------------------MDMYSKCGFASSAYTIFNKIKHKSIVAWNCMICGFSQN 484
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL++F+EM + + N+VT +S + AC++LG LDKG+ +HH +I L +
Sbjct: 485 GISVEALSLFDEMFKNRLEINKVTFLSAIQACSNLGYLDKGKWIHHKIIVTGNQNDLYID 544
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LVDMYAKCG +Q A VF S + K V W++MI HG + + LF +M +
Sbjct: 545 TALVDMYAKCGDLQTAQKVFDSIVEKS--VVSWSTMIAAHGIHGQINAATSLFHKMVLSN 602
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+KP+E+T++N+LSAC H G VKE ++F+ + G+ P EH+A +VD+++RAG + A
Sbjct: 603 IKPNEVTFMNILSACRHAGSVKEGKFYFNTMRDYYGIVPNVEHFASIVDLLSRAGDINGA 662
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y+ + I AS+ GALLNGC +G++D+ E + +L + G Y LSN+YA
Sbjct: 663 YEIIKSIRTPVAASIWGALLNGCRIYGRMDMIEYIAEELGGISTDDTGYYTLLSNIYAEG 722
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
W ++R +R ME MG+KK PGYS VE+ ++RF + D S ++I M L
Sbjct: 723 GNWYESRKVRSKMEGMGLKKVPGYSTVEIDRKIYRFGSGDTSEWQMKEICMFL 775
Score = 115 bits (288), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 125/252 (49%), Gaps = 33/252 (13%)
Query: 13 FPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP 72
+P + +A + + +G +HG I K+G+ DR + SL+ MY + +A+KVFD +
Sbjct: 105 YPSVIRAVTGVGELIVGRKLHGRILKSGFCEDRVIGTSLVGMYGELCFLRDAKKVFDEMC 164
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V++LV W+S++ SC YV G Y E L +F
Sbjct: 165 VRDLVLWSSII---------------------------SC----YVENGVYREGLEMFRS 193
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M G +P+ V ++SV AC +G L + +H YV+ + L SL+ MY++CG
Sbjct: 194 MICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYSQCGY 253
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ A +F + W SMI + + +E+LD+F +M V+P+++T +++L
Sbjct: 254 LCRAKRLFEC--IDDRSTSCWTSMISAYNQNECFEEALDVFIKMQDSEVEPNDVTMISVL 311
Query: 253 SACAHGGLVKEA 264
++CA G +KE
Sbjct: 312 NSCARLGRLKEG 323
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 124/245 (50%), Gaps = 34/245 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD + +A+A + L ++HGY+ + G D +SNSLI MYS
Sbjct: 194 MICEGIRPDSVMLLSVAEACGKIGCLRLAKSVHGYVMREGMVGDGSLSNSLIVMYS---- 249
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+CG + A+++F+ + ++ W+ +I Y +
Sbjct: 250 ---------------------------QCGYLCRAKRLFECIDDRSTSCWTSMISAYNQN 282
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LVL 179
++EAL VF +M+ S +PN+VTM+SVL +CA LG L +G+ +H +V+ N + +T L L
Sbjct: 283 ECFEEALDVFIKMQDSEVEPNDVTMISVLNSCARLGRLKEGKSVHCFVLRNAMGVTGLDL 342
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+L+D Y+ C + + S + ++ WN++I +A GL E++ F+ M
Sbjct: 343 GPALIDFYSACWKMSSCEKLLHS--IGNENIVSWNTLISFYAREGLNDEAMAFFACMVAK 400
Query: 240 GVKPD 244
G+ PD
Sbjct: 401 GIMPD 405
>IMGA|Medtr2g049690.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 13630976-13633400 E
EGN_Mt090430 20090702
Length = 438
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 128/343 (37%), Positives = 212/343 (61%), Gaps = 14/343 (4%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVR------------KGDYD-EALAVFEEMRVSGP 138
+ ++R +FD + E D+ +W+ +++ Y R D+ E+L +F +M+V G
Sbjct: 1 MCVSRYIFDRINEPDLATWNVILNAYARSSSYHSYSNSFDDADFSLESLYLFRDMQVIGI 60
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+PNEVT+V+++ AC++LGA+ +G +H +V+ N++ + + T+ VDMY+KCG + A
Sbjct: 61 RPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYSKCGCLNLACQ 120
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF D F + +MIGGFA HG ++L+L+ +M G+ PD T++ + AC+H
Sbjct: 121 VFDKMPENDRDSFCYTAMIGGFAVHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHV 180
Query: 259 GLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
GLV+E F + + +G+ PK EHY C++D++ RAG++ EA ++L +P++P A + +
Sbjct: 181 GLVEEGLEIFKSMKEVHGVEPKLEHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAVLWRS 240
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
LL HG L + E KLIELEP G YV LSN+YA R + + +R+ M+ GV
Sbjct: 241 LLGAARIHGNLGVGEVALTKLIELEPETSGNYVLLSNMYASVGRVNDVKRVRKLMKHHGV 300
Query: 378 KKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
K PG+S VE+ GA+H F+ D+SHP S++IY+ + I S+++
Sbjct: 301 NKLPGFSLVEIKGAMHEFLTGDRSHPFSKEIYLKIAEINSRLE 343
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ P+ +T L A + L G +H ++ + + +RFV + + MYS
Sbjct: 55 MQVIGIRPNEVTIVALISACSNLGAVSQGFWVHCFVLRNKIKMNRFVGTAFVDMYS---- 110
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE--QDVLSWSCLIDGYV 118
KCG +++A QVFD MPE +D ++ +I G+
Sbjct: 111 ---------------------------KCGCLNLACQVFDKMPENDRDSFCYTAMIGGFA 143
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTL 177
G ++AL ++ +M+ G P+ T V + AC+H+G +++G + + + + + L
Sbjct: 144 VHGYGNQALELYRKMKFKGLVPDSATFVVTMFACSHVGLVEEGLEIFKSMKEVHGVEPKL 203
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
L+D+ + G ++EA MKP+ V +W S++G HG
Sbjct: 204 EHYGCLIDLLGRAGRLKEAEEWLADMPMKPNAV-LWRSLLGAARIHG 249
>IMGA|Medtr1g008670.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 864370-866376 H
EGN_Mt090430 20090702
Length = 668
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 147/443 (33%), Positives = 244/443 (55%), Gaps = 36/443 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R G+ P+ L K L G IHG K G++ + FV +SL+ MY
Sbjct: 186 MVRDGLRPNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMY----- 240
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+CG++ +R VFD + ++ +SW+ LI G+ RK
Sbjct: 241 --------------------------ARCGELRESRLVFDELESKNEVSWNALISGFARK 274
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ +EAL +F +M+ G E T ++LC+ + G+L++G+ +H +++ + L +
Sbjct: 275 GEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAHMMKSGKKLVGYVG 334
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-V 239
+L+ MYAK G I +A VF + DV NSM+ G+A HGL KE+++LF EM + V
Sbjct: 335 NTLLHMYAKSGNICDAKKVFDR--LVKVDVVSCNSMLIGYAQHGLGKEAVELFEEMMLWV 392
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
++P++IT+L++L+AC+H GL+ E Y+F+ + K G+ PK HY +VD+ RAG + +A
Sbjct: 393 EIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVDLFGRAGLLDQA 452
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
F+ ++PI+P A++ GALL H ++ +K++EL+P G + LSN+YA
Sbjct: 453 KSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLELDPFYPGAHTLLSNIYASA 512
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+W +R+ M+ G+KK P S+VE+ ++H F A+D SHP ++Y M + ++
Sbjct: 513 GQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDISHPQKNKVYEMWENLNQKI 572
Query: 420 KHI--VDYENQEYYFYDNEGKLL 440
K I V + + F D + K L
Sbjct: 573 KEIGYVPDTSHVHVFVDQQEKEL 595
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 100/205 (48%), Gaps = 6/205 (2%)
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L V + + +P+ +L C LG L +G+++H ++++++ LV++ S++
Sbjct: 75 GLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILF 134
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE---SLDLFSEMHIVGVK 242
MYAKCG+++ A VF +K DV W SMI G++ G +L LF EM G++
Sbjct: 135 MYAKCGSLEIARQVFDEMCVK--DVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLR 192
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
P+E +L+ C G + C K G + +VD+ AR G++ E+
Sbjct: 193 PNEFALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLV 252
Query: 303 LCQIPIQPTASMLGALLNGCMNHGK 327
++ + S AL++G G+
Sbjct: 253 FDELESKNEVSW-NALISGFARKGE 276
>IMGA|Medtr4g108510.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 24054835-24053083 E
EGN_Mt090430 20090702
Length = 449
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 228/398 (57%), Gaps = 17/398 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ TFP L K+S+ + L H K G SD FV +L+ +Y+
Sbjct: 58 MLANNVSPNTHTFPPLLKSSSAFVVTPL----HCQALKRGILSDPFVLTTLLVVYARTNH 113
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A+KVF+ +P+ +V+ N+M++ + G++ A VF+ MP +DV+SW+ +++G+
Sbjct: 114 IVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYRDVVSWTTMVNGFALS 173
Query: 121 GDYDEALAVFEEMRVSGP------KPNEVTMVSVLCACAHL---GALDKGRMMHHYVIDN 171
G++ A+ F M KPNE T VSVL +C L GALD GR +H Y++
Sbjct: 174 GNFGAAIRFFGTMMRHKDVLDCLVKPNEATYVSVLSSCTELEGKGALDFGRQVHGYIVVK 233
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ L + + TSL+++Y K G + + VFR +M +V WN+MI A +G KE+LD
Sbjct: 234 GVDLGVFVGTSLINLYGKMGCLNYSASVFR--VMVVREVCTWNAMISSLASNGREKEALD 291
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVM 290
LF +M + G+KP+ IT++ +L+ACA GG V E F+ + K + P EHY C+VD++
Sbjct: 292 LFEKMKLQGLKPNSITFVAVLTACARGGFVSEGLELFESMSSKFQVVPVMEHYGCVVDLL 351
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV 350
RAG + EA + + +P P ++LGA L C HG ++L E + K+++L+ G+Y+
Sbjct: 352 GRAGHIQEAAEIIRNMPFPPDKTVLGAFLGACRIHGAIELGEEIA-KMLKLQTQHCGQYL 410
Query: 351 GLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
LS++YA RW+ A +R + G+ K P +S V +
Sbjct: 411 LLSSMYAEKERWNHAADLRNEIMEAGIHKIPAFSMVHL 448
>IMGA|Medtr3g162760.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 42573710-42572010 E
EGN_Mt090430 20090702
Length = 566
Score = 256 bits (654), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 146/416 (35%), Positives = 224/416 (53%), Gaps = 36/416 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T+ F K+ L + +HG+I K G+ D ++ N+LIHMYS ++ AR+V
Sbjct: 89 PDTFTYSFALKSCGRLKLTQQAKQLHGFINKMGFGFDLYIQNALIHMYSEIGELVIARQV 148
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + +++VSW SM I G+V EA+
Sbjct: 149 FDRMSHRDVVSWTSM-------------------------------IAGFVNHHLTVEAI 177
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F+ M G NE T++SVL CA GAL GR +H V + + + T+L+ MY
Sbjct: 178 QLFQRMLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMY 237
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+KCG ++ A VF L + DVF+W +MI G ACHG+ KE+++LF EM VKPDE T
Sbjct: 238 SKCGCLESAREVFDDVLDR--DVFVWTAMIYGLACHGMCKEAIELFLEMETCNVKPDERT 295
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+ +LSA + GLV+E + FF+ + K M P +H+ CMVD++A+ G + EA F+ +
Sbjct: 296 IMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKHFGCMVDLLAKGGCLEEAEDFINAM 355
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGR--KLIELEPHQDGRYVGLSNVYAIFRRWDK 364
P++P A + L+ C H + AE + + +L + H G Y+ SNVYA +W
Sbjct: 356 PMKPDAVIWRTLIWACKVHADTERAERLMKHLELQGMSAHDSGSYILASNVYASTGKWCD 415
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+RE M + G+ K PG S +E+ G +H FV D HP +E+I++ L +V +++
Sbjct: 416 KAEVRELMNKKGLVKPPGSSRIEVDGVVHEFVMGDYDHPDTEKIFIKLDQMVDKLR 471
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 102/242 (42%), Gaps = 33/242 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML VGV + T + + A +G +HG + + G + V +LIHMYS
Sbjct: 183 MLEVGVDVNEATVISVLRGCADSGALSVGRKVHGIVKEKGIDFKANVCTALIHMYSKCGC 242
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +AR+VFD + + R VF W+ +I G
Sbjct: 243 LESAREVFDDV----------------------LDRDVF---------VWTAMIYGLACH 271
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVL 179
G EA+ +F EM KP+E T++ VL A + G + +G M + V + +
Sbjct: 272 GMCKEAIELFLEMETCNVKPDERTIMVVLSAYRNAGLVREGYMFFNDVQKRYSMKPNIKH 331
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+VD+ AK G ++EA + MKP D IW ++I H + + L + +
Sbjct: 332 FGCMVDLLAKGGCLEEAEDFINAMPMKP-DAVIWRTLIWACKVHADTERAERLMKHLELQ 390
Query: 240 GV 241
G+
Sbjct: 391 GM 392
>IMGA|Medtr3g104680.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 26094488-26092638 H
EGN_Mt090430 20090702
Length = 616
Score = 253 bits (647), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 144/424 (33%), Positives = 235/424 (55%), Gaps = 6/424 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACL--LKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
+L G+ PDH F L KA A L + +LG +H + + D V +SL+ MY+ F
Sbjct: 100 ILHEGLQPDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKF 159
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
R VFD I + +SW +M+ GYA+ G A ++F P +++ +W+ LI G V
Sbjct: 160 ELPDYGRAVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFKNLYAWTALISGLV 219
Query: 119 RKGDYDEALAVFEEMRVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ G+ ++AL +F EMR G + + + SV+ ACA+ + G+ +H VI L
Sbjct: 220 QSGNANDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCL 279
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ +LVDMYAKC + A ++F M+ DV W S+I G A HGL +E+L L+ +M
Sbjct: 280 FISNALVDMYAKCSDVVAAKYIFCE--MRRKDVVSWTSIIVGTAQHGLAEEALTLYDDMV 337
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQV 296
+ GVKP+E+T++ L+ AC+H GLV + F + ++ G+ P +HY C++D+ +R+G +
Sbjct: 338 LAGVKPNEVTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPSLQHYTCLLDLFSRSGHL 397
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
EA + +P++P ALL+ C +HG +A + L++L+P Y+ LSN+Y
Sbjct: 398 DEAENLIRTMPVKPDEPTWAALLSACKHHGNTKMAVRIADHLLDLKPEDPSSYILLSNIY 457
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIV 416
A W+ +R+ M VKK PGYS V++ F A + S P ++I ++ +
Sbjct: 458 AGAGMWENVSMVRKLMAVKEVKKVPGYSCVDLGREFQVFHAGEASQPMKDEILGLMTKLD 517
Query: 417 SQMK 420
S+M+
Sbjct: 518 SEMR 521
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 151/341 (44%), Gaps = 47/341 (13%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+++D Y KCG + A ++FD +P+QD ++W+ ++ +A ++ + G +
Sbjct: 47 KTLIDAYGKCGLLKDALKLFDALPQQDHVAWATVLSACNLSNLPHKAFSISLPILHEGLQ 106
Query: 140 PNEVTMVSVLCACAHLGA--LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK-------- 189
P+ S++ ACA+LG+ + G+ +H + + V+++SLVDMYAK
Sbjct: 107 PDHFVFSSLIKACANLGSVHVKLGKQLHARFLLSPFFEDDVVKSSLVDMYAKFELPDYGR 166
Query: 190 -----------------------CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
G EAL +FR K +++ W ++I G G
Sbjct: 167 AVFDSIFELSSISWTAMISGYARSGRKLEALELFRESPFK--NLYAWTALISGLVQSGNA 224
Query: 227 KESLDLFSEMHIVGVK-PDEITYLNLLSACAHGG---LVKEAWYFFDCLGKNGMTPKSEH 282
++L LF EM GV D + +++ ACA+ L K+ LG S
Sbjct: 225 NDALYLFVEMRREGVSIADPLVLSSVVGACANSAVRELGKQVHCVVITLGYESCLFISN- 283
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI--E 340
+VD+ A+ V A C++ + S +++ G HG + A T+ ++
Sbjct: 284 --ALVDMYAKCSDVVAAKYIFCEMRRKDVVSW-TSIIVGTAQHGLAEEALTLYDDMVLAG 340
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAM-ERMGVKKS 380
++P++ +VGL + K R++ ++M E G++ S
Sbjct: 341 VKPNE-VTFVGLIYACSHVGLVSKGRALFKSMVEDFGIRPS 380
>IMGA|Medtr7g110740.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 25845845-25844055 H
EGN_Mt090430 20090702
Length = 596
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 149/422 (35%), Positives = 225/422 (53%), Gaps = 36/422 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR GV PD FP K+ L + +H + K Y D FV +S+I MY
Sbjct: 112 MLRQGVPPDDHIFPSATKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMY----- 166
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKCGDI A VFD MP ++V+SWS LI GYV+
Sbjct: 167 --------------------------AKCGDICYAHNVFDEMPYRNVVSWSGLIYGYVQL 200
Query: 121 GDYDEALAVFEEMRVSGPKP--NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G+ DE+L +F+ V N+ T+ SVL C L GR++H +
Sbjct: 201 GEDDESLRLFKRFLVEEENEGVNDFTLSSVLRVCGGSTLLQMGRLIHGLSFKTSFDSSCF 260
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +SL+ +Y+KCG ++EA VF ++ ++ +WN+M+ A H ++ +LF +M
Sbjct: 261 VASSLISLYSKCGVVEEAYDVFEEVTVR--NLGMWNAMLIACAQHAHTDKTFELFDKMKS 318
Query: 239 VG-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
VG +K + IT+L +L AC+H GLV++ Y+F+ + G+ P ++HY+ MVD++ RAG++
Sbjct: 319 VGGMKANFITFLCVLYACSHAGLVEKGKYYFELMKDYGIEPGTQHYSTMVDLLGRAGKLN 378
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
+A + + ++P++PT S+ GALL GC HG LA V ++ EL G +V LSN YA
Sbjct: 379 DAVKLIEEMPMEPTESVWGALLTGCRLHGNTKLASYVADRVSELGSVSSGLHVMLSNAYA 438
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
RW++A R+ M G+KK G S+VE +H F A D+SH S +IY L +
Sbjct: 439 AAGRWEEAAKARKMMRDRGIKKETGLSWVEEGNRIHTFAAGDRSHAKSVEIYDKLDELGE 498
Query: 418 QM 419
+M
Sbjct: 499 EM 500
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 126/305 (41%), Gaps = 40/305 (13%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
GL +H +I K G ++ +S+ LI+ YS K + ++S+
Sbjct: 39 GLQLHAHIIKLGLQTIPLLSHHLINFYS-----------------KTHLPYSSL------ 75
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
Q+F P + +WS +I + + +L F M G P++ S
Sbjct: 76 --------QIFHDSPHKSATTWSSVISSFAQNDLPLLSLNYFRLMLRQGVPPDDHIFPSA 127
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+C L +L +M+H + + L + + +S++DMYAKCG I A +VF M
Sbjct: 128 TKSCGILSSLPVAKMLHCFALKTAYHLDIFVGSSVIDMYAKCGDICYAHNVFDE--MPYR 185
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFS----EMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+V W+ +I G+ G ESL LF E GV ++ T ++L C L++
Sbjct: 186 NVVSWSGLIYGYVQLGEDDESLRLFKRFLVEEENEGV--NDFTLSSVLRVCGGSTLLQMG 243
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
K + ++ + ++ G V EAY ++ ++ M A+L C
Sbjct: 244 RLIHGLSFKTSFDSSCFVASSLISLYSKCGVVEEAYDVFEEVTVR-NLGMWNAMLIACAQ 302
Query: 325 HGKLD 329
H D
Sbjct: 303 HAHTD 307
>IMGA|Medtr7g133330.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 31160612-31158878 E
EGN_Mt090430 20090702
Length = 512
Score = 253 bits (646), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 146/419 (34%), Positives = 219/419 (52%), Gaps = 35/419 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYS---- 56
M R GV P+ T L +A L +H G+ + FV +SLI Y+
Sbjct: 97 MGRAGVVPNDYTISTLLRAVISTELDVLVRQVHALAFHLGHYLNVFVGSSLIRAYAGLKE 156
Query: 57 ------SFRDIP---------------------NARKVFDGIPVKNLVSWNSMLDGYAKC 89
+F DI +A+ FD +P +N++SW ++++GY K
Sbjct: 157 EEALGRAFNDISMKDVTSWNALVSSYMELGKFVDAQTAFDQMPQRNIISWTTLVNGYVKN 216
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
++ AR VFD M E++V+SW+ +I GYV+ + +AL +F M + +PN T SVL
Sbjct: 217 KQVNKARSVFDDMSERNVVSWTAMISGYVQNKRFVDALKLFVLMFKTETRPNHFTFSSVL 276
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
ACA +L G +H +I + + ++ TSLVDMYAKCG + A VF S ++ +
Sbjct: 277 DACAGSSSLIMGLQLHPCIIKSGIANDVIWLTSLVDMYAKCGDMDAAFGVFES--IRDKN 334
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW-YFF 268
+ WN++IGG+A HGL +L+ F M +VG PDE+T++N+LSAC H GLV+E +F
Sbjct: 335 LVSWNAIIGGYASHGLATRALEEFDRMKVVGT-PDEVTFVNVLSACVHAGLVEEGEKHFT 393
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
D L K G+ + EHY+CMVD+ RAG+ EA + +P +P + GALL C H L
Sbjct: 394 DMLTKYGIQAEMEHYSCMVDLYGRAGRFDEAENLIKNMPFEPDVVLWGALLAACGLHSNL 453
Query: 329 DLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
+L E ++ LE Y LS + W +R+ M+ G+KK S+VE
Sbjct: 454 ELGEYAAERIRRLESSHPVSYSVLSKIQGEKGVWSSVNELRDTMKERGIKKQTAISWVE 512
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/341 (20%), Positives = 134/341 (39%), Gaps = 66/341 (19%)
Query: 49 NSLIHMYSSFRDIPNARKVFD-GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV 107
N +I+ Y ++ A K+ D + N+VSWN ++ Y + I +FD MP +D
Sbjct: 12 NYMINTYIDNNNVKQAHKLLDENLLSCNIVSWNMVMTAYLQHNQIGPVHDLFDKMPLKDA 71
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC-----------AHLG 156
+SW+ ++ G+ R + + F +M +G PN+ T+ ++L A H
Sbjct: 72 VSWNIMLSGFQRTRNSEGLYRCFLQMGRAGVVPNDYTISTLLRAVISTELDVLVRQVHAL 131
Query: 157 ALDKGRMMHHYVID-------------------NELPLTLVLR-TSLVDMYAKCGAIQEA 196
A G ++ +V N++ + V +LV Y + G +A
Sbjct: 132 AFHLGHYLNVFVGSSLIRAYAGLKEEEALGRAFNDISMKDVTSWNALVSSYMELGKFVDA 191
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF---SEMHIVG------------- 240
F M ++ W +++ G+ + V ++ +F SE ++V
Sbjct: 192 QTAFDQ--MPQRNIISWTTLVNGYVKNKQVNKARSVFDDMSERNVVSWTAMISGYVQNKR 249
Query: 241 ---------------VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
+P+ T+ ++L ACA + C+ K+G+
Sbjct: 250 FVDALKLFVLMFKTETRPNHFTFSSVLDACAGSSSLIMGLQLHPCIIKSGIANDVIWLTS 309
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+VD+ A+ G + A+ I + S A++ G +HG
Sbjct: 310 LVDMYAKCGDMDAAFGVFESIRDKNLVS-WNAIIGGYASHG 349
>IMGA|Medtr8g145930.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 35550598-35547359 E
EGN_Mt090430 20090702
Length = 734
Score = 253 bits (645), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 127/341 (37%), Positives = 202/341 (59%), Gaps = 3/341 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++++D YAKCG ++ AR+ F+ + + DV+ W+ +I GYV+ GDY+ L ++ +M++
Sbjct: 359 SAVVDMYAKCGSLADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVI 418
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PNE+TM SVL AC+ L ALD+G+ MH +I L + + ++L MY KCG++ + +
Sbjct: 419 PNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLI 478
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M DV WN+MI G + +G ++L+LF +M + G+KPD +T++NLLSAC+H G
Sbjct: 479 FWR--MPSRDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMG 536
Query: 260 LVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
LV W +F + + + P EHYACMVD+++RAG++ EA +F+ + + L
Sbjct: 537 LVDRGWEYFKMMFDEFNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRIL 596
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L C NH +L G KL+EL + YV LS++Y + +R M+ GV
Sbjct: 597 LGACKNHRNYELGVYAGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVN 656
Query: 379 KSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
K PG S++E+ G +H FV D HP ++I + L + M
Sbjct: 657 KEPGCSWIELKGLVHVFVVGDNQHPQVDEIRLELELLTKLM 697
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 141/262 (53%), Gaps = 10/262 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ YAKCG + A + F+ +++ ++WS ++ GY + GD D+AL +F +M SG
Sbjct: 258 NALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDKALKLFNKMHSSGVL 317
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+E T+V V+ AC+ L A+ +G+ MH + L L + +++VDMYAKCG++ +A
Sbjct: 318 PSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKG 377
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F ++ DV +W S+I G+ +G + L+L+ +M + V P+E+T ++L AC+
Sbjct: 378 FEC--VQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRACSSLA 435
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+ + + K G + + + + + G + + Y ++P + S A++
Sbjct: 436 ALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISW-NAMI 494
Query: 320 NGCMNHGKLDLAETVGRKLIEL 341
+G +G G K +EL
Sbjct: 495 SGLSQNGH-------GNKALEL 509
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 131/248 (52%), Gaps = 5/248 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+S+L+ Y K G + AR++FD MPE++ +SW+ +I GY D+A+ VFE MR
Sbjct: 157 SSLLNMYCKTGFVFDARKLFDRMPERNTVSWATMISGYASSDIADKAVEVFELMRREEEI 216
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
NE + SVL A + GR +H I N L + + +LV MYAKCG++ +A+
Sbjct: 217 QNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRT 276
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F K S W++M+ G+A G ++L LF++MH GV P E T + +++AC+
Sbjct: 277 FEFSGDKNS--ITWSAMVTGYAQGGDSDKALKLFNKMHSSGVLPSEFTLVGVINACSDLC 334
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ-FLCQIPIQPTASMLGAL 318
V E K G + + +VD+ A+ G +A+A + F C QP + ++
Sbjct: 335 AVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSLADARKGFEC--VQQPDVVLWTSI 392
Query: 319 LNGCMNHG 326
+ G + +G
Sbjct: 393 ITGYVQNG 400
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/251 (23%), Positives = 116/251 (46%), Gaps = 37/251 (14%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ LT + +A + L + G +H I K G++ + + ++L MY+ + +
Sbjct: 417 VIPNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGY 476
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+F +P ++++SWN+M+ G ++ G ++
Sbjct: 477 LIFWRMPSRDVISWNAMISGLSQ-------------------------------NGHGNK 505
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSL 183
AL +FE+M + G KP+ VT V++L AC+H+G +D+G + D E + ++ +
Sbjct: 506 ALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFD-EFNIAPMVEHYACM 564
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD+ ++ G + EA S + + +W ++G AC L +++ +V +
Sbjct: 565 VDILSRAGKLNEAKEFIESATVDHG-LCLWRILLG--ACKNHRNYELGVYAGEKLVELGS 621
Query: 244 DEITYLNLLSA 254
E + LLS+
Sbjct: 622 PESSAYVLLSS 632
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 103/228 (45%), Gaps = 8/228 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLM--PEQDVLSWSCLIDGYVRKGDYDE---ALAVFEE-M 133
N+ L+ YAK +S A +FD + ++D +SW+ LI+ + + A+++F M
Sbjct: 50 NTFLNLYAKTNHLSHALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMM 109
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
R + PN T+ V A ++L + G+ H + + + +SL++MY K G +
Sbjct: 110 RANNVIPNAHTLAGVFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFV 169
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+A +F M + W +MI G+A + +++++F M +E ++LS
Sbjct: 170 FDARKLFDR--MPERNTVSWATMISGYASSDIADKAVEVFELMRREEEIQNEFALTSVLS 227
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
A V KNG+ +V + A+ G + +A +
Sbjct: 228 ALTSDVFVYTGRQVHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVR 275
>IMGA|Medtr3g125360.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 32131508-32129641 E
EGN_Mt090430 20090702
Length = 546
Score = 251 bits (641), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 140/377 (37%), Positives = 210/377 (55%), Gaps = 38/377 (10%)
Query: 45 RFVSNSLIHMYSSFRDIPNARKVFDGIP--VKNLVSWNSMLDGYAKCGDISMARQVFDLM 102
R + +I ++ D ARK FD +P +K++V W M+DGYAK G++ AR+VF+LM
Sbjct: 148 RVSWSQMIGGFARNGDTLTARKFFDKVPYELKDVVIWTVMVDGYAKKGEMEDAREVFELM 207
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFE------------------------------- 131
PE++ WS ++ GY +KGD EA A+F
Sbjct: 208 PERNYFVWSSMVCGYCKKGDVMEAEAIFRRIPVRNLEIWNSMIAGYVQNGCGEKALEAFG 267
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM V G +P+E T+VSVL ACA LG LD G+ MHH + + + + + L+DMYAKCG
Sbjct: 268 EMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFVLSGLIDMYAKCG 327
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A VF S +VF WN+MI GFA +G E L+ M ++ D +T++ +
Sbjct: 328 DLVNARLVFES--CNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLDAVTFITV 385
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
LSACAHGGL+ EA + + G+ HY CMVD++ RAG++ EAY+ + ++P++P
Sbjct: 386 LSACAHGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGKLKEAYELIKRMPMKPN 445
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQ--DGRYVGLSNVYAIFRRWDKARSMR 369
++LGA++ C H + +AE V K+I + + V LSN+YA +W+KA +R
Sbjct: 446 ETVLGAMIGACWIHSDMKMAEQV-MKMIGADSAACVNSHNVLLSNIYAASEKWEKAEMIR 504
Query: 370 EAMERMGVKKSPGYSFV 386
+M G +K PGYS +
Sbjct: 505 SSMVDGGSEKIPGYSSI 521
Score = 128 bits (321), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 143/273 (52%), Gaps = 16/273 (5%)
Query: 31 AIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG 90
++H KAG + D F+ +++ Y+ + +ARKVFD +P +N+V+WN+M+ GY + G
Sbjct: 72 SLHAESIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVFDLMPERNVVTWNAMIGGYLRNG 131
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
D A F+ MP + +SWS +I G+ R GD A F+++ P E+ V +
Sbjct: 132 DAKSALLAFEEMPGKTRVSWSQMIGGFARNGDTLTARKFFDKV------PYELKDVVIWT 185
Query: 151 ACAHLGALDKGRMMHHYVIDNELP-LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
G KG M + +P + +S+V Y K G + EA +FR + +
Sbjct: 186 VMVD-GYAKKGEMEDAREVFELMPERNYFVWSSMVCGYCKKGDVMEAEAIFRR--IPVRN 242
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV---KEAWY 266
+ IWNSMI G+ +G +++L+ F EM + G +PDE T +++LSACA G + K+ +
Sbjct: 243 LEIWNSMIAGYVQNGCGEKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHH 302
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+C G+ + ++D+ A+ G + A
Sbjct: 303 MIEC---KGIAVNQFVLSGLIDMYAKCGDLVNA 332
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 102/206 (49%), Gaps = 7/206 (3%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF-----DGIPVKNLVSWNS 81
E L G + G+E D F S++ + D+ +++ GI V V +
Sbjct: 260 EKALEAFGEMGVDGFEPDEFTVVSVLSACAQLGDLDAGKQMHHMIECKGIAVNQFV-LSG 318
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++D YAKCGD+ AR VF+ E++V W+ +I G+ G +E L + M+ S + +
Sbjct: 319 LIDMYAKCGDLVNARLVFESCNERNVFCWNAMIAGFAVNGQCNEVLEYLDRMQESNIRLD 378
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
VT ++VL ACAH G + + + + + + + + +VD+ + G ++EA + +
Sbjct: 379 AVTFITVLSACAHGGLMSEALEVISKMEEYGIEMGIRHYGCMVDLLGRAGKLKEAYELIK 438
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVK 227
MKP++ + +MIG H +K
Sbjct: 439 RMPMKPNETVL-GAMIGACWIHSDMK 463
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 101/231 (43%), Gaps = 11/231 (4%)
Query: 109 SWSCLI-DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
+WS I + + AL ++++ R + + +L AC L + +H
Sbjct: 18 NWSHSIRNNSTNQASLKRALVLYKQTR-HDTTHDPTVIPQLLKACDSHPFLPYVKSLHAE 76
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
I + + + T++V YAKCG + +A VF LM +V WN+MIGG+ +G K
Sbjct: 77 SIKAGSDVDVFIGTAIVAAYAKCGVVCDARKVF--DLMPERNVVTWNAMIGGYLRNGDAK 134
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+L F EM +++ ++ A G A FFD + + MV
Sbjct: 135 SALLAFEEMP----GKTRVSWSQMIGGFARNGDTLTARKFFDKVPYE--LKDVVIWTVMV 188
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
D A+ G++ +A + +P + + +++ G G + AE + R++
Sbjct: 189 DGYAKKGEMEDAREVFELMP-ERNYFVWSSMVCGYCKKGDVMEAEAIFRRI 238
>IMGA|Medtr1g083640.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 16552935-16548751 H
EGN_Mt090430 20090702
Length = 1121
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 133/357 (37%), Positives = 205/357 (57%), Gaps = 4/357 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++++ Y + + AR VF+ + +D++SW+ +I V G EAL +F + + +
Sbjct: 491 NAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCVHNGLAIEALELFNSLIETNIE 550
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ +T+VSVL A A L +L KG+ +H ++I L ++ SLVDMYA+CG ++ A ++
Sbjct: 551 PDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGTMENARNI 610
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F +K D+ +W SMI HG K+++DLFS+M V PD IT+L LL AC+H G
Sbjct: 611 F--NYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVLPDHITFLALLYACSHSG 668
Query: 260 LVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
LV E F+ + + P EHYAC+VD++AR+ + EAY F+ +PI+P+A + AL
Sbjct: 669 LVVEGKQHFEIMKNEYKLEPWPEHYACLVDLLARSNSLEEAYHFVRNMPIEPSAEVWCAL 728
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L C H DL E +KL++L G YV +SN +A RW+ +R M+ +K
Sbjct: 729 LGACRIHSNNDLGEVAAKKLLQLNTENSGNYVLVSNTFAADGRWNDVEEVRSIMKGNKLK 788
Query: 379 KSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQ-EYYFYD 434
K PG S++E+ +H F+A DKSHP IY+ L +K Y Q + F+D
Sbjct: 789 KKPGCSWIEVENKIHTFMARDKSHPQCNNIYLKLAQFTKLLKEKGGYRAQTKLVFHD 845
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/256 (32%), Positives = 129/256 (50%), Gaps = 35/256 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +GV D TFP + KA +R LG IHG K GY FV N+LI MY
Sbjct: 139 MRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMY----- 193
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFD--LMPEQDVLSWSCLIDGYV 118
AKCGD+ AR +FD LM + D +SW+ +I +V
Sbjct: 194 --------------------------AKCGDLGGARVLFDSGLMEKDDPVSWNSIISAHV 227
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+G+ EAL++F M+ G + N T VS L AC + GR +H ++ + +
Sbjct: 228 GEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVY 287
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +L+ MYA CG +++A VF+S L K D WN+++ G + + ++++ F +M
Sbjct: 288 VSNALIAMYANCGQMEDAERVFKSMLFK--DCVSWNTLLSGMVQNDMYSDAINHFQDMQD 345
Query: 239 VGVKPDEITYLNLLSA 254
G KPD+++ LN+++A
Sbjct: 346 SGQKPDQVSVLNMIAA 361
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 105/220 (47%), Gaps = 12/220 (5%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y KCG A +VFD M E+ + +W+ +I V G Y EA+ +++EMRV G + T
Sbjct: 92 YGKCGSFYDAVKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTF 151
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VL AC G +H + + + +L+ MYAKCG + A +F SGLM
Sbjct: 152 PCVLKACGAFKERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLM 211
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ D WNS+I G E+L LF M VGV+ + T+++ L AC +K
Sbjct: 212 EKDDPVSWNSIISAHVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIG- 270
Query: 266 YFFDCLGKNGMTPKSEHYA------CMVDVMARAGQVAEA 299
G + + KS H+ ++ + A GQ+ +A
Sbjct: 271 -----RGIHAVILKSNHFTDVYVSNALIAMYANCGQMEDA 305
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 177/402 (44%), Gaps = 82/402 (20%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSS- 57
M VGV + T+ F++ AC ++G IH I K+ + +D +VSN+LI MY++
Sbjct: 242 MQEVGVESN--TYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIAMYANC 299
Query: 58 ----------------------------------------FRDIPNARKVFDGIPVKNLV 77
F+D+ ++ + D + V N++
Sbjct: 300 GQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDMQDSGQKPDQVSVLNMI 359
Query: 78 SW-----------------------------NSMLDGYAKCGDISMARQVFDLMPEQDVL 108
+ NS++D Y KC + F+ MPE+D++
Sbjct: 360 AASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAFEYMPEKDLI 419
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ +I GY + + +AL + ++++ + + + S+L AC+ L + + +H YV
Sbjct: 420 SWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEKLIKEIHGYV 479
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ L ++++ ++V++Y + + A HVF S + D+ W SMI +GL E
Sbjct: 480 LKGGLA-DILIQNAIVNVYGELALVDYARHVFES--INSKDIVSWTSMITCCVHNGLAIE 536
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+L+LF+ + ++PD IT +++L A A +K+ L + G + +VD
Sbjct: 537 ALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVD 596
Query: 289 VMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGK 327
+ AR G + A + ++ Q + SM+ A NG GK
Sbjct: 597 MYARCGTMENARNIFNYVKQRDLILWTSMINA--NGMHGCGK 636
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 107/226 (47%), Gaps = 35/226 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++ + PD +T + A+A L + G IHG++ + G+ + ++NSL+ MY+
Sbjct: 544 LIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGFLIRKGFFLEGLIANSLVDMYARCGT 603
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ NAR +F+ + ++L+ W SM++ G A +F M +++VL
Sbjct: 604 MENARNIFNYVKQRDLILWTSMINANGMHGCGKDAIDLFSKMTDENVL------------ 651
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
P+ +T +++L AC+H G + +G+ H ++ NE L
Sbjct: 652 -------------------PDHITFLALLYACSHSGLVVEGK-QHFEIMKNEYKLEPWPE 691
Query: 181 --TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
LVD+ A+ +++EA H R+ ++PS +W +++G H
Sbjct: 692 HYACLVDLLARSNSLEEAYHFVRNMPIEPS-AEVWCALLGACRIHS 736
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Query: 152 CAHLGALDKGRMMH-HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
CA AL +G+ +H H++ ++ L T V MY KCG+ +A+ VF M +
Sbjct: 56 CASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDK--MSERTI 113
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
F WN+MIG G E+++L+ EM ++GV D T+ +L AC
Sbjct: 114 FTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACG 159
>IMGA|Medtr7g121000.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 28396391-28398938 E
EGN_Mt090430 20090702
Length = 793
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 139/421 (33%), Positives = 227/421 (53%), Gaps = 35/421 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ +G+ PD +T+ L ++ G IH YI K G++ + V NSL+ MY+
Sbjct: 360 MIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYT---- 415
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF-DLMPEQDVLSWSCLIDGYVR 119
KC + A VF D+ +++SW+ ++ ++
Sbjct: 416 ---------------------------KCSHLHDALNVFRDISRNANLVSWNAILSACLQ 448
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
K E +++EM SG KP+ +T+ ++L CA L +L G +H Y I + L L + +
Sbjct: 449 KKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTSLGVGNQVHCYSIKSGLILDVSV 508
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
L+DMYAKCG+++ A VF S + D+ W+S+I G+A GL E+L+LF M +
Sbjct: 509 CNGLIDMYAKCGSLKHARDVFDS--TQNLDIVSWSSLIVGYAQCGLGHEALNLFRIMTNL 566
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAE 298
GV+P+E+TYL LSAC+H GLV+E W + + ++G+ P EH++C+VD++ARAG + E
Sbjct: 567 GVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPPTREHFSCIVDLLARAGCLHE 626
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A F+ + + + LL C H +D+AE +++L+P V L N++A
Sbjct: 627 AETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNILKLDPSNSAAMVMLCNIHAS 686
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W++ +R+ M++MGV+K PG S++E+ H F + D SHP IY ML + SQ
Sbjct: 687 AGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSEDSSHPQRNLIYTMLEELWSQ 746
Query: 419 M 419
+
Sbjct: 747 V 747
Score = 131 bits (330), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/257 (32%), Positives = 123/257 (47%), Gaps = 34/257 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G FPD LTF + KA +LG +H ++ K+ + N+LI MY++F
Sbjct: 157 MTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHVIKSWFGHHLTSQNALISMYTNFGQ 216
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A VF IP K+L+SW +M I GY++
Sbjct: 217 IEHASNVFTRIPTKDLISWGTM-------------------------------ITGYIQL 245
Query: 121 GDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G EAL +F ++ G +PNE SV AC+ L L+ G+ +H + L +
Sbjct: 246 GYRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFA 305
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL DMYAK G + A F +K D+ WN++I FA +G E++D F +M +
Sbjct: 306 GCSLCDMYAKFGFLPSAKMAFCQ--IKNPDIVSWNAIIAAFADNGDANEAIDFFRQMIHI 363
Query: 240 GVKPDEITYLNLLSACA 256
G+ PD ITY++LL C
Sbjct: 364 GLTPDSITYISLLCTCG 380
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 163/337 (48%), Gaps = 9/337 (2%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKN----LVSWNSMLDGYAKCGDISMARQVFDLMPE 104
SL+ ++FR + A+K+ D + N ++ N M++ Y KCG + AR+VFD M
Sbjct: 69 TSLVLACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTMQL 128
Query: 105 QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
+V+SW+ +I GY + G ++A+ ++ +M SG P+++T SV+ AC G +D GR +
Sbjct: 129 PNVVSWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQL 188
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
H +VI + L + +L+ MY G I+ A +VF + D+ W +MI G+ G
Sbjct: 189 HAHVIKSWFGHHLTSQNALISMYTNFGQIEHASNVFTR--IPTKDLISWGTMITGYIQLG 246
Query: 225 LVKESLDLFSEMHIVGV-KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY 283
E+L LF ++ G +P+E + ++ SAC+ ++ K G+
Sbjct: 247 YRVEALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAG 306
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
+ D+ A+ G + A CQI P A++ ++G + A R++I +
Sbjct: 307 CSLCDMYAKFGFLPSAKMAFCQIK-NPDIVSWNAIIAAFADNGDANEAIDFFRQMIHIGL 365
Query: 344 HQDG-RYVGLSNVYAIFRRWDKARSMREAMERMGVKK 379
D Y+ L R ++ R + + ++G K
Sbjct: 366 TPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDK 402
Score = 124 bits (312), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 120/257 (46%), Gaps = 33/257 (12%)
Query: 1 MLRVGVF-PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
+LR G + P+ F + A + LL+ E G +HG K G
Sbjct: 258 LLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLR----------------- 300
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
R VF G S+ D YAK G + A+ F + D++SW+ +I +
Sbjct: 301 -----RNVFAGC---------SLCDMYAKFGFLPSAKMAFCQIKNPDIVSWNAIIAAFAD 346
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
GD +EA+ F +M G P+ +T +S+LC C L++GR +H Y++ + +
Sbjct: 347 NGDANEAIDFFRQMIHIGLTPDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITV 406
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
SL+ MY KC + +AL+VFR + + +++ WN+++ E+ L+ EMH
Sbjct: 407 CNSLLTMYTKCSHLHDALNVFRD-ISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFS 465
Query: 240 GVKPDEITYLNLLSACA 256
G KPD IT LL CA
Sbjct: 466 GNKPDSITITTLLGTCA 482
>IMGA|Medtr3g151660.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 40264208-40265872 H
EGN_Mt090430 20090702
Length = 554
Score = 251 bits (640), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 125/351 (35%), Positives = 206/351 (58%), Gaps = 7/351 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N+ N++++ Y G + +A ++FD M +D++SWS LI V+ EAL+VF++M+
Sbjct: 111 NIFVQNALINAYGSRGSLDVAVKLFDEMRRRDIVSWSTLISCLVKNNLPAEALSVFQQMQ 170
Query: 135 VSGPKP----NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+ + M+SV+ A + LG ++ G +H +++ + +T+ L T+L++MY++C
Sbjct: 171 MGHRDIRNWLDRAIMLSVISAVSSLGVIELGIWVHSFIVRMGIVMTVPLGTALINMYSRC 230
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G I ++ VF M +V W ++I G A HG +E+L +F EM G+KPD ++
Sbjct: 231 GLIDRSVKVFDE--MPERNVVTWTALINGLAVHGRSREALKVFYEMKESGLKPDGALFIG 288
Query: 251 LLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+L AC+HGGLV++ W F+ + G+ P EHY CMVD++ RAG + EA+ F+ ++P++
Sbjct: 289 VLVACSHGGLVEDGWRVFESMRDEFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMPLK 348
Query: 310 PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMR 369
P + + LL C+NH L LAE ++IEL+P+ DG YV LSN Y W +R
Sbjct: 349 PNSVIWRTLLGACVNHNHLGLAEKARERIIELDPYHDGDYVLLSNAYGRVGNWGGKAGLR 408
Query: 370 EAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+M++ + K PG SFV + +H FV+ D HP E+I L I+ +K
Sbjct: 409 NSMKQNRIVKEPGLSFVHIDQVVHEFVSGDHVHPQWEEITKFLASIIDTVK 459
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 101/215 (46%), Gaps = 38/215 (17%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
ELG+ +H +I + G + +LI+MYS I + KVFD +P +N+V+W ++++G
Sbjct: 199 ELGIWVHSFIVRMGIVMTVPLGTALINMYSRCGLIDRSVKVFDEMPERNVVTWTALINGL 258
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
A + G R EAL VF EM+ SG KP+ +
Sbjct: 259 A--------------------------VHGRSR-----EALKVFYEMKESGLKPDGALFI 287
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSLVDMYAKCGAIQEALHVFRSGL 204
VL AC+H G ++ G + + D E + +L +VD+ + G I EA
Sbjct: 288 GVLVACSHGGLVEDGWRVFESMRD-EFGIKPMLEHYGCMVDLLGRAGLILEAFDFVEEMP 346
Query: 205 MKPSDVFIWNSMIGGFACH---GLVKESLDLFSEM 236
+KP+ V IW +++G H GL +++ + E+
Sbjct: 347 LKPNSV-IWRTLLGACVNHNHLGLAEKARERIIEL 380
>IMGA|AC233668_41.1 Pentatricopeptide repeat AC233668.2
172839-167990 E EGN_Mt090430 20090702
Length = 638
Score = 250 bits (639), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 165/518 (31%), Positives = 252/518 (48%), Gaps = 83/518 (16%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD + + L G +HG+ ++G D FV N+L+ MY+ + +A
Sbjct: 57 GILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDA 116
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRK 120
KVF+ + K++V+WN+M+ GY++ G A +F M E+ DV++WS +I GY ++
Sbjct: 117 NKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQR 176
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-------NEL 173
G EA+ VF +M +PN VT++S+L ACA +GAL G+ H Y + N+
Sbjct: 177 GFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDD 236
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
L + +L+DMYAKC +++ A +F K DV W MIGG+A HG +L LF
Sbjct: 237 TDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDANHALQLF 296
Query: 234 SEMHIVG--VKPDEITYLNLLSACAH-----------GGLVKEAWYFFDCLGKN------ 274
SEM + + P++ T +L ACA G V A FD + K
Sbjct: 297 SEMFKIDNCIVPNDFTISCVLMACARLAALKFDMYSKSGDVDTAQVVFDSMSKRNAVSWT 356
Query: 275 ------GMTPKSE------------------------------------------HYACM 286
GM +SE HYACM
Sbjct: 357 SLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSGMDFGVDPGVEHYACM 416
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
VD++ RAG++ EA + + +PI+PT + ALL+ C H +LAE +KL+EL+ D
Sbjct: 417 VDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADND 476
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSE 406
G Y LSN+YA RRW + M+R G+KK PG+S+V+ + F D++H S+
Sbjct: 477 GTYTLLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQ 536
Query: 407 QIYMMLGFIVSQMK-----HIVDYENQEYYFYDNEGKL 439
+IY L ++ ++K H VD E + ++ KL
Sbjct: 537 KIYETLADLIKRIKANFSLHDVDDEEKGDQLSEHSEKL 574
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 60/187 (32%), Positives = 105/187 (56%), Gaps = 6/187 (3%)
Query: 86 YAKCGDISMARQVFDLMPEQ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPN 141
Y KC + AR+VFD + + D ++W+ ++ Y + A+++F EM V G P+
Sbjct: 2 YGKCKAVVHARKVFDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPD 61
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
V +V++L C +LG GR +H + + + L + + +LVDMYAKCG +++A VF
Sbjct: 62 TVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNALVDMYAKCGKMEDANKVFE 121
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
M+ DV WN+M+ G++ +G +++L LF +M ++ D +T+ +++S A G
Sbjct: 122 R--MRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFG 179
Query: 262 KEAWYFF 268
EA F
Sbjct: 180 CEAMDVF 186
>IMGA|Medtr2g056270.1 Bacterial extracellular solute-binding
protein, family 3 chr02_pseudomolecule_IMGAG_V3
15362735-15360582 H EGN_Mt090430 20090702
Length = 717
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 151/435 (34%), Positives = 236/435 (54%), Gaps = 37/435 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR-ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+R G+ PD T A +S LK E G +H + + G SD VS +H
Sbjct: 309 MVRSGIRPDMFT-AIPAISSITKLKSIEWGKQLHAQVIRNG--SDYQVS---VH------ 356
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
NS++D Y+ C D++ AR++F L+ ++ V+SWS +I GY
Sbjct: 357 --------------------NSLVDMYSTCADLNSARKIFGLIKDRTVVSWSAMIKGYAM 396
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ EAL++F EM++SG K + V ++++L A A +GAL +H Y + L L
Sbjct: 397 HDNCLEALSLFIEMKLSGTKVDLVIVINILPAFAKIGALHYVGYLHGYSLKTNLDSLKSL 456
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+TSL++ YAKCG I+ A +F D+ WNSMI ++ HG + +L++++ +
Sbjct: 457 KTSLLNSYAKCGCIEMARKLFNEEKSSLKDIVAWNSMITAYSNHGEWFQCFELYNQIKLS 516
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFF-DCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
VKPD +T+L +L+AC + GLV + F + + G P EH ACMVD++ RAG++ E
Sbjct: 517 IVKPDHVTFLGMLTACVNSGLVDKGKEIFKEMVDIYGFQPSKEHNACMVDLLGRAGKIDE 576
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHG-KLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
A + + + A + G LL+ C HG + D AE KLI++EP YV LSN++A
Sbjct: 577 ARKIIETNQLNSDARVYGPLLSACKMHGLETDFAELAAEKLIKMEPENPANYVLLSNIFA 636
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
+WDK MR + G+KK+PG S+V + G H F D SHP SE IY +L V
Sbjct: 637 AAGKWDKFAKMRSFLRDRGLKKTPGCSWVVLDGQFHEFRVADHSHPRSEDIYSVLK--VL 694
Query: 418 QMKHIVDYENQEYYF 432
+++ ++ ++ E++F
Sbjct: 695 ELEAGMEDDDLEFFF 709
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 156/357 (43%), Gaps = 42/357 (11%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
K L ++L YAK + AR +F+ MPE+DV+ W+ +I Y G E+L + M
Sbjct: 250 KELTVNTALLSMYAKLDSLKDARLMFEKMPEKDVVVWNIMISVYSGSGCPKESLELVYCM 309
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
SG +P+ T + + + L +++ G+ +H VI N + + SLVDMY+ C +
Sbjct: 310 VRSGIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADL 369
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
A +F GL+K V W++MI G+A H E+L LF EM + G K D + +N+L
Sbjct: 370 NSARKIF--GLIKDRTVVSWSAMIKGYAMHDNCLEALSLFIEMKLSGTKVDLVIVINILP 427
Query: 254 ACAHGGLVKEAWYF--------FDCLGKNGMTPKSEHYACMVDVMARA------------ 293
A A G + Y D L + + + C MAR
Sbjct: 428 AFAKIGALHYVGYLHGYSLKTNLDSLKSLKTSLLNSYAKCGCIEMARKLFNEEKSSLKDI 487
Query: 294 -------------GQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRK 337
G+ + ++ QI ++P +L C+N G +D + + ++
Sbjct: 488 VAWNSMITAYSNHGEWFQCFELYNQIKLSIVKPDHVTFLGMLTACVNSGLVDKGKEIFKE 547
Query: 338 LIELEPHQDGRYVGLSNVYAIFR--RWDKARSMREAMERMGVKK--SPGYSFVEMHG 390
++++ Q + V + R + D+AR + E + + P S +MHG
Sbjct: 548 MVDIYGFQPSKEHNACMVDLLGRAGKIDEARKIIETNQLNSDARVYGPLLSACKMHG 604
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/326 (23%), Positives = 137/326 (42%), Gaps = 39/326 (11%)
Query: 1 MLRVGVFPDH-LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M++ + PD F L ++ L + HG++ K G ++ V N+LI +Y
Sbjct: 110 MVQKSMCPDEDCCFSVLKSLFYVFHEKGLIMMAHGHVVKLGMDAFDLVGNTLIELYGFL- 168
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
N + + V L WN+++ + G I
Sbjct: 169 ---NGNGLVERKSVTKLNFWNNLIYEAYESGKIV-------------------------- 199
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
E+ +F MR +PN VT++++L A +L G+++H V+ + L L +
Sbjct: 200 -----ESFELFCRMRNENVQPNSVTLINLLRATVESNSLKIGKVLHSLVVASNLCKELTV 254
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T+L+ MYAK ++++A +F M DV +WN MI ++ G KESL+L M
Sbjct: 255 NTALLSMYAKLDSLKDARLMFEK--MPEKDVVVWNIMISVYSGSGCPKESLELVYCMVRS 312
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G++PD T + +S+ ++ + +NG + + +VD+ + + A
Sbjct: 313 GIRPDMFTAIPAISSITKLKSIEWGKQLHAQVIRNGSDYQVSVHNSLVDMYSTCADLNSA 372
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNH 325
+ I + S A++ G H
Sbjct: 373 RKIFGLIKDRTVVSW-SAMIKGYAMH 397
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 9/185 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+ ++D Y+ G + + ++F D + ++ + G+Y++ L +++EM
Sbjct: 57 SKLIDSYSNFGLLHFSHKIFSFTENPDSIIYNAFLRNLFMFGEYEKTLFLYKEMVQKSMC 116
Query: 140 PNEVTMVSVLCACAHLGALDKGRMM--HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
P+E SVL + ++ +KG +M H +V+ + ++ +L+++Y G +
Sbjct: 117 PDEDCCFSVLKSLFYVFH-EKGLIMMAHGHVVKLGMDAFDLVGNTLIELY---GFLNGNG 172
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
V R + K + WN++I G + ES +LF M V+P+ +T +NLL A
Sbjct: 173 LVERKSVTKLN---FWNNLIYEAYESGKIVESFELFCRMRNENVQPNSVTLINLLRATVE 229
Query: 258 GGLVK 262
+K
Sbjct: 230 SNSLK 234
>IMGA|AC233680_25.1 Pentatricopeptide repeat AC233680.1
106255-104220 E EGN_Mt090430 20090702
Length = 561
Score = 250 bits (638), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/459 (30%), Positives = 236/459 (51%), Gaps = 42/459 (9%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+G PD + +A L +LG IHGYI ++ D +V SL+ MY +
Sbjct: 12 LGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDMYVKNDCLEK 71
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVR 119
A+ V KN+ +WNS++ GY+ G A ++ + M E+ D+++W+ L+ GY
Sbjct: 72 AQAVLHRAKNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLVTWNGLVSGYSM 131
Query: 120 KGDYDEALAV-----------------------------------FEEMRVSGPKPNEVT 144
+G DEAL + F +M+ KPN T
Sbjct: 132 QGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQMQAENVKPNSTT 191
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+ S+LCACA L KG +H + + + + T+L+DMY++ G ++ A +VF
Sbjct: 192 ICSLLCACAGPSLLKKGEELHCFSMKLGFVDDIYVATALIDMYSEAGKLKVAYNVFNK-- 249
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
++ + WN M+ G+A H +E + L+ +M ++PD IT+ LLSAC + GLV E
Sbjct: 250 IQEKTLPCWNCMMMGYAIHSHGEEVMILYDKMRERHIRPDAITFTALLSACKNSGLVDEG 309
Query: 265 WYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCM 323
W +FD + ++ + P EHY CMVD++ ++G + EA F+ +PI+P AS+ GALL C
Sbjct: 310 WKYFDSMQEDYNIVPTIEHYCCMVDLLGKSGFLDEASHFIETMPIKPDASIWGALLASCK 369
Query: 324 NHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGY 383
H + LAE RKL ++EP+ YV + N+Y+ RW ++ +M + +K P +
Sbjct: 370 IHKNIKLAEIAARKLFKMEPNNSANYVLMMNLYSSLNRWVAVERLKHSMTVLAMKIPPVW 429
Query: 384 SFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
S+ +++ ++H F + HP +IY L ++S+++ +
Sbjct: 430 SWTQVNQSIHVFSTEGRPHPEEGEIYFELYQLISEIRKL 468
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 100/199 (50%), Gaps = 5/199 (2%)
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L F + G KP+ ++ S L A LG G+ +H Y++ + L + + TSLVDM
Sbjct: 3 LTSFRSLHSLGFKPDSCSVTSALQAVIELGFFKLGKEIHGYIMRSNLNYDVYVCTSLVDM 62
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y K +++A V K +V WNS+I G++ G E++ L ++M G+ PD +
Sbjct: 63 YVKNDCLEKAQAVLHRA--KNKNVCAWNSLISGYSFKGQFGEAVKLLNQMVEEGITPDLV 120
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
T+ L+S + G + EA + + +G+TP + ++ ++ + +A + Q+
Sbjct: 121 TWNGLVSGYSMQGRIDEALTIINRIKSSGITPNVVSWTALISGCSQNEKYMDALKIFSQM 180
Query: 307 P---IQPTASMLGALLNGC 322
++P ++ + +LL C
Sbjct: 181 QAENVKPNSTTICSLLCAC 199
>IMGA|Medtr3g012790.1 pentatricopeptide, related
chr03_pseudomolecule_IMGAG_V3 2245673-2244234 E
EGN_Mt090430 20090702
Length = 479
Score = 249 bits (637), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 145/394 (36%), Positives = 219/394 (55%), Gaps = 43/394 (10%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ TF F+ K A L LG +H + K G+E+ +V NSLIHMY +DI
Sbjct: 108 PDNFTFSFILKIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDI------ 161
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
+A Q+F+ M + +++SW+ +ID +V G Y+EA+
Sbjct: 162 -------------------------EIAHQLFEEMYQPNLVSWNSIIDCHVYCGKYNEAI 196
Query: 128 AVFEEMRVSGP-----KPNEVTMVSVLCACAHLGALDKGRMMHHYVID--NELPLTLVLR 180
+F +M +P+ T+V L AC +G+LD GR +H +V D N ++ +
Sbjct: 197 DLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFGRKVHSFVRDGVNSFGESISVF 256
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIV 239
+LVDMYAKCGA++EA F + MK +V WN MI GFA HG +E+L LF+ M H
Sbjct: 257 NALVDMYAKCGAVEEAYETFSN--MKRKNVVSWNVMILGFASHGNGEEALALFTRMLHEN 314
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
+PDEIT+L +L AC+HGGLV E +F+ + ++ + P +HY CMVD++ RAG E
Sbjct: 315 VERPDEITFLCVLCACSHGGLVDEGRRYFEIMNRDYNIKPTIKHYGCMVDLLGRAGLFVE 374
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
AY+ + +P++ A + LL C N+G ++L E V + L+ELEP YV L+N+YA
Sbjct: 375 AYELIKSMPVECNAIIWRTLLAACRNYGNVELGEKVRKHLMELEPDHSSDYVLLANMYAS 434
Query: 359 FRRWDKARSMREAMERMGVKK-SPGYSFVEMHGA 391
+W++ R +M+ V+K PG SF+ + G
Sbjct: 435 TGQWNEMSKERRSMQERRVRKPEPGNSFIGIPGT 468
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 111/245 (45%), Gaps = 12/245 (4%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD-EALAVFEEMRVSGPKPNEVTMVSVL 149
+++ A VFD +P+ D W+ +I G+ + A+ F+ M+++ +P+ T +L
Sbjct: 59 NMNYALNVFDKIPKPDSFLWNTMIRGFGNSTTHSHNAIHFFKRMQLA-HRPDNFTFSFIL 117
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
A L ++ G+ +H + +R SL+ MY I+ A +F M +
Sbjct: 118 KIIARLRFVNLGKQLHCSLFKFGFENHTYVRNSLIHMYGMLKDIEIAHQLFEE--MYQPN 175
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEM-----HIVGVKPDEITYLNLLSACAHGGLVK-- 262
+ WNS+I G E++DLF++M + + ++PD T + LSAC G +
Sbjct: 176 LVSWNSIIDCHVYCGKYNEAIDLFTKMVQQQHNGMELQPDHATLVVTLSACGAIGSLDFG 235
Query: 263 EAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC 322
+ F G N + +VD+ A+ G V EAY+ + + S ++ G
Sbjct: 236 RKVHSFVRDGVNSFGESISVFNALVDMYAKCGAVEEAYETFSNMKRKNVVS-WNVMILGF 294
Query: 323 MNHGK 327
+HG
Sbjct: 295 ASHGN 299
>IMGA|Medtr7g015110.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 3728010-3729994 E
EGN_Mt090430 20090702
Length = 654
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 151/446 (33%), Positives = 237/446 (53%), Gaps = 46/446 (10%)
Query: 4 VGVFPDHLTFPFLAKA------SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
+G+ + T+ ++ KA S C L++ G IH +I + GYE V +L
Sbjct: 169 IGIPSNRFTYTYVLKACVVSELSICPLRK--GKEIHAHILRHGYEGHVHVMTTL------ 220
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
LD YA+ G +S A VF MP+++++SWS +I Y
Sbjct: 221 -------------------------LDVYARFGYVSYASSVFGAMPDKNIVSWSAMIACY 255
Query: 118 VRKGDYDEALAVFEEMRVSG--PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
+ +AL +F+ M + PN +TMVSVL ACA L AL+ G+++H YV+ L
Sbjct: 256 AKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDS 315
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
TL + +L+ MY +CG I VF MK DV WNS+I + HGL K+++ +F
Sbjct: 316 TLPVLNTLITMYGRCGEISTGQRVF--DYMKKRDVISWNSLISIYGMHGLGKKAIQIFEN 373
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAG 294
M GV P IT++ +L AC+H GLV+EA F+ L K + P+ EHYACMVD++ RA
Sbjct: 374 MINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVDILGRAN 433
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
++ EA + + + +P ++ G+LL C H ++LAE L ELEP G YV LS+
Sbjct: 434 RLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGNYVLLSH 493
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGF 414
+YA R W+ R +R+ +E G++K P S++E+ ++ V+ ++ +P E++ L
Sbjct: 494 IYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEELCAFLIT 553
Query: 415 IVSQMKH--IVDYENQEYYFYDNEGK 438
+++++K+ V N Y D E K
Sbjct: 554 LLTEIKNQGYVPQTNVVTYDLDEEEK 579
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 121/268 (45%), Gaps = 49/268 (18%)
Query: 8 PDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
P TF L ++C+ + L G+ +H + +G + D +++ LI+MY + +A
Sbjct: 72 PTKKTFELLI--NSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHAC 129
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KVFD K + WN++ A MA + DL
Sbjct: 130 KVFDETREKTIFVWNAIFRALA------MASRGEDL------------------------ 159
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACA----HLGALDKGRMMHHYVIDNELPLTLVLRT 181
L ++ +M G N T VL AC + L KG+ +H +++ + + + T
Sbjct: 160 -LVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGYEGHVHVMT 218
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+L+D+YA+ G + A VF G M ++ W++MI +A + + ++L+LF M +
Sbjct: 219 TLLDVYARFGYVSYASSVF--GAMPDKNIVSWSAMIACYAKNEMPMKALELFQIMMLEAC 276
Query: 242 K--PDEITYLNLLSACA------HGGLV 261
P+ IT +++L ACA HG LV
Sbjct: 277 DTVPNPITMVSVLQACASLAALEHGKLV 304
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 94/211 (44%), Gaps = 12/211 (5%)
Query: 103 PEQDVLSWSC--LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
P +D+ S + LI R G+ +A+ ++ P P + T ++ +C +L
Sbjct: 37 PTKDIKSNNNDDLIQSLCRGGNLKQAV----QLLCCEPNPTKKTFELLINSCIEQNSLSD 92
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G +HH ++ + L L T L++MY G++ A VF + +F+WN++
Sbjct: 93 GVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACKVFDE--TREKTIFVWNAIFRAL 150
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL----VKEAWYFFDCLGKNGM 276
A ++ L L+ +M+ +G+ + TY +L AC L +++ + ++G
Sbjct: 151 AMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSELSICPLRKGKEIHAHILRHGY 210
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++DV AR G V+ A +P
Sbjct: 211 EGHVHVMTTLLDVYARFGYVSYASSVFGAMP 241
>IMGA|Medtr2g026800.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 7374585-7371659 E
EGN_Mt090430 20090702
Length = 727
Score = 249 bits (637), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 135/385 (35%), Positives = 205/385 (53%), Gaps = 1/385 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ G P+ + L A G +HG + K G++ F+ ++I+ Y++
Sbjct: 308 MLQTGHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRGFDCYNFIQTTIIYFYAACGM 367
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A F+ +L SWN++ G+ K G + A + FD M +DV SWS +I GY +
Sbjct: 368 MDLACLQFEVGVKDHLESWNALTAGFIKNGMMDHALKTFDKMHVRDVFSWSTMISGYAQS 427
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
AL +F +M G KPNEVTMVSV A A LG L +G++ H Y+ +P LR
Sbjct: 428 EHPKMALELFHKMLAGGIKPNEVTMVSVFSAIATLGTLQEGKLAHEYMRSESIPFNDNLR 487
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAKCG+I AL F + S V WN++I G A HG L++FS+M
Sbjct: 488 AALIDMYAKCGSINSALQFFNQIRDEVSSVSPWNAIICGLASHGHASMCLEVFSDMQRFH 547
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+KP+ IT++ +LSAC H GLV+ F + + P +HY CM+D++ RAG + EA
Sbjct: 548 IKPNPITFIGVLSACCHAGLVESGKRIFKTMKSAYNVEPDIKHYGCMIDILGRAGLLEEA 607
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +P++ + G LL C HG +++ E L L P G V LSN+YA
Sbjct: 608 EEMIRSMPMEADIVIWGTLLAACRTHGNVNIGERAAENLARLAPSHGGGKVLLSNIYANA 667
Query: 360 RRWDKARSMREAMERMGVKKSPGYS 384
+W++ +R M+ + + PGYS
Sbjct: 668 GKWEEVSFVRSVMQGQTMDREPGYS 692
Score = 169 bits (427), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 151/276 (54%), Gaps = 29/276 (10%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH I K G + F+ NSLI+MY+ DI NA+ +FDG + VS N M+ GY +
Sbjct: 72 GRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLFDGFATLDSVSCNIMVSGYVR 131
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G I AR++FD+MP + +S++ +I G+V+ G + EAL VF++MR G PN++T+V+V
Sbjct: 132 NGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALEVFKDMRSCGVVPNDLTLVNV 191
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF-------- 200
+ AC+HLG + RM+H V+ + +++ T+L+ Y C ++EA +F
Sbjct: 192 ISACSHLGEVLNCRMVHGLVVKMFVVGLVIVSTNLMHAYCLCSGVREARRLFDEMPERNL 251
Query: 201 -----------RSGLMKPS----------DVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++GL+ + DV W +MI G+ G ++E+L+++ M
Sbjct: 252 VTWNVMLNGYAKTGLVDEARELFDGICDKDVISWGTMIDGYIQKGRLREALEIYRAMLQT 311
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNG 275
G P+E+ +NL+SAC G + + W + K G
Sbjct: 312 GHGPNEVMIVNLVSACGRGTAIVDGWQLHGTVVKRG 347
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 76/150 (50%), Gaps = 29/150 (19%)
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+E+ +VS L +C+ L + +GR +H + L ++ SL++MYAKCG I+ A +F
Sbjct: 52 SELALVSALKSCSSLSFISQGRQIHSLIFKLGLHFNTFIQNSLINMYAKCGDIKNAQLLF 111
Query: 201 -------------------RSG----------LMKPSDVFIWNSMIGGFACHGLVKESLD 231
R+G +M + +MI GF +G +E+L+
Sbjct: 112 DGFATLDSVSCNIMVSGYVRNGQIDNARKLFDVMPNKGCVSYTTMIMGFVQNGFFREALE 171
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+F +M GV P+++T +N++SAC+H G V
Sbjct: 172 VFKDMRSCGVVPNDLTLVNVISACSHLGEV 201
>IMGA|Medtr8g139760.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 34188062-34189939 H
EGN_Mt090430 20090702
Length = 625
Score = 249 bits (636), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 227/417 (54%), Gaps = 5/417 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD TF L A ++ G +H ++ K+G+ + V+NS++ Y+ +A KV
Sbjct: 202 PDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFYAKLECHGDAVKV 261
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F+ N VSWN+++D + K GD A F PE++++SW+ +I GY R G+ D AL
Sbjct: 262 FNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIVGYTRNGNGDLAL 321
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
++F +M+ + + +++ +VL ACA L L G+M+H +I L L + SL++MY
Sbjct: 322 SLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMVHSCIIHLGLDKYLFVGNSLINMY 381
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AKCG I+ + R + D+ WNSM+ F +G E++ +F EM GV+PDE+T
Sbjct: 382 AKCGDIEGSKLALRG--INDKDLVSWNSMLFAFGLNGRGNEAICMFREMVASGVRPDEVT 439
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+ LL C+H GL+ E + FF + + G+ +H ACMVD++ R G VAEA +
Sbjct: 440 FTGLLMTCSHLGLIDEGFAFFQSMSLEYGLVQGMDHVACMVDMLGRGGYVAEAQSLARKY 499
Query: 307 --PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
+ + LL C HG L +VG + LEP ++ YV LSN+Y +W +
Sbjct: 500 SKTSRDKTNSCEVLLGACHAHGDLGTGSSVGEYVKNLEPKKEVGYVLLSNMYCASGKWKE 559
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
A +R+ M GVKK PG S++E+ + FV+ + +P I +L F+ +M+H
Sbjct: 560 AEMVRKEMMDQGVKKVPGCSWIEIRNVVTAFVSGNNLYPCMADISKILYFLELEMRH 616
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 133/289 (46%), Gaps = 35/289 (12%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ ++ + A G +H + +GY+S V+N+LI MY + +ARKV
Sbjct: 70 PDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPNDARKV 129
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + N V+W S+L YA MA ++F MPE+ ++W+ +I + R G+ + L
Sbjct: 130 FDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRSMPEKVEIAWNIIIAAHARCGEVEACL 189
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F+EM + +P++ T +++ AC G MMH +VI + + + S+V Y
Sbjct: 190 HLFKEMCENLYQPDQWTFSALMSACTESMESLHGCMMHCFVIKSGWSTAMEVNNSIVSFY 249
Query: 188 AKCGAIQEALHVFRSG--------------LMKPSD---------------VFIWNSMIG 218
AK +A+ VF SG MK D + W SMI
Sbjct: 250 AKLECHGDAVKVFNSGGAFNQVSWNAIIDAHMKVGDTQKALLAFQQAPEKNIVSWTSMIV 309
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA------HGGLV 261
G+ +G +L LF +M + D++ +L ACA HG +V
Sbjct: 310 GYTRNGNGDLALSLFLDMKRNSFQLDDLVAGAVLHACASLAILVHGKMV 358
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-R 134
L+ S + A+ G I AR++FD MPE+D ++W+ ++ Y R G Y + +F+ M R
Sbjct: 5 LIRATSEIVSLARSGRICHARKLFDEMPERDTVAWNAMLTAYSRLGLYQQTFDLFDSMRR 64
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
+S KP+ + + + +CA + G +H V+ + +L + +L+DMY KC
Sbjct: 65 ISDSKPDNFSYSAAINSCAGASDIRFGTKLHSLVVVSGYQSSLPVANALIDMYGKCFNPN 124
Query: 195 E-------------------------------ALHVFRSGLMKPSDVFI-WNSMIGGFAC 222
+ A +FRS P V I WN +I A
Sbjct: 125 DARKVFDEMNYSNEVTWCSLLFAYANTCRFDMAFEIFRS---MPEKVEIAWNIIIAAHAR 181
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
G V+ L LF EM +PD+ T+ L+SAC
Sbjct: 182 CGEVEACLHLFKEMCENLYQPDQWTFSALMSACTE 216
>IMGA|Medtr4g149390.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 37121027-37124189 H
EGN_Mt090430 20090702
Length = 1009
Score = 249 bits (635), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 228/428 (53%), Gaps = 36/428 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P L F L SA L EL IHG I K G D F ++LI
Sbjct: 442 PTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALI--------------- 486
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
D Y+KC + AR VF+ + ++D++ W+ + GY ++ + +E+L
Sbjct: 487 ----------------DVYSKCSRVGDARLVFEEIQDKDIVVWTAMFSGYTQQSENEESL 530
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+++ +++S KPNE T +V+ A +++ +L G+ H+ VI + +LVDMY
Sbjct: 531 KLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMY 590
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AK G+I+EA F S K D WNSMI +A HG +++L +F +M + G+KP+ +T
Sbjct: 591 AKSGSIEEAHKAFISTNWK--DTACWNSMIATYAQHGEAEKALQVFEDMIMEGLKPNYVT 648
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++ +LSAC+H GL+ + FD + + G+ P EHY CMV ++ RAG++ EA +F+ ++P
Sbjct: 649 FVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMP 708
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
I+ A + +LL+ C G ++L I P G YV LSN++A W R
Sbjct: 709 IKQAAVVWRSLLSACRVSGNVELGTYAAEMAISCNPADSGSYVLLSNIFASKGMWVNVRR 768
Query: 368 MREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYEN 427
+RE M+ GV K PG S++E++ +H+F+A D +H S I ++L ++ Q+K Y +
Sbjct: 769 LREKMDISGVVKEPGCSWIEVNNEIHKFIAKDTAHRDSAPISLVLDNLLLQIK---GYSS 825
Query: 428 QEYYFYDN 435
Y + N
Sbjct: 826 SSYNIFLN 833
Score = 130 bits (328), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 158/339 (46%), Gaps = 34/339 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R+G PD + + L+ E G +H Y K ++D FV N LI MY
Sbjct: 334 MARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMY----- 388
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKC ++ AR+VF+LM D++S++ +I+GY R+
Sbjct: 389 --------------------------AKCDSLTDARKVFNLMAAIDLVSYNAMIEGYSRQ 422
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL +F EMR+S P + VS+L A L L+ +H +I + L
Sbjct: 423 DKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAG 482
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+D+Y+KC + +A VF ++ D+ +W +M G+ +ESL L+ + +
Sbjct: 483 SALIDVYSKCSRVGDARLVFEE--IQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSR 540
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+KP+E T+ +++A ++ ++ F + + K G +VD+ A++G + EA+
Sbjct: 541 LKPNEFTFAAVITAASNIASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAH 600
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+ + TA +++ HG+ + A V +I
Sbjct: 601 KAFISTNWKDTACW-NSMIATYAQHGEAEKALQVFEDMI 638
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 120/220 (54%), Gaps = 2/220 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +D Y KC + + R++FD M +++V+SW+ +I G ++ + +AL +F EM G
Sbjct: 281 NGFIDFYFKCHKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWN 340
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ SVL +C L AL+KGR +H Y I + ++ L+DMYAKC ++ +A V
Sbjct: 341 PDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDARKV 400
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F LM D+ +N+MI G++ + E+LDLF EM + P + +++LL A
Sbjct: 401 F--NLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASLY 458
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
++ + + K G++ + ++DV ++ +V +A
Sbjct: 459 HLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDA 498
Score = 98.6 bits (244), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 102/201 (50%), Gaps = 8/201 (3%)
Query: 61 IPNARKVFDGIPV-----KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLID 115
IP +K+ I V ++ N++L Y+K ++ A ++FD M +++++WS ++
Sbjct: 54 IPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHKNLVTWSSMVS 113
Query: 116 GYVRKGDYDEALAVFEE-MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
Y EAL +F + MR KPNE + SV+ AC G L+ +H V+
Sbjct: 114 MYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQIHGLVVKGGYV 173
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ + TSL+D Y K I +A +F +K S F W ++I G++ G + SL LF
Sbjct: 174 QDVYVCTSLIDFYTKHACIDDARLLFDGLQVKTS--FTWTTIIAGYSKQGRSQVSLKLFD 231
Query: 235 EMHIVGVKPDEITYLNLLSAC 255
+M V PD+ ++LSAC
Sbjct: 232 QMKEGHVCPDKYVLSSVLSAC 252
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 35/233 (15%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
L IHG + K GY D +V SLI D Y K
Sbjct: 160 ALQIHGLVVKGGYVQDVYVCTSLI-------------------------------DFYTK 188
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
I AR +FD + + +W+ +I GY ++G +L +F++M+ P++ + SV
Sbjct: 189 HACIDDARLLFDGLQVKTSFTWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSV 248
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC L L+ G+ +H YV+ + + + + + +D Y KC +Q +F M
Sbjct: 249 LSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVNGFIDFYFKCHKVQLGRKLFDR--MVDK 306
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+V W ++I G + +++LDLF EM +G PD ++L++C G LV
Sbjct: 307 NVVSWTTVIAGCMQNSFHRDALDLFVEMARMGWNPDAFGCTSVLNSC--GSLV 357
>IMGA|Medtr2g074200.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 16959950-16962915 H
EGN_Mt090430 20090702
Length = 975
Score = 248 bits (632), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 222/405 (54%), Gaps = 34/405 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T L A A L G IHG + + G+E D F+ SL+ +Y
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLY--------- 547
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+CG I +A+ FD M E++++ W+ +I+G+ +
Sbjct: 548 ----------------------VQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPF 585
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+AL +F +M S P+E++++ L AC+ + AL G+ +H + + + L + SL+
Sbjct: 586 DALDMFHQMLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLI 645
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG ++++ ++F +K WN +I G+ HG +++++LF M G +PD
Sbjct: 646 DMYAKCGCMEQSQNIFDRVHLKGE--VTWNVLITGYGIHGHGRKAIELFKSMQNAGFRPD 703
Query: 245 EITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T++ LL+AC H GLV E Y G+ PK EHYAC+VD++ RAG++ EA + +
Sbjct: 704 SVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEHYACVVDMLGRAGRLNEALELV 763
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
++P +P + + +LL+ C N+ LD+ E V KL+EL P + YV +SN YA +WD
Sbjct: 764 NELPDKPDSRIWSSLLSSCRNYRDLDIGEKVANKLLELGPDKAENYVLISNFYARLGKWD 823
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQI 408
+ R MR+ M+ +G++K G S++E+ G + RF+ D+S S +I
Sbjct: 824 EVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFLVGDESLLQSMKI 868
Score = 121 bits (303), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 127/251 (50%), Gaps = 37/251 (14%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ T P + KA + LG A+HG+ K SD FV N+LI MY F + +A KV
Sbjct: 194 PDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKV 253
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD +P +NLVSWNS++ ++CL +G ++E+
Sbjct: 254 FDKMPQRNLVSWNSVM--------------------------YACLENGV-----FEESY 282
Query: 128 AVFEEMRV--SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+F+ + G P+ TMV+V+ CA G + G + H + L L + +SL+D
Sbjct: 283 GLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLD 342
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPD 244
MY+KCG + EA +F + +V WNSMIGG++ + + +L +M + VK +
Sbjct: 343 MYSKCGYLCEARVLFDT---NEKNVISWNSMIGGYSKDRDFRGAFELLRKMQMEDKVKVN 399
Query: 245 EITYLNLLSAC 255
E+T LN+L C
Sbjct: 400 EVTLLNVLPVC 410
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 89/303 (29%), Positives = 153/303 (50%), Gaps = 12/303 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+ + GYAKCG + A VF M + V SW+ LI G+V+ G +AL ++ MR SG +
Sbjct: 440 NAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLE 499
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T+ S+L ACA L +L G+ +H ++ N L + SLV +Y +CG I A
Sbjct: 500 PDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLAKLF 559
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F + M+ ++ WN+MI GF+ + ++LD+F +M + PDEI+ + L AC+
Sbjct: 560 FDN--MEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQVS 617
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
++ K+ +T S ++D+ A+ G + ++ ++ ++ + L+
Sbjct: 618 ALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTW-NVLI 676
Query: 320 NGCMNHGKLDLAETVGRKLIEL-EPHQDGRYVGLSNVY-AIFRRWDKARSMREAMERMGV 377
G HG GRK IEL + Q+ + S + A+ + A + E +E +G
Sbjct: 677 TGYGIHGH-------GRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQ 729
Query: 378 KKS 380
+S
Sbjct: 730 MQS 732
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 122/253 (48%), Gaps = 34/253 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T + A + LG+ HG K G + V++SL+ MYS + A
Sbjct: 294 GLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKCGYLCEA 353
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R +FD KN++SWNSM+ GY+K D R F+L+ RK +
Sbjct: 354 RVLFD-TNEKNVISWNSMIGGYSKDRDF---RGAFELL----------------RKMQME 393
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT-LVLRTSL 183
+ + V NEVT+++VL C K + +H Y + + + ++ +
Sbjct: 394 DKVKV-----------NEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVANAF 442
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
V YAKCG++ A VF M+ V WN++IGG +G +++LDL+ M G++P
Sbjct: 443 VAGYAKCGSLHYAEGVFCG--MESKMVSSWNALIGGHVQNGFPRKALDLYLLMRGSGLEP 500
Query: 244 DEITYLNLLSACA 256
D T +LLSACA
Sbjct: 501 DLFTIASLLSACA 513
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 127/259 (49%), Gaps = 14/259 (5%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPV-----KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
L+ + +++I RK+ + I ++V ++ Y+ C + VF+ +
Sbjct: 99 LLQLCGEYKNIEIGRKIHNFISTSPHFQNDVVLITRLVTMYSICDSPYDSCLVFNASRRK 158
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
++ W+ L+ GY+R + +A+ VF EM ++ P+ T+ V+ AC + + G +
Sbjct: 159 NLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIKACVGVYDVRLGEAV 218
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC-- 222
H + + ++ + + +L+ MY K G ++ A+ VF M ++ WNS++ +AC
Sbjct: 219 HGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDK--MPQRNLVSWNSVM--YACLE 274
Query: 223 HGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
+G+ +ES LF + G+ PD T + ++ CA G V+ F K G+ +
Sbjct: 275 NGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHGLALKLGLCGEL 334
Query: 281 EHYACMVDVMARAGQVAEA 299
+ + ++D+ ++ G + EA
Sbjct: 335 KVNSSLLDMYSKCGYLCEA 353
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 100/222 (45%), Gaps = 41/222 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML ++PD ++ A + + LG +H + K+ FV+ SLI MY+
Sbjct: 594 MLSSKIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGC 653
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ++ +FD + +K V+WN ++ GY I G+ RK
Sbjct: 654 MEQSQNIFDRVHLKGEVTWNVLITGYG--------------------------IHGHGRK 687
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK-----GRMMHHYVIDNELPL 175
A+ +F+ M+ +G +P+ VT +++L AC H G + + G+M + I +L
Sbjct: 688 -----AIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGIKPKLEH 742
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
+VDM + G + EAL + KP D IW+S++
Sbjct: 743 Y----ACVVDMLGRAGRLNEALELVNELPDKP-DSRIWSSLL 779
>IMGA|Medtr5g024360.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 9670492-9667592 E
EGN_Mt090430 20090702
Length = 568
Score = 247 bits (630), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 142/390 (36%), Positives = 220/390 (56%), Gaps = 27/390 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV + +T A A + G +H + KAGY+ F SNS
Sbjct: 199 MGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFASNS---------- 248
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
N++ ++++ YAKCG +++AR++F+ MPE+++++W+C+I+ Y +
Sbjct: 249 --------------NVILATAIVEMYAKCGWLNVARELFNKMPERNIVAWNCMINAYNQY 294
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
Y+EAL +F M +G P++ T +SVL CA L G +H Y++ + + + L
Sbjct: 295 ERYNEALGLFFYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALA 354
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-V 239
T+L+DMYAK G + A +F + L K DV +W SMI A HG E+L LF M
Sbjct: 355 TALLDMYAKNGELGSAQKIFNNSLEK-KDVVMWTSMINALAIHGHGNEALSLFQIMQEDS 413
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
+ PD ITY+ +L AC+H GLV+EA F+ + K+ G+ P+ EHY+CMVD+++RAG E
Sbjct: 414 SLVPDHITYIGVLFACSHVGLVEEAQKQFNLMTKSYGILPEKEHYSCMVDLLSRAGHFRE 473
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + + + I+P ++ GALLNGC H + +A V +L ELEP Q G Y LSN+YA
Sbjct: 474 AEKLMETMSIRPNIAIWGALLNGCQIHENIPVASQVKVRLAELEPIQSGIYALLSNIYAN 533
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEM 388
+W++ R+ M+ + K+ G+S VEM
Sbjct: 534 SGKWEEVNRTRKMMKHKRIAKTIGHSSVEM 563
Score = 154 bits (389), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 100/333 (30%), Positives = 160/333 (48%), Gaps = 40/333 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ G PDH TFPF+ KA + + + G +H I K+G+E++ +V+ L++MY
Sbjct: 98 MLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMY----- 152
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+C ++ +VFD +P+ +V++W+CLI+GYV
Sbjct: 153 --------------------------VECKNMESGLKVFDKIPKWNVVAWTCLINGYVIN 186
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PL---- 175
EAL VF+EM G + NEVTMV+ L ACA +D GR +H V P
Sbjct: 187 DQPREALEVFKEMGRWGVEANEVTMVNALIACARCRDVDTGRWVHERVCKAGYDPFVFAS 246
Query: 176 --TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
++L T++V+MYAKCG + A +F M ++ WN MI + + E+L LF
Sbjct: 247 NSNVILATAIVEMYAKCGWLNVARELFNK--MPERNIVAWNCMINAYNQYERYNEALGLF 304
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M G PD+ T+L++LS CA ++ L K+ M ++D+ A+
Sbjct: 305 FYMLANGFCPDKATFLSVLSVCARRCVLALGETVHAYLLKSNMAKDIALATALLDMYAKN 364
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
G++ A + + M +++N HG
Sbjct: 365 GELGSAQKIFNNSLEKKDVVMWTSMINALAIHG 397
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 103/210 (49%), Gaps = 9/210 (4%)
Query: 71 IPVKNLVSW--NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
IP+ L+ + +S D Y + A +F + +V ++ +I GY + + +L
Sbjct: 39 IPLSKLIDFCVDSHFDEY-----FNYANLLFRQIHSPNVYIFNSMIKGYAKSNNPTMSLH 93
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
++++M +G P+ T VL AC+ + G+ +H ++ + + + T L++MY
Sbjct: 94 LYKQMLQNGYSPDHFTFPFVLKACSFIYDQVSGKCVHSCILKSGFEANVYVATGLLNMYV 153
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+C ++ L VF + +V W +I G+ + +E+L++F EM GV+ +E+T
Sbjct: 154 ECKNMESGLKVFDK--IPKWNVVAWTCLINGYVINDQPREALEVFKEMGRWGVEANEVTM 211
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
+N L ACA V + + + K G P
Sbjct: 212 VNALIACARCRDVDTGRWVHERVCKAGYDP 241
>IMGA|Medtr5g008630.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 1667185-1669420 E
EGN_Mt090430 20090702
Length = 669
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 134/393 (34%), Positives = 203/393 (51%), Gaps = 34/393 (8%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IHGY+ ++G E D V W ++LD Y K
Sbjct: 215 GKEIHGYLIRSGLELDEVV-------------------------------WTALLDLYGK 243
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
CG ++ AR +FD M ++D++SW+ +I G E ++F ++ SG +PNE T V
Sbjct: 244 CGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGV 303
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L ACA L A G+ +H Y+ ++LV +Y+KCG + A VF M
Sbjct: 304 LNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQ--MPRP 361
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW-YF 267
D+ W S+I G+A +G +L F + G KPDEIT++ +LSAC H GLV YF
Sbjct: 362 DLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYF 421
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
K+G+ ++HYAC++D++AR+G+ EA + +P++P + +LL GC HG
Sbjct: 422 HSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIIDNMPMKPDKFLWASLLGGCRIHGN 481
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
++LAE + L ELEP Y+ LSN+YA W + +R M+ G+ K PG S++E
Sbjct: 482 IELAERAAKALFELEPENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKKPGKSWIE 541
Query: 388 MHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+ +H F+ D SHP I+ LG + +MK
Sbjct: 542 IKRQVHVFLVGDTSHPKISDIHEYLGELSKKMK 574
Score = 169 bits (428), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 109/315 (34%), Positives = 171/315 (54%), Gaps = 6/315 (1%)
Query: 20 SACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV 77
+ACL R ELG +H + + + +SN LIHMY+ + +A+ +FD IP K+L
Sbjct: 71 AACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLC 130
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS- 136
SWN+M+ GYA G I AR++FD MP +D SW+ +I GYV +G Y EAL +F M+ +
Sbjct: 131 SWNTMISGYANVGRIEQARKLFDEMPHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENE 190
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
N T+ S L A A + +L +G+ +H Y+I + L L V+ T+L+D+Y KCG++ EA
Sbjct: 191 SSNCNMFTLSSALAAAAAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEA 250
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+F M D+ W +MI G KE LF ++ GV+P+E T+ +L+ACA
Sbjct: 251 RGIFDQ--MADKDIVSWTTMIHRCFEDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACA 308
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
+ + + G P S + +V V ++ G A + Q+P +P
Sbjct: 309 DLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETARRVFNQMP-RPDLVSWT 367
Query: 317 ALLNGCMNHGKLDLA 331
+L+ G +G+ D+A
Sbjct: 368 SLIVGYAQNGQPDMA 382
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/277 (30%), Positives = 135/277 (48%), Gaps = 36/277 (12%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ TF + A A L ++G +HGY+T+ GY+ F +++L+H+YS + A
Sbjct: 292 GVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASALVHVYSKCGNTETA 351
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
R+VF+ +P +LVSW S++ GYA+ G D
Sbjct: 352 RRVFNQMPRPDLVSWTSLIVGYAQ-------------------------------NGQPD 380
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSL 183
AL FE + SG KP+E+T V VL AC H G +D G H V + L T +
Sbjct: 381 MALQFFESLLRSGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACV 440
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+D+ A+ G +EA ++ + MKP D F+W S++GG HG ++ L + + ++P
Sbjct: 441 IDLLARSGRFKEAENIIDNMPMKP-DKFLWASLLGGCRIHGNIE--LAERAAKALFELEP 497
Query: 244 DE-ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+ TY+ L + A+ GL E + + G+ K
Sbjct: 498 ENPATYITLSNIYANAGLWTEETKVRNDMDNRGIVKK 534
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
P+P+ +++ AC L+ G+ +H + + +V+ L+ MYAKCG++ +A
Sbjct: 59 PQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISNRLIHMYAKCGSLVDAQ 118
Query: 198 HVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+F + D+ WN+MI G+A G ++++ LF EM D ++ ++S
Sbjct: 119 MLFDE--IPQKDLCSWNTMISGYANVGRIEQARKLFDEM----PHRDNFSWNAVIS---- 168
Query: 258 GGLVKEAWY 266
G V + WY
Sbjct: 169 -GYVSQGWY 176
>IMGA|Medtr1g046540.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 10866368-10870003 H
EGN_Mt090430 20090702
Length = 827
Score = 246 bits (629), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/383 (33%), Positives = 231/383 (60%), Gaps = 2/383 (0%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N++I Y+ A K+F+ +P +++ SWN+M+ G+ + GD++ A Q+F MP+++V+
Sbjct: 236 NAMIAGYAQNGRFDEALKLFERMPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMPQKNVI 295
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
+W+ ++ GYV+ G +EAL +F +M+ + G KP T V+VL AC+ L L +G+ +H
Sbjct: 296 TWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQIHQM 355
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ + + ++L++MY+KCG A +F GL D+ WN MI +A HG
Sbjct: 356 ISKTVFQESTYVVSALINMYSKCGDFHVAKKMFDDGLSGHMDLIAWNGMIAAYAHHGYGN 415
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNG-MTPKSEHYACM 286
E+++LF++M +G + +++TY+ LL+AC+H GL E + +FD L KN + + +HY C+
Sbjct: 416 EAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYTCL 475
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+D+ RAG++ EA + + + + S+ GALL GC HG D+ + V K++++EP
Sbjct: 476 IDLCGRAGRLDEALNIIEGLGKEVSLSLWGALLAGCSVHGNADIGKLVADKVLKMEPENA 535
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSE 406
Y+ SN+YA ++A ++R M++ G+KK PG S++++ + FV +DKSH E
Sbjct: 536 DTYLLASNMYASVGMREEAANVRMKMKKKGLKKQPGCSWIDVGNTVQVFVVNDKSHSQFE 595
Query: 407 QIYMMLGFIVSQMKHIVDYENQE 429
+ +L + ++MK D + +
Sbjct: 596 MLKYLLLDLHTKMKKNRDMSDDD 618
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/321 (25%), Positives = 157/321 (48%), Gaps = 28/321 (8%)
Query: 13 FPFLAKASACLLKRELGLAIH-GYITKAGYESDR-------FVSNSLIHMYSSFRDIPNA 64
F ++K +CL + I G I +A DR V +++ Y I A
Sbjct: 68 FDEMSKRDSCLWTTMISGYIKCGLINEARKLFDRPDAQKSVIVWTAMVSGYIKMNRIEEA 127
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
++F+ +PV+N+VSWN+M+DGYA+ G A +F MPE++V+SW+ ++ G D
Sbjct: 128 ERLFNEMPVRNVVSWNTMIDGYARNGRTQEALDLFGRMPERNVVSWNTVMTALAHCGRID 187
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL-TLVLRTSL 183
+A +F EMR + + V+ +++ + G +D R + +++P+ +V ++
Sbjct: 188 DAERLFNEMR----ERDVVSWTTMVAGLSKNGRVDAAREVF-----DKMPIRNVVSWNAM 238
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ YA+ G EAL +F M D+ WN+M+ GF +G + + LF M +
Sbjct: 239 IAGYAQNGRFDEALKLFER--MPERDMPSWNTMVTGFIQNGDLNRAEQLFHAMP----QK 292
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA--- 299
+ IT+ +++ GL +EA F+ + N G+ P + + ++ + + E
Sbjct: 293 NVITWTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTGTFVTVLGACSDLAGLPEGQQI 352
Query: 300 YQFLCQIPIQPTASMLGALLN 320
+Q + + Q + ++ AL+N
Sbjct: 353 HQMISKTVFQESTYVVSALIN 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 165/371 (44%), Gaps = 31/371 (8%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
+ H Y F++ R + N + + G ++ AR+VFD M ++D W
Sbjct: 20 ITHCYYPFQNNLRIRSSSTATLTSEMKRCNYFISKLCREGKVNEARKVFDEMSKRDSCLW 79
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ +I GY++ G +EA +F+ +P+ V V A G + R+ +
Sbjct: 80 TTMISGYIKCGLINEARKLFD-------RPDAQKSVIVWTAMVS-GYIKMNRIEEAERLF 131
Query: 171 NELPL-TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
NE+P+ +V +++D YA+ G QEAL +F G M +V WN+++ A G + ++
Sbjct: 132 NEMPVRNVVSWNTMIDGYARNGRTQEALDLF--GRMPERNVVSWNTVMTALAHCGRIDDA 189
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
LF+EM + D +++ +++ + G V A FD + + + M+
Sbjct: 190 ERLFNEMR----ERDVVSWTTMVAGLSKNGRVDAAREVFDKMPIRNVVS----WNAMIAG 241
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-R 348
A+ G+ EA + ++P + S ++ G + +G L+ AE +L P ++
Sbjct: 242 YAQNGRFDEALKLFERMPERDMPS-WNTMVTGFIQNGDLNRAE----QLFHAMPQKNVIT 296
Query: 349 YVGLSNVYAIFRRWDKARSMREAME-RMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQ 407
+ + Y ++A + M+ G+K + G +FV + GA P +Q
Sbjct: 297 WTAMMTGYVQHGLSEEALKLFNKMQANDGLKPTTG-TFVTVLGACSDLAG----LPEGQQ 351
Query: 408 IYMMLGFIVSQ 418
I+ M+ V Q
Sbjct: 352 IHQMISKTVFQ 362
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 104/223 (46%), Gaps = 35/223 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P TF + A + L G IH I+K ++ +V ++LI+MYS D A
Sbjct: 325 GLKPTTGTFVTVLGACSDLAGLPEGQQIHQMISKTVFQESTYVVSALINMYSKCGDFHVA 384
Query: 65 RKVF-DGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
+K+F DG+ +L++WN M+ YA G
Sbjct: 385 KKMFDDGLSGHMDLIAWNGMIAAYA-------------------------------HHGY 413
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRT 181
+EA+ +F +M+ G + N+VT V +L AC+H G D+G ++ N + + T
Sbjct: 414 GNEAINLFNKMQELGFQANDVTYVGLLTACSHAGLFDEGFKYFDELLKNRYIQVREDHYT 473
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
L+D+ + G + EAL++ GL K + +W +++ G + HG
Sbjct: 474 CLIDLCGRAGRLDEALNII-EGLGKEVSLSLWGALLAGCSVHG 515
>IMGA|Medtr8g077070.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 15273509-15270545 E
EGN_Mt090430 20090702
Length = 748
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 127/405 (31%), Positives = 222/405 (54%), Gaps = 34/405 (8%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TF + A ++ + G +H YI + Y+ + FV+++L+ MY
Sbjct: 274 DQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMY------------- 320
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
KC +I A VF M ++V+SW+ ++ GY + G +EA+
Sbjct: 321 ------------------CKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYSEEAVK 362
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
F +M+ G +P++ T+ SV+ +CA+L +L++G H + + L + + +LV +Y
Sbjct: 363 TFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYG 422
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KCG+I+++ +F K D W +++ G+A G E++ LF M G+KPD++T+
Sbjct: 423 KCGSIEDSHRLFNEISFK--DEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTF 480
Query: 249 LNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ +LSAC+ GLV++ F+ + ++G+ P +HY CM+D+ +RAG++ EA F+ ++P
Sbjct: 481 IGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFINKMP 540
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
P A LL+ C +G +D+ + L+EL+PH YV LS+VYA +W++
Sbjct: 541 FSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVAR 600
Query: 368 MREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+R+ M G++K PG S+++ +H F A DKS+P S+QIY L
Sbjct: 601 LRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSEL 645
Score = 176 bits (446), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/324 (30%), Positives = 181/324 (55%), Gaps = 8/324 (2%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
T LA C+ +LG IHG++ K G+ S FV + L+ MYS I ARKVFD +
Sbjct: 148 TLLILASKRGCV---KLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDEL 204
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P KN+V +N+++ G +CG + ++++F M E+D +SW+ +I G+ + G +A+ +F
Sbjct: 205 PEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFR 264
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM++ + ++ T SVL AC + AL +G+ +H Y+I + + + ++LVDMY KC
Sbjct: 265 EMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFVASALVDMYCKCK 324
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
I+ A VF+ M +V W +M+ G+ +G +E++ FS+M G++PD+ T ++
Sbjct: 325 NIKSAEAVFKK--MTCKNVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSV 382
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
+S+CA+ ++E F +G+ +V + + G + ++++ +I +
Sbjct: 383 ISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGSIEDSHRLFNEISFKDE 442
Query: 312 ASMLGALLNGCMNHGKLDLAETVG 335
+ AL++G GK + ET+G
Sbjct: 443 VTWT-ALVSGYAQFGKAN--ETIG 463
Score = 124 bits (311), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 131/261 (50%), Gaps = 33/261 (12%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
+H +I K + F+ N+LI Y+ IP A KVFD +P NL SWN++L Y+K G
Sbjct: 31 LHSHIIKTLPYPETFLLNNLISSYAKLGSIPYACKVFDQMPHPNLYSWNTILSAYSKLGR 90
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGP-KPNEVTMVSVL 149
+S +FD MP +D +SW+ LI GY G +++ + M + G N +T ++L
Sbjct: 91 VSEMEYLFDAMPRRDGVSWNSLISGYAGCGLIYQSVKAYNLMLKNDGSFNLNRITFSTLL 150
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF--------- 200
+ G + GR +H +V+ + + + LVDMY+K G I A VF
Sbjct: 151 ILASKRGCVKLGRQIHGHVVKFGFMSYVFVGSPLVDMYSKMGMISCARKVFDELPEKNVV 210
Query: 201 ----------RSGL----------MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
R G M+ D W SMI GF +GL ++++D+F EM +
Sbjct: 211 MYNTLIMGLMRCGRVEDSKRLFFEMRERDSISWTSMITGFTQNGLDRDAIDIFREMKLEN 270
Query: 241 VKPDEITYLNLLSACAHGGLV 261
++ D+ T+ ++L+AC GG++
Sbjct: 271 LQMDQYTFGSVLTAC--GGVM 289
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 35/226 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ PD T + + A L E G H +G S VSN+L+ +Y
Sbjct: 367 MQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNALVTLYGKCGS 426
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I ++ ++F+ I K+ V+W +++ GYA+ G
Sbjct: 427 IEDSHRLFNEISFKDEVTWTALVSGYAQFGKA---------------------------- 458
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+E + +FE M G KP++VT + VL AC+ G ++KG + +I NE + +
Sbjct: 459 ---NETIGLFESMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMI-NEHGIVPIQD 514
Query: 181 --TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
T ++D++++ G I+EA + P D W +++ +G
Sbjct: 515 HYTCMIDLFSRAGRIEEARNFINKMPFSP-DAISWATLLSSCRFYG 559
>IMGA|Medtr5g095400.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 37806481-37809070 E
EGN_Mt090430 20090702
Length = 684
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 142/417 (34%), Positives = 225/417 (53%), Gaps = 38/417 (9%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +TF A +++ LG +H +I + GY+ D V+N LI
Sbjct: 207 PNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLI--------------- 251
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLM-PEQDVLSWSCLIDGYVRKGDYDEA 126
D Y KCGDI A VF+ + ++V+SW ++ V+ + + A
Sbjct: 252 ----------------DFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERA 295
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
VF + R +P + + SVL ACA LG L+ GR +H + + + + ++LVDM
Sbjct: 296 CMVFLQAR-KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDM 354
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV--GVKPD 244
Y KCG+I+ A VF + ++ WN+MIGG+A G + +L LF EM + G++P
Sbjct: 355 YGKCGSIENAEQVFSE--LPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPS 412
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T +++LS C+ G V+ F+ + N G+ P +EH+AC+VD++ R+G V AY+F+
Sbjct: 413 YVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFI 472
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+ IQPT S+ GALL C HGK +L + KL EL+ G +V LSN+ A RW+
Sbjct: 473 QNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWE 532
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+A +R+ M+ +G+KK+ GYS++ + +H F A D SH + +I MLG + MK
Sbjct: 533 EATVVRKEMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMK 589
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 142/339 (41%), Gaps = 50/339 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMY--SSF 58
M R V P+ TFP + KASA + G IHG K G D FV S MY + F
Sbjct: 99 MRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTGF 158
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
R GD A +FD MP++++ +W+ I V
Sbjct: 159 R------------------------------GD---ACNMFDEMPQRNLATWNAYISNAV 185
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+ +A+ F+E +PN +T + L AC + L+ GR +H +++ +
Sbjct: 186 QDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDVS 245
Query: 179 LRTSLVDMYAKCGAIQEALHVF-RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ L+D Y KCG I A VF R G K +V W SM+ + + + +F +
Sbjct: 246 VANGLIDFYGKCGDIVSAEMVFNRIGNRK--NVVSWCSMLAALVQNHEEERACMVFLQAR 303
Query: 238 IVGVKPDEITYLNLLSACAH-GGL----VKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
V+P + ++LSACA GGL A C+ N + +VD+ +
Sbjct: 304 -KEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSA-----LVDMYGK 357
Query: 293 AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
G + A Q ++P + A++ G + G +D+A
Sbjct: 358 CGSIENAEQVFSELP-ERNLVTWNAMIGGYAHQGDIDMA 395
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 106/225 (47%), Gaps = 35/225 (15%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R V P + A A L ELG ++H KA E + FV ++L+ MY I
Sbjct: 303 RKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCGSIE 362
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
NA +VF +P +NLV+WN+M+ GYA GDI M
Sbjct: 363 NAEQVFSELPERNLVTWNAMIGGYAHQGDIDM---------------------------- 394
Query: 123 YDEALAVFEEMRVS--GPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVL 179
AL +FEEM + G +P+ VT++S+L C+ +GA+++G ++ ++ +
Sbjct: 395 ---ALRLFEEMTLGSHGIRPSYVTLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEH 451
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+VD+ + G + A ++ ++P+ + +W +++G HG
Sbjct: 452 FACVVDLLGRSGLVDRAYEFIQNMAIQPT-ISVWGALLGACRMHG 495
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 121/297 (40%), Gaps = 37/297 (12%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P+ + +S N +++ Y+K ++ A+ V L + V++W+ LI G V + AL F
Sbjct: 39 PLPSFLS-NHLVNMYSKLDLLNSAQHVLSLTHLRTVVTWTSLISGCVHNRRFLPALLHFT 97
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
MR +PN+ T V A A + G+ +H + + + + S DMY K G
Sbjct: 98 NMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDVFVGCSCFDMYCKTG 157
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+A ++F M ++ WN+ I +++ F E V +P+ IT+
Sbjct: 158 FRGDACNMFDE--MPQRNLATWNAYISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAF 215
Query: 252 LSACA-----------HGGLVKEAWY--------FFDCLGKNGMTPKSE----------- 281
L+AC H +V+ + D GK G +E
Sbjct: 216 LNACVDMVRLNLGRQLHAFIVRCGYKEDVSVANGLIDFYGKCGDIVSAEMVFNRIGNRKN 275
Query: 282 --HYACMVDVMARAGQVAEAYQFLCQI--PIQPTASMLGALLNGCMNHGKLDLAETV 334
+ M+ + + + A Q ++PT M+ ++L+ C G L+L +V
Sbjct: 276 VVSWCSMLAALVQNHEEERACMVFLQARKEVEPTDFMISSVLSACAELGGLELGRSV 332
>IMGA|Medtr1g087400.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 17618322-17620205 H
EGN_Mt090430 20090702
Length = 627
Score = 246 bits (628), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 132/342 (38%), Positives = 197/342 (57%), Gaps = 3/342 (0%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGP 138
+S++D Y++ + ++R+VFD M +++ W+ +I+GYV+ G + AL +F EM R
Sbjct: 276 SSLIDMYSRSNKLVLSRRVFDQMKSRNIYVWTAMINGYVQNGAPEGALILFREMQRKDRI 335
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
+PN V++VSVL AC L L G+ +H + I E + LR +L+DMYAKCG++ A
Sbjct: 336 RPNRVSLVSVLPACGLLVGLMGGKQVHAFSIKMEFNDYISLRNALIDMYAKCGSLDYARR 395
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF +G D W+S+I + HG +E+L + EM G+KPD IT + +LSAC
Sbjct: 396 VFDNG-SYSKDAITWSSIISAYGLHGKGQEALTTYYEMLQQGIKPDMITVVGVLSACCRS 454
Query: 259 GLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
GLV E ++ L M P E C+VD++ R+GQ+ +A F+ ++PI P S+ G+
Sbjct: 455 GLVDEGISIYNSLTTEYEMKPSVEICGCVVDLLGRSGQLDQALDFIREMPIIPGPSVWGS 514
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
LL + HG + R L+ELEP Y+ LSN YA RRWD+ +R M+ G+
Sbjct: 515 LLTASVIHGNSMTRDLAYRCLLELEPENPSNYISLSNTYASSRRWDEITEVRSMMKERGL 574
Query: 378 KKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
+K PG S++ + H F DK HPSS IY ML +VS M
Sbjct: 575 RKVPGISWITISDKNHFFTVADKVHPSSSSIYEMLDDLVSIM 616
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 122/262 (46%), Gaps = 44/262 (16%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
+ PD T ++K S + LG IHG + G+ SD V NS++ MY
Sbjct: 122 LLPDDYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMY---------- 171
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+C + A +VFD MP+++V S++ +I G G+ D
Sbjct: 172 ---------------------IRCREFGDAMKVFDEMPQRNVGSFNVIISGCAALGNLDY 210
Query: 126 AL-----AVFEEMRVSGPKPNEVTMVSVLCACAHL-GALDKGRMMHHYVIDNELPLTLV- 178
+L F M+ G + T+ S+L C G D GR +H Y++ N L L +
Sbjct: 211 SLYADLWNFFRRMQCQGYNADAFTVASLLPMCCDSDGKFDHGRELHCYLVKNGLDLKMCS 270
Query: 179 ---LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+ +SL+DMY++ + + VF MK ++++W +MI G+ +G + +L LF E
Sbjct: 271 DVHMGSSLIDMYSRSNKLVLSRRVFDQ--MKSRNIYVWTAMINGYVQNGAPEGALILFRE 328
Query: 236 MHIVG-VKPDEITYLNLLSACA 256
M ++P+ ++ +++L AC
Sbjct: 329 MQRKDRIRPNRVSLVSVLPACG 350
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/267 (24%), Positives = 127/267 (47%), Gaps = 14/267 (5%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++ YA GD M++ VFD + ++V W+ LI+GYV+ +D A+ +F +M P+
Sbjct: 67 LISAYATFGDSIMSKLVFDSVHTKNVYLWNSLINGYVKNHQFDNAIVLFRQMG-RCLLPD 125
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
+ T+ ++ + L G+++H + +V+ S++ MY +C +A+ VF
Sbjct: 126 DYTLATISKVSGEIQDLVLGKLIHGKSLRIGFVSDIVVGNSVMSMYIRCREFGDAMKVFD 185
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESL-----DLFSEMHIVGVKPDEITYLNLLSACA 256
M +V +N +I G A G + SL + F M G D T +LL C
Sbjct: 186 E--MPQRNVGSFNVIISGCAALGNLDYSLYADLWNFFRRMQCQGYNADAFTVASLLPMCC 243
Query: 257 HGGLVKEAWYFFDC-LGKNGMTPK--SEHY--ACMVDVMARAGQVAEAYQFLCQIPIQPT 311
+ C L KNG+ K S+ + + ++D+ +R+ ++ + + Q+ +
Sbjct: 244 DSDGKFDHGRELHCYLVKNGLDLKMCSDVHMGSSLIDMYSRSNKLVLSRRVFDQMKSR-N 302
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKL 338
+ A++NG + +G + A + R++
Sbjct: 303 IYVWTAMINGYVQNGAPEGALILFREM 329
>IMGA|AC235092_12.1 Aldo/keto reductase AC235092.1 69694-72297 H
EGN_Mt090430 20090702
Length = 867
Score = 246 bits (627), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 139/438 (31%), Positives = 226/438 (51%), Gaps = 39/438 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV P+H T+ + + E+ H + K YE V +L
Sbjct: 388 MRREGVKPNHFTYSAILTVHYPVFVSEM----HAEVIKTNYERSSSVGTAL--------- 434
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y K G+ A +VF+++ +D+++WS ++ GY +
Sbjct: 435 ----------------------LDAYVKLGNTIDAVKVFEIIEAKDLMAWSAMLAGYAQT 472
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH-LGALDKGRMMHHYVIDNELPLTLVL 179
G+ +EA +F ++ G KPNE T SV+ ACA A ++G+ H Y I L L +
Sbjct: 473 GETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAIKMRLNNALCV 532
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++LV MYAK G I A VF+ K D+ WNSMI G++ HG K++L++F EM
Sbjct: 533 SSALVTMYAKRGNIDSAHEVFKR--QKERDLVSWNSMISGYSQHGQAKKALEVFDEMQKR 590
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ D +T++ +++AC H GLV++ +F+ + + + P +HY+CM+D+ +RAG + +
Sbjct: 591 NMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLYSRAGMLEK 650
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + ++P P A++ LL H ++L E KLI L+P YV LSN+YA
Sbjct: 651 AMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYVLLSNMYAA 710
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W + ++R+ M++ VKK PGYS++E+ + F+A D +HP S QIY L + +
Sbjct: 711 AGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYSKLSELSIR 770
Query: 419 MKHIVDYENQEYYFYDNE 436
+K + + F+D E
Sbjct: 771 LKDAGYQPDTKNVFHDIE 788
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 130/256 (50%), Gaps = 10/256 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
S++D Y K +++ R+VFD M E++V+SW+ L+ GY G Y +F +M+ G
Sbjct: 132 TSLVDMYMKTENVNDGRRVFDEMGERNVVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVL 191
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN T+ +V+ A + G + G +H V+ + + + SL+ +Y++ G +++A V
Sbjct: 192 PNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFEEAIPVFNSLISLYSRLGMLRDARDV 251
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA--- 256
F M+ D WNSMI G+ +G E ++F++M + GVKP +T+ +++ +CA
Sbjct: 252 FDK--MEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAGVKPTHMTFASVIKSCASLR 309
Query: 257 HGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
LVK C K+G T ++ +++ ++ +A +
Sbjct: 310 ELALVK----LMQCKALKSGFTTDQIVITALMVALSKCKEMDDALSLFSLMEEGKNVVSW 365
Query: 316 GALLNGCMNHGKLDLA 331
A+++GC+ +G D A
Sbjct: 366 TAMISGCLQNGGNDQA 381
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 87/348 (25%), Positives = 154/348 (44%), Gaps = 62/348 (17%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ T + A +GL +H + K G+E
Sbjct: 189 GVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHGFE---------------------- 226
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+ IPV +NS++ Y++ G + AR VFD M +D ++W+ +I GYVR G
Sbjct: 227 ----EAIPV-----FNSLISLYSRLGMLRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDL 277
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E +F +M+++G KP +T SV+ +CA L L ++M + + ++ T+L+
Sbjct: 278 EVFEIFNKMQLAGVKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALM 337
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+KC + +AL +F S + + +V W +MI G +G ++++LFS+M GVKP+
Sbjct: 338 VALSKCKEMDDALSLF-SLMEEGKNVVSWTAMISGCLQNGGNDQAVNLFSQMRREGVKPN 396
Query: 245 EITYLNLLS-------ACAHGGLVKEAW--------YFFDCLGKNGMTPKSEH------- 282
TY +L+ + H ++K + D K G T +
Sbjct: 397 HFTYSAILTVHYPVFVSEMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEA 456
Query: 283 -----YACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGC 322
++ M+ A+ G+ EA + Q+ I+P +++N C
Sbjct: 457 KDLMAWSAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINAC 504
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 102/220 (46%), Gaps = 8/220 (3%)
Query: 94 MARQVFDLMPEQDVL--SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+A +FD +P + + L+ Y R EAL +F + S +P+E T+ V
Sbjct: 43 IAHNLFDKIPHRPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNI 102
Query: 152 CAHLGALDK--GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
CA G+LD GR +H + L + + TSLVDMY K + + VF M +
Sbjct: 103 CA--GSLDGKLGRQVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDE--MGERN 158
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V W S++ G++ +GL +LF +M GV P+ T +++A + G+V
Sbjct: 159 VVSWTSLLAGYSWNGLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHA 218
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+ K+G + ++ + +R G + +A ++ I+
Sbjct: 219 MVVKHGFEEAIPVFNSLISLYSRLGMLRDARDVFDKMEIR 258
>IMGA|Medtr7g015730.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 4028933-4023938 E
EGN_Mt090430 20090702
Length = 881
Score = 244 bits (623), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 132/421 (31%), Positives = 224/421 (53%), Gaps = 34/421 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR + PD TF + KA A G+ +HG + K+G D FV +++I MY
Sbjct: 464 MLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMY----- 518
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + A ++ + + E+ +SW+ +I G+ +
Sbjct: 519 --------------------------CKCGMLVEAEKIHERLEERTTVSWNSIISGFSSE 552
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ AL+ F M G P+ T +VL CA+L ++ G+ +H ++ +L + +
Sbjct: 553 KQGENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIA 612
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++VDMY+KCG +Q++ +F + D W++MI +A HGL ++++ LF EM +
Sbjct: 613 STIVDMYSKCGNMQDSRIMFEKAPKR--DYVTWSAMICAYAYHGLGEDAIKLFEEMQLQN 670
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
VKP+ ++++L ACAH G V + ++F + + G+ P+ EHY+CMVD++ R+GQV EA
Sbjct: 671 VKPNHTIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEA 730
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + +P + + LL C G +++AE L++L+P YV LSNVYAI
Sbjct: 731 LELIESMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIA 790
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
W + +R M+ +KK PG S++++ +H F+ DK+HP SE+IY +V +M
Sbjct: 791 GMWGEVAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEM 850
Query: 420 K 420
K
Sbjct: 851 K 851
Score = 128 bits (322), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 127/246 (51%), Gaps = 2/246 (0%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
LTF + + + L G H IT G+ FVSN L+ Y ++ A VFD
Sbjct: 39 LTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDK 98
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
+P ++++SWN+M+ GYA G++ A+ +FD MPE+DV+SW+ ++ Y++ G + +++ +F
Sbjct: 99 MPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIF 158
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+MR+ + + T VL AC + G +H I +V T+LVDMY+ C
Sbjct: 159 TKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYSTC 218
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
+ A ++F M + W+++I G+ + E L L+ M G+ + T+ +
Sbjct: 219 KKLDHAFNIFCE--MPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFAS 276
Query: 251 LLSACA 256
+CA
Sbjct: 277 AFRSCA 282
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 107/198 (54%), Gaps = 7/198 (3%)
Query: 70 GIPVK-----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
G+ VK N+ N++LD YAKCG + A +FD M +D +SW+ +I + + +
Sbjct: 396 GLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEHVE 455
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
E LA+F M S +P++ T SV+ ACA AL+ G +H VI + + L + ++++
Sbjct: 456 ETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAII 515
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMY KCG + EA + ++ WNS+I GF+ + +L FS M VGV PD
Sbjct: 516 DMYCKCGMLVEAEKIHER--LEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPD 573
Query: 245 EITYLNLLSACAHGGLVK 262
TY +L CA+ V+
Sbjct: 574 NFTYATVLDICANLATVE 591
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 182/432 (42%), Gaps = 74/432 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ TF ++ A L ELG +H Y K + D V + + MY+
Sbjct: 262 MLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCDR 321
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +ARKVF+ P S N+++ GYA R+
Sbjct: 322 MVDARKVFNTFPNPTRQSHNALIVGYA-------------------------------RQ 350
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL +F ++ S +E+++ L AC+ + +G +H + L + +
Sbjct: 351 DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVA 410
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+++DMYAKCGA+ EA +F M+ D WN++I + V+E+L LF M
Sbjct: 411 NTILDMYAKCGALMEACLIFDD--MEIKDAVSWNAIIAAHEQNEHVEETLALFVSMLRST 468
Query: 241 VKPDEITYLNLLSACA-----------HGGLVKEA----WY----FFDCLGKNGMTPKSE 281
++PD+ T+ +++ ACA HG ++K W+ D K GM ++E
Sbjct: 469 MEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAE 528
Query: 282 H------------YACMVDVMARAGQVAEAYQF---LCQIPIQPTASMLGALLNGCMNHG 326
+ ++ + Q A + + Q+ + P +L+ C N
Sbjct: 529 KIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPDNFTYATVLDICANLA 588
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
++L + + ++++L+ H D Y+ + I + K +M+++ R+ +K+P +V
Sbjct: 589 TVELGKQIHGQILKLQLHSD-VYIAST----IVDMYSKCGNMQDS--RIMFEKAPKRDYV 641
Query: 387 EMHGALHRFVAH 398
+ + H
Sbjct: 642 TWSAMICAYAYH 653
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 133/316 (42%), Gaps = 55/316 (17%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D+ TF + KA + LGL +H + G++SD +L+ MYS+
Sbjct: 169 DYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSDVVTGTALVDMYST----------- 217
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
C + A +F MPE++ + WS +I GYVR + E L
Sbjct: 218 --------------------CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLK 257
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+++ M G ++ T S +CA L A + G +H Y + ++ T+ +DMYA
Sbjct: 258 LYKVMLDEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYA 317
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
KC + +A VF + P+ N++I G+A V E+L++F + + DEI+
Sbjct: 318 KCDRMVDARKVFNT-FPNPTRQ-SHNALIVGYARQDQVLEALEIFRSLQKSYLDFDEISL 375
Query: 249 LNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
L+AC+ HG VK F C+ ++D+ A+ G +
Sbjct: 376 SGALTACSAIKGYLEGIQLHGLAVKCGLDFNICVANT-----------ILDMYAKCGALM 424
Query: 298 EAYQFLCQIPIQPTAS 313
EA + I+ S
Sbjct: 425 EACLIFDDMEIKDAVS 440
>IMGA|Medtr1g013720.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 2624082-2625230 H
EGN_Mt090430 20090702
Length = 382
Score = 244 bits (622), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 123/320 (38%), Positives = 196/320 (61%), Gaps = 15/320 (4%)
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M+V G P+E+TMVSVL ACA LGAL+ G+ + YV +P ++ L +L+DM+AKCG
Sbjct: 1 MQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEKKNIPKSVELCNALIDMFAKCGN 60
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+ +A+ +FR M + W S+I G A HG +++ LF EM G+ PD++ ++ +L
Sbjct: 61 VDKAIKLFRQ--MDSRTIVSWTSVIAGLAMHGRGLDAVSLFDEMVENGITPDDVAFIGVL 118
Query: 253 SACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPT 311
SAC+H GLV + Y+F + +N + PK EHY CMVD++ R G V EA++F+ ++P +P
Sbjct: 119 SACSHSGLVDKGRYYFGSMERNFSIVPKVEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPN 178
Query: 312 ASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA 371
+ ++ C G+L L E++ ++LI+ EP + YV LSN+YA R+W+K +RE
Sbjct: 179 QIIWRTIITACHATGELKLGESISKELIKSEPMHESNYVLLSNIYAKLRQWEKKTKVREM 238
Query: 372 MERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML----------GFI--VSQM 419
M+ G+KK PG + +E++ ++ FVA DKSH ++IY M+ G++ SQ+
Sbjct: 239 MDMRGMKKVPGSTMIEVNNEMYEFVAGDKSHDQYKEIYEMVDEMGREIKKAGYVPTTSQV 298
Query: 420 KHIVDYENQEYYFYDNEGKL 439
+D E++E Y + KL
Sbjct: 299 LLDIDEEDKEDALYRHSEKL 318
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 111/228 (48%), Gaps = 41/228 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +GV PD +T + A A L ELG + Y+ K ++
Sbjct: 1 MQVMGVCPDEITMVSVLSACADLGALELGKWVESYVEK--------------------KN 40
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
IP K++ N+++D +AKCG++ A ++F M + ++SW+ +I G
Sbjct: 41 IP-----------KSVELCNALIDMFAKCGNVDKAIKLFRQMDSRTIVSWTSVIAGLAMH 89
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +A+++F+EM +G P++V + VL AC+H G +DKGR +Y E ++V +
Sbjct: 90 GRGLDAVSLFDEMVENGITPDDVAFIGVLSACSHSGLVDKGR---YYFGSMERNFSIVPK 146
Query: 181 TS----LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+VD+ + G ++EA + +P+ + IW ++I ACH
Sbjct: 147 VEHYGCMVDLLCRGGFVKEAFEFVQKMPFEPNQI-IWRTIIT--ACHA 191
>IMGA|Medtr5g101670.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 40689750-40687474 H
EGN_Mt090430 20090702
Length = 758
Score = 244 bits (622), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/322 (36%), Positives = 196/322 (60%), Gaps = 4/322 (1%)
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
V G + + NS+++ Y KC ++++ ++F+ E+DV+ W+ LI ++ Y+E
Sbjct: 440 NVIKGFVDETISVTNSLIEMYGKCDKMNVSWRIFN-RSERDVILWNALISAHIHVKHYEE 498
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A+++F+ M + PN T+V VL AC+HL L+KG +H Y+ + L L L T+LVD
Sbjct: 499 AISLFDIMIMEDQNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVD 558
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAKCG ++++ VF S M DV WN+MI G+ +G + ++++F+ M VKP+E
Sbjct: 559 MYAKCGQLEKSREVFDS--MMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNVKPNE 616
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
IT+L+LLSACAH GLV+E F + + P +HY CMVD++ R+ + EA + +
Sbjct: 617 ITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCMVDLLGRSCNLEEAEELVLS 676
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+PI P + GALL+ C H ++++ +G+ I+ EP DG Y+ ++N+Y+ RWD+A
Sbjct: 677 MPIPPDGGVWGALLSACKTHNQIEMGIRIGKNAIDSEPENDGYYIMVANMYSSIGRWDEA 736
Query: 366 RSMREAM-ERMGVKKSPGYSFV 386
++R M +R + K G+S V
Sbjct: 737 ENVRRTMKDRCSMGKKAGWSMV 758
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 122/250 (48%), Gaps = 31/250 (12%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFRDIPNA 64
V P+H TFP +A + A + G+ +H K G+ + V +S + +YS ++ +A
Sbjct: 105 VLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSAVGSSFVSLYSRCDEMNDA 164
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KVFD IPV+++V+W +++ GY + G+ M + C+ + Y R GD
Sbjct: 165 VKVFDEIPVRDVVAWTALVIGYVQNGESEMGLE--------------CISEMY-RVGDDS 209
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ KPN T+ AC +LG L GR +H V+ N + L +++S++
Sbjct: 210 Q-------------KPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVL 256
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY KCG +EA F + K D+ W SMI +A G++ + + F EM V PD
Sbjct: 257 SMYCKCGVPREAYQSFSEVINK--DLLSWTSMIRVYARFGMMSDCVRFFWEMLENQVCPD 314
Query: 245 EITYLNLLSA 254
+ +LS
Sbjct: 315 GMVIGCILSG 324
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 35/301 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V PD + + + G A HG I + Y D V NSL+ MY F
Sbjct: 306 MLENQVCPDGMVIGCILSGFGNSVDVYGGKAFHGLIIRRHYAPDEMVDNSLLSMYCKF-- 363
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G +S A ++F + + W+ +I GY R
Sbjct: 364 -----------------------------GMLSFAERLFQ-RSQGSIEYWNFMIVGYGRI 393
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + + +F EM+ G + V +VS + +C LG ++ GR +H VI + T+ +
Sbjct: 394 GKNVKCIQLFREMQYLGIRSESVGIVSAIASCGQLGEINLGRSIHCNVIKGFVDETISVT 453
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL++MY KC + + +F DV +WN++I +E++ LF M +
Sbjct: 454 NSLIEMYGKCDKMNVSWRIFNR---SERDVILWNALISAHIHVKHYEEAISLFDIMIMED 510
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
P+ T + +LSAC+H +++ + + G +VD+ A+ GQ+ ++
Sbjct: 511 QNPNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSR 570
Query: 301 Q 301
+
Sbjct: 571 E 571
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 102/220 (46%), Gaps = 32/220 (14%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ T + A + L E G +H YI + G++ + + +L+ MY+ + +R+V
Sbjct: 513 PNTATLVVVLSACSHLAFLEKGERLHRYINEKGFKLNLPLGTALVDMYAKCGQLEKSREV 572
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
FD + K+++ WN+M+ GY G A ++F+LM E +V
Sbjct: 573 FDSMMEKDVICWNAMISGYGMNGYAESAIEIFNLMEESNV-------------------- 612
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
KPNE+T +S+L ACAH G +++G+ + + + L T +VD+
Sbjct: 613 -----------KPNEITFLSLLSACAHAGLVEEGKNVFAKMQSYSVKPNLKHYTCMVDLL 661
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ ++EA + S + P D +W +++ H ++
Sbjct: 662 GRSCNLEEAEELVLS-MPIPPDGGVWGALLSACKTHNQIE 700
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/311 (20%), Positives = 117/311 (37%), Gaps = 41/311 (13%)
Query: 1 MLRVGVFP-DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+R+ + DH L+K L L H G ++ F++ LI +Y +
Sbjct: 1 MMRISMLKLDHGELISLSKRITTLQSL---LPFHAVTVTTGNSTNPFIAAKLISLYDTLN 57
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
++ +F +P K D W+ +
Sbjct: 58 HPTSSSTLFHSLPFK-------------------------------DTFLWNSFLKTLFS 86
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLV 178
+ Y + L+ + MR PN T V + AH + G +H P
Sbjct: 87 RSLYPQFLSFYSLMRSENVLPNHFTFPMVASSYAHFMMIRSGMNLHALACKVGFFPENSA 146
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +S V +Y++C + +A+ VF + DV W +++ G+ +G + L+ SEM+
Sbjct: 147 VGSSFVSLYSRCDEMNDAVKVFDE--IPVRDVVAWTALVIGYVQNGESEMGLECISEMYR 204
Query: 239 VG---VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
VG KP+ T AC + G + + KNG+ + + ++ + + G
Sbjct: 205 VGDDSQKPNARTLEGGFLACGNLGDLVSGRCLHGLVVKNGIGCLLDIQSSVLSMYCKCGV 264
Query: 296 VAEAYQFLCQI 306
EAYQ ++
Sbjct: 265 PREAYQSFSEV 275
>IMGA|Medtr4g159620.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 40306312-40307875 E
EGN_Mt090430 20090702
Length = 447
Score = 243 bits (620), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 142/391 (36%), Positives = 207/391 (52%), Gaps = 40/391 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR GV PD T P + KA + +LG +H Y K G +S+ + + I++Y
Sbjct: 88 MLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSYGIKLGLQSNEYCESGFINLY----- 142
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
K GD A +VFD E + SW+ LI G +
Sbjct: 143 --------------------------CKAGDFDSAHKVFDENHEPKLGSWNALISGLSQG 176
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID---NELPLTL 177
G +A+ VF +M+ G +P+ +TMVSV+ AC +G L +H YV NE + L
Sbjct: 177 GLAMDAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDLYLALQLHKYVFQAKTNEWTVIL 236
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ SL+DMY KCG + A VF + M+ +V W SMI G+A HG KE+L F M
Sbjct: 237 -MSNSLIDMYGKCGRMDLAYEVFAT--MEDRNVSSWTSMIVGYAMHGHAKEALGCFHCMR 293
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN--GMTPKSEHYACMVDVMARAGQ 295
GVKP+ +T++ +LSAC HGG V+E ++FD + KN G+TP+ +HY CMVD++ RAG
Sbjct: 294 ESGVKPNYVTFIGVLSACVHGGTVQEGRFYFDMM-KNIYGITPQLQHYGCMVDLLGRAGL 352
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+A + + ++P++P + + G L+ C HG +D+AE V L LEP +G YV LSN+
Sbjct: 353 FDDARRMVEEMPMKPNSVVWGCLMGACEKHGNVDMAEWVAENLQALEPWNEGVYVVLSNI 412
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
YA W + +R M+ + K P YS
Sbjct: 413 YANKGLWKEVERIRSFMKEGRLAKIPAYSIT 443
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 13/225 (5%)
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
+W+ +I Y R AL ++ M +G P+ T+ VL A + A+ G+ +H Y
Sbjct: 63 FNWNNIIRSYTRLESPQNALRIYVSMLRAGVLPDRYTLPIVLKAVSQSFAIQLGQQVHSY 122
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
I L + +++Y K G A VF + WN++I G + GL
Sbjct: 123 GIKLGLQSNEYCESGFINLYCKAGDFDSAHKVFDEN--HEPKLGSWNALISGLSQGGLAM 180
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC-- 285
+++ +F +M G +PD IT ++++SAC G + Y L K K+ +
Sbjct: 181 DAIVVFVDMKRHGFEPDGITMVSVMSACGSIGDL----YLALQLHKYVFQAKTNEWTVIL 236
Query: 286 ----MVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
++D+ + G++ AY+ + + +S ++ M HG
Sbjct: 237 MSNSLIDMYGKCGRMDLAYEVFATMEDRNVSSWTSMIVGYAM-HG 280
>IMGA|Medtr4g013250.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 2524453-2520314 E
EGN_Mt090430 20090702
Length = 673
Score = 240 bits (613), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 132/424 (31%), Positives = 218/424 (51%), Gaps = 35/424 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P+ +T + +A AC+ E G+ IH G+E + VS +L
Sbjct: 271 MLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTAL--------- 321
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+D Y KC A +F+ MP++DV++W+ L GY
Sbjct: 322 ----------------------MDMYMKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADN 359
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G E++ VF M SG +P+ + +V +L + LG L + +H +VI N +
Sbjct: 360 GMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIG 419
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIV 239
SL+++YAKC +I++A VF+ M DV W+S+I + HG +E+L LF +M +
Sbjct: 420 ASLIEVYAKCSSIEDANKVFKG--MTYKDVVTWSSIIAAYGFHGQGEEALKLFYQMANHS 477
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAE 298
KP+ +T++++LSAC+H GL+KE FD + K + P SEHYA MVD++ R G++
Sbjct: 478 DTKPNNVTFISILSACSHSGLIKEGINMFDIMVNKYKLKPNSEHYAIMVDLLGRMGELDM 537
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + +P+Q + GALL C H + + E + L L+P+ G Y+ LSN+Y++
Sbjct: 538 ALDVINNMPMQAGPDIWGALLGACRIHQNIKMGEVAAKNLFSLDPNHAGYYILLSNIYSV 597
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
W A +R ++ + K G S VE+ + F+A D+ H S+ IY +L + ++
Sbjct: 598 DENWHSATKLRRLVKEKRLNKIVGQSVVELKNEVRSFIAGDRIHDESDHIYEILTKLHAK 657
Query: 419 MKHI 422
M+ +
Sbjct: 658 MREV 661
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 33/294 (11%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD +T +A A A L +LG ++HG++ + G ++ ++NSL+H+Y I NA
Sbjct: 175 VSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNAS 234
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+F + K+++SW++M+ YA G E DVL
Sbjct: 235 NLFREMSDKDIISWSTMVACYADNG------------AETDVLD---------------- 266
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+F EM KPN VT+VSVL ACA + L++G +H ++ + + T+L+D
Sbjct: 267 ---LFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMD 323
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KC + ++A+ +F M DV W + G+A +G+V ES+ +F M G +PD
Sbjct: 324 MYMKCFSPEKAVDLFNR--MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDA 381
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
I + +L+ + G++++A + KNG A +++V A+ + +A
Sbjct: 382 IALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 435
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 126/250 (50%), Gaps = 34/250 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ + K+ A L K LG IHG++ K + D FV ++LI
Sbjct: 75 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALI--------------- 119
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
D Y KCG ++ A +VF P+ DV+ W+ +I GY + G + AL
Sbjct: 120 ----------------DLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELAL 163
Query: 128 AVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
A F M VS P+ VT+VSV ACA L GR +H +V L L L SL+ +
Sbjct: 164 AFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHL 223
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y K G+I+ A ++FR M D+ W++M+ +A +G + LDLF+EM +KP+ +
Sbjct: 224 YGKTGSIKNASNLFRE--MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWV 281
Query: 247 TYLNLLSACA 256
T +++L ACA
Sbjct: 282 TVVSVLRACA 291
Score = 84.7 bits (208), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 8/186 (4%)
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR-VS 136
S++ ++ + I A ++F P + V W+ L+ Y +G++ E L++F +M VS
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 137 G----PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
+P+ ++ L +CA L L G+++H ++ + + + ++L+D+Y KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNL 251
+ +A+ VF KP DV +W S+I G+ G + +L FS M + V PD +T +++
Sbjct: 128 MNDAVKVFME-YPKP-DVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 185
Query: 252 LSACAH 257
SACA
Sbjct: 186 ASACAQ 191
>IMGA|Medtr8g088980.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 19023608-19018958 E
EGN_Mt090430 20090702
Length = 510
Score = 240 bits (612), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 136/412 (33%), Positives = 219/412 (53%), Gaps = 39/412 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
G P+ T+PF+ KA C +R+ G IHG + K G E D FV N+ + Y
Sbjct: 115 GAAPNRYTYPFVLKA--CGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFY------- 165
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
AKC +I +R+VFD M E+D++SW+ ++ GY+ G
Sbjct: 166 ------------------------AKCKEIEASRKVFDEMLERDIVSWNSMMSGYIANGY 201
Query: 123 YDEALAVFEEM-RVSGPK-PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
DEA+ +F +M R G P+ T+V+VL A A + G +H Y++ + L +
Sbjct: 202 VDEAVMLFCDMLRDDGIGFPDNATLVTVLPAFAEKADIHAGYWIHCYIVKTGMKLDPAVG 261
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L+ +Y+ CG I+ A VF + +V +W+++I + HG +E+L +F ++ +G
Sbjct: 262 CGLITLYSNCGYIRMAKAVFDQ--IPDRNVIVWSAIIRCYGMHGFAQEALSMFRQLVELG 319
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ D I +L+LLSAC+H G+ +E W+ F + G+ HYACMVD++ RAG + +A
Sbjct: 320 LHLDGIVFLSLLSACSHAGMHEEGWHLFQTMETYGVVKGEAHYACMVDLLGRAGNLEKAM 379
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ + +PIQP ++ GALL H ++LAE KL L+P+ GRYV L+ +Y
Sbjct: 380 ELIQSMPIQPGKNVYGALLGASRIHKNIELAELAAEKLFVLDPNNAGRYVILAQMYEDEG 439
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
RW A +R+ + +KK GYS VE+ +F +D++HP + +I+ L
Sbjct: 440 RWKDAARLRKIIREKEIKKPIGYSSVELESGHKKFGVNDETHPLTTEIFETL 491
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/272 (31%), Positives = 132/272 (48%), Gaps = 9/272 (3%)
Query: 81 SMLDGYAKCG--DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
++D Y++ G ++ AR+VFD + E+DV W+ +I GY G + EAL V+ MR+SG
Sbjct: 57 KLIDKYSQLGGTNVEHARKVFDDLSERDVFCWNNVIKGYANMGPFAEALHVYNAMRLSGA 116
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN T VL AC KGR++H V+ L L + + V YAKC I+ +
Sbjct: 117 APNRYTYPFVLKACGAERDCLKGRIIHGNVVKCGLEFDLFVGNAFVAFYAKCKEIEASRK 176
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM---HIVGVKPDEITYLNLLSAC 255
VF M D+ WNSM+ G+ +G V E++ LF +M +G PD T + +L A
Sbjct: 177 VFDE--MLERDIVSWNSMMSGYIANGYVDEAVMLFCDMLRDDGIGF-PDNATLVTVLPAF 233
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
A + ++ + K GM ++ + + G + A QIP +
Sbjct: 234 AEKADIHAGYWIHCYIVKTGMKLDPAVGCGLITLYSNCGYIRMAKAVFDQIP-DRNVIVW 292
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
A++ HG A ++ R+L+EL H DG
Sbjct: 293 SAIIRCYGMHGFAQEALSMFRQLVELGLHLDG 324
>IMGA|Medtr6g069900.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 13044354-13047704 H
EGN_Mt090430 20090702
Length = 480
Score = 239 bits (611), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 143/418 (34%), Positives = 222/418 (53%), Gaps = 64/418 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G FP+ +F F A L G + + K G + + FV N+LI M+
Sbjct: 27 GFFPNRYSFVFAFGACGNGLCVREGEQVFLHAVKVGLDCNVFVVNALIGMF--------- 77
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
K GD+ AR+VFDL +D+ SW+ +I YV G +
Sbjct: 78 ----------------------GKWGDVEDARKVFDLAVYRDLYSWNAMIGAYV--GCFM 113
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F +M S KPNE TMVS L AC+ L ALD+G +H Y+ E+ + L SL+
Sbjct: 114 EALDLFHKMLQSEVKPNEYTMVSTLAACSKLVALDQGNWIHVYIRRGEIKMNDRLLASLI 173
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG I+ A VF C VK ++ V P+
Sbjct: 174 DMYAKCGEIESASSVF---------------------CEHKVKRKVER--------VSPN 204
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++T++ LL+AC+HG +VKE +F+ +G + G+ P+ EHY CMVD+++R+G + +A + +
Sbjct: 205 KVTFIALLNACSHGYMVKEGKSYFELMGSDYGINPEIEHYGCMVDLLSRSGLLKDAEEMI 264
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P+ P ++ GALLN C + ++ +GR + E++P+ G V L N+Y+ RW+
Sbjct: 265 LSMPMAPDVAIWGALLNACRIYKDMERRYRIGRIIKEIDPNHIGCNVLLGNIYSTSERWN 324
Query: 364 KARSMREAME-RMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+AR +RE E KK PG+S +E++G H+F+ D+SHP S++IY L ++S++K
Sbjct: 325 EARMLREKNEINSDRKKIPGFSSIELNGIFHQFLVGDRSHPKSKEIYSFLDEMISKLK 382
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 105/212 (49%), Gaps = 13/212 (6%)
Query: 123 YDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
Y +++AVF+ + R SG PN + V AC + + +G + + + L + +
Sbjct: 12 YRDSVAVFKLLTRDSGFFPNRYSFVFAFGACGNGLCVREGEQVFLHAVKVGLDCNVFVVN 71
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+L+ M+ K G +++A VF + + D++ WN+MIG + G E+LDLF +M V
Sbjct: 72 ALIGMFGKWGDVEDARKVFDLAVYR--DLYSWNAMIGAYV--GCFMEALDLFHKMLQSEV 127
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
KP+E T ++ L+AC+ + + + + + + A ++D+ A+ G++ A
Sbjct: 128 KPNEYTMVSTLAACSKLVALDQGNWIHVYIRRGEIKMNDRLLASLIDMYAKCGEIESASS 187
Query: 302 FLCQIPIQ-------PTASMLGALLNGCMNHG 326
C+ ++ P ALLN C +HG
Sbjct: 188 VFCEHKVKRKVERVSPNKVTFIALLNAC-SHG 218
>IMGA|AC235567_11.1 Pentatricopeptide repeat AC235567.1 44989-43022
H EGN_Mt090430 20090702
Length = 655
Score = 238 bits (607), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 124/395 (31%), Positives = 213/395 (53%), Gaps = 34/395 (8%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
+ G +H + + ++SD V+++LI+MY
Sbjct: 287 DFGKQVHSLVLRQSFDSDVLVASALINMY------------------------------- 315
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
AK +I AR+VFD M ++V++W+ +I G+ GD +E + + +EM G P+E+T+
Sbjct: 316 AKSENIIDARRVFDEMSIRNVVAWNTMIVGFGNHGDGNEVMKLVKEMLREGFLPDELTIS 375
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
S++ +C + A+ + +H + + L + SL+ Y+KCG+I A F L
Sbjct: 376 SIISSCGYASAITETLQVHAFAVKLSCQDFLSVANSLISAYSKCGSITSAFKCFE--LTS 433
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D+ W S+I +A HGL ++S ++F +M G+KPD I +L +LSACAH GLV + +
Sbjct: 434 QPDLVTWTSLIYAYAFHGLAEKSTEMFEKMLSYGIKPDRIAFLGVLSACAHCGLVTKGLH 493
Query: 267 FFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
+F + + P SEHY C+VD++ R G + EA++ L +PI+ + LGA + C H
Sbjct: 494 YFKLMTNAYQIVPDSEHYTCLVDLLGRYGLINEAFEILRSMPIEVDSDTLGAFIGSCKLH 553
Query: 326 GKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSF 385
++LA+ KL +EP + Y +SN++A + W +R+ ME K PG S+
Sbjct: 554 SNMELAKLAAEKLFLIEPEKSVNYAVMSNIFASQKHWYDVERIRKTMEDKRDAKVPGCSW 613
Query: 386 VEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+E+ +H FV++DKSHP++ ++Y+ L ++ MK
Sbjct: 614 IEIGNQIHSFVSNDKSHPNALEMYVTLNMLLRPMK 648
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 111/232 (47%), Gaps = 27/232 (11%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G +H ++ K G+ + N ++ +Y ++ +A+K+F+ +PV+N+VSWN M+
Sbjct: 79 GKQLHAHLIKFGFCQVLSLQNQILSVYLKCQEAEDAKKLFEELPVRNVVSWNIMIRA--- 135
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
S+ R +++ S L Y R+ + EM V P+ +T +
Sbjct: 136 ----SVGRN------DENESSGMRLCFSYFRR--------MLLEMMV----PDHITFNGL 173
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+C C ++ G +H + + L + +LV +YAKCG ++ A VF +
Sbjct: 174 ICLCTQFNDIEMGVQLHCFTVKVGFDLDCFVGCALVGLYAKCGFVENARRVFCD--VSCR 231
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
D+ +WN M+ + + L +E+ +F+ M + V DE T+ +LLS + L
Sbjct: 232 DLVMWNVMVSCYVFNSLPEEAFRVFNSMRLDVVNGDEFTFSSLLSVISDDAL 283
>IMGA|Medtr7g096950.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 21831382-21828916 E
EGN_Mt090430 20090702
Length = 811
Score = 237 bits (605), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 218/387 (56%), Gaps = 8/387 (2%)
Query: 39 AGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS----WNSMLDGYAKCGDISM 94
G++ F +L+ + + ++ R++ V + +S NS++D YAKCG+
Sbjct: 331 TGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVGNSLVDMYAKCGEFGE 390
Query: 95 ARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
A ++F + Q + W+ +I YV+KG +++ L +F EM+ + + T S++ ACA
Sbjct: 391 ANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACAS 450
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L +L G+ +H ++I + + ++LVDMYAKCG+I++AL +F+ M + WN
Sbjct: 451 LASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDALQMFQE--MPVRNSVSWN 508
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK- 273
++I +A +G +L LF EM G++PD ++ L++L AC+H GLV+E +FD + +
Sbjct: 509 ALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMTRI 568
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET 333
+ PK EHYA +D++ R G+ EA + + Q+P +P M ++LN C H +LA+
Sbjct: 569 YKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIHKNQELAKK 628
Query: 334 VGRKLIELEPHQDGR-YVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGAL 392
+L ++ +D YV +SN+YA WD +++AM GVKK P YS+VE+
Sbjct: 629 AANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGVKKVPAYSWVEIKHKT 688
Query: 393 HRFVAHDKSHPSSEQIYMMLGFIVSQM 419
H F A+DK+HP +I L + +M
Sbjct: 689 HVFTANDKTHPQMREIMKKLDELEEKM 715
Score = 139 bits (349), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 127/225 (56%), Gaps = 2/225 (0%)
Query: 30 LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKC 89
L + I K G+ + + SN L+ + D+ ARK+FD +P KN+ S N+M+ GY K
Sbjct: 23 LHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYIKS 82
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G++S AR +FD M ++ ++W+ LI GY + + EA +F EM G P+ V++ ++L
Sbjct: 83 GNLSEARTLFDSMFQRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLL 142
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
++++ R +H +VI TLV+ SL+D Y K ++ A +F + D
Sbjct: 143 SGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFND--IPERD 200
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+N+++ G++ G +E+++LF +M VG +P E T+ +L+A
Sbjct: 201 SVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTA 245
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 145/329 (44%), Gaps = 34/329 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M VG P TF + A L E G +HG++ K + + FV+N+L
Sbjct: 227 MQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANAL--------- 277
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
LD Y+K + A ++F MPE D +S++ L+ Y
Sbjct: 278 ----------------------LDFYSKHDRVVEASKLFYEMPEVDGISYNVLVTCYAWN 315
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G E+L +F+E++ +G ++L A LD GR +H I + +++
Sbjct: 316 GRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEILVG 375
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SLVDMYAKCG EA +F S L S V W +MI + GL ++ L LF EM
Sbjct: 376 NSLVDMYAKCGEFGEANRIF-SDLAIQSSV-PWTAMISSYVQKGLHEDGLKLFVEMQRAK 433
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ D TY +++ ACA + + +G + +VD+ A+ G + +A
Sbjct: 434 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 493
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLD 329
Q ++P++ + S AL++ +G D
Sbjct: 494 QMFQEMPVRNSVSW-NALISAYAQNGDGD 521
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 152/329 (46%), Gaps = 23/329 (6%)
Query: 24 LKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV----KNLVSW 79
+ GL I + + G + D +L+ ++ F + R+V + LV
Sbjct: 116 FREAFGLFIE--MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVS 173
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS+LD Y K + +A Q+F+ +PE+D ++++ L+ GY ++G EA+ +F +M+ G +
Sbjct: 174 NSLLDSYCKTRSLGLAFQLFNDIPERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYR 233
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P E T ++L A L ++ G+ +H +V+ + + +L+D Y+K + EA +
Sbjct: 234 PTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFVANALLDFYSKHDRVVEASKL 293
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA--- 256
F M D +N ++ +A +G VKESL+LF E+ G + LLS A
Sbjct: 294 FYE--MPEVDGISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISL 351
Query: 257 ---HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---P 310
G + D + + + +VD+ A+ G+ EA + + IQ P
Sbjct: 352 NLDIGRQIHSQTIVTDAISEILVGNS------LVDMYAKCGEFGEANRIFSDLAIQSSVP 405
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLI 339
+M+ + + ++ L L + R I
Sbjct: 406 WTAMISSYVQKGLHEDGLKLFVEMQRAKI 434
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 126/274 (45%), Gaps = 45/274 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R + D T+ + +A A L LG +H +I +GY S+ F ++L+ MY+
Sbjct: 429 MQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGS 488
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A ++F +PV+N VSWN+++ YA+
Sbjct: 489 IKDALQMFQEMPVRNSVSWNALISAYAQ-------------------------------N 517
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD D L +FEEM SG +P+ V+++S+LCAC+H G +++G Y LV +
Sbjct: 518 GDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGL---QYFDSMTRIYKLVPK 574
Query: 181 ----TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG---LVKESLDLF 233
S +DM + G EA + +P ++ +W+S++ H L K++ +
Sbjct: 575 KEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEI-MWSSVLNSCGIHKNQELAKKAANQL 633
Query: 234 SEMHIVGVKPDEITYLNLLSACA---HGGLVKEA 264
M ++ +T N+ +A + G VK+A
Sbjct: 634 FNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKA 667
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 79/192 (41%), Gaps = 9/192 (4%)
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM-YAKCGAIQ 194
+G PN ++ + G L+ R + +E+P + T+ + M Y K G +
Sbjct: 32 TGFNPNTYRSNFLVKSFLQRGDLNGARKLF-----DEMPHKNIFSTNTMIMGYIKSGNLS 86
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA +F S + + W +IGG+A + +E+ LF EM G+ PD ++ LLS
Sbjct: 87 EARTLFDSMFQRTA--VTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLATLLSG 144
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASM 314
V E + K G ++D + + A+Q IP + + +
Sbjct: 145 FTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRSLGLAFQLFNDIPERDSVT- 203
Query: 315 LGALLNGCMNHG 326
ALL G G
Sbjct: 204 FNALLTGYSKEG 215
>IMGA|Medtr4g128840.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 30463277-30466037 H
EGN_Mt090430 20090702
Length = 710
Score = 236 bits (603), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 226/403 (56%), Gaps = 10/403 (2%)
Query: 29 GLAIHGYITKAG-----YESDRFVSNSL-IHMYSSFRDIPNARKVFDGIPVKNLVSWNSM 82
GL G + +AG +SN+L I Y+ ++K+F+ + +K+L S N+M
Sbjct: 251 GLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTM 310
Query: 83 LDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+ Y+K G++ A ++FD E++ ++W+ ++ GY+ G++ EAL ++ MR + +
Sbjct: 311 ITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYS 370
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T + ACA+L + +G+++H ++ + + T+LVD Y+KCG + +A F
Sbjct: 371 RSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFT 430
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
S + P +V W ++I G+A HG E++ F M GV P+ T++ +LSAC+H GLV
Sbjct: 431 S-IFSP-NVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLV 488
Query: 262 KEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
E FF + N +TP EHY C+VD++ R+G+V EA +F+ Q+PI+ + GALLN
Sbjct: 489 DEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLN 548
Query: 321 GCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKS 380
++L E KL L+P+ V LSN+YA RW K +R+ ++ + ++K
Sbjct: 549 ASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKD 608
Query: 381 PGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIV 423
G+S++E++ +H F D +HP S+ IY + I + + IV
Sbjct: 609 QGFSWIELNNNVHLFSVEDTTHPYSDVIYKTVEHITATINSIV 651
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 17/320 (5%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LG IH + K+GY+ V ++L+H Y I A VF+ + +N V W+ ML GY
Sbjct: 59 LGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYV 118
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD-YDEALAVFEEMRVSGPK-PNEVTM 145
+ I A ++F+ MP +DV++W+ LI GY ++ D + AL +F MR S PNE T+
Sbjct: 119 QRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTL 178
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VL CA L L G+++H I + + ++L + Y A+ +A V+ S ++
Sbjct: 179 DCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYES-MV 237
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL-LSACAHGGLVKEA 264
+ + +S+IGG G VKE+ +F G++ + NL + A G K++
Sbjct: 238 GEACSNVADSLIGGLVSMGRVKEAGMIF-----YGLRDKTLISNNLMIKGYAMSGQFKKS 292
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
F+ + +T + M+ V ++ G++ EA + + + ++++G ++
Sbjct: 293 KKLFEKMSLKHLTSLNT----MITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIH 348
Query: 325 HGK----LDLAETVGRKLIE 340
+G+ L L T+ R L+E
Sbjct: 349 NGEHSEALKLYVTMRRFLVE 368
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
TF L +A A L + G +H ++ K Y+ + +V +L+ YS + +A++ F I
Sbjct: 373 TFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSI 432
Query: 72 PVKNLVSWNSMLDGYA--KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
N+ +W ++++GYA CG EA++
Sbjct: 433 FSPNVAAWTALINGYAYHGCG---------------------------------SEAISR 459
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYA 188
F M G PN T V+VL AC+H G +D+G + H I+ + T+ T +VD+
Sbjct: 460 FRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLG 519
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+ G ++EA F + +D IW +++
Sbjct: 520 RSGRVKEA-EEFIIQMPIKADGVIWGALLNA 549
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 95/193 (49%), Gaps = 8/193 (4%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP + V SW+ +I GY + G Y EAL + M S K NEV+ + L AC G+L G
Sbjct: 1 MPLRTVSSWNTMISGYSQWGKYTEALTLVSFMHSSCVKFNEVSFSACLSACTRGGSLFLG 60
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H + + + ++L+ Y +C I+EA VF ++ + +W+ M+ G+
Sbjct: 61 KQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEE--LRDENHVLWSLMLAGYV 118
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA-HGGLVKEAWYFFDCLGKNG-MTPK 279
++ +++++F +M + D + + L+S A + A F C+ ++ + P
Sbjct: 119 QRDMIGDAMEIFEKMPV----RDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPN 174
Query: 280 SEHYACMVDVMAR 292
C++ V AR
Sbjct: 175 EFTLDCVLRVCAR 187
>IMGA|Medtr4g128730.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 30395072-30398018 H
EGN_Mt090430 20090702
Length = 772
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 131/403 (32%), Positives = 226/403 (56%), Gaps = 10/403 (2%)
Query: 29 GLAIHGYITKAG-----YESDRFVSNSL-IHMYSSFRDIPNARKVFDGIPVKNLVSWNSM 82
GL G + +AG +SN+L I Y+ ++K+F+ + +K+L S N+M
Sbjct: 313 GLVSMGRVKEAGMIFYGLRDKTLISNNLMIKGYAMSGQFKKSKKLFEKMSLKHLTSLNTM 372
Query: 83 LDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+ Y+K G++ A ++FD E++ ++W+ ++ GY+ G++ EAL ++ MR + +
Sbjct: 373 ITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIHNGEHSEALKLYVTMRRFLVEYS 432
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T + ACA+L + +G+++H ++ + + T+LVD Y+KCG + +A F
Sbjct: 433 RSTFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFT 492
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
S + P +V W ++I G+A HG E++ F M GV P+ T++ +LSAC+H GLV
Sbjct: 493 S-IFSP-NVAAWTALINGYAYHGCGSEAISRFRSMLDQGVVPNAATFVAVLSACSHAGLV 550
Query: 262 KEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
E FF + N +TP EHY C+VD++ R+G+V EA +F+ Q+PI+ + GALLN
Sbjct: 551 DEGLKFFHSMQINYRITPTIEHYTCVVDLLGRSGRVKEAEEFIIQMPIKADGVIWGALLN 610
Query: 321 GCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKS 380
++L E KL L+P+ V LSN+YA RW K +R+ ++ + ++K
Sbjct: 611 ASCFWNNVELGERAAVKLFSLDPNSVSALVTLSNMYARRGRWGKKTKIRKRLQSLELRKD 670
Query: 381 PGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIV 423
G+S++E++ +H F D +HP S+ IY + I + + IV
Sbjct: 671 QGFSWIELNNNVHLFSVEDTTHPYSDVIYKTVEHITATINSIV 713
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/320 (28%), Positives = 160/320 (50%), Gaps = 17/320 (5%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
LG IH + K+GY+ V ++L+H Y I A VF+ + +N V W+ ML GY
Sbjct: 121 LGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIREAEMVFEELRDENHVLWSLMLAGYV 180
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD-YDEALAVFEEMRVSGPK-PNEVTM 145
+ I A ++F+ MP +DV++W+ LI GY ++ D + AL +F MR S PNE T+
Sbjct: 181 QRDMIGDAMEIFEKMPVRDVVAWTTLISGYAKREDGCERALDLFGCMRRSSEVLPNEFTL 240
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VL CA L L G+++H I + + ++L + Y A+ +A V+ S ++
Sbjct: 241 DCVLRVCARLRILYVGKVVHGLCIKDGFDFDNSVSSALAEFYCVSDAVDDAKRVYES-MV 299
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL-LSACAHGGLVKEA 264
+ + +S+IGG G VKE+ +F G++ + NL + A G K++
Sbjct: 300 GEACSNVADSLIGGLVSMGRVKEAGMIF-----YGLRDKTLISNNLMIKGYAMSGQFKKS 354
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
F+ + +T + M+ V ++ G++ EA + + + ++++G ++
Sbjct: 355 KKLFEKMSLKHLTSLNT----MITVYSKNGELDEAVKLFDKTKGERNCVTWNSMMSGYIH 410
Query: 325 HGK----LDLAETVGRKLIE 340
+G+ L L T+ R L+E
Sbjct: 411 NGEHSEALKLYVTMRRFLVE 430
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 111/220 (50%), Gaps = 8/220 (3%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+++S N + +AK G + AR +FD MP + V SW+ +I GY + G Y EAL + M
Sbjct: 36 HVISTNISIAHHAKTGKLVEARHMFDEMPLRTVSSWNTMISGYSQWGKYTEALTLVSFMH 95
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
S K NEV+ + L AC G+L G+ +H + + + ++L+ Y +C I+
Sbjct: 96 SSCVKFNEVSFSACLSACTRGGSLFLGKQIHSLLFKSGYQRFGPVGSALLHYYVQCCGIR 155
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA VF ++ + +W+ M+ G+ ++ +++++F +M + D + + L+S
Sbjct: 156 EAEMVFEE--LRDENHVLWSLMLAGYVQRDMIGDAMEIFEKMPV----RDVVAWTTLISG 209
Query: 255 CA-HGGLVKEAWYFFDCLGKNG-MTPKSEHYACMVDVMAR 292
A + A F C+ ++ + P C++ V AR
Sbjct: 210 YAKREDGCERALDLFGCMRRSSEVLPNEFTLDCVLRVCAR 249
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 94/211 (44%), Gaps = 37/211 (17%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
TF L +A A L + G +H ++ K Y+ + +V +L+ YS + +A++ F I
Sbjct: 435 TFSVLFRACAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFTSI 494
Query: 72 PVKNLVSWNSMLDGYA--KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
N+ +W ++++GYA CG EA++
Sbjct: 495 FSPNVAAWTALINGYAYHGCG---------------------------------SEAISR 521
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYA 188
F M G PN T V+VL AC+H G +D+G + H I+ + T+ T +VD+
Sbjct: 522 FRSMLDQGVVPNAATFVAVLSACSHAGLVDEGLKFFHSMQINYRITPTIEHYTCVVDLLG 581
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+ G ++EA +K +D IW +++
Sbjct: 582 RSGRVKEAEEFIIQMPIK-ADGVIWGALLNA 611
>IMGA|Medtr4g011410.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 1644328-1648691 E
EGN_Mt090430 20090702
Length = 871
Score = 236 bits (601), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 132/420 (31%), Positives = 224/420 (53%), Gaps = 34/420 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + V P+ TF + A A L + G IHG+ + G VSNS+I +YS
Sbjct: 344 MRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGL 403
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A VFDG+ K+++SW++++ Y + S A++ F+ LSW
Sbjct: 404 LQEASLVFDGMTRKDIISWSTIISVYCQG---SHAKEAFNY------LSW---------- 444
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
M GPKPNE + SVL C + L+ G+ +H Y + L ++
Sbjct: 445 ------------MSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVH 492
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+ MY++ G +QEA +F S +K +D+ W +MI G+A HG +E++ LF + VG
Sbjct: 493 SALISMYSRSGNLQEASKIFDS--IKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVG 550
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
+ PD +T++ +L+AC H GLV +Y++ + + P EHY C++D++ RAG+++EA
Sbjct: 551 LMPDYVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEA 610
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ +P + LL C +HG LD A +++ L P+ G ++ L+N+Y+
Sbjct: 611 EHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSAS 670
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
R ++A +R+ M+ GV K PG+S++ + L+ FVA +SHP S+QI +L + + +
Sbjct: 671 GRREEAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELLRTSI 730
Score = 125 bits (313), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 145/329 (44%), Gaps = 40/329 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V D TF KASA G AIH K G+ +V N+L MYS
Sbjct: 243 MWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYS---- 298
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KC ++F M DV+SW+ LI YV+
Sbjct: 299 ---------------------------KCRKPDYVMRLFGKMSTPDVVSWTNLIMTYVQM 331
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
GD + AL F+ MR S PNE T SV+ ACA+L G +H + + L L +
Sbjct: 332 GDEERALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVS 391
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
S++ +Y+KCG +QEA VF M D+ W+++I + KE+ + S M G
Sbjct: 392 NSIITLYSKCGLLQEASLVFDG--MTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREG 449
Query: 241 VKPDEITYLNLLSACAHGGLV---KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
KP+E ++LS C L+ K+ + C+ G+ ++ ++ ++ + +R+G +
Sbjct: 450 PKPNEFALASVLSVCGSMALLEPGKQVHAYALCI---GLDHETMVHSALISMYSRSGNLQ 506
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHG 326
EA + I S A++NG HG
Sbjct: 507 EASKIFDSIKNNDIVSWT-AMINGYAEHG 534
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 96/190 (50%), Gaps = 3/190 (1%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V N+ NS L K G I AR +F+ M +D +SW+ LI GYV + +EAL +F
Sbjct: 81 VPNMPELNSQLKQLMKLGKICEARDMFNKMSHRDEISWTNLIAGYVNAANSNEALILFSN 140
Query: 133 MRV-SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
M V SG + ++ + L ACA + G ++H + + + L ++ + ++LVDMY K G
Sbjct: 141 MWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVG 200
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
++ VF + M +V W ++I G G + L FSEM V D T+
Sbjct: 201 KTEQGCSVFEN--MTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVA 258
Query: 252 LSACAHGGLV 261
L A A GL+
Sbjct: 259 LKASAESGLL 268
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/369 (24%), Positives = 142/369 (38%), Gaps = 77/369 (20%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D KA A + G +HG+ K+G + FVS++L+ MY
Sbjct: 146 GLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINSVFVSSALVDMYMKVGKTEQG 205
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
VF+ + +N+VSW +++ G G C +DG
Sbjct: 206 CSVFENMTTRNVVSWTAVIVGLVHAG---------------------CSLDG-------- 236
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
L+ F EM S + T L A A G L G+ +H I T + +L
Sbjct: 237 --LSYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLG 294
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
MY+KC + +F G M DV W ++I + G + +LD F M V P+
Sbjct: 295 TMYSKCRKPDYVMRLF--GKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPN 352
Query: 245 EITYLNLLSACA-----------HG------------------------GLVKEAWYFFD 269
E T+ +++SACA HG GL++EA FD
Sbjct: 353 EYTFASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFD 412
Query: 270 CLGKNGMTPKS-EHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNH 325
GMT K ++ ++ V + EA+ +L + + P L ++L+ C +
Sbjct: 413 -----GMTRKDIISWSTIISVYCQGSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSM 467
Query: 326 GKLDLAETV 334
L+ + V
Sbjct: 468 ALLEPGKQV 476
>IMGA|Medtr7g010260.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 2188928-2186826 H
EGN_Mt090430 20090702
Length = 700
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 136/437 (31%), Positives = 219/437 (50%), Gaps = 34/437 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV D +T+ + + LGL +H + K G D FV + L+ M+
Sbjct: 218 MVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMF----- 272
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCGD+ AR+VFD + ++V+ W+ L+ Y++
Sbjct: 273 --------------------------GKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQN 306
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+++E L + M G NE T +L A A + AL G ++H V + +++
Sbjct: 307 GEFEETLNLLSCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVG 366
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MY+KCG I + VF M+ D+ WN+MI G++ HGL K++L LF +M G
Sbjct: 367 NALINMYSKCGCIDSSYDVFFD--MRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAG 424
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
P+ +T++ +LSACAH LV E +Y+ + L K+ + P EHY C+V V+ RAG + EA
Sbjct: 425 ECPNHVTFVGVLSACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEA 484
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
F+ ++ LLN C H +L + +++++P G Y LSN+YA
Sbjct: 485 ENFMRTTQVKWDVVAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKA 544
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQM 419
R WD +R+ M VKK PG S++E+ A+H F + +HP QIY + ++ +
Sbjct: 545 RSWDSVTMIRKMMRERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMI 604
Query: 420 KHIVDYENQEYYFYDNE 436
K + N E +D E
Sbjct: 605 KQLGYVPNIEAVLHDVE 621
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 118/228 (51%), Gaps = 3/228 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N++ NS+++ Y KC + +AR +FD M + V+S++ L+ GY+ G++ E + +F+ M
Sbjct: 54 NIIQLNSLINLYVKCSKLRLARYLFDEMSLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMV 113
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
S +PNE +VL ACAH G + +G H ++ L +++SLV MY+KC +
Sbjct: 114 SSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCFHVD 173
Query: 195 EALHVFRS---GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
AL V S + +D F +NS++ G + E++++ M GV D +TY+++
Sbjct: 174 LALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSV 233
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ C + L K G+T + +VD+ + G V A
Sbjct: 234 MGLCGQIRDLGLGLQVHAQLLKGGLTFDVFVGSMLVDMFGKCGDVLSA 281
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 7/171 (4%)
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
++ SL+++Y KC ++ A ++F M V +N ++GG+ G E + LF
Sbjct: 53 FNIIQLNSLINLYVKCSKLRLARYLFDE--MSLRSVVSYNVLMGGYLHSGEHLEVVKLFK 110
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
M +P+E + +LSACAH G V E L K G+ + +V + ++
Sbjct: 111 NMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFHHFVKSSLVHMYSKCF 170
Query: 295 QVAEAYQFL----CQIPIQPTASMLGALLNGCMNHGKL-DLAETVGRKLIE 340
V A Q L I A ++LN + G+L + E +GR + E
Sbjct: 171 HVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVLGRMVDE 221
>IMGA|Medtr2g015190.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 4065030-4066851 F
EGN_Mt090430 20090702
Length = 515
Score = 234 bits (598), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 157/458 (34%), Positives = 226/458 (49%), Gaps = 74/458 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS--- 57
ML +H TF KA GL IH + K+G+ D F+ N+L++ Y S
Sbjct: 49 MLSCSSSHNHYTFTHALKACCSYHAHAKGLEIHARLIKSGHIFDGFIKNTLLYFYLSSND 108
Query: 58 -------FRDIPN---------------------ARKVFDGIPVK--------------- 74
F+ IP+ A + F I VK
Sbjct: 109 VVSATRVFKSIPSPDVVSWTSLISGLSKCGFETEAIEAFSSINVKPNALTLVSAISACSS 168
Query: 75 ----------------------NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSC 112
N+V +N+ LD YAKCG S AR VF M ++DV+SW+
Sbjct: 169 IGAIKFGKAIHAYGLKSLMIDGNIVFYNAALDLYAKCGFFSNARNVFVKMSKRDVISWTT 228
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
L+ Y R G EA+ VF++M VSG +PNE T+V+VL ACA +G+L G +H Y+
Sbjct: 229 LLMAYARGGQCGEAVEVFKQMIVSGEAEPNESTVVTVLSACASIGSLSLGCWVHDYIEKR 288
Query: 172 -ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESL 230
+L + + +LV+MY KCG ++ L VF + K DV W ++I G A +G K+ +
Sbjct: 289 IDLDVDGNIGNALVNMYVKCGDMKMGLKVFNMVVHK--DVISWGTVICGLAMNGYGKQVV 346
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDV 289
+FS M + GV PD++T++ LLSAC+H GLV E FF + + G+ P+ HY CMVD+
Sbjct: 347 QMFSHMLVHGVLPDDVTFIGLLSACSHVGLVSEGMMFFKAMRDSYGIVPQMSHYGCMVDM 406
Query: 290 MARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRY 349
RA EA FL +P++ + ALL C HG +++E + R I + G
Sbjct: 407 YGRASLFEEAVAFLKGMPVEAEGPIWSALLQACKTHGNEEMSEWI-RGQIHDKNVGVGTL 465
Query: 350 VGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
LSN+YA RWD A ++R+ M G+KK G S+VE
Sbjct: 466 ALLSNIYASSERWDDANNVRKIMRGTGLKKVAGLSWVE 503
>IMGA|Medtr8g112300.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 25172130-25174081 H
EGN_Mt090430 20090702
Length = 603
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/434 (31%), Positives = 224/434 (51%), Gaps = 37/434 (8%)
Query: 6 VFPDHLTFPFLAK--ASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+ PD +F F K A+ KR+ G+ +H + + G++ FV +LI MY+
Sbjct: 108 LLPDSFSFAFTLKGIANDGCSKRQ-GIQLHSHAFRHGFDDHIFVGTTLISMYAECGCYEY 166
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCG-------DISMARQVFDLMPEQDVLSWSCLIDG 116
ARKVFD + N+V+WN+++ +CG VF M +D SWS +I G
Sbjct: 167 ARKVFDEMSQPNVVAWNAVVTACFRCGMWRVLGVSFGWREVVFCEMKMRDDASWSTMIVG 226
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ + G + +A F+E+ +P+EV++ VL ACA GA + G+++H
Sbjct: 227 FAKSGSFHDAFGFFKELLRDRNRPSEVSLTGVLSACAQAGAFEFGKILH----------- 275
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI-WNSMIGGFACHGLVKESLDLFSE 235
G +++A +F M + W SMI A HG E++ +F E
Sbjct: 276 --------------GFMEKAGFLFGLQHMSAEKCIVSWTSMIAALAMHGRADEAIRVFHE 321
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAG 294
M GV+PD +T+++LL AC+H GLV++ F + G+ P EHY CMVD+ RA
Sbjct: 322 MEESGVRPDGVTFISLLYACSHSGLVEQGCALFSKMRNFYGIEPAIEHYGCMVDLYGRAA 381
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSN 354
++ +AY+F+ Q+PI P + LL C HG ++LAE V +L E++P+ G +V LSN
Sbjct: 382 RLQKAYEFIRQMPILPNVIIWRTLLGACSIHGNIELAELVKARLAEMDPNNSGDHVLLSN 441
Query: 355 VYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGF 414
VYA+ +W +R M +KK PG+S +E+ + FVA +K + +++ + L
Sbjct: 442 VYAVAGKWKDVAGIRRTMIEQSMKKIPGWSMIEIDKVNYGFVAGEKPNEVTKEAHDKLRE 501
Query: 415 IVSQMKHIVDYENQ 428
I+ +++ Y Q
Sbjct: 502 IMLRLREEEGYAPQ 515
>IMGA|Medtr4g084310.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 17707169-17705516 H
EGN_Mt090430 20090702
Length = 535
Score = 233 bits (595), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/403 (34%), Positives = 223/403 (55%), Gaps = 28/403 (6%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
P + KA + R G +H + K +E D FVS++LI MYS ++ +ARKVFDG
Sbjct: 133 FVIPSVLKACGHVGDRIYGEQVHCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDG 192
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP------------------------EQD 106
+ VK+LV+ N+++ GYA+ G + A + + M E D
Sbjct: 193 MVVKDLVAMNAVVSGYAQQGLPNEALSLVENMKLMGVNPNVVTWNALISGLMNEDRVEPD 252
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
V+SW+ ++ G+V+ +EA F++M + G P T+ ++L ACA + G+ +H
Sbjct: 253 VVSWTSVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEIHG 312
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
Y + + L +R++LVDMYAKCG I EA +F M + NSMI G+A HG
Sbjct: 313 YALVIGVEDDLYVRSALVDMYAKCGFISEARTLFYK--MPEKNTVTMNSMIFGYANHGCC 370
Query: 227 KESLDLFSEMHIVGV-KPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYA 284
+E+++LF++M + GV K D +T+ L+AC+H G ++ F + K + P+ EHYA
Sbjct: 371 EEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLEHYA 430
Query: 285 CMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH 344
CMVD+ RAG++ EAY + +P++P + GALL C NHG ++LAE + L ELEP
Sbjct: 431 CMVDLFGRAGKLEEAYGIIKSMPVKPDLFVWGALLAACRNHGHVELAEVAAKHLSELEPE 490
Query: 345 QDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
G + LS++YA W K ++ +++ ++K G S+++
Sbjct: 491 SAGNRLLLSSLYADAGTWGKVERIKRRIKKGKLRKLQGLSWID 533
Score = 118 bits (296), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 147/293 (50%), Gaps = 26/293 (8%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWN----SMLDGYAKCGDISMARQVFDLMPEQD 106
LI Y+ R + +K+ + V +N +++ Y CG +S+AR++FD +P+ +
Sbjct: 35 LIETYTHSRSLQQGKKLHALLTTNGYVRFNLIASNLITLYTTCGQLSIARKLFDKIPQTN 94
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMR-VSGPKPNEVTMV-SVLCACAHLGALDKGRMM 164
+ W LI R G +D AL VF EM+ ++ K N V ++ SVL AC H+G G +
Sbjct: 95 IHRWIALIATCARCGFHDHALEVFSEMQTLNDQKSNSVFVIPSVLKACGHVGDRIYGEQV 154
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
H V+ + + ++L+ MY+KCG +++A VF ++K D+ N+++ G+A G
Sbjct: 155 HCLVLKCSFEIDAFVSSALIVMYSKCGEVRDARKVFDGMVVK--DLVAMNAVVSGYAQQG 212
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA 284
L E+L L M ++GV P+ +T+ L+S GL+ E + + P +
Sbjct: 213 LPNEALSLVENMKLMGVNPNVVTWNALIS-----GLMNE----------DRVEPDVVSWT 257
Query: 285 CMVDVMA---RAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
++ R + +A++ + + PT++ + ALL C ++ + +
Sbjct: 258 SVLSGFVQNFRNEEAFDAFKKMLLLGFCPTSATISALLPACATEARVRFGKEI 310
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 119/260 (45%), Gaps = 44/260 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +G P T L A A + G IHGY G E D +V ++L+ MY+
Sbjct: 279 MLLLGFCPTSATISALLPACATEARVRFGKEIHGYALVIGVEDDLYVRSALVDMYAKCGF 338
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I AR +F +P KN V+ NSM+ GYA
Sbjct: 339 ISEARTLFYKMPEKNTVTMNSMIFGYAN-------------------------------H 367
Query: 121 GDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELP 174
G +EA+ +F +M + G PK + +T + L AC+H+G ++ G+ M Y I+ L
Sbjct: 368 GCCEEAIELFNQMEMEGVPKLDHLTFTAALTACSHVGDIELGQRLFKIMQEKYCIEPRLE 427
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+VD++ + G ++EA + +S +KP D+F+W +++ HG V+ L +
Sbjct: 428 ----HYACMVDLFGRAGKLEEAYGIIKSMPVKP-DLFVWGALLAACRNHGHVE--LAEVA 480
Query: 235 EMHIVGVKPDEITYLNLLSA 254
H+ ++P+ LLS+
Sbjct: 481 AKHLSELEPESAGNRLLLSS 500
>IMGA|Medtr2g018960.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 5105875-5107447 E
EGN_Mt090430 20090702
Length = 520
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 130/390 (33%), Positives = 214/390 (54%), Gaps = 10/390 (2%)
Query: 5 GVFPDHLTFPFLAKASACLLKR----ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
G PD TF + KAS + +LG +H I K E D + +LI Y
Sbjct: 133 GEKPDGFTFSMILKASTNRVSNGMVGDLGRMVHAQILKFDVEKDDVLCTALIDSYVKNGR 192
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ R VFD + KN++S S++ GY G A +F ++DV+ ++ +I+GY +
Sbjct: 193 VGYGRTVFDVMSEKNVISSTSLISGYMNKGFFDDAEYIFRKTLDKDVVVFNAMIEGYSKV 252
Query: 121 GDYD-EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+Y +L V+ +M+ +PN T S++ AC+ L A + G + ++ + L
Sbjct: 253 SEYAMRSLEVYIDMQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKL 312
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI- 238
++L+DMY+KCG + +A VF L K +VF W SMI G+ +G E+L+LF +M I
Sbjct: 313 GSALIDMYSKCGRVIDAQRVFDHMLEK--NVFSWTSMIDGYGKNGFPDEALELFKKMQIE 370
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVA 297
+ P+ +T+L+ L+ACAH GLV+ W F + + + P+ EHYACMVD++ RAG +
Sbjct: 371 YSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRMEHYACMVDLLGRAGWLN 430
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH-QDGRYVGLSNVY 356
+A++F+ ++P +P + + ALL+ C HG +++A+ +L +L + + G YV LSN
Sbjct: 431 QAWEFVTRMPERPNSDVWLALLSSCRIHGNIEMAKLAANELFKLNAYGRPGAYVALSNTL 490
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFV 386
A +WD +RE M+ G+ K S+V
Sbjct: 491 ADAGKWDNVSELREVMKEKGISKDTACSWV 520
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 120/251 (47%), Gaps = 43/251 (17%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNS----MLDGYAKCGDISMARQVFDL 101
F SN+L H Y + + + +K+ I V + +L Y K + ARQVFD
Sbjct: 39 FFSNTLQH-YINSQTPSHGQKIHSHILKTGFVPNTNISIKLLILYIKSHSLRYARQVFDD 97
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL--- 158
+ ++ + +++ +I GY++ G DE+L +F ++ VSG KP+ T +L A + +
Sbjct: 98 LHDRTLSAYNYMIGGYLKNGQVDESLDLFHQLSVSGEKPDGFTFSMILKASTNRVSNGMV 157
Query: 159 -DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI------------------------ 193
D GRM+H ++ ++ VL T+L+D Y K G +
Sbjct: 158 GDLGRMVHAQILKFDVEKDDVLCTALIDSYVKNGRVGYGRTVFDVMSEKNVISSTSLISG 217
Query: 194 -------QEALHVFRSGLMKPSDVFIWNSMIGGFA-CHGLVKESLDLFSEMHIVGVKPDE 245
+A ++FR L K DV ++N+MI G++ SL+++ +M + +P+
Sbjct: 218 YMNKGFFDDAEYIFRKTLDK--DVVVFNAMIEGYSKVSEYAMRSLEVYIDMQRLNFRPNL 275
Query: 246 ITYLNLLSACA 256
T+ +++ AC+
Sbjct: 276 STFASIIGACS 286
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 104/230 (45%), Gaps = 36/230 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R+ P+ TF + A + L E+G + + K + + + ++LI MYS
Sbjct: 266 MQRLNFRPNLSTFASIIGACSVLAAFEIGEQVQAQLMKTPFFAVIKLGSALIDMYSKCGR 325
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A++VFD + KN+ SW SM+DGY K G P
Sbjct: 326 VIDAQRVFDHMLEKNVFSWTSMIDGYGKNG-----------FP----------------- 357
Query: 121 GDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLV 178
DEAL +F++M++ PN VT +S L ACAH G +++G + + +L +
Sbjct: 358 ---DEALELFKKMQIEYSITPNFVTFLSALTACAHAGLVERGWEIFQSMESEYKLKPRME 414
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKP-SDVFIWNSMIGGFACHGLVK 227
+VD+ + G + +A +P SDV W +++ HG ++
Sbjct: 415 HYACMVDLLGRAGWLNQAWEFVTRMPERPNSDV--WLALLSSCRIHGNIE 462
>IMGA|Medtr4g136780.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 33517215-33515104 H
EGN_Mt090430 20090702
Length = 700
Score = 231 bits (589), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 149/421 (35%), Positives = 219/421 (52%), Gaps = 36/421 (8%)
Query: 19 ASACLLKRELGLAIHGYITKAGYES--DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL 76
A+A +L G+ IH + K G+ D FVS SL+ Y+S + + +A KVF
Sbjct: 234 AAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVF-------- 285
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
G C ++V+ W+ L+ G + EAL VF EM
Sbjct: 286 --------GETVC---------------KNVVVWTALLTGCGLNDKHVEALEVFSEMMRF 322
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
PNE + S L +C L L+KGR++H I L + SLV MY+KCG I +A
Sbjct: 323 NVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGFIGDA 382
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
L VF+ K +V WNS+I G A HG +L LF EM GV+ DEIT LLSAC+
Sbjct: 383 LCVFKGICEK--NVVSWNSVIVGCAQHGCGTWALVLFKEMLREGVESDEITLTGLLSACS 440
Query: 257 HGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
G++++A FF K M EHYACMVDV+ R G+V EA +P++ + +
Sbjct: 441 RSGMLQKARCFFGYFARKRSMKLTVEHYACMVDVLGRCGEVEEAEALATSMPVEANSMVW 500
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
LL+ C H LD+AE +++ E+EP YV LSN+YA RRW + +R M+
Sbjct: 501 LVLLSACRVHSSLDVAERAAKRIFEMEPDCSAAYVLLSNLYASSRRWLEVARIRMKMKHN 560
Query: 376 GVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDN 435
G+ K PG S++ + G H F++ D+SHP +E+IY L ++ +++ + +Q++ +D
Sbjct: 561 GIVKQPGSSWITLKGMRHEFLSADRSHPLTEEIYEKLVWLGVKLRELGYIPDQQFALHDV 620
Query: 436 E 436
E
Sbjct: 621 E 621
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 110/212 (51%), Gaps = 7/212 (3%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPV--KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD 106
++IH + S + A + F+ +P K++ +WN+M++GY G ++ A ++F MP +D
Sbjct: 129 TTIIHGFLSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMPSRD 188
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
V+SW+ +I G R G +AL F+ M SG + T+V L A A + G +H
Sbjct: 189 VISWTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIH 248
Query: 166 HYVIDNELPLTL--VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH 223
+ L + SLV YA C + +A VF + K +V +W +++ G +
Sbjct: 249 CCMFKFGFCCGLDEFVSASLVTFYASCKRMGDACKVFGETVCK--NVVVWTALLTGCGLN 306
Query: 224 GLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
E+L++FSEM V P+E ++ + L++C
Sbjct: 307 DKHVEALEVFSEMMRFNVVPNESSFTSALNSC 338
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 110/249 (44%), Gaps = 43/249 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R V P+ +F + L E G IH K G E+ + NSL+ MYS
Sbjct: 319 MMRFNVVPNESSFTSALNSCVGLEDLEKGRVIHAAGIKMGLENAVYTGNSLVVMYSKCGF 378
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAK--CGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
I +A VF GI KN+VSWNS++ G A+ CG +W
Sbjct: 379 IGDALCVFKGICEKNVVSWNSVIVGCAQHGCG------------------TW-------- 412
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTL 177
AL +F+EM G + +E+T+ +L AC+ G L K R Y + LT+
Sbjct: 413 -------ALVLFKEMLREGVESDEITLTGLLSACSRSGMLQKARCFFGYFARKRSMKLTV 465
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF--SE 235
+VD+ +CG ++EA + + ++ +W ++ AC V SLD+ +
Sbjct: 466 EHYACMVDVLGRCGEVEEA-EALATSMPVEANSMVWLVLLS--ACR--VHSSLDVAERAA 520
Query: 236 MHIVGVKPD 244
I ++PD
Sbjct: 521 KRIFEMEPD 529
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 79/343 (23%), Positives = 149/343 (43%), Gaps = 25/343 (7%)
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE--QDVLSWSCLIDG 116
+ + +AR VF+ IP ++ + +L YA ++ A +F+ +P +D +SW+ +I
Sbjct: 44 QKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFNQIPSNTKDTISWNSVIKA 103
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ D+ A+ +F+EM P+ N ++ +++ H G L GR+ N +P
Sbjct: 104 SIICNDFVTAVKLFDEM----PQRNSISWTTII----H-GFLSTGRVNEAERFFNAMPYV 154
Query: 177 ---LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ ++V+ Y G + +AL +F M DV W S+I G +G ++L F
Sbjct: 155 DKDVATWNAMVNGYCNNGRVNDALRLFCQ--MPSRDVISWTSIIVGLDRNGKSYQALFFF 212
Query: 234 SEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHY--ACMVDVM 290
M GV T + LSA A C+ K G + + A +V
Sbjct: 213 KNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHCCMFKFGFCCGLDEFVSASLVTFY 272
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGC-MNHGKLDLAETVGRKL-IELEPHQDGR 348
A ++ +A + + + + ALL GC +N ++ E + + P++
Sbjct: 273 ASCKRMGDACKVFGE-TVCKNVVVWTALLTGCGLNDKHVEALEVFSEMMRFNVVPNESSF 331
Query: 349 YVGLSNVYAIFRRWDKARSMREAMERMGVKKS--PGYSFVEMH 389
L++ + +K R + A +MG++ + G S V M+
Sbjct: 332 TSALNSCVGL-EDLEKGRVIHAAGIKMGLENAVYTGNSLVVMY 373
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/238 (21%), Positives = 98/238 (41%), Gaps = 19/238 (7%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P + S N + K + AR VF+ +P V ++ L+ Y + EA+ +F
Sbjct: 26 PKSSSTSLNFTFLNHLKNQKLDSARAVFNKIPSPHVSLYTKLLLAYAHNNNLHEAINLFN 85
Query: 132 EMRVSGPKP---NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LTLVLRTSLVDMY 187
++ + N V S++C + + +E+P + T+++ +
Sbjct: 86 QIPSNTKDTISWNSVIKASIIC----------NDFVTAVKLFDEMPQRNSISWTTIIHGF 135
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
G + EA F + DV WN+M+ G+ +G V ++L LF +M D I+
Sbjct: 136 LSTGRVNEAERFFNAMPYVDKDVATWNAMVNGYCNNGRVNDALRLFCQMP----SRDVIS 191
Query: 248 YLNLLSACAHGGLVKEAWYFF-DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLC 304
+ +++ G +A +FF + +G +G+ S C + A+ Q C
Sbjct: 192 WTSIIVGLDRNGKSYQALFFFKNMVGFSGVGISSTTLVCGLSAAAKILDFYAGIQIHC 249
>IMGA|Medtr5g028120.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 11562372-11564615 E
EGN_Mt090430 20090702
Length = 446
Score = 231 bits (588), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 120/348 (34%), Positives = 202/348 (58%), Gaps = 4/348 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+++ NS+++ Y KCG+I A VF+ M E+ V SWS +I + ++E L + +M
Sbjct: 6 DVIVQNSLINMYGKCGEIKNACDVFNGMDEKSVASWSAIIGAHACVEMWNECLMLLGKMS 65
Query: 135 VSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G + E T+V+VL AC HLG+ D G+ +H ++ N L +V++TSL+DMY K G +
Sbjct: 66 SEGRCRVEESTLVNVLSACTHLGSPDLGKCIHGILLRNISELNVVVKTSLIDMYVKSGCL 125
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
++ L VF++ M + + + MI G A HG KE+L +FSEM G+ PD++ Y+ + S
Sbjct: 126 EKGLRVFKN--MSEKNRYSYTVMISGLAIHGRGKEALKVFSEMIEEGLAPDDVVYVGVFS 183
Query: 254 ACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
AC+H GLV+E F + ++ + P +HY CMVD++ R G + EAY+ + + I+P
Sbjct: 184 ACSHAGLVEEGLQCFKSMQFEHKIEPTVQHYGCMVDLLGRFGMLKEAYELIKSMSIKPND 243
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
+ +LL+ C H L++ + L L + G Y+ L+N+YA ++WD +R +
Sbjct: 244 VIWRSLLSACKVHHNLEIGKIAAENLFMLNQNNSGDYLVLANMYAKAQKWDDVAKIRTKL 303
Query: 373 ERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+ ++PG+S +E +++FV+ DKS P IY M+ + Q+K
Sbjct: 304 AERNLVQTPGFSLIEAKRKVYKFVSQDKSIPQWNIIYEMIHQMEWQLK 351
>IMGA|Medtr7g099640.1 Asp/Glu racemase chr07_pseudomolecule_IMGAG_V3
22261682-22263162 E EGN_Mt090430 20090702
Length = 476
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 179/300 (59%), Gaps = 4/300 (1%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR- 59
M+ G PD T+PF+ A + G HG K G+ SD +V N+++++Y
Sbjct: 109 MICCGFLPDKFTYPFVINACIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGG 168
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
D+ + KVFD + V+N+VSW +++ G CG + AR+VF+ +P ++V+SW+ +I+GYV+
Sbjct: 169 DVDDGWKVFDKMRVRNVVSWTTVIAGLVACGKLDTAREVFERIPSKNVVSWTAMINGYVK 228
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ +A +FE M + +PNE T+VS++ AC LG+L GR MH + + N L L
Sbjct: 229 NDNPIKAFDLFERMLIDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFL 288
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
T+LVDMY+KCG++ A+ VF GLM+ ++ WN+M+ F HG E LDLF EM
Sbjct: 289 GTALVDMYSKCGSLDAAVKVF--GLMEVRNLATWNTMLTSFGVHGFGNEVLDLFKEMEKA 346
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAE 298
GV PD IT++ +LSAC ++ +F + ++ +TP EHY CMV + RA ++ E
Sbjct: 347 GVVPDAITFVGVLSACVQINDLELGQKYFSLMTEHYSLTPILEHYTCMVGLYTRANELNE 406
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/256 (24%), Positives = 110/256 (42%), Gaps = 34/256 (13%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G I A VFD + + D+ +W+ +I Y G +++ +F++M G P++ T V+
Sbjct: 66 GKIDYASLVFDQLNDPDIFTWNVMIRAYNTSGLPQKSIFLFKDMICCGFLPDKFTYPFVI 125
Query: 150 CACAHLGALDKGRMMHH-----------YVIDNELPL---------------------TL 177
AC G +D GR+ H YV +N + L +
Sbjct: 126 NACIASGVIDFGRLTHGLAIKMGFWSDVYVQNNMMNLYFKIGGDVDDGWKVFDKMRVRNV 185
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
V T+++ CG + A VF + +V W +MI G+ + ++ DLF M
Sbjct: 186 VSWTTVIAGLVACGKLDTAREVFER--IPSKNVVSWTAMINGYVKNDNPIKAFDLFERML 243
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
I V+P+E T ++L+ AC G +K D KNG +VD+ ++ G +
Sbjct: 244 IDNVRPNEFTLVSLIKACTDLGSLKLGRRMHDFALKNGFELGPFLGTALVDMYSKCGSLD 303
Query: 298 EAYQFLCQIPIQPTAS 313
A + + ++ A+
Sbjct: 304 AAVKVFGLMEVRNLAT 319
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 78/178 (43%), Gaps = 4/178 (2%)
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H +I L +L L + + G I A VF + D+F WN MI +
Sbjct: 37 KQIHARIIRFRLTHDQLLIRKLCQISSSYGKIDYASLVFDQ--LNDPDIFTWNVMIRAYN 94
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
GL ++S+ LF +M G PD+ TY +++AC G++ K G
Sbjct: 95 TSGLPQKSIFLFKDMICCGFLPDKFTYPFVINACIASGVIDFGRLTHGLAIKMGFWSDVY 154
Query: 282 HYACMVDVMAR-AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
M+++ + G V + ++ ++ ++ S ++ G + GKLD A V ++
Sbjct: 155 VQNNMMNLYFKIGGDVDDGWKVFDKMRVRNVVSW-TTVIAGLVACGKLDTAREVFERI 211
>IMGA|Medtr5g014130.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 4468654-4466447 H
EGN_Mt090430 20090702
Length = 735
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 122/368 (33%), Positives = 204/368 (55%), Gaps = 8/368 (2%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE--QD 106
NS+I+ Y + A+++FD +P++N ++W M+ GY G + A +FD MP+ +D
Sbjct: 368 NSMINGYVQAGQLHKAQELFDTVPIRNKIAWTCMISGYLSAGQVLKASNLFDDMPDSDKD 427
Query: 107 VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
++W+ +I GYV+ EA+ +F EM G P T + A + LD G +H
Sbjct: 428 SIAWTLMIYGYVQNELIAEAINLFAEMMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHA 487
Query: 167 YVIDN--ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+ E + L SL+ MYAKCG I++A +F + M D WNSMI G + HG
Sbjct: 488 MQLKTIYEYEYDVYLENSLISMYAKCGEIEDAYRIFSN--MNCRDKISWNSMIMGLSDHG 545
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHY 283
E+L+++ M GV PD +T+L +L+ACAH G V + F L + P EHY
Sbjct: 546 RANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGLEHY 605
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGC-MNHGKLDLAETVGRKLIELE 342
+++++ RAG+V +A +F+ ++P++P ++ GAL+ C ++ D+A +L+EL+
Sbjct: 606 VSIINILGRAGRVKDAEEFVLRLPVEPNHTIWGALIGVCGLSKTDADIARRAATRLLELD 665
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSH 402
P +V L N+YA R + S+R M GV+K+PG S++ + G +H F + D+
Sbjct: 666 PLNAPGHVTLCNIYAANDRHLEETSLRREMRMKGVRKAPGCSWILVKGKVHAFSSGDRLD 725
Query: 403 PSSEQIYM 410
P +E++ +
Sbjct: 726 PLAEEMLL 733
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 134/250 (53%), Gaps = 25/250 (10%)
Query: 31 AIHGYITKAGYESDRF------VSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLD 84
A HGY+ +A D N+++ Y A++ FD +P +N+VSW +ML
Sbjct: 83 AKHGYVEQARNLFDIMPHRNIVTYNAMLSAYLQSGMTRQAKRFFDDMPERNVVSWTAMLS 142
Query: 85 GYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
GYA G I AR+VFD MPE++V+SW+ ++ G +R GD +EA VF++ P N V+
Sbjct: 143 GYAGLGWIDDARKVFDEMPERNVVSWNSMVVGLIRNGDLEEARKVFDDT----PDKNVVS 198
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+++ G +D + + D ++ TS++ Y + G + EA +F+ +
Sbjct: 199 WNAMIEGYVENGRMDDAKDL----FDQIECRNVITWTSMISGYCRVGDVNEAFRLFQ--I 252
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKE 263
M +V W +MIGGFA +G +E+L LF +M + KP+E T+++L+ ACA G
Sbjct: 253 MPEKNVVSWTAMIGGFAWNGFYREALLLFLDMMTLSDAKPNEETFVSLVYACAGMG---- 308
Query: 264 AWYFFDCLGK 273
F CLGK
Sbjct: 309 ----FPCLGK 314
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 106/235 (45%), Gaps = 38/235 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKA--GYESDRFVSNSLIHMYSSF 58
M+ G P + T+ L A + +LG +H K YE D ++ NSLI MY+
Sbjct: 454 MMAQGASPINSTYAVLFGAVGSVAYLDLGWQLHAMQLKTIYEYEYDVYLENSLISMYAKC 513
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
+I +A ++F + ++ +SWNSM+ G +
Sbjct: 514 GEIEDAYRIFSNMNCRDKISWNSMIMGLSD------------------------------ 543
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTL 177
G +EAL ++E M G P+ VT + VL ACAH G +DKG + ++ D L L
Sbjct: 544 -HGRANEALNMYETMLEFGVYPDAVTFLGVLTACAHAGFVDKGCELFSVMLNDYALQPGL 602
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
S++++ + G +++A ++P+ IW ++IG C GL K D+
Sbjct: 603 EHYVSIINILGRAGRVKDAEEFVLRLPVEPNHT-IWGALIG--VC-GLSKTDADI 653
>IMGA|Medtr8g118960.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 26862111-26858886 H
EGN_Mt090430 20090702
Length = 1024
Score = 230 bits (586), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 140/438 (31%), Positives = 219/438 (50%), Gaps = 37/438 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G P+ +TF + A + LG IH I K D + N+L+ Y
Sbjct: 540 MMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFY----- 594
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVR 119
KC + +F M E+ D +SW+ +I GY+
Sbjct: 595 --------------------------GKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLH 628
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G +A+ + M G K + T +VL ACA + L++G +H + L +V+
Sbjct: 629 SGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVV 688
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++LVDMYAKCG I A F LM +++ WNSMI G+A HG +++L +F+ M
Sbjct: 689 GSALVDMYAKCGKIDYASRFFE--LMPVRNIYSWNSMISGYARHGHGQKALKIFTRMKQH 746
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAE 298
G PD +T++ +LSAC+H GLV E + F +G+ G++P+ EH++CMVD++ RAG V +
Sbjct: 747 GQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRAGDVKK 806
Query: 299 AYQFLCQIPIQPTASMLGALLNGC--MNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
F+ +P+ P + +L C N +L + + LIELEP YV LSN++
Sbjct: 807 IEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNYVLLSNMH 866
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIV 416
A W+ R AM + VKK G S+V M +H FVA D++HP E+IY L ++
Sbjct: 867 AAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHPEKEKIYEKLKELM 926
Query: 417 SQMKHIVDYENQEYYFYD 434
++++ +Y YD
Sbjct: 927 NKIRDAGYVPETKYALYD 944
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 112/220 (50%), Gaps = 15/220 (6%)
Query: 48 SNSLIHMYSSFRDIPNARK------------VFDGIPVKNLVSWNSMLDGYAKCGDISMA 95
S SL+ + S+F + N ++ G+ + N++++ Y KC I A
Sbjct: 341 SESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNA 400
Query: 96 RQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
VF LMP +D +SW+ +I G ++EA++ F M+ +G P+ +++S L +C+ L
Sbjct: 401 CSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSL 460
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNS 215
G L GR +H L L + + +L+ +YA+ +I E VF M D WNS
Sbjct: 461 GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQ--MPEYDQVSWNS 518
Query: 216 MIGGFACH-GLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
IG A + V ++L F EM G +P+ +T++N+L+A
Sbjct: 519 FIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAA 558
Score = 99.4 bits (246), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 101/182 (55%), Gaps = 9/182 (4%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++++ Y + G++ AR++FD MP+++++SWSCLI GY + DEA ++F+ + SG
Sbjct: 69 NTLINIYVRIGNLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPDEACSLFKGVISSGLL 128
Query: 140 PNEVTMVSVLCACAHLGA--LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC-GAIQEA 196
PN + S L AC G+ + G +H ++ ++L L+ MY+ C G+I +A
Sbjct: 129 PNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDA 188
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV----KPDEITYLNLL 252
VF +K + WNS+I + G + LFS M + GV +P+E T +L+
Sbjct: 189 HRVFDE--IKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLV 246
Query: 253 SA 254
+A
Sbjct: 247 TA 248
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 137/340 (40%), Gaps = 89/340 (26%)
Query: 5 GVFPDHLTFPFLAKASACL----LKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR- 59
G+ P+H F + AC +LG+ IH +I K SD +SN L+ MYS
Sbjct: 126 GLLPNH--FAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSG 183
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP---------------- 103
I +A +VFD I +N V+WNS++ Y + GD A ++F +M
Sbjct: 184 SIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLC 243
Query: 104 -----------------EQ------------DVLSWSCLIDGYVRKGDYDEALAVFEEM- 133
EQ D+ S L++G+ R G D A +F++M
Sbjct: 244 SLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMY 303
Query: 134 ----------------RVSGPKP-------------NEVTMVSVLCACAHLGALD----K 160
+ G + N ++V +L L K
Sbjct: 304 DRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRK 363
Query: 161 GRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
G+ +H Y+ + L + + +LV+MY KC AI A VF+ LM D WNSMI G
Sbjct: 364 GQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQ--LMPSKDTVSWNSMISG 421
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
+ +E++ F M G+ P + ++ LS+C+ G
Sbjct: 422 LDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLG 461
>IMGA|Medtr5g046740.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 19669306-19666513 E
EGN_Mt090430 20090702
Length = 498
Score = 229 bits (583), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 142/425 (33%), Positives = 222/425 (52%), Gaps = 40/425 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ LT+PF+ K+ A L G +H + K G +SD +V N++I+ Y
Sbjct: 106 GVKPNKLTYPFIFKSCAMALVLCEGKQVHADLVKFGLDSDVYVCNNMINFYGC------- 158
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
C I AR+VFD M + ++SW+ ++ V
Sbjct: 159 ------------------------CKKIVYARKVFDEMCVRTIVSWNSVMTACVENVWLS 194
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ + F +MR +P+E +MV +L CA LG L GR +H +I + L++ L T+LV
Sbjct: 195 DGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHSQLILKGMVLSVHLGTALV 254
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH---IVGV 241
DMY K GA+ A VF M+ +V+ W++MI G A HG +E+L LF M+ +
Sbjct: 255 DMYGKSGALGYARVVFER--MEKRNVWTWSAMIMGLAQHGFAEEALVLFDMMNDKKSNNI 312
Query: 242 KPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
P+ +TYL +L AC+H G+V E + YF D +G+ P HY MVDV+ RAG + EAY
Sbjct: 313 SPNYVTYLGVLCACSHAGMVDEGFRYFRDMEFVHGIKPMMVHYGAMVDVLGRAGHLGEAY 372
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLD---LAETVGRKLIELEPHQDGRYVGLSNVYA 357
+F+ +P P + LL+ C H D + + V ++L+E+EP + G V ++N+YA
Sbjct: 373 RFIQSMPFAPDPIVWRTLLSACTVHDVCDRTGIGDKVRKRLLEMEPKRGGNLVIVANMYA 432
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
W+KA ++R M G+KK G S V++ G+++RF A S P +Y +L +
Sbjct: 433 EVGNWEKAANVRRVMRDGGLKKMAGESCVDLGGSMYRFFAGHDSRPDLMPVYDLLDALNL 492
Query: 418 QMKHI 422
+K +
Sbjct: 493 HLKMV 497
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 98/210 (46%), Gaps = 3/210 (1%)
Query: 91 DISMARQ-VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
++S AR+ VF +SW+ LI GY E++ VF++MR +G KPN++T +
Sbjct: 59 NLSHARKLVFHFSNNPSPISWNILIRGYASSDSPIESIWVFKKMRENGVKPNKLTYPFIF 118
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD 209
+CA L +G+ +H ++ L + + ++++ Y C I A VF M
Sbjct: 119 KSCAMALVLCEGKQVHADLVKFGLDSDVYVCNNMINFYGCCKKIVYARKVFDE--MCVRT 176
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
+ WNS++ + + + + F +M +PDE + + LLS CA G + +
Sbjct: 177 IVSWNSVMTACVENVWLSDGIGYFFKMRDCAFEPDETSMVLLLSVCAELGYLSLGRWVHS 236
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
L GM +VD+ ++G + A
Sbjct: 237 QLILKGMVLSVHLGTALVDMYGKSGALGYA 266
>IMGA|Medtr1g102670.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 21119349-21117399 H
EGN_Mt090430 20090702
Length = 606
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/411 (31%), Positives = 214/411 (52%), Gaps = 35/411 (8%)
Query: 11 LTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
+F A A + LG +H + G+ES
Sbjct: 211 FSFSIAVSACASIGSSNLGKQVHAAVINHGFES--------------------------- 243
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
NL N++LD Y +C S A+Q+F M ++D ++W+ LI G+ Y E+L +F
Sbjct: 244 ----NLPVMNAILDMYCRCRCASEAKQLFGEMTQKDTITWNTLIAGFETLDSY-ESLCIF 298
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M G PN T SV+ ACA+L L G+ +H +I L L L +L+DMYAKC
Sbjct: 299 SQMVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKC 358
Query: 191 GAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
G + ++ +F M+ +++ W SM+ G+ HG KE++DLF+EM G+KPD+I ++
Sbjct: 359 GNVADSHKIFSG--MRHTNLVSWTSMMIGYGAHGHGKEAVDLFNEMVGSGIKPDKIVFMA 416
Query: 251 LLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
+LSAC+H GLV E +F + + P + YAC+VD+++RAG+V EAY+ + +P +
Sbjct: 417 VLSACSHAGLVDEGLRYFRLMTSYYNVAPDRDIYACVVDLLSRAGRVKEAYELIENMPFK 476
Query: 310 PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMR 369
P S+ ALL C + + + + K++E++P++ G YV LSN A W S+R
Sbjct: 477 PDESIWVALLGACKKYKQPSIQKLAALKVLEMKPNKAGTYVLLSNFSAAEGNWADFASLR 536
Query: 370 EAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+ M KK G S++E+ + F+ D S++++ +L ++ MK
Sbjct: 537 KLMRSTKSKKEVGRSWIELKNQVCSFIVGDIFDSSNKEVCEVLELLIRHMK 587
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 150/332 (45%), Gaps = 41/332 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYE-SDRFVSNSLIHMYSSFR 59
MLR GV P+ T + KA L G +HG K G + S +V N+L+ MY++
Sbjct: 98 MLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGLAIKIGTQGSSIYVDNALMDMYATC- 156
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
C + AR VF+ + ++ +SW+ LI GY
Sbjct: 157 -----------------------------CDSMDNARLVFEDIGTKNAVSWTTLITGYTH 187
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ D L VF +M + + + + + ACA +G+ + G+ +H VI++ L +
Sbjct: 188 RRDAFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPV 247
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+++DMY +C EA +F G M D WN++I GF ESL +FS+M
Sbjct: 248 MNAILDMYCRCRCASEAKQLF--GEMTQKDTITWNTLIAGFETLD-SYESLCIFSQMVSE 304
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
G P+ T+ ++++ACA+ ++ + G+ E ++D+ A+ G VA++
Sbjct: 305 GFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGNVADS 364
Query: 300 YQFLCQIP----IQPTASMLGALLNGCMNHGK 327
++ + + T+ M+G G HGK
Sbjct: 365 HKIFSGMRHTNLVSWTSMMIGY---GAHGHGK 393
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/257 (28%), Positives = 122/257 (47%), Gaps = 41/257 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G P+ TF + A A L G +HG I G +++ +SN+LI MY+ +
Sbjct: 301 MVSEGFSPNCFTFTSVIAACANLAILYCGQQLHGGIIHRGLDNNLELSNALIDMYAKCGN 360
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ++ K+F G+ NLVSW SM+ GY
Sbjct: 361 VADSHKIFSGMRHTNLVSWTSMMIGYGA-------------------------------H 389
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG----RMMHHYVIDNELPLT 176
G EA+ +F EM SG KP+++ ++VL AC+H G +D+G R+M Y N P
Sbjct: 390 GHGKEAVDLFNEMVGSGIKPDKIVFMAVLSACSHAGLVDEGLRYFRLMTSYY--NVAP-D 446
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ +VD+ ++ G ++EA + + KP D IW +++G AC + S+ + +
Sbjct: 447 RDIYACVVDLLSRAGRVKEAYELIENMPFKP-DESIWVALLG--ACKKYKQPSIQKLAAL 503
Query: 237 HIVGVKPDEITYLNLLS 253
++ +KP++ LLS
Sbjct: 504 KVLEMKPNKAGTYVLLS 520
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 117/268 (43%), Gaps = 12/268 (4%)
Query: 56 SSFRDIP-----NARKVFDGIPV--KNLVSWNS-MLDGYAKCGDISMARQVFDLMPEQDV 107
++FR IP + R + + P K+L + ++ Y G A +FD MP +DV
Sbjct: 13 TNFRPIPFSVQNSLRCIQNDTPFNPKDLTGLTTDLIKSYFDKGSFEEAHTLFDEMPHRDV 72
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
++W+ +I GY + A VF M G KPN T+ +VL AC L AL G+++H
Sbjct: 73 IAWTSMITGYTSCNHHSRAWNVFTNMLRDGVKPNAFTVSAVLKACKSLKALLCGKLVHGL 132
Query: 168 VID-NELPLTLVLRTSLVDMYAK-CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
I ++ + +L+DMYA C ++ A VF + + W ++I G+
Sbjct: 133 AIKIGTQGSSIYVDNALMDMYATCCDSMDNARLVFED--IGTKNAVSWTTLITGYTHRRD 190
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
L +F +M + + ++ +SACA G + +G
Sbjct: 191 AFGGLRVFRQMFMEEGELSPFSFSIAVSACASIGSSNLGKQVHAAVINHGFESNLPVMNA 250
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQPTAS 313
++D+ R +EA Q ++ + T +
Sbjct: 251 ILDMYCRCRCASEAKQLFGEMTQKDTIT 278
>IMGA|Medtr8g089650.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 19318857-19321074 E
EGN_Mt090430 20090702
Length = 672
Score = 228 bits (581), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 131/388 (33%), Positives = 211/388 (54%), Gaps = 3/388 (0%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV+ D + S+ LL EL +H + K G D V+++L+ YS +
Sbjct: 286 MRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTLLDAYSKCQH 345
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
++ K+F + V + + N+M+ Y CG + A++VF+ MP + ++SW+ ++ G +
Sbjct: 346 PHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNSMPNKTLISWNSILVGLTQN 405
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL F M K ++ + SV+ ACA +L+ G + I L ++
Sbjct: 406 ACPSEALDTFSMMNKLDVKMDKFSFASVISACAIKSSLELGEQLFGKAITLGLESDQIIC 465
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLVD Y KCG ++ VF G++K +V WN+M+ G+A +G E+L LF+EM G
Sbjct: 466 TSLVDFYCKCGLVEMGRKVF-DGMIKTDEV-SWNTMLMGYATNGYGIEALTLFNEMGYSG 523
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
V+P IT+ +LSAC H GLV+E F + + + P EHY+CMVD+ AR G EA
Sbjct: 524 VRPSAITFTGILSACDHCGLVEEGRDLFRTMKHDYDINPGIEHYSCMVDLFARVGCFGEA 583
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ ++P Q A+M ++L GC++HG + + K+I+L+P G Y+ LSN+ A
Sbjct: 584 MYLIEEMPFQADANMWLSVLRGCVSHGNKTIGKMAAEKIIQLDPGNSGAYIQLSNILATS 643
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVE 387
W+ + +RE M V+K PG S+++
Sbjct: 644 EDWEGSAEVRELMRNKNVQKIPGCSWMD 671
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 35/284 (12%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHG--YITKAGYESDRFVSNSLIHMYSSFRDIPN 63
V D + A A L + G +H +I +E D+ + +S+++ Y D+ +
Sbjct: 157 VHRDAFVLSTVFGACADLFALDCGKQVHARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDS 216
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
A +V + + S ++++ GYA G +S AR+VFD + + W+ +I GYV G+
Sbjct: 217 AARVVGFVKEVDDFSLSALVSGYANAGRMSDARKVFDNKVDPCSVLWNSIISGYVSNGEE 276
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EALA+F +MR +G + + ++L + L ++ + MH + +V+ ++L
Sbjct: 277 MEALALFNKMRRNGVWGDFSAVANILSISSSLLNVELVKQMHDHAFKIGATHDIVVASTL 336
Query: 184 VDMYAK-------------------------------CGAIQEALHVFRSGLMKPSDVFI 212
+D Y+K CG +++A VF S M +
Sbjct: 337 LDAYSKCQHPHDSCKLFHELKVYDAILLNTMITVYCNCGRVEDAKEVFNS--MPNKTLIS 394
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
WNS++ G + E+LD FS M+ + VK D+ ++ +++SACA
Sbjct: 395 WNSILVGLTQNACPSEALDTFSMMNKLDVKMDKFSFASVISACA 438
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 136/294 (46%), Gaps = 44/294 (14%)
Query: 20 SACLLKRELGLAIHGYITKAG-YESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS 78
S C RE +H + K G S +N L+ +YS + +A K+FD +P N S
Sbjct: 5 SVCRTIRE-ARQLHLSLLKTGNLHSSVITTNRLLQLYSRRGSLHDASKLFDEMPQPNPFS 63
Query: 79 WNSMLDGY-------------------------------AKCGDISMARQVFDLMPEQDV 107
WN++++ + +K GD+ A+ +F+ MP ++
Sbjct: 64 WNTLIEAHINLGHRNKSLELFHAMPHKTHYSWNLIVSTLSKSGDLQQAQALFNAMPMKNP 123
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP---NEVTMVSVLCACAHLGALDKGRMM 164
L W+ +I GY R G +L +F+EM + + + + +V ACA L ALD G+ +
Sbjct: 124 LVWNSMIHGYSRHGYPRNSLLLFKEMNLDPLETVHRDAFVLSTVFGACADLFALDCGKQV 183
Query: 165 HHYV-IDN-ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFAC 222
H V ID E VL +S+V+ Y KCG + A V G +K D F ++++ G+A
Sbjct: 184 HARVFIDGFEFEQDKVLCSSIVNFYGKCGDLDSAARVV--GFVKEVDDFSLSALVSGYAN 241
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
G + ++ +F V P + + +++S G EA F+ + +NG+
Sbjct: 242 AGRMSDARKVFDN----KVDPCSVLWNSIISGYVSNGEEMEALALFNKMRRNGV 291
>IMGA|Medtr4g115870.1 WD-40 repeat; Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 26953042-26955144 H
EGN_Mt090430 20090702
Length = 700
Score = 227 bits (579), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 124/311 (39%), Positives = 179/311 (57%), Gaps = 4/311 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
NS++D YAKCG I A VF ++DV+SW+ +I GY + G EAL +F MR+
Sbjct: 380 NSLVDMYAKCGLIPDAHYVFATTVDKDVVSWNSVISGYAQSGSAYEALDLFNRMRMESFL 439
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLTLVLRTSLVDMYAKCGAIQEALH 198
P+ VT+V VL ACA +GA G +H + + L ++ + T+L++ YAKCG A
Sbjct: 440 PDAVTVVGVLSACASVGAHQIGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARM 499
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF M + W +MIGG G SL LF +M + P+E+ + LL+AC+H
Sbjct: 500 VFDG--MGEKNAVTWAAMIGGCGMQGDGVGSLALFRDMLKEELVPNEVVFTTLLAACSHS 557
Query: 259 GLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGA 317
G+V+E FD + K P +HYACMVD++ARAG + EA F+ ++P+QP + GA
Sbjct: 558 GMVEEGLMIFDFMCKELNFVPSMKHYACMVDLLARAGNLQEALDFIDKMPVQPGVGVFGA 617
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
L+GC H D E R+++EL P Q YV +SN+YA RW + +RE +++ G+
Sbjct: 618 FLHGCGLHSNFDFGEVAIRRMLELHPDQACYYVLISNLYASDGRWGMVKEVREMIKQRGL 677
Query: 378 KKSPGYSFVEM 388
K PG S VEM
Sbjct: 678 NKVPGVSLVEM 688
Score = 134 bits (336), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 139/271 (51%), Gaps = 8/271 (2%)
Query: 37 TKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS---WNSMLDGYAKCGDIS 93
T G +D V + L+ S RDI K+ I N S++D Y+KCG +
Sbjct: 127 TTLGSFNDLVVFSILLKTASQLRDIVLTTKLHCNILKSNAADSFVLTSLVDAYSKCGKLR 186
Query: 94 MARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA 153
AR+VFD +P++ V+SW+ +I YV+ +E L +F MR N T+ S++ AC
Sbjct: 187 DARKVFDEIPDRSVVSWTSMIVAYVQNECAEEGLMLFNRMREGFLDGNVFTVGSLVTACT 246
Query: 154 HLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR----SGLMKPSD 209
LG L +G+ +H YVI N + + L TSL++MY KCG I +A VF S D
Sbjct: 247 KLGCLHQGKWVHGYVIKNGIEINSYLATSLLNMYVKCGDIGDARSVFDEFSVSTCGGGDD 306
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
+ W +MI G+ G + +L+LF++ + P+ +T +LLSACA +
Sbjct: 307 LVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNSVTLASLLSACAQLENIVMGKLLHV 366
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ K G+ S + +VD+ A+ G + +A+
Sbjct: 367 LVVKYGLDDTSLRNS-LVDMYAKCGLIPDAH 396
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/305 (31%), Positives = 144/305 (47%), Gaps = 42/305 (13%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G +HGY+ K G E + +++ SL++MY K
Sbjct: 254 GKWVHGYVIKNGIEINSYLATSLLNMY-------------------------------VK 282
Query: 89 CGDISMARQVFDLMPEQ------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
CGDI AR VFD D++ W+ +I GY ++G AL +F + + PN
Sbjct: 283 CGDIGDARSVFDEFSVSTCGGGDDLVFWTAMIVGYTQRGYPQAALELFTDKKWYRILPNS 342
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
VT+ S+L ACA L + G+++H V+ L T LR SLVDMYAKCG I +A +VF +
Sbjct: 343 VTLASLLSACAQLENIVMGKLLHVLVVKYGLDDT-SLRNSLVDMYAKCGLIPDAHYVFAT 401
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVK 262
+ K DV WNS+I G+A G E+LDLF+ M + PD +T + +LSACA G +
Sbjct: 402 TVDK--DVVSWNSVISGYAQSGSAYEALDLFNRMRMESFLPDAVTVVGVLSACASVGAHQ 459
Query: 263 EAWYFFDCLGKNGMTPKSEHY-ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNG 321
K G+ S + +++ A+ G A + + A A++ G
Sbjct: 460 IGLSLHGFALKYGLVSSSIYVGTALLNFYAKCGDATSARMVFDGMG-EKNAVTWAAMIGG 518
Query: 322 CMNHG 326
C G
Sbjct: 519 CGMQG 523
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 130/266 (48%), Gaps = 46/266 (17%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
PD +T + A A + ++GL++HG+ K G VS+S
Sbjct: 439 LPDAVTVVGVLSACASVGAHQIGLSLHGFALKYG-----LVSSS---------------- 477
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
++ G ++L+ YAKCGD + AR VFD M E++ ++W+ +I G +GD +
Sbjct: 478 IYVG---------TALLNFYAKCGDATSARMVFDGMGEKNAVTWAAMIGGCGMQGDGVGS 528
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSLV 184
LA+F +M PNEV ++L AC+H G +++G M+ ++ EL ++ +V
Sbjct: 529 LALFRDMLKEELVPNEVVFTTLLAACSHSGMVEEGLMIFDFMC-KELNFVPSMKHYACMV 587
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI---VGV 241
D+ A+ G +QEAL ++P V ++ + + G H + D F E+ I + +
Sbjct: 588 DLLARAGNLQEALDFIDKMPVQPG-VGVFGAFLHGCGLH----SNFD-FGEVAIRRMLEL 641
Query: 242 KPDEITYL----NLLSACAHGGLVKE 263
PD+ Y NL ++ G+VKE
Sbjct: 642 HPDQACYYVLISNLYASDGRWGMVKE 667
>IMGA|Medtr2g007690.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 1211532-1209412 H
EGN_Mt090430 20090702
Length = 558
Score = 226 bits (575), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 128/451 (28%), Positives = 226/451 (50%), Gaps = 66/451 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ P TF + A + G +H + ++G+ ++ V +L+ MY+
Sbjct: 106 MHQKGILPSGFTFSLVLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGH 165
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCG------------------------------ 90
+ +AR VFDGI +++V+W +M+ GYAK G
Sbjct: 166 VCDARDVFDGIVDRDVVAWTAMICGYAKAGRMVDARFLFDNMGERNSFTWTTMVAGYANY 225
Query: 91 -DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE----------------- 132
D+ A +++D+M +D ++W +I GY + G+ EA +F+E
Sbjct: 226 GDMKAAMELYDVMNGKDEVTWVAMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALLACY 285
Query: 133 ---------------MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
MR + K +V MV + ACA L + + + + + T
Sbjct: 286 AQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRMSNSLTYNIEEGFCEKTH 345
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
++ +L+ M +KCG I A F +M+ D++ +++MI FA HG ++++DLF +M
Sbjct: 346 IVSNALIHMQSKCGNIDLAWREF--NIMRNRDLYTYSAMIAAFAEHGKSQDAIDLFLKMQ 403
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQV 296
G+KP+++T++ +L+AC+ GL++E FF + + G+ P EHY CMVD++ RAGQ+
Sbjct: 404 QEGLKPNQVTFVGVLNACSTSGLIEEGCRFFQIMTEMYGIEPLPEHYTCMVDLLGRAGQL 463
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
+AY + + A+ G+LL C +G ++L E R L E++P G YV L+N Y
Sbjct: 464 EKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLFEIDPTDSGNYVLLANTY 523
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
A +W+ A +++ M + G+KK GYS+++
Sbjct: 524 ASNDKWECAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 14/236 (5%)
Query: 87 AKCGDISMARQVFDLMPE-QDVLSWSCLIDGYV-RKGDYDEALAVFEEMRVSGPKPNEVT 144
A+ ++ A ++FD MP + W+ LI ++ + ++ F M G P+ T
Sbjct: 58 AEKSNLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFCHCISTFARMHQKGILPSGFT 117
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
VL AC + A +G+ +H ++ + +++T+L+DMYAKCG + +A VF G+
Sbjct: 118 FSLVLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDARDVF-DGI 176
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+ DV W +MI G+A G + ++ LF M + + T+ +++ A+ G +K A
Sbjct: 177 VD-RDVVAWTAMICGYAKAGRMVDARFLFDNMG----ERNSFTWTTMVAGYANYGDMKAA 231
Query: 265 WYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+D + GK+ +T + M+ + G V+EA + +I + S ALL
Sbjct: 232 MELYDVMNGKDEVT-----WVAMIAGYGKLGNVSEARRIFDEITVPWNPSTCAALL 282
>IMGA|Medtr7g089550.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 19731249-19733516 H
EGN_Mt090430 20090702
Length = 755
Score = 225 bits (574), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 122/397 (30%), Positives = 214/397 (53%), Gaps = 18/397 (4%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
E+G +HG + G SD ++ +SL+ MY + A + +P+ L N +
Sbjct: 283 EVGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGV--- 339
Query: 87 AKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMV 146
C + P+ ++SWS ++ GYV G Y++ + F M + T+
Sbjct: 340 -TCKE-----------PKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVA 387
Query: 147 SVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK 206
+++ ACA+ G L+ G+ +H Y+ L + + +SL+DMY+K G++ +AL +F +K
Sbjct: 388 TIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYSKSGSLDDALMIFEQ--IK 445
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
+V +W SMI G A HG KE++ LF M +G+ P+E+T++ +L+AC+H GL++E
Sbjct: 446 EPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCR 505
Query: 267 FFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
+F + + P+ EHY MV++ RAG + EA F+ + I S+ + L+ C H
Sbjct: 506 YFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSISHFTSVWRSFLSSCRLH 565
Query: 326 GKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSF 385
++ ++V L++ P Y+ LSN+ + +WD+A +R M + GVKK PG S+
Sbjct: 566 KNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVRSLMYQRGVKKQPGQSW 625
Query: 386 VEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
V++ +H F D+SHP ++IY L ++ ++K I
Sbjct: 626 VQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEI 662
Score = 130 bits (328), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 163/337 (48%), Gaps = 15/337 (4%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G P+ T + K + + G IH +I + G D + NS++ +Y ++ A
Sbjct: 129 GACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYA 188
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
F+ + K++VSWN M+ Y + GD+ + ++F P +DV+SW+ +IDG ++ G
Sbjct: 189 ESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYER 248
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL M G + + VT L + L ++ GR +H V+ L +R+SLV
Sbjct: 249 LALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFGLNSDGYIRSSLV 308
Query: 185 DMYAKCGAIQEA--------LHVFRSG-----LMKPSDVFI-WNSMIGGFACHGLVKESL 230
+MY KCG + +A L+ R G +P + W+SM+ G+ +G ++ +
Sbjct: 309 EMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGM 368
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
F M + D T ++SACA+ G+++ + K G+ + + ++D+
Sbjct: 369 KTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMY 428
Query: 291 ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+++G + +A QI +P + ++++GC HG+
Sbjct: 429 SKSGSLDDALMIFEQIK-EPNVVLWTSMISGCALHGQ 464
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 99/189 (52%), Gaps = 7/189 (3%)
Query: 50 SLIHMYSSFRDIPNARKV----FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
S +H +S P+ R + F ++ L S N +L Y K ++ A ++FD + +
Sbjct: 37 SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96
Query: 106 DVLSWSCLIDGYVRK-GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM 164
+ +W+ LI G+ R G + ++F EM+ G PN+ T+ SVL C+ + G+ +
Sbjct: 97 NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGI 156
Query: 165 HHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
H +++ N + +VL S++D+Y KC + A F LM DV WN MIG + G
Sbjct: 157 HAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFE--LMIEKDVVSWNIMIGAYLREG 214
Query: 225 LVKESLDLF 233
V++SL++F
Sbjct: 215 DVEKSLEMF 223
>IMGA|Medtr5g022670.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 8861216-8859441 E
EGN_Mt090430 20090702
Length = 591
Score = 225 bits (573), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 138/438 (31%), Positives = 223/438 (50%), Gaps = 28/438 (6%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
L++G F + TF L A + + + G HG K G + V NSL HMY S +
Sbjct: 129 LKIGFFANSYTFVSLISACSKMSCVDNGKMCHGQAVKNGVDFVLPVENSLAHMYGSCGYV 188
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
AR +FDG+ ++LVSWNSM+DGY K GD+S A ++FD+MPE+++++W+CLI GY +
Sbjct: 189 EVARVMFDGMVSRDLVSWNSMIDGYVKVGDLSAAHKLFDVMPERNLVTWNCLISGYSKGR 248
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
+ AL +F EM + N TMV + AC G L +G+ +H +I + +L+L T
Sbjct: 249 NPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEGKSVHGSMIRLFMRSSLILDT 308
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM----- 236
+L+DMY KCG ++ A VF M ++ WN+MI G HG ++ L LF M
Sbjct: 309 ALIDMYCKCGRVEAASKVFER--MSSRNLVSWNAMILGHCIHGNPEDGLSLFDLMVGMER 366
Query: 237 ---------------HIVGVKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKS 280
+V + PDEIT++ +L ACA L+ E YF + G+ P
Sbjct: 367 VKGEVEVDESSSADRGLVRLLPDEITFIGILCACARAELLSEGRSYFKQMIDVFGLKPNF 426
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIP-----IQPTASMLGALLNGCMNHGKLDLAETVG 335
H+ CM +++A G + EA + L + I + + +LL C + L E +
Sbjct: 427 AHFWCMANLLANVGLIDEAEECLKNMAKFDGYISHESLLWASLLGLCRFKRDVYLGEQIA 486
Query: 336 RKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRF 395
+ LI+ +P+ Y L +YA+ +W+ +++ M+ + PG + V++ +H F
Sbjct: 487 KLLIDTDPNNLAYYQFLLIIYAVAAQWENVSRVQKLMKERKLDIIPGSNLVDLKNIVHNF 546
Query: 396 VAHDKSHPSSEQIYMMLG 413
+ E + +M+
Sbjct: 547 KVSNNWREGIEAVNIMMN 564
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/295 (22%), Positives = 119/295 (40%), Gaps = 41/295 (13%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
F HL F L + S C L L I + + + + F+S +L+ S+ +
Sbjct: 33 FLTHLHFQSLLQPSHCQTTHHL-LQIQSLLITSSFYRNPFLSRTLLSRASNLCTVDFTFL 91
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
+F +N+ LD + C + + +P + ++ +
Sbjct: 92 IFH--------HFNNPLDTF--CVNTVINSYCNSYVPHKAIVFY---------------- 125
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
F +++ G N T VS++ AC+ + +D G+M H + N + L + SL M
Sbjct: 126 ---FSSLKI-GFFANSYTFVSLISACSKMSCVDNGKMCHGQAVKNGVDFVLPVENSLAHM 181
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE- 245
Y CG ++ A +F M D+ WNSMI G+ G DL + + V P+
Sbjct: 182 YGSCGYVEVARVMFDG--MVSRDLVSWNSMIDGYVKVG------DLSAAHKLFDVMPERN 233
Query: 246 -ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+T+ L+S + G A F +G+ + + C V R+G++ E
Sbjct: 234 LVTWNCLISGYSKGRNPGYALKLFREMGRLRIRENARTMVCAVTACGRSGRLKEG 288
>IMGA|Medtr3g147780.1 Calcium-binding EF-hand
chr03_pseudomolecule_IMGAG_V3 38358531-38363826 E
EGN_Mt090430 20090702
Length = 729
Score = 224 bits (571), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 199/365 (54%), Gaps = 34/365 (9%)
Query: 28 LGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA 87
+G HGY K+G +D V+N LI +YS F +I A +F
Sbjct: 371 IGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAALSLF------------------- 411
Query: 88 KCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+D M E+ +++W+ +I G V+ G +A+ +F EM + G KP+ +T+ S
Sbjct: 412 -----------YD-MREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIAS 459
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP 207
+L C LG L G +H Y++ N + + + T+L+DMY+KCG + A VF + +K
Sbjct: 460 LLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGRLDYAEKVFYN--IKD 517
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
+ WN++I G++ +GL + +S++ G+KPD+IT+L +L+AC HGGLV +
Sbjct: 518 PCLATWNAIISGYSLYGLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLGLEY 577
Query: 268 FDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
F+ + K G+ P +HYAC+V ++ + G EA +F+ ++ IQP +++ GALLN C
Sbjct: 578 FNIMTKEYGLMPSLQHYACIVALLGKEGLFKEAIEFINKMEIQPDSAVWGALLNACCIQR 637
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
++ L E + +KL L G YV +SN+YAI RWD +RE M+ G G S +
Sbjct: 638 EVKLGECLAKKLFLLNHKNGGFYVLMSNLYAIVGRWDDVARVREMMKDSGGDGCSGVSVI 697
Query: 387 EMHGA 391
++ A
Sbjct: 698 DVISA 702
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/331 (28%), Positives = 151/331 (45%), Gaps = 21/331 (6%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMY---SSFRDIPN-----ARKVFDGIPVKNLVSW- 79
L I I +A + F + LI Y SF P+ AR++ + + +
Sbjct: 32 ALVIFRQILQANVNPNEFTFSLLIKAYLSSPSFTHCPSTAALQARQIQTQCLKRGVNQFI 91
Query: 80 ---NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
S++D Y K G S AR +FD M +DV+SW+ LI GY + G A+ +F +M
Sbjct: 92 HVHTSLIDLYMKLGFTSHARNMFDQMSYRDVVSWNVLICGYSQNGYLYHAIQLFVDMLRE 151
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
KPN+ T+VS+L +C + +GR +H + I L L +L+ MYAKC ++ +
Sbjct: 152 NFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMYAKCDDLEAS 211
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+F M V WN+MIG + +GL +++ F EM G P +T +NL+SA A
Sbjct: 212 QLLFDE--MDEKSVVSWNTMIGVYGQNGLFDKAILYFKEMLKEGFHPSSVTIMNLVSANA 269
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
V Y C G T + +V + A+ G A Q P + + L
Sbjct: 270 FPENVH--CYVVKC----GFTNDASVVTSLVCLYAKQGFTNTAKQLYKYYPTKDLIT-LT 322
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
A+++ G ++ A + I+L+ D
Sbjct: 323 AIISSYSEKGDIESAVECFIQTIQLDIKPDA 353
Score = 98.2 bits (243), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 86/368 (23%), Positives = 156/368 (42%), Gaps = 73/368 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
MLR P+ T L + C G +IHG+ KAG+ D ++N+L+ MY
Sbjct: 148 MLRENFKPNQTTIVSLLPSCGCFELIFQGRSIHGFGIKAGFGLDSHLNNALMSMY----- 202
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
AKC D+ ++ +FD M E+ V+SW+ +I Y +
Sbjct: 203 --------------------------AKCDDLEASQLLFDEMDEKSVVSWNTMIGVYGQN 236
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +D+A+ F+EM G P+ VT+++++ A A +H YV+ +
Sbjct: 237 GLFDKAILYFKEMLKEGFHPSSVTIMNLVSANAF------PENVHCYVVKCGFTNDASVV 290
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
TSLV +YAK G A +++ K D+ ++I ++ G ++ +++ F + +
Sbjct: 291 TSLVCLYAKQGFTNTAKQLYKYYPTK--DLITLTAIISSYSEKGDIESAVECFIQTIQLD 348
Query: 241 VKPDEITYLNLLS----------ACAHGGLVKEAWYFFDCLGKNGMTPKSEHY------- 283
+KPD + + +L C G ++ DCL NG+ +
Sbjct: 349 IKPDAVALIGVLHGITNPSHFAIGCTFHGYGVKSGLSNDCLVANGLISLYSRFDEIEAAL 408
Query: 284 --------------ACMVDVMARAGQVAEAYQFLCQIPI---QPTASMLGALLNGCMNHG 326
M+ +AG+ ++A + ++ + +P A + +LL+GC G
Sbjct: 409 SLFYDMREKPLITWNSMISGCVQAGKSSDAMELFSEMSMCGKKPDAITIASLLSGCCQLG 468
Query: 327 KLDLAETV 334
L + ET+
Sbjct: 469 NLRIGETL 476
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 87/221 (39%), Gaps = 35/221 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD +T L L +G +H YI + + F+ +LI MYS
Sbjct: 445 MSMCGKKPDAITIASLLSGCCQLGNLRIGETLHSYILRNNVRVEDFIGTALIDMYSKCGR 504
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A KVF I L +WN+ +I GY
Sbjct: 505 LDYAEKVFYNIKDPCLATWNA-------------------------------IISGYSLY 533
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G A + +++ G KP+++T + VL AC H G + G + + ++ E L L+
Sbjct: 534 GLEHTAFGCYSKLQEQGLKPDKITFLGVLAACTHGGLVYLG-LEYFNIMTKEYGLMPSLQ 592
Query: 181 --TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
+V + K G +EA+ ++P D +W +++
Sbjct: 593 HYACIVALLGKEGLFKEAIEFINKMEIQP-DSAVWGALLNA 632
>IMGA|Medtr8g148290.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 36658754-36660770 E
EGN_Mt090430 20090702
Length = 573
Score = 224 bits (571), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 112/348 (32%), Positives = 205/348 (58%), Gaps = 4/348 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E + F +++ Y+++ D+ A +++D + K V+W +M+ GY K G++S AR++FD
Sbjct: 209 ERNSFTWTTMVAGYANYGDMKAAMELYDVMNGKEEVTWVAMIAGYGKLGNVSEARRIFDE 268
Query: 102 MP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+P + + + L+ Y + G EA+ ++E+MR + K +V MV + ACA L +
Sbjct: 269 IPVPLNPSTCAALLACYAQNGHAREAIEMYEKMRRAKIKVTDVAMVGAISACAQLRDIRM 328
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
++ + + + T ++ +L+ M +KCG I A F +M+ D++ +++MI F
Sbjct: 329 SNLLTYDIEEGFCEKTHIVSNALIHMQSKCGNIDLAWREF--NIMRNRDLYTYSAMIAAF 386
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPK 279
A HG ++++DLF +M G+ P+++T++ +L+AC+ GL++E FF + G G+ P
Sbjct: 387 AEHGKSQDAIDLFLKMQQEGLTPNQVTFVGVLNACSTSGLIEEGCRFFQIMTGVYGIEPL 446
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
EHY CMVD++ RAGQ+ +AY + + A+ G+LL C +G ++L E R L
Sbjct: 447 PEHYTCMVDLLGRAGQLEKAYSLIKENSTSADATTWGSLLAACRVYGNVELGEIAARHLF 506
Query: 340 ELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVE 387
E++P G YV L+N YA +W++A +++ M + G+KK GYS+++
Sbjct: 507 EIDPTDSGNYVLLANTYASNDKWERAEEVKKLMSKKGMKKPSGYSWIQ 554
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 117/236 (49%), Gaps = 14/236 (5%)
Query: 87 AKCGDISMARQVFDLMPE-QDVLSWSCLIDGYV-RKGDYDEALAVFEEMRVSGPKPNEVT 144
A+ ++ A ++FD MP + W+ LI ++ + ++ F M G P+ T
Sbjct: 58 AEKSNLYYAHKLFDTMPNCSNCFIWTSLIRAFLSHHTHFRHCISTFAIMHQKGILPSGFT 117
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
SVL AC + A+ +G+ +H ++ + +++T+L+DMYAKCG + +A VF
Sbjct: 118 FSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDARDVFDG-- 175
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
M DV W +MI G+A G + ++ LF M + + T+ +++ A+ G +K A
Sbjct: 176 MVDRDVVAWTAMICGYAKAGRMVDARLLFDNMG----ERNSFTWTTMVAGYANYGDMKAA 231
Query: 265 WYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+D + GK +T + M+ + G V+EA + +IP+ S ALL
Sbjct: 232 MELYDVMNGKEEVT-----WVAMIAGYGKLGNVSEARRIFDEIPVPLNPSTCAALL 282
>IMGA|Medtr3g031510.1 Asp/Glu racemase chr03_pseudomolecule_IMGAG_V3
8887186-8891311 E EGN_Mt090430 20090702
Length = 913
Score = 224 bits (570), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 133/387 (34%), Positives = 203/387 (52%), Gaps = 35/387 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD T L A A + +LG +HG I K+G+ESD IH+
Sbjct: 496 GILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESD-------IHV---------- 538
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE-QDVLSWSCLIDGYVRKGDY 123
KV +++D YAKCG + ++F L +D +SW+ +I GY+ G
Sbjct: 539 -KV-------------ALMDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYS 584
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+EA++ F M++ +PN VT V++L A ++L L + H +I ++ SL
Sbjct: 585 NEAISTFRRMKLENVRPNLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSL 644
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+DMYAKCG ++ + F M+ D WN+M+ +A HG + ++ LFS M V+
Sbjct: 645 IDMYAKCGQLRYSEKCFHE--MENKDTISWNAMLSAYAMHGQGELAVALFSVMQESNVRV 702
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D ++Y+++LSAC H GL++E W F + K+ + P EHYACMVD++ AG E
Sbjct: 703 DSVSYISVLSACRHSGLIQEGWDIFASMCEKHHVEPSMEHYACMVDLLGCAGLFDEVLSL 762
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
L ++ +P A + GALL C H + L E L++LEP +V LS++YA RW
Sbjct: 763 LNKMTTEPDARVWGALLAACKIHSNVTLGEVAVHHLLKLEPRNPVHHVVLSDIYAQCGRW 822
Query: 363 DKARSMREAMERMGVKKSPGYSFVEMH 389
+ AR R + G+KK PGYS+V H
Sbjct: 823 NDARRTRSHINNHGLKKIPGYSWVGAH 849
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 35/328 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD L + LG +H Y KA ESD + +L+ MY F A
Sbjct: 395 GLKPDKAILSILVSGCTEISNIGLGKIMHCYAIKADMESDISMVTTLVSMYIRFELFTYA 454
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
+F+ + +K++V WN++++G+ K GD +
Sbjct: 455 MTLFNRMQIKDIVVWNTLINGFTKYGDPHL------------------------------ 484
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL +F +++SG P+ TMV + ACA + LD G +H + + + ++ +L+
Sbjct: 485 -ALEMFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFESDIHVKVALM 543
Query: 185 DMYAKCGAIQEALHVFRSGLMK-PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
DMYAKCG++ +F L K D WN MI G+ +G E++ F M + V+P
Sbjct: 544 DMYAKCGSLCSVERLFL--LTKHVKDEVSWNVMIAGYLHNGYSNEAISTFRRMKLENVRP 601
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ +T++ +L A ++ +++EA F C+ + G + ++D+ A+ GQ+ + +
Sbjct: 602 NLVTFVTILPAVSYLSILREAMAFHTCIIRMGFLSCTLIGNSLIDMYAKCGQLRYSEKCF 661
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLA 331
++ + T S A+L+ HG+ +LA
Sbjct: 662 HEMENKDTISW-NAMLSAYAMHGQGELA 688
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 107/405 (26%), Positives = 185/405 (45%), Gaps = 19/405 (4%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL--VSWNSMLDGYAKCGDISMARQ 97
G+E D+ +L S D+ + + + +++ V NS++D Y KCGD+ A++
Sbjct: 195 GFEVDKVSILNLAPAVSRLGDVGCCKSIHGYVVRRSICGVVSNSLIDMYCKCGDVHSAQR 254
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA 157
VFD M +D +SW+ ++ GYV+ G Y E L + +MR K N+V +V+ L A +
Sbjct: 255 VFDRMGVRDDVSWATMMAGYVKNGCYFEGLQLLHKMRRGNVKMNKVAVVNALLVVAEMRD 314
Query: 158 LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
L+KG+ +++Y + L +V+ T +V MYAKCG +++A +F S ++ D+ W++ +
Sbjct: 315 LEKGKEIYNYALQMGLMSDIVVATPIVCMYAKCGELKKARELFLS--LEGRDLVAWSAFL 372
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC---AHGGLVKEAWYFFDCLG-K 273
G +E L +F M G+KPD+ L+S C ++ GL K C K
Sbjct: 373 SALVETGYPREVLSIFQVMQYEGLKPDKAILSILVSGCTEISNIGLGK----IMHCYAIK 428
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA-E 332
M +V + R A ++ I+ + L+NG +G LA E
Sbjct: 429 ADMESDISMVTTLVSMYIRFELFTYAMTLFNRMQIKDIV-VWNTLINGFTKYGDPHLALE 487
Query: 333 TVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGAL 392
R + G VGL + AI D + +E+ G + S + + AL
Sbjct: 488 MFNRLQLSGILPDSGTMVGLFSACAIMDDLDLGTCLHGGIEKSGFE-----SDIHVKVAL 542
Query: 393 HRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNEG 437
A S S E+++++ + ++ V + Y NE
Sbjct: 543 MDMYAKCGSLCSVERLFLLTKHVKDEVSWNVMIAGYLHNGYSNEA 587
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 117/265 (44%), Gaps = 17/265 (6%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQV---FDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
P++ + N L C I+ Q+ F + ++ ++ I Y + + +A+
Sbjct: 26 PIQQQNNNNHYLKLINSCKYINPLLQIHTHFLQIKNPSLILYNSFIKAYSKFHHFHKAIN 85
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
++ + G KP++ T VL AC +G ++ ++ N L + + TSL+DM+
Sbjct: 86 LYHTILKIGLKPDKFTFNFVLKACTSALDFHEGVNIYKDIVFNGLECDVYIGTSLIDMFC 145
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
K G + A +VF M D WN+MI G + E+L++F M + G + D+++
Sbjct: 146 KMGCLDNARNVFDK--MPVKDGVCWNAMISGLSQSLNPCEALEMFWRMQMEGFEVDKVSI 203
Query: 249 LNLLSACAHGGLV---KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
LNL A + G V K + G+ S ++D+ + G V A + +
Sbjct: 204 LNLAPAVSRLGDVGCCKSIHGYVVRRSICGVVSNS-----LIDMYCKCGDVHSAQRVFDR 258
Query: 306 IPIQPTAS----MLGALLNGCMNHG 326
+ ++ S M G + NGC G
Sbjct: 259 MGVRDDVSWATMMAGYVKNGCYFEG 283
>IMGA|Medtr7g134520.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 31793059-31791806 E
EGN_Mt090430 20090702
Length = 417
Score = 223 bits (568), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/353 (33%), Positives = 210/353 (59%), Gaps = 8/353 (2%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQ 97
K G+ S +S L++ Y F +A +FD +P ++ V+WN+M+ GY++ D+ ARQ
Sbjct: 62 KLGFTSHFHISTCLLNSYV-FLSFLDACILFDEMPQRDTVTWNTMILGYSRLEDVKKARQ 120
Query: 98 VFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLG 156
+FD MP +D++SW +I Y+ G Y ++L +F M V G KP++V VL CAH+
Sbjct: 121 LFDEMPHRDIVSWCNMISAYLNVGSYMQSLYLFRRMLFVEGIKPDQVIACLVLSGCAHVE 180
Query: 157 --ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWN 214
L G+ +H Y++ N L + + +LV+MYAK G ++ A V LM DV W
Sbjct: 181 RHGLLGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLRNAAMVLE--LMDERDVTSWT 238
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
MI G G KE+L +F +M + GVKP+E+T+ +LSACAHGG V++ +F + +
Sbjct: 239 LMICGAVRCGFNKEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIEEC 298
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
G+ P+ +HYAC+V ++ ++G + EAY+ + + ++P +LG+ L+ C H + ++AE V
Sbjct: 299 GLKPRVQHYACLVYLIGKSGMLEEAYEIIKMMKVEPDVVVLGSFLSACKEHKQFEIAEGV 358
Query: 335 GRKLIELEPHQD--GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSF 385
+++ + ++ G Y ++++Y I + ++A M++ + + ++++ G +F
Sbjct: 359 IEQVLRMAKPENYRGLYSLIADLYVIGDKSEEAERMKKLIIKEHLRQAKGLNF 411
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 118/262 (45%), Gaps = 53/262 (20%)
Query: 5 GVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
G+ PD + + A + + L G ++HGYI K G+E + + +L++MY+ +
Sbjct: 161 GIKPDQVIACLVLSGCAHVERHGLLGGKSVHGYIVKNGWELNVEIGAALVNMYAKGGVLR 220
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGD 122
NA V + + +++ SW M+ G +CG F+
Sbjct: 221 NAAMVLELMDERDVTSWTLMICGAVRCG--------FN---------------------- 250
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
EAL VFE+M++ G KPNE+T VL ACAH G ++ GR + + L +
Sbjct: 251 -KEALVVFEKMQMDGVKPNELTFTGVLSACAHGGFVEDGRRYFKMIEECGLKPRVQHYAC 309
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACH-------GLVKESL----- 230
LV + K G ++EA + + ++P DV + S + H G++++ L
Sbjct: 310 LVYLIGKSGMLEEAYEIIKMMKVEP-DVVVLGSFLSACKEHKQFEIAEGVIEQVLRMAKP 368
Query: 231 -------DLFSEMHIVGVKPDE 245
L ++++++G K +E
Sbjct: 369 ENYRGLYSLIADLYVIGDKSEE 390
>IMGA|Medtr3g097980.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 23612258-23614198 H
EGN_Mt090430 20090702
Length = 646
Score = 223 bits (567), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/465 (32%), Positives = 225/465 (48%), Gaps = 89/465 (19%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D TFP + KA C + LG IH YI K+G+ES + ++LI MYSS + + A
Sbjct: 188 GLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMYSSCKLLSEA 247
Query: 65 RKVFDGIPVKNLVS-----WNSMLDGYAKCGD---------------------------- 91
K+FD + VS WNSML G+ GD
Sbjct: 248 TKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFDFYTFSIVLK 307
Query: 92 -------ISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
+S+A QV + E D + S LID Y ++G + AL +FE + P
Sbjct: 308 ICMNFDNLSLASQVHGFVITSGYELDCVVGSILIDIYAKQGSINNALRLFERL----PDK 363
Query: 141 NEVTMVSVLCACAHLGALDK------------GRMMHHYVIDNEL--------------- 173
+ V S++ CA G+ DK G + H+VI L
Sbjct: 364 DVVAWSSLITGCARFGS-DKLAFSLFMDMIHLGLQIDHFVISIVLKACSSLASHQHGKQV 422
Query: 174 -PLTL--------VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
L L V+ T+L+DMYAKCG I++AL +F G + D W S+I G A +G
Sbjct: 423 HSLCLKKGYESEGVVTTALIDMYAKCGDIEDALSLF--GCLSEIDTMSWTSIIVGCAQNG 480
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHY 283
+E++ L +M G KP++IT L +L+AC H GLV+EAW F+ + N G+ P EHY
Sbjct: 481 RAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEHY 540
Query: 284 ACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
CMVD++ +AG+ EA + + ++P +P ++ +LL C + DLA V L+ P
Sbjct: 541 NCMVDILGQAGRFEEAVKLISEMPFKPDKTIWSSLLGACGTYKNRDLANIVAEHLLATSP 600
Query: 344 HQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
Y+ LSNVYA WD +RE ++++G KK G S++E+
Sbjct: 601 EDVSVYIMLSNVYAALGMWDSVSKVRETVKKIG-KKRAGKSWIEI 644
Score = 151 bits (381), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 104/347 (29%), Positives = 167/347 (48%), Gaps = 25/347 (7%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ + + KA + ELG +H +I +A + D + N+L+ MY + +A++V
Sbjct: 60 PNQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRV 119
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F IP KN SWN+++ GYAK G I A ++FD MPE D++SW+ +I G V AL
Sbjct: 120 FCEIPCKNATSWNTLILGYAKQGLIDDAMKLFDKMPEPDIVSWNSIIAGLVDNAS-SRAL 178
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
M G K +E T SVL AC L GR +H Y+I + + ++L+DMY
Sbjct: 179 RFVSMMHGKGLKMDEFTFPSVLKACGCSDELMLGREIHCYIIKSGFESSCYCISALIDMY 238
Query: 188 AKCGAIQEALHVFRSGLMKPS---DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+ C + EA +F S + +WNSM+ G +G E+L + S MH GV+ D
Sbjct: 239 SSCKLLSEATKIFDQYFRNSSVSESLALWNSMLSGHVVNGDYVEALSMISHMHRSGVRFD 298
Query: 245 EITYLNLLSACAH----------GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
T+ +L C + G V + Y DC+ + ++D+ A+ G
Sbjct: 299 FYTFSIVLKICMNFDNLSLASQVHGFVITSGYELDCVVG----------SILIDIYAKQG 348
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL 341
+ A + ++P + + +L+ GC G LA ++ +I L
Sbjct: 349 SINNALRLFERLPDKDVVAW-SSLITGCARFGSDKLAFSLFMDMIHL 394
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 57/184 (30%), Positives = 108/184 (58%), Gaps = 12/184 (6%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKP 140
M+ Y+KC I AR +FD MP ++++SW+ ++ EAL+++ EM S +P
Sbjct: 1 MISVYSKCSSIIDARNMFDEMPHRNIVSWTTMVSVLTNSSMPHEALSLYNEMIESKIEQP 60
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
N+ +VL AC + ++ G+M+H+++ +L + +VL +L+DMY KCG++++A VF
Sbjct: 61 NQFLYSAVLKACGLVRNVELGKMVHYHIFQAKLDVDIVLMNALLDMYVKCGSLRDAQRVF 120
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
+ + WN++I G+A GL+ +++ LF +M +PD +++ ++++ GL
Sbjct: 121 CE--IPCKNATSWNTLILGYAKQGLIDDAMKLFDKMP----EPDIVSWNSIIA-----GL 169
Query: 261 VKEA 264
V A
Sbjct: 170 VDNA 173
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 35/254 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ +G+ DH + KA + L + G +H K GYES+ V+ +LI MY+ D
Sbjct: 391 MIHLGLQIDHFVISIVLKACSSLASHQHGKQVHSLCLKKGYESEGVVTTALIDMYAKCGD 450
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A +F + + +SW S++ G A +
Sbjct: 451 IEDALSLFGCLSEIDTMSWTSIIVGCA-------------------------------QN 479
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVL 179
G +EA+++ +M SG KPN++T++ VL AC H G +++ + + + N L
Sbjct: 480 GRAEEAISLLHKMIESGTKPNKITILGVLTACRHSGLVEEAWDVFNSIETNHGLIPCPEH 539
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+VD+ + G +EA+ + KP D IW+S++G AC L H++
Sbjct: 540 YNCMVDILGQAGRFEEAVKLISEMPFKP-DKTIWSSLLG--ACGTYKNRDLANIVAEHLL 596
Query: 240 GVKPDEITYLNLLS 253
P++++ +LS
Sbjct: 597 ATSPEDVSVYIMLS 610
>IMGA|Medtr5g106500.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 42829004-42833246 E
EGN_Mt090430 20090702
Length = 828
Score = 222 bits (566), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 130/395 (32%), Positives = 219/395 (55%), Gaps = 15/395 (3%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDI-----PNARKVFDGIPVKNLVSWNSMLDGYAKCGDI 92
K + D + +L+ S+ R++ +A + GI + + S+ ++D YAK G I
Sbjct: 419 KQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESY--LIDMYAKSGSI 476
Query: 93 SMARQVF--DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
A +F + ++D +W+ +I GY + G ++A+ + ++M V PN VT+ S+L
Sbjct: 477 RTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILP 536
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
AC+ +G++ R +H + I L + + TSL D Y+KCGAI A +VF K S
Sbjct: 537 ACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGAISYAENVFLRTPEKNS-- 594
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
+ +M+ + HG+ K +L L+ M G++PD +T++ +LSAC + GLV E F+
Sbjct: 595 VTYTTMMMCYGQHGMGKRALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFES 654
Query: 271 LGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP-TASMLGALLNGCMNHGKL 328
+ K + + P EHY C+ D++ R G+V EAY+F+ + T + G+LL C NHG
Sbjct: 655 MEKVHKIKPSIEHYCCVADMLGRVGRVVEAYEFVKGLGEDANTMEIWGSLLGSCRNHGHF 714
Query: 329 DLAETVGRKLIE--LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
+L + V +KL+ ++ G +V LSN+YA W+K +R+ M+ G+ K G S+V
Sbjct: 715 ELGKAVAKKLLNMGMDKRMAGYHVLLSNIYAEEGEWEKVDRVRKQMKEKGLHKETGCSWV 774
Query: 387 EMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
E+ G ++ FV+ D+ HP S +IY ML + MK+
Sbjct: 775 EIAGFVNCFVSRDEKHPQSSEIYYMLDMLTLDMKY 809
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 106/193 (54%), Gaps = 1/193 (0%)
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
V +P ++ N+++ Y++C + + +VFD M E+D +SW+ +I +V+ G +EA
Sbjct: 351 VIKSLPGSLIIILNAVMVMYSRCNHVDTSLKVFDKMLERDAVSWNTIISAFVQNGFDEEA 410
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
L + EM+ + VT ++L A ++L L G+ H Y+I + + + L+DM
Sbjct: 411 LMLVCEMQKQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFE-GMESYLIDM 469
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAK G+I+ A +F D WN++I G+ +GL ++++ L +M + V P+ +
Sbjct: 470 YAKSGSIRTAELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAV 529
Query: 247 TYLNLLSACAHGG 259
T ++L AC+ G
Sbjct: 530 TLASILPACSSMG 542
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 146/370 (39%), Gaps = 71/370 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAG--YESDRFVSNSLIHMYSSF 58
M+ V P +TF L A + L +G++ K G Y SD FV +S I M+S
Sbjct: 212 MINQSVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDV 271
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
G + AR VFD ++ W+ +I YV
Sbjct: 272 -------------------------------GCMDYARMVFDRCLNKNTEIWNTMIVAYV 300
Query: 119 RKGDYDEALAVF-EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
+ EA+ VF + + ++VT++SVL A + L + H +VI + +
Sbjct: 301 QNNCPVEAIDVFIQALESEEGVCDDVTLLSVLTAVSQLQQIKLAEQFHAFVIKSLPGSLI 360
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
++ +++ MY++C + +L VF L + D WN++I F +G +E+L L EM
Sbjct: 361 IILNAVMVMYSRCNHVDTSLKVFDKMLER--DAVSWNTIISAFVQNGFDEEALMLVCEMQ 418
Query: 238 IVGVKPDEITYLNLLSACA-----------HGGLVKEAW-------YFFDCLGKNGMTPK 279
D +T LLSA + H L++ Y D K+G
Sbjct: 419 KQKFLIDSVTATALLSAASNLRNLYVGKQTHAYLIRRGIQFEGMESYLIDMYAKSGSIRT 478
Query: 280 SE--------------HYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGC 322
+E + ++ + G +A L Q+ +Q P A L ++L C
Sbjct: 479 AELLFEQNCSSDRDQATWNAIIAGYTQNGLNEKAILLLKQMLVQNVIPNAVTLASILPAC 538
Query: 323 MNHGKLDLAE 332
+ G + LA
Sbjct: 539 SSMGSMGLAR 548
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 14/198 (7%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
+ +NS+L+ YA C A VFD+M ++V++W+ LI +V+ Y +A+ F M
Sbjct: 157 IVYNSLLNMYASCQH-EYALNVFDVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQ 215
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYV--IDNELPLTLVLRTSLVDMYAKCGAIQ 194
P+ VT V++ A + LG +M + ++ ++ + + +S + M++ G +
Sbjct: 216 SVMPSPVTFVNLFPALSKLGDSRTVKMFYGFMRKFGDQYVSDVFVVSSAILMFSDVGCMD 275
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF-----SEMHIVGVKPDEITYL 249
A VF L K ++ IWN+MI + + E++D+F SE + D++T L
Sbjct: 276 YARMVFDRCLNKNTE--IWNTMIVAYVQNNCPVEAIDVFIQALESEEGVC----DDVTLL 329
Query: 250 NLLSACAHGGLVKEAWYF 267
++L+A + +K A F
Sbjct: 330 SVLTAVSQLQQIKLAEQF 347
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 11/206 (5%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV- 135
S S L + G +A + D +P + W+ +I G++ +AL ++ +MR
Sbjct: 50 TSIRSRLSKLCREGQPHLALHLLDSLPRPSTVVWNSVIIGFICNNLPHQALLLYAKMRSN 109
Query: 136 -SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-----DNELPLTLVLRTSLVDMYAK 189
S + T S L ACA + G+ +H + + N P + ++ SL++MYA
Sbjct: 110 SSCSTFDPYTFSSTLKACALTKDILTGKAIHSHFLRSHSNTNTGP-SRIVYNSLLNMYAS 168
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
C + AL+VF +M+ +V WN++I F ++++ F+ M V P +T++
Sbjct: 169 CQH-EYALNVF--DVMRRRNVVAWNTLILSFVKMNRYPQAVEAFANMINQSVMPSPVTFV 225
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNG 275
NL A + G + F+ + K G
Sbjct: 226 NLFPALSKLGDSRTVKMFYGFMRKFG 251
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 99/226 (43%), Gaps = 34/226 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ +T + A + + L +HG+ + E + +V SL YS
Sbjct: 519 MLVQNVIPNAVTLASILPACSSMGSMGLARQLHGFSIRRFLEKNVYVGTSLTDTYSKCGA 578
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A VF P KN V++ +M+ Y + G M ++
Sbjct: 579 ISYAENVFLRTPEKNSVTYTTMMMCYGQHG---MGKR----------------------- 612
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPLTLVL 179
AL +++ M SG +P+ VT V++L AC + G +D+G + + +++ ++
Sbjct: 613 -----ALTLYDSMLRSGIRPDAVTFVAILSACNYSGLVDEGLQIFESMEKVHKIKPSIEH 667
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF-IWNSMIGGFACHG 224
+ DM + G + EA + F GL + ++ IW S++G HG
Sbjct: 668 YCCVADMLGRVGRVVEA-YEFVKGLGEDANTMEIWGSLLGSCRNHG 712
>IMGA|Medtr2g009870.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 2257010-2258878 H
EGN_Mt090430 20090702
Length = 622
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 123/385 (31%), Positives = 210/385 (54%), Gaps = 35/385 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ +T L A A + G IHGY + G++S S +LI++Y
Sbjct: 268 GVSPNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLY--------- 318
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGD-ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
+CG + +A ++F+ +DV+ WS +I Y R+G+
Sbjct: 319 ----------------------CECGQSLHLAERIFEGSSLRDVVLWSSIIGSYARRGES 356
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
D+AL +F +MR +PN VT+++V+ AC +L + G ++H Y++ + ++ + +L
Sbjct: 357 DKALKLFNKMRTEETEPNYVTLLAVISACTNLSSFKHGGVIHGYILKFGIGFSIFVCNAL 416
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
++MYAKCG++ ++ +F M D WNSMI + HG +++L F EM GVK
Sbjct: 417 INMYAKCGSLDDSRKIFLE--MPSRDSVTWNSMISAYGLHGYGEQALQHFYEMKERGVKL 474
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS-EHYACMVDVMARAGQVAEAYQF 302
D +T+L +LSAC H GLV E F+ + + P + EHYAC++D+ R+G++ +A +
Sbjct: 475 DAVTFLAVLSACNHAGLVTEGQQLFEQVNADCEIPITIEHYACLIDLHGRSGKLEDALEI 534
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRW 362
L +P++P+A + +L++ C HG+LD+AE++ +LI EP+ Y LS ++A RW
Sbjct: 535 LRTMPMKPSARIWSSLVSSCKLHGRLDIAESLSSQLIRSEPNNAASYTLLSMIHAEKGRW 594
Query: 363 DKARSMREAMERMGVKKSPGYSFVE 387
+RE M+ ++K G+S +E
Sbjct: 595 LDIEQVRETMKLQRLRKCYGFSRIE 619
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 124/235 (52%), Gaps = 3/235 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+ +D Y +CGD MAR VFD M ++ +SW+ +I G DYD ALA + EM+V G
Sbjct: 211 TAFVDFYFRCGDSLMARSVFDEMEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVS 270
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG-AIQEALH 198
PN VT++++L ACA G + G+ +H Y +L+ +Y +CG ++ A
Sbjct: 271 PNRVTLIALLAACARPGFVKYGKEIHGYAFRRGFDSCHSFSPALIYLYCECGQSLHLAER 330
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
+F ++ DV +W+S+IG +A G ++L LF++M +P+ +T L ++SAC +
Sbjct: 331 IFEGSSLR--DVVLWSSIIGSYARRGESDKALKLFNKMRTEETEPNYVTLLAVISACTNL 388
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
K + K G+ ++++ A+ G + ++ + ++P + + +
Sbjct: 389 SSFKHGGVIHGYILKFGIGFSIFVCNALINMYAKCGSLDDSRKIFLEMPSRDSVT 443
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 63/188 (33%), Positives = 99/188 (52%), Gaps = 7/188 (3%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-- 137
NS++ YAK DI ARQVFD MP +D ++W+ +I+ Y++ G EAL + ++ G
Sbjct: 105 NSIISMYAKFFDIESARQVFDTMPHRDTITWNSMINAYLQNGLLVEALQMLKDFYFLGFL 164
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHY-VIDNELPL--TLVLRTSLVDMYAKCGAIQ 194
PKP + + +C GR +H V+D + + ++ L T+ VD Y +CG
Sbjct: 165 PKPELLASMVSMCGREMDLGWRIGRQIHGLVVVDGRIRIQHSVFLSTAFVDFYFRCGDSL 224
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
A VF M+ + W ++I G A + +L + EM + GV P+ +T + LL+A
Sbjct: 225 MARSVFDE--MEVKNEVSWTAVISGCANNQDYDVALACYREMQVEGVSPNRVTLIALLAA 282
Query: 255 CAHGGLVK 262
CA G VK
Sbjct: 283 CARPGFVK 290
>IMGA|Medtr5g076070.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 27779303-27782350 E
EGN_Mt090430 20090702
Length = 765
Score = 221 bits (564), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 131/405 (32%), Positives = 220/405 (54%), Gaps = 25/405 (6%)
Query: 3 RVGVFPDHLTFPFLAKASACLLK-RELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
V V P+ T A + C +K ELG+ +H TK GYES+ V NSL+++Y I
Sbjct: 272 EVQVQPNEYTLTS-ALSQCCEVKCLELGIQVHALCTKLGYESNLRVRNSLLYLYLKCGCI 330
Query: 62 PNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKG 121
A+++F G+ NLV+WN+M+ G+A+ ++S +D LS +KG
Sbjct: 331 VEAQRLFKGMNDVNLVTWNAMIAGHAQMMELS-----------KDNLS-------AYQKG 372
Query: 122 DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRT 181
EAL +F ++ SG KP+ T SVL C+ + AL++G +H I +V+ +
Sbjct: 373 --IEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGS 430
Query: 182 SLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
S+++MY KCG+I+ A VF M + +W +MI GFA HG K++L+LF +M +VG+
Sbjct: 431 SMINMYNKCGSIERASKVFLE--MSIRTMILWTTMITGFAQHGWSKQALNLFEDMKLVGI 488
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAY 300
+P+ +T++ +LSAC G+V EA+ +F+ + K + P +HY C+VD++ R GQV EA+
Sbjct: 489 RPNLVTFVGVLSACGSAGMVNEAFNYFEIMQKEYKIKPVMDHYVCLVDMLVRLGQVQEAF 548
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR 360
+ ++ + + + L+ GC++ G L+L KL+ L+P Y L N Y
Sbjct: 549 DLIKKMDYKASEFIWSNLIVGCLSQGNLELGCDAAEKLLSLKPKDTETYKLLLNAYVSAG 608
Query: 361 RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSS 405
R+D + M + + +S++ + ++ F +DK+ S
Sbjct: 609 RYDDVSRVENIMREEKIGELKDWSWISIKDRVYSFQTNDKADIES 653
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/362 (24%), Positives = 154/362 (42%), Gaps = 54/362 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L +P + T A L +LG +H YI K + D + N+L +Y+
Sbjct: 166 LLHSECYPSNYTLAIALNACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYT---- 221
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKC-GDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
KC G + + F + E+DV+SW+ I
Sbjct: 222 ---------------------------KCGGKLEVGLTAFRRIKEKDVISWTAAISACGE 254
Query: 120 KGDYDEALAVFEEMRVS--GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
KG+ + + VF EM + +PNE T+ S L C + L+ G +H L
Sbjct: 255 KGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQCCEVKCLELGIQVHALCTKLGYESNL 314
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA-----------CHGLV 226
+R SL+ +Y KCG I EA +F+ M ++ WN+MI G A +
Sbjct: 315 RVRNSLLYLYLKCGCIVEAQRLFKG--MNDVNLVTWNAMIAGHAQMMELSKDNLSAYQKG 372
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
E+L+LFS+++ G+KPD T+ ++LS C+ +++ K G + M
Sbjct: 373 IEALNLFSKLNRSGMKPDPFTFSSVLSVCSKMMALEQGEQIHARTIKTGFLSDVVVGSSM 432
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG----KLDLAETVGRKLIELE 342
+++ + G + A + ++ I+ T + ++ G HG L+L E + KL+ +
Sbjct: 433 INMYNKCGSIERASKVFLEMSIR-TMILWTTMITGFAQHGWSKQALNLFEDM--KLVGIR 489
Query: 343 PH 344
P+
Sbjct: 490 PN 491
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 104/228 (45%), Gaps = 37/228 (16%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD 91
IH +I K G D F+S+ L+ +Y AKCG
Sbjct: 95 IHCHIVKTGSHEDPFLSSFLVTVY-------------------------------AKCGR 123
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV-SGPKPNEVTMVSVLC 150
+ A+QVFD M ++ ++W+ L+ GYV+ A+ +FEEM + S P+ T+ L
Sbjct: 124 MECAQQVFDHMNRRNAVAWTNLMKGYVQNSMPKHAIHLFEEMLLHSECYPSNYTLAIALN 183
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA-IQEALHVFRSGLMKPSD 209
AC L +L G +H Y+I + + +L +Y KCG ++ L FR +K D
Sbjct: 184 ACTSLHSLKLGEQLHAYIIKYHVDFDTSIGNALCSLYTKCGGKLEVGLTAFRR--IKEKD 241
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHI--VGVKPDEITYLNLLSAC 255
V W + I G + + +F EM + V V+P+E T + LS C
Sbjct: 242 VISWTAAISACGEKGEAMKGVRVFVEMLLDEVQVQPNEYTLTSALSQC 289
>IMGA|AC233560_17.1 Pentatricopeptide repeat AC233560.2 44393-42525
E EGN_Mt090430 20090702
Length = 623
Score = 221 bits (562), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 103/290 (35%), Positives = 178/290 (61%), Gaps = 3/290 (1%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDL 101
E D N++I Y D+ A K+F +P+ +++SWNS++ G+++ GD+ ++ F+
Sbjct: 305 ERDACSWNTVIGGYVQIGDMEEASKLFLEMPIPDVLSWNSIISGFSQIGDLKRVKEFFEN 364
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP ++++SW+ +I GY + DY A+ +F +M++ G +P+ T+ S+L L L G
Sbjct: 365 MPHKNLISWNSVIAGYEKNEDYKGAIELFSQMQLKGERPDRHTLSSILSVSTGLVDLYLG 424
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H +V +P L + SL+ MY++CG I +A HVF + DV WN+MIGG+A
Sbjct: 425 KQIHQFVTKTVVP-DLPINNSLITMYSRCGEIGDARHVFNE-MKLYKDVITWNAMIGGYA 482
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKS 280
HG ++L+LF M + ++P IT++++L+ACAH GLV+E F+ + + G+ P+
Sbjct: 483 FHGFAAQALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRV 542
Query: 281 EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDL 330
EH+A +VD++ R GQ+ EA + +P++P ++ GALL C H +DL
Sbjct: 543 EHFASLVDILGRQGQLQEAMDLIVNMPVKPDKAVWGALLGACRVHSNVDL 592
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 163/351 (46%), Gaps = 45/351 (12%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD---ISMARQVFDLMPEQ 105
NS+I Y R+I AR++FD +P++++VSWN ++ GY C + R++FD+MP++
Sbjct: 73 NSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDIMPQR 132
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG---- 161
D +SW+ +I GY + G D+A+ +FE M P+ N V+ +V+ G +D
Sbjct: 133 DCVSWNTVISGYAKNGRMDQAIEIFESM----PERNVVSCNAVVNGFLLNGDVDSAVGFF 188
Query: 162 -RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
+M ++ ++R +DM A+ + G K V+ +N++I G+
Sbjct: 189 RKMGERDSASLSGLVSGLVRNGKLDMAAEI-----LVEYGNEGDEKDDLVYAYNTLIAGY 243
Query: 221 ACHGLVKESLDLFSE-MHIVG--------VKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
G+V+E+ +F M G +K + +++ +++ G V A FD +
Sbjct: 244 GQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMMCYVKAGDVVSARELFDRM 303
Query: 272 GKNGMTPKSEHYACMVDVM----ARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
E AC + + + G + EA + ++PI P ++++G G
Sbjct: 304 --------VERDACSWNTVIGGYVQIGDMEEASKLFLEMPI-PDVLSWNSIISGFSQIGD 354
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
L ++ E PH++ + ++V A + + + + E +M +K
Sbjct: 355 LKRV----KEFFENMPHKN--LISWNSVIAGYEKNEDYKGAIELFSQMQLK 399
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD T + S L+ LG IH ++TK D ++NSLI MYS +I +A
Sbjct: 400 GERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKT-VVPDLPINNSLITMYSRCGEIGDA 458
Query: 65 RKVFDGIPV-KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
R VF+ + + K++++WN+M+ GYA G +
Sbjct: 459 RHVFNEMKLYKDVITWNAMIGGYAFHGFAA------------------------------ 488
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTS 182
+AL +FE M+ +P +T +SVL ACAH G +++G R + + D + + S
Sbjct: 489 -QALELFERMKGLKIQPTYITFISVLNACAHAGLVEEGKRQFNSMINDYGIEPRVEHFAS 547
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
LVD+ + G +QEA+ + + +KP D +W +++G H V
Sbjct: 548 LVDILGRQGQLQEAMDLIVNMPVKP-DKAVWGALLGACRVHSNV 590
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 132/283 (46%), Gaps = 27/283 (9%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR-KGD 122
AR +FD +N V+WNSM+ GY + +I+ ARQ+FD MP +D++SW+ +I GY +G
Sbjct: 57 ARTLFDSTNHRNTVTWNSMITGYVQRREIAKARQLFDEMPLRDIVSWNLIISGYFSCRGS 116
Query: 123 --YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+E +F+ M P+ + V+ +V+ A GRM I +P V+
Sbjct: 117 RFVEEGRKLFDIM----PQRDCVSWNTVISGYAK-----NGRMDQAIEIFESMPERNVVS 167
Query: 181 -TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
++V+ + G + A+ FR M D + ++ G +G + + ++ E
Sbjct: 168 CNAVVNGFLLNGDVDSAVGFFRK--MGERDSASLSGLVSGLVRNGKLDMAAEILVEYGNE 225
Query: 240 GVKPDEITYL--NLLSACAHGGLVKEAWYFFDCL---------GKNGMTPKSEHYACMVD 288
G + D++ Y L++ G+V+EA + FD + GK + + M+
Sbjct: 226 GDEKDDLVYAYNTLIAGYGQRGMVEEARHVFDGVMSDQGEGNEGKRRLKRNVVSWNSMMM 285
Query: 289 VMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
+AG V A + ++ ++ A ++ G + G ++ A
Sbjct: 286 CYVKAGDVVSARELFDRM-VERDACSWNTVIGGYVQIGDMEEA 327
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 93/189 (49%), Gaps = 14/189 (7%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSW 110
++ + R + K D IP ++L N + + G ++ AR +FD ++ ++W
Sbjct: 14 ILQLAPHIRSFTSQTKTNDTIP-QSLYQLNKKISHLIRTGRLTAARTLFDSTNHRNTVTW 72
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHY 167
+ +I GYV++ + +A +F+EM P + V+ ++S +C +++GR +
Sbjct: 73 NSMITGYVQRREIAKARQLFDEM----PLRDIVSWNLIISGYFSCRGSRFVEEGRKLFDI 128
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+ + V +++ YAK G + +A+ +F S M +V N+++ GF +G V
Sbjct: 129 MPQRD----CVSWNTVISGYAKNGRMDQAIEIFES--MPERNVVSCNAVVNGFLLNGDVD 182
Query: 228 ESLDLFSEM 236
++ F +M
Sbjct: 183 SAVGFFRKM 191
>IMGA|Medtr7g093890.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 21144834-21146717 E
EGN_Mt090430 20090702
Length = 551
Score = 220 bits (561), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 127/387 (32%), Positives = 198/387 (51%), Gaps = 34/387 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R GV PD TF A + ++G+ +H + ++GY D V NSL+ MY
Sbjct: 198 MNREGVKPDEFTFASALTGLATISSLKMGMQVHAQLVRSGYGDDICVGNSLVDMY----- 252
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+KN + +G+ + FD +P +DV SW+ + DG ++
Sbjct: 253 ------------LKN----QKLEEGF----------KAFDEIPHKDVCSWTQMADGCLQW 286
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+ ALAV +M+ G KPN+ T+ + L ACA L ++++G+ H I + + +
Sbjct: 287 GEPRMALAVIAKMKKMGVKPNKFTLATALNACACLASMEEGKQFHGLRIKLGSDVDVCVD 346
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L+DMYAKCG + A VFRS V W +MI A +G E+L +F EM
Sbjct: 347 NALLDMYAKCGCMDSAWTVFRS--TNSRSVVSWTTMIMACAQNGQPGEALQIFDEMKETS 404
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEA 299
V+P+ IT++ +L AC+ GG V E W + + K+ G+ P +HY CMV ++ RAG + EA
Sbjct: 405 VEPNYITFICVLYACSQGGFVDEGWKYLSSMDKDYGIIPGEDHYICMVSILGRAGLIKEA 464
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + ++P P + LL+ C HG ++ + I+ + + YV LSN+ A
Sbjct: 465 KELILRMPFHPGVRVWQTLLSACQIHGDVETGKLAAEHAIKHDKNDPSSYVLLSNMLAET 524
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFV 386
WD S+RE ME VKK PG S++
Sbjct: 525 SNWDCVVSLRELMETRNVKKVPGSSWI 551
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 143/322 (44%), Gaps = 58/322 (18%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G AIH Y K F+ N L++MY +D+ +A ++FD +P +N+VSW+S++ G
Sbjct: 24 GTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDEMPERNVVSWSSVMTGCVH 83
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
G S A +F M + G+V KPNE T VS
Sbjct: 84 NGGASDALSLFSCMHRE----------GFV--------------------KPNEFTFVSA 113
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L AC+ + + ++ V+ + L + L + + + G + EAL +F + ++
Sbjct: 114 LQACSLSENVTQAYQIYSLVVRSGLECNVFLLNAFLTALVRNGKLTEALQIFETSPIR-- 171
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSE-MHIVGVKPDEITYLNLLSACA----------- 256
D WN+M+GG+ E + +F M+ GVKPDE T+ + L+ A
Sbjct: 172 DTVTWNTMMGGYL--EFSSEQIPVFWRYMNREGVKPDEFTFASALTGLATISSLKMGMQV 229
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
H LV+ + C+G + +VD+ + ++ E ++ +IP + S
Sbjct: 230 HAQLVRSGYGDDICVGNS-----------LVDMYLKNQKLEEGFKAFDEIPHKDVCSWT- 277
Query: 317 ALLNGCMNHGKLDLAETVGRKL 338
+ +GC+ G+ +A V K+
Sbjct: 278 QMADGCLQWGEPRMALAVIAKM 299
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 6/164 (3%)
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
KG +H Y I +P TL L+ L++MY KC + AL +F M +V W+S++ G
Sbjct: 23 KGTAIHAYFIKGHIPFTLFLQNHLLNMYIKCKDLTSALQLFDE--MPERNVVSWSSVMTG 80
Query: 220 FACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
+G ++L LFS MH G VKP+E T+++ L AC+ V +A+ + + ++G+
Sbjct: 81 CVHNGGASDALSLFSCMHREGFVKPNEFTFVSALQACSLSENVTQAYQIYSLVVRSGLEC 140
Query: 279 KSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA---SMLGALL 319
+ + R G++ EA Q PI+ T +M+G L
Sbjct: 141 NVFLLNAFLTALVRNGKLTEALQIFETSPIRDTVTWNTMMGGYL 184
>IMGA|Medtr3g030450.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 8243360-8241489 H
EGN_Mt090430 20090702
Length = 623
Score = 219 bits (559), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 133/428 (31%), Positives = 226/428 (52%), Gaps = 39/428 (9%)
Query: 13 FPFLAKASACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
F FL+ SAC+ ++ + G +H K G + V N+L++MY F + +A ++F
Sbjct: 148 FTFLSVISACVSEKACDEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSE 207
Query: 71 IP--VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+P K++VSWNS++ A+ G MP +EA
Sbjct: 208 MPESEKSIVSWNSIVAVCAQNG-----------MP--------------------NEAFN 236
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
F+ MRV+G P++ TMVS+L AC + ++H + L L + T+L+++Y+
Sbjct: 237 CFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYS 296
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEIT 247
K G + + VF + KP V W +M+ G+A HG KE+++ F + G++PD +T
Sbjct: 297 KLGRLNNSRKVFEE-ISKPDKV-AWTAMLAGYAMHGCGKEAIEFFERIVREEGMEPDHVT 354
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGK-NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+ +LLSAC+H GLVKE YFF + + P+ +HY+CMVD++ R G + +A++ + +
Sbjct: 355 FTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCGLLDDAHELIKNM 414
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
P +P + + GALL C H +DL + + LI L+P Y+ LSN+Y+ W+ A
Sbjct: 415 PFEPNSGVWGALLGACRVHRNIDLGKEAAKNLIALDPSDPRNYIMLSNMYSAAGLWNDAS 474
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYE 426
+R M+ + ++ G SF+E +HRFV D +HP S +I+ L ++ +++ +
Sbjct: 475 KVRTLMKNKVLTRNQGCSFIEHGNKIHRFVVDDYTHPDSHRIHKKLEEVMKKIQDVGFVH 534
Query: 427 NQEYYFYD 434
E +D
Sbjct: 535 ETESILHD 542
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/361 (24%), Positives = 165/361 (45%), Gaps = 29/361 (8%)
Query: 44 DRFVSNSLIHMYSSFRDIPNAR----KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF 99
D F+S ++H+ SS + R V + ++ + ++ Y K G A +F
Sbjct: 45 DPFLSTLILHLKSS-SSVSICRIIHAHVIKSLDYRDGFIGDQLVSCYLKMGPTKDAYLLF 103
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV-SGPKPNEVTMVSVLCACAHLGAL 158
D MP++D +SW+ L+ G + G E L+VF +M+ S K NE T +SV+ AC A
Sbjct: 104 DEMPKKDFVSWNSLVSGLAKIGQLGECLSVFCKMKSDSELKLNEFTFLSVISACVSEKAC 163
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIG 218
D+G +H + L + + +LV+MY K G ++ A +F + WNS++
Sbjct: 164 DEGYYVHCCAMKLGLVYEVKVVNALVNMYGKFGFVESAFRLFSEMPESEKSIVSWNSIVA 223
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
A +G+ E+ + F M + G PD+ T ++LL AC + L + + G+
Sbjct: 224 VCAQNGMPNEAFNCFDMMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDE 283
Query: 279 KSEHYACMVDVMARAGQVAEAYQFLCQIP----IQPTASMLGALLNGCMNHGKLDLAETV 334
++++ ++ G++ + + +I + TA + G ++GC ++ E +
Sbjct: 284 NLTIVTTLLNLYSKLGRLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCGKEA-IEFFERI 342
Query: 335 GRK------------LIELEPH----QDGRYV--GLSNVYAIFRRWDKARSMREAMERMG 376
R+ L+ H ++G+Y +S+VY + R D M + + R G
Sbjct: 343 VREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQPRLDHYSCMVDLLGRCG 402
Query: 377 V 377
+
Sbjct: 403 L 403
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 124/272 (45%), Gaps = 46/272 (16%)
Query: 1 MLRV-GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M+RV G FPD T L +A + +HG I G + + + +L+++YS
Sbjct: 240 MMRVNGFFPDDATMVSLLQACENFPLGRMVEVLHGVIFTCGLDENLTIVTTLLNLYSKLG 299
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAK--CGDISMARQVFDLMPEQDVLSWSCLIDGY 117
+ N+RKVF+ I + V+W +ML GYA CG
Sbjct: 300 RLNNSRKVFEEISKPDKVAWTAMLAGYAMHGCG--------------------------- 332
Query: 118 VRKGDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID-NELPL 175
EA+ FE + R G +P+ VT +L AC+H G + +G+ + D ++
Sbjct: 333 ------KEAIEFFERIVREEGMEPDHVTFTHLLSACSHSGLVKEGKYFFRVMSDVYKVQP 386
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
L + +VD+ +CG + +A + ++ +P+ +W +++G AC V ++DL E
Sbjct: 387 RLDHYSCMVDLLGRCGLLDDAHELIKNMPFEPNSG-VWGALLG--ACR--VHRNIDLGKE 441
Query: 236 M--HIVGVKP-DEITYLNLLSACAHGGLVKEA 264
+++ + P D Y+ L + + GL +A
Sbjct: 442 AAKNLIALDPSDPRNYIMLSNMYSAAGLWNDA 473
>IMGA|Medtr7g093710.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 21086670-21085160 H
EGN_Mt090430 20090702
Length = 482
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/348 (33%), Positives = 191/348 (54%), Gaps = 23/348 (6%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
+ N+ +S++ Y++CG + A +VFD M ++V+SW+ +I G+ ++ D L +F
Sbjct: 140 IANVYVGSSLISLYSRCGLLGDAYRVFDEMSVRNVVSWTAIIAGFAQEWRVDMCLELFRR 199
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
MR KPN T S+L AC GAL GR +H +I L + +L+ MY+KCG
Sbjct: 200 MRGLELKPNYFTYTSLLSACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGV 259
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
I +AL++F + M DV WNSMI VGV PD +T+L +L
Sbjct: 260 IVDALYIFEN--MVSKDVVTWNSMI---------------------VGVNPDAVTFLGIL 296
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTA 312
S+C HGGLVKE +F + +G+ P+ +HY+C+VD++ RAG + EA F+ +P+ P A
Sbjct: 297 SSCRHGGLVKEGQVYFSSMVDHGLQPELDHYSCIVDLLGRAGLLLEALDFIQNMPVCPNA 356
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAM 372
+ G+LL+ HG + + + LEP + L+N+YA W++ +R+ M
Sbjct: 357 VIWGSLLSSSRLHGNVWIGIRAAESRLSLEPGCSSTLLQLANLYASVGWWNQVARVRQLM 416
Query: 373 ERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+ G+K +PG S++E+ +HRF + DKS+ I +++ +V M
Sbjct: 417 KDKGLKPNPGCSWIEVKNKVHRFESQDKSNSRMNGILLIMDSLVDHMS 464
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 29/166 (17%)
Query: 8 PDHLTFPFLAKASACLLKRELG--LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
P++ T+ L SAC+ LG +H I + G+ V N+LI MYS I +A
Sbjct: 207 PNYFTYTSLL--SACMGSGALGHGRGVHCQIIQMGFHCYLHVENALIAMYSKCGVIVDAL 264
Query: 66 KVFDGIPVKNLVSWNSML-----DGYAKCGDISMAR--------QVF-------DLMPEQ 105
+F+ + K++V+WNSM+ D G +S R QV+ L PE
Sbjct: 265 YIFENMVSKDVVTWNSMIVGVNPDAVTFLGILSSCRHGGLVKEGQVYFSSMVDHGLQPEL 324
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
D +SC++D R G EAL + M V PN V S+L +
Sbjct: 325 D--HYSCIVDLLGRAGLLLEALDFIQNMPVC---PNAVIWGSLLSS 365
>IMGA|Medtr5g039620.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 16835816-16833954 H
EGN_Mt090430 20090702
Length = 620
Score = 219 bits (558), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 128/385 (33%), Positives = 200/385 (51%), Gaps = 5/385 (1%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +T + A A L LG +HG K V SL+ MYS +A V
Sbjct: 236 PNKVTLVSVVSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDV 295
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDY 123
F +NL++WNSM+ G + A ++F+ M ++ +L +W+ LI G+ +KG
Sbjct: 296 FSRSEKRNLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVC 355
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
EA F +M+ +G P + S+L C L + +H Y + + L T+L
Sbjct: 356 VEAFKYFSKMQCAGVAPCLKILTSLLSVCGDSCVLRSAKAIHGYALRICVDKDDFLATAL 415
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD Y KCG + A VF +KP D WN+MIGG+ +G + + ++F EM V+P
Sbjct: 416 VDTYMKCGCVSFARFVFDQFDVKPDDPAFWNAMIGGYGTNGDYESAFEVFYEMLDEMVQP 475
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ T++++LSAC+H G ++ FF + K G+ PK EH+ C+VD++ RAGQ+ EA L
Sbjct: 476 NSATFVSVLSACSHSGQIERGLRFFRMIRKYGLDPKPEHFGCVVDLLGRAGQLGEARD-L 534
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
Q +P AS+ +LL C + +L E + KLI++EP V LSN+YA RW
Sbjct: 535 VQELAEPPASVFDSLLGACRCYLDSNLGEEMAMKLIDIEPKNPAPLVVLSNIYAALGRWS 594
Query: 364 KARSMREAMERMGVKKSPGYSFVEM 388
+ +R + G+ K+ G S +E+
Sbjct: 595 EVERIRGLITDKGLDKNSGISMIEV 619
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 134/250 (53%), Gaps = 13/250 (5%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFD--------GIPVKNLVSWNSMLDGYAKC 89
+ G+ + R S +++ + S+ RD+ N V G+ VS S++ Y+KC
Sbjct: 127 QIGFWNIRPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVS-TSLVTAYSKC 184
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTMVSV 148
G + + +VF+ + ++V++++ + G ++ G + VF++M ++ KPN+VT+VSV
Sbjct: 185 GVLVSSNKVFENLRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKVTLVSV 244
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
+ ACA L + G+ +H + E +++ TSLVDMY+KCG A VF +
Sbjct: 245 VSACATLSNIRLGKQVHGLSMKLEACDHVMVVTSLVDMYSKCGCWGSAFDVFSRS--EKR 302
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
++ WNSMI G + + +++LF M G+ PD T+ +L+S A G+ EA+ +F
Sbjct: 303 NLITWNSMIAGMMMNSESERAVELFERMVDEGILPDSATWNSLISGFAQKGVCVEAFKYF 362
Query: 269 DCLGKNGMTP 278
+ G+ P
Sbjct: 363 SKMQCAGVAP 372
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 116/250 (46%), Gaps = 34/250 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ TFP L KA + L +H ++ K G+ S S +LI Y++ N R
Sbjct: 33 PNTFTFPILLKACSNLSSPSQTQILHAHLFKTGFHSHPHTSTALIASYAA-----NTRS- 86
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
A ++FD MP+ + +++ ++ G R G +A+
Sbjct: 87 ------------------------FHYALELFDEMPQPTITAFNAVLSGLSRNGPRGQAV 122
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+F ++ +PN VT+VS+L A + + +H + + + TSLV Y
Sbjct: 123 WLFRQIGFWNIRPNSVTIVSLLSA-RDVKNQSHVQQVHCLACKLGVEYDVYVSTSLVTAY 181
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKPDEI 246
+KCG + + VF + ++ +V +N+ + G +G + D+F +M + + KP+++
Sbjct: 182 SKCGVLVSSNKVFEN--LRVKNVVTYNAFMSGLLQNGFHRVVFDVFKDMTMNLEEKPNKV 239
Query: 247 TYLNLLSACA 256
T ++++SACA
Sbjct: 240 TLVSVVSACA 249
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 71/142 (50%), Gaps = 3/142 (2%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+ V G Y EAL ++ + S P PN T +L AC++L + + +++H ++
Sbjct: 7 VTKLVANGLYKEALNLYSHLHSSSPTPNTFTFPILLKACSNLSSPSQTQILHAHLFKTGF 66
Query: 174 PLTLVLRTSLVDMY-AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
T+L+ Y A + AL +F M + +N+++ G + +G +++ L
Sbjct: 67 HSHPHTSTALIASYAANTRSFHYALELFDE--MPQPTITAFNAVLSGLSRNGPRGQAVWL 124
Query: 233 FSEMHIVGVKPDEITYLNLLSA 254
F ++ ++P+ +T ++LLSA
Sbjct: 125 FRQIGFWNIRPNSVTIVSLLSA 146
>IMGA|Medtr1g126340.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 28156240-28160117 H
EGN_Mt090430 20090702
Length = 912
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 222/442 (50%), Gaps = 46/442 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M GV P+ +F A AC R L + +HG+I K + D V+N+L+
Sbjct: 411 MQAAGVRPN--SFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALV------ 462
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
D YA G I A V M +D ++++CL
Sbjct: 463 -------------------------DTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLN 497
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+KG + AL V M G K +E ++ S L A A LG ++ G+ +H Y + +
Sbjct: 498 QKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHS 557
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ SLV +Y+KCG+I +A F+ + D F WN +I GF+ +GL+ +L F +M +
Sbjct: 558 VSNSLVHLYSKCGSIHDANRAFKD--ISEPDAFSWNGLISGFSWNGLISHALSTFDDMRL 615
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
GVKPD IT L+L+SAC+HGGL++ +F + K +TPK +HY C+VD++ R G++
Sbjct: 616 AGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLE 675
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + ++ +P + + LLN C HG + L E + R+ +EL+P Y+ L+N+Y
Sbjct: 676 EAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYD 735
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
D R M G+++SPG ++E+ +H F A +K + ++I L F+++
Sbjct: 736 NAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEK--INEDEITEKLEFLIT 793
Query: 418 QMKHIVDYENQEYYFYDNEGKL 439
+ + N+ Y + +NE K
Sbjct: 794 E------FRNRRYQYQENEDKF 809
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 147/329 (44%), Gaps = 37/329 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV+P+ TF L A + L G +H ++ G E + + +++ MYS
Sbjct: 209 MIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYS---- 264
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
R++ D I V N L PE DV W+ LI G+ +
Sbjct: 265 --KCRRMVDAIKVSN-------------------------LTPEYDVYLWTTLISGFTQN 297
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EA++VF +M +SG PN T S+L A + + +LD G H VI L L +
Sbjct: 298 LQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIG 357
Query: 181 TSLVDMYAKCGAI-QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LVDMY KC I A+ VFR + +V W S+I GFA +++S LF+EM
Sbjct: 358 NALVDMYMKCSHITTNAVKVFRE--ITSPNVMCWTSLIAGFA-EKRLEDSFQLFAEMQAA 414
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GV+P+ T +L AC+ + + K + +VD A G + EA
Sbjct: 415 GVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEA 474
Query: 300 YQFLCQIPIQP--TASMLGALLNGCMNHG 326
+ + + ++ T + L A LN +HG
Sbjct: 475 WSVIGTMNLRDSITYTCLAARLNQKGHHG 503
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 35/258 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G +P+ T ++ L + E G+ IH K G E +RFV SL+ Y+
Sbjct: 106 MIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYT---- 161
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISM-ARQVFDLMPEQ-DVLSWSCLIDGYV 118
KCG S+ A ++ L+ + DV+SW+ ++ V
Sbjct: 162 ---------------------------KCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLV 194
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G + EA ++ +M SG PNE T V +L A + L G+++H ++I L LV
Sbjct: 195 ENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLV 254
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L+T++VDMY+KC + +A+ V S L DV++W ++I GF + V+E++ +F +M +
Sbjct: 255 LKTAVVDMYSKCRRMVDAIKV--SNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMEL 312
Query: 239 VGVKPDEITYLNLLSACA 256
G+ P+ TY +LL+A +
Sbjct: 313 SGLLPNNFTYSSLLNASS 330
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G+ IH I K G + D +++N+L+ +Y AK
Sbjct: 33 GICIHSPIIKLGLQHDLYLTNNLLSLY-------------------------------AK 61
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
+ AR +FD MP +DV+SW+ ++ + + + +AL +F+ M SG PNE T+ S
Sbjct: 62 TFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSA 121
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L +C LG ++G +H + L + + TSLV+ Y KCG S +
Sbjct: 122 LRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG 181
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC------AHGGLVK 262
DV W +M+ +G E+ +++ +M GV P+E T++ LL A ++G L+
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLH 241
Query: 263 EAWYFF-----------------------DCLGKNGMTPKSEHY--ACMVDVMARAGQVA 297
F D + + +TP+ + Y ++ + QV
Sbjct: 242 AHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVR 301
Query: 298 EAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG 351
EA + + P +LLN + LDL E ++I + +D Y+G
Sbjct: 302 EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVI-IVGLEDDLYIG 357
>IMGA|Medtr1g126060.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 28030618-28034495 H
EGN_Mt090430 20090702
Length = 912
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 136/442 (30%), Positives = 222/442 (50%), Gaps = 46/442 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M GV P+ +F A AC R L + +HG+I K + D V+N+L+
Sbjct: 411 MQAAGVRPN--SFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALV------ 462
Query: 59 RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYV 118
D YA G I A V M +D ++++CL
Sbjct: 463 -------------------------DTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLN 497
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
+KG + AL V M G K +E ++ S L A A LG ++ G+ +H Y + +
Sbjct: 498 QKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHS 557
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ SLV +Y+KCG+I +A F+ + D F WN +I GF+ +GL+ +L F +M +
Sbjct: 558 VSNSLVHLYSKCGSIHDANRAFKD--ISEPDAFSWNGLISGFSWNGLISHALSTFDDMRL 615
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
GVKPD IT L+L+SAC+HGGL++ +F + K +TPK +HY C+VD++ R G++
Sbjct: 616 AGVKPDSITLLSLISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLE 675
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + ++ +P + + LLN C HG + L E + R+ +EL+P Y+ L+N+Y
Sbjct: 676 EAMGVIEKMSFKPDSLICKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYD 735
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVS 417
D R M G+++SPG ++E+ +H F A +K + ++I L F+++
Sbjct: 736 NAGLSDFGEKTRRLMRERGLRRSPGQCWMEIRSRVHHFSAGEK--INEDEITEKLEFLIT 793
Query: 418 QMKHIVDYENQEYYFYDNEGKL 439
+ + N+ Y + +NE K
Sbjct: 794 E------FRNRRYQYQENEDKF 809
Score = 125 bits (315), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/329 (29%), Positives = 147/329 (44%), Gaps = 37/329 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV+P+ TF L A + L G +H ++ G E + + +++ MYS
Sbjct: 209 MIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLVLKTAVVDMYS---- 264
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
R++ D I V N L PE DV W+ LI G+ +
Sbjct: 265 --KCRRMVDAIKVSN-------------------------LTPEYDVYLWTTLISGFTQN 297
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EA++VF +M +SG PN T S+L A + + +LD G H VI L L +
Sbjct: 298 LQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIG 357
Query: 181 TSLVDMYAKCGAI-QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LVDMY KC I A+ VFR + +V W S+I GFA +++S LF+EM
Sbjct: 358 NALVDMYMKCSHITTNAVKVFRE--ITSPNVMCWTSLIAGFA-EKRLEDSFQLFAEMQAA 414
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
GV+P+ T +L AC+ + + K + +VD A G + EA
Sbjct: 415 GVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEA 474
Query: 300 YQFLCQIPIQP--TASMLGALLNGCMNHG 326
+ + + ++ T + L A LN +HG
Sbjct: 475 WSVIGTMNLRDSITYTCLAARLNQKGHHG 503
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 131/258 (50%), Gaps = 35/258 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G +P+ T ++ L + E G+ IH K G E +RFV SL+ Y+
Sbjct: 106 MIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYT---- 161
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISM-ARQVFDLMPEQ-DVLSWSCLIDGYV 118
KCG S+ A ++ L+ + DV+SW+ ++ V
Sbjct: 162 ---------------------------KCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLV 194
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G + EA ++ +M SG PNE T V +L A + L G+++H ++I L LV
Sbjct: 195 ENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLIMFGAELNLV 254
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L+T++VDMY+KC + +A+ V S L DV++W ++I GF + V+E++ +F +M +
Sbjct: 255 LKTAVVDMYSKCRRMVDAIKV--SNLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMEL 312
Query: 239 VGVKPDEITYLNLLSACA 256
G+ P+ TY +LL+A +
Sbjct: 313 SGLLPNNFTYSSLLNASS 330
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 149/357 (41%), Gaps = 66/357 (18%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G+ IH I K G + D +++N+L+ +Y AK
Sbjct: 33 GICIHSPIIKLGLQHDLYLTNNLLSLY-------------------------------AK 61
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
+ AR +FD MP +DV+SW+ ++ + + + +AL +F+ M SG PNE T+ S
Sbjct: 62 TFGVHRARHLFDEMPNRDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSA 121
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
L +C LG ++G +H + L + + TSLV+ Y KCG S +
Sbjct: 122 LRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGG 181
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC------AHGGLVK 262
DV W +M+ +G E+ +++ +M GV P+E T++ LL A ++G L+
Sbjct: 182 DVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLH 241
Query: 263 EAWYFF-----------------------DCLGKNGMTPKSEHY--ACMVDVMARAGQVA 297
F D + + +TP+ + Y ++ + QV
Sbjct: 242 AHLIMFGAELNLVLKTAVVDMYSKCRRMVDAIKVSNLTPEYDVYLWTTLISGFTQNLQVR 301
Query: 298 EAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG 351
EA + + P +LLN + LDL E ++I + +D Y+G
Sbjct: 302 EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVI-IVGLEDDLYIG 357
>IMGA|Medtr8g139400.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 34015849-34014119 H
EGN_Mt090430 20090702
Length = 576
Score = 218 bits (556), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 118/342 (34%), Positives = 196/342 (57%), Gaps = 4/342 (1%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N++I Y I AR++FD +P +N VS +M+ GY+K GD+ AR++FD M ++D+L
Sbjct: 236 NTMITGYVDCGSIVEARELFDAMPRRNSVSLITMIAGYSKSGDVHSARELFDQMDDKDLL 295
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRV--SGPKPNEVTMVSVLCACAHLGALDKGRMMHH 166
S++ +I Y + EAL +F M S P+++T+ SV+ AC+ LG L+ R +
Sbjct: 296 SYNAMIACYAQSSKPKEALDLFNVMLKPDSSLHPDKMTLASVISACSQLGNLEHWRWIES 355
Query: 167 YVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
+ + + L L T+L+D+YAKCG+I +A +F ++ DV +++MI G +G
Sbjct: 356 QINNFGIVLDDHLATALIDLYAKCGSIDKAYELFHG--LRKRDVVAYSAMIYGCGINGRA 413
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
++++LF M + P+ +TY +L+A H GL +E + F + NG+ P +HY M
Sbjct: 414 SDAVELFERMAGECIIPNLVTYTGILTAYNHAGLAEEGYRCFISMKDNGIVPSVDHYGIM 473
Query: 287 VDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
VD++ RAG + EAY+ + ++P+QP + GALL C H L L E + I+LE
Sbjct: 474 VDLLGRAGWLDEAYKLIMKMPMQPNVGVWGALLLACRLHDNLKLGEIAVQHCIKLESETA 533
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
G Y LS +YA +W+ A+ + +E + K PG S+ ++
Sbjct: 534 GYYSLLSGIYATVGKWNDAKKLTTGVEGKKIIKIPGCSWTQL 575
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 97/331 (29%), Positives = 177/331 (53%), Gaps = 17/331 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R+G+ P + K+ A + GL IHG++ K G+++ +V +L+ +Y D
Sbjct: 95 MRRIGLCPSSHAVSSILKSCARVEDDLCGLLIHGHVHKFGFDACVYVQTALLDLYCKIGD 154
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ARKVFD +P KN+VSWNS+L GY K G++ ++ FD +P +DV+SW+C++ GY +
Sbjct: 155 VVTARKVFDEMPDKNVVSWNSLLSGYIKGGNLDEGQRFFDEIPLKDVISWNCMVSGYAKA 214
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP-LTLVL 179
G D A +F++M P+ N + +++ G +D G ++ + + +P V
Sbjct: 215 GKMDRACYLFQQM----PERNFASWNTMI-----TGYVDCGSIVEARELFDAMPRRNSVS 265
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--H 237
+++ Y+K G + A +F M D+ +N+MI +A KE+LDLF+ M
Sbjct: 266 LITMIAGYSKSGDVHSARELFDQ--MDDKDLLSYNAMIACYAQSSKPKEALDLFNVMLKP 323
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-CMVDVMARAGQV 296
+ PD++T +++SAC+ G + E W + + N +H A ++D+ A+ G +
Sbjct: 324 DSSLHPDKMTLASVISACSQLGNL-EHWRWIESQINNFGIVLDDHLATALIDLYAKCGSI 382
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
+AY+ + + + A++ GC +G+
Sbjct: 383 DKAYELFHGLRKRDVVA-YSAMIYGCGINGR 412
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 100/210 (47%), Gaps = 10/210 (4%)
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
D SW C+I + +KG + EA++++ +MR G P+ + S+L +CA + G ++H
Sbjct: 68 DSFSWGCVIRFFSQKGQFVEAVSLYVQMRRIGLCPSSHAVSSILKSCARVEDDLCGLLIH 127
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
+V + ++T+L+D+Y K G + A VF M +V WNS++ G+ G
Sbjct: 128 GHVHKFGFDACVYVQTALLDLYCKIGDVVTARKVFDE--MPDKNVVSWNSLLSGYIKGGN 185
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
+ E F E+ + D I++ ++S A G + A Y F + + +
Sbjct: 186 LDEGQRFFDEIPL----KDVISWNCMVSGYAKAGKMDRACYLFQQMPERNFAS----WNT 237
Query: 286 MVDVMARAGQVAEAYQFLCQIPIQPTASML 315
M+ G + EA + +P + + S++
Sbjct: 238 MITGYVDCGSIVEARELFDAMPRRNSVSLI 267
>IMGA|Medtr4g089900.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 18859311-18862325 E
EGN_Mt090430 20090702
Length = 897
Score = 218 bits (554), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 135/430 (31%), Positives = 218/430 (50%), Gaps = 42/430 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASA---CLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
+ +G+ P+ +T + A L +E IH + K G+E D++V N+L+ MYS
Sbjct: 381 VFELGLSPNSVTLSSVLPACVRCESFLDKE---GIHSCVVKWGFEKDKYVQNALMDMYSR 437
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
I AR +F + K++VSWN+M+ GY CG A + M
Sbjct: 438 MGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQAEH-------- 489
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
R +D+ +E+ + KPN VT+++VL CA L AL KG+ +H Y + L +
Sbjct: 490 -RINTFDD----YEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDV 544
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ ++LVDMYAKCG + + VF M +V WN +I + HG +E+L LF M
Sbjct: 545 AVGSALVDMYAKCGCLNLSRTVFEQ--MSVRNVITWNVLIMAYGMHGKGEEALKLFRRMV 602
Query: 238 IVG-----VKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMA 291
G ++P+E+TY+ + ++ +H G+V E F+ K+G+ P S+HYAC+VD++
Sbjct: 603 EEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSDHYACLVDLLG 662
Query: 292 RAGQVAEAYQFLCQIPIQ-PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYV 350
R+GQ+ EAY + +P +LL C H L++ E + L L+P+ D
Sbjct: 663 RSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFVLDPNLD---- 718
Query: 351 GLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYM 410
Y K + M+ GV+K PG S++E +H+F+A D SHP S++++
Sbjct: 719 -----YGT-----KQSMLGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDVSHPQSKEVHE 768
Query: 411 MLGFIVSQMK 420
L + +MK
Sbjct: 769 YLETLSLRMK 778
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 125/258 (48%), Gaps = 35/258 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV PD+ FP + KA+A + LG +H ++ K G V NSL++MY
Sbjct: 76 MVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNSLVNMY----- 130
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCGDI AR+VFD + +D +SW+ +I+ R
Sbjct: 131 --------------------------GKCGDIDAARRVFDEITNRDDVSWNSMINAACRF 164
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL-GALDKGRMMHHYVIDNELPLTLVL 179
+++ A+ +F M + P T+VSV AC++L L G+ +H +V+ N T
Sbjct: 165 EEWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDWRTFT- 223
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+LV MYAK G + EA +F + D+ WN++I + + +E+L M
Sbjct: 224 NNALVTMYAKLGRVYEAKTLF--DVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQS 281
Query: 240 GVKPDEITYLNLLSACAH 257
GV+P+ +T ++L AC+H
Sbjct: 282 GVRPNGVTLASVLPACSH 299
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 120/219 (54%), Gaps = 4/219 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ YAK G + A+ +FD+ ++D++SW+ +I + ++EAL M SG +
Sbjct: 225 NALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVR 284
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVI-DNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN VT+ SVL AC+HL L G+ +H +V+ +N+L + +LVDMY C ++
Sbjct: 285 PNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRL 344
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLSACAH 257
VF G+ + + + +WN+MI G+ + E+++LF EM +G+ P+ +T ++L AC
Sbjct: 345 VF-DGMFRRT-IAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVR 402
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
+ C+ K G ++D+ +R G++
Sbjct: 403 CESFLDKEGIHSCVVKWGFEKDKYVQNALMDMYSRMGRI 441
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/359 (24%), Positives = 150/359 (41%), Gaps = 52/359 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML+ GV P+ +T + A + L G IH ++ ++N LI
Sbjct: 278 MLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFV---------LMNNDLI-------- 320
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
F G +++D Y C R VFD M + + W+ +I GYVR
Sbjct: 321 ----ENSFVGC---------ALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRN 367
Query: 121 GDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
EA+ +F EM G PN VT+ SVL AC + +H V+ +
Sbjct: 368 EFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWGFEKDKYV 427
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM--- 236
+ +L+DMY++ G I+ A +F G M D+ WN+MI G+ G ++L+L +M
Sbjct: 428 QNALMDMYSRMGRIEIARSIF--GSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRG 485
Query: 237 ---HIVG------------VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE 281
H + +KP+ +T + +L CA + + K ++
Sbjct: 486 QAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQMLSKDVA 545
Query: 282 HYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ +VD+ A+ G + + Q+ ++ + L+ HGK + A + R+++E
Sbjct: 546 VGSALVDMYAKCGCLNLSRTVFEQMSVRNVITW-NVLIMAYGMHGKGEEALKLFRRMVE 603
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 86/180 (47%), Gaps = 8/180 (4%)
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTS 182
+ +A++ + M +G P+ +VL A A + L+ G+ +H +V L + S
Sbjct: 66 FHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPTAVPNS 125
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
LV+MY KCG I A VF + D WNSMI + ++ LF M + V
Sbjct: 126 LVNMYGKCGDIDAARRVFDE--ITNRDDVSWNSMINAACRFEEWELAVHLFRLMLLENVG 183
Query: 243 PDEITYLNLLSACA---HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
P T +++ AC+ +G L+ + + F + +NG + A +V + A+ G+V EA
Sbjct: 184 PTSFTLVSVAHACSNLINGLLLGKQVHAF--VLRNGDWRTFTNNA-LVTMYAKLGRVYEA 240
>IMGA|Medtr3g028620.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 7414899-7410902 H
EGN_Mt090430 20090702
Length = 1125
Score = 217 bits (553), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 126/416 (30%), Positives = 204/416 (49%), Gaps = 39/416 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASAC---LLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M R G+ +++T L LLK G+ IH +I AG+E D +V +SLI MY
Sbjct: 642 MRREGLLSNYITIVNLLGTCMSPDYLLKH--GMPIHAHIVVAGFELDTYVQSSLITMY-- 697
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
A+CGD++ + +FD++ ++ +W+ +
Sbjct: 698 -----------------------------AQCGDLNTSSYIFDVLANKNSSTWNAIFSAN 728
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
G +EAL MR G ++ + L +L LD+G+ +H ++I L
Sbjct: 729 AHYGPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSWIIKLGFELDE 788
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
+ + +DMY KCG I + + + K WN +I A HG +++ + F EM
Sbjct: 789 YVLNATMDMYGKCGEIDDVFRILP--IPKIRSKRSWNILISALARHGFFRQATEAFHEML 846
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS-EHYACMVDVMARAGQV 296
+G+KPD +T+++LLSAC+HGGLV E +F + P + EH C++D++ R+G++
Sbjct: 847 DLGLKPDHVTFVSLLSACSHGGLVDEGLVYFSSMTSEFGVPTAIEHCVCIIDLLGRSGRL 906
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVY 356
AEA F+ ++P+ P + +LL C HG L+L +L EL D YV SNV
Sbjct: 907 AEAEGFIDKMPVPPNEFVWRSLLAACKVHGNLELGRKAADRLFELNSSDDSAYVLYSNVC 966
Query: 357 AIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
A +RW ++R+ ME +KK P S++++ + F D+ HP S QIY L
Sbjct: 967 ASTQRWGDVENVRKQMESQSLKKKPACSWIKLKNKVMTFGMGDQFHPQSAQIYAKL 1022
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 36/255 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R D++T L A + G +HG ITK+G ES+ V NSL+ MY
Sbjct: 443 MRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMY----- 497
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
A+ G A VF MP +D++SW+ ++ +V
Sbjct: 498 --------------------------AQAGSSEDAELVFHTMPARDLISWNSMMASHVED 531
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G Y A+ + EM + N VT + L AC + L+K +++H +VI + L++
Sbjct: 532 GKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAFVIHFAVHHNLIIG 588
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LV MY K G + EA V + +M DV WN++IGG A ++ F+ M G
Sbjct: 589 NTLVTMYGKFGLMDEAQKVCK--IMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREG 646
Query: 241 VKPDEITYLNLLSAC 255
+ + IT +NLL C
Sbjct: 647 LLSNYITIVNLLGTC 661
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 127/268 (47%), Gaps = 4/268 (1%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL+ N+++ Y K G + A++V +MPE+DV++W+ LI G+ D + + F MR
Sbjct: 584 NLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMR 643
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDK-GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G N +T+V++L C L K G +H +++ L +++SL+ MYA+CG +
Sbjct: 644 REGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQCGDL 703
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+ ++F K S WN++ A +G +E+L + M GV D+ ++ L+
Sbjct: 704 NTSSYIFDVLANKNSST--WNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFSVALA 761
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
+ ++ E + K G +D+ + G++ + ++ L IP +
Sbjct: 762 TIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRIL-PIPKIRSKR 820
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIEL 341
L++ HG A ++++L
Sbjct: 821 SWNILISALARHGFFRQATEAFHEMLDL 848
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 138/340 (40%), Gaps = 43/340 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKA---SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS 57
M GV P + A S C+ E IHGY+ K G S+ FV SL+H Y +
Sbjct: 239 MFENGVTPSSYVIASMVTACDRSGCM--TEGARQIHGYVVKCGLMSNVFVGTSLLHFYGT 296
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
G +S A ++F+ + E +++SW+ L+ Y
Sbjct: 297 H-------------------------------GSVSEANKLFEEIEEPNIVSWTSLMVCY 325
Query: 118 VRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
G E L ++ +R +G TM +V+ C G G + VI + L +
Sbjct: 326 ADNGHTKEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSS 385
Query: 178 V-LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
V + SL+ M+ +++EA VF + M+ D WNS+I A +G +ESL F M
Sbjct: 386 VSVANSLISMFGNYDSVEEASRVFNN--MQERDTISWNSIITASAHNGRFEESLGHFFWM 443
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
K D IT LL AC +K + K+G+ ++ + A+AG
Sbjct: 444 RRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSS 503
Query: 297 AEAYQFLCQIP----IQPTASMLGALLNGCMNHGKLDLAE 332
+A +P I + M + +G +H L L E
Sbjct: 504 EDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILLLVE 543
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/341 (22%), Positives = 148/341 (43%), Gaps = 38/341 (11%)
Query: 15 FLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK 74
FL K + + + +G A+H K + + F +N+L++MYS F I A+ VFD + +
Sbjct: 152 FLQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDR 211
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
N SWN+M+ G +VR G Y +A+ F M
Sbjct: 212 NDASWNNMISG-------------------------------FVRVGWYHKAMQFFCHMF 240
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
+G P+ + S++ AC G + +G R +H YV+ L + + TSL+ Y G++
Sbjct: 241 ENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYGTHGSV 300
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
EA +F ++ ++ W S++ +A +G KE L+++ + G+ T ++
Sbjct: 301 SEANKLFEE--IEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNGLICTGNTMATVIR 358
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-CMVDVMARAGQVAEAYQFLCQIPIQPTA 312
C G + + K+G+ S A ++ + V EA + + + T
Sbjct: 359 TCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTI 418
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
S +++ ++G+ + E++G H Y+ +S
Sbjct: 419 SW-NSIITASAHNGRFE--ESLGHFFWMRRTHPKTDYITIS 456
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 93/186 (50%), Gaps = 2/186 (1%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
G+ ++ NS++ + + A +VF+ M E+D +SW+ +I G ++E+L
Sbjct: 380 GLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGH 439
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F MR + PK + +T+ ++L AC L GR +H + + L + + SL+ MYA+
Sbjct: 440 FFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQ 499
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G+ ++A VF + M D+ WNSM+ G ++ L EM + +T+
Sbjct: 500 AGSSEDAELVFHT--MPARDLISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFT 557
Query: 250 NLLSAC 255
LSAC
Sbjct: 558 TALSAC 563
>IMGA|Medtr5g025610.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 10247630-10244364 E
EGN_Mt090430 20090702
Length = 995
Score = 217 bits (552), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/375 (33%), Positives = 194/375 (51%), Gaps = 38/375 (10%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D +T + A A + G ++H K+ + SD V NSLI MY RDI +ARKVF
Sbjct: 609 DSITLVNVLSAVANIELLNQGKSLHSLALKSPFGSDTRVQNSLITMYDRCRDINSARKVF 668
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+ NL +WN C+I + EAL
Sbjct: 669 KFHSISNLCTWN-------------------------------CMISALSHNKESREALE 697
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F ++ KPNE T+VSVL AC +G L G+ +H Y + +LVD+Y+
Sbjct: 698 LFRHLQF---KPNEFTIVSVLSACTRIGVLIHGKQVHGYTFRYGYQQNSFISAALVDLYS 754
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
CG + A+ VFR S WNSMI + HG +++++LF EM +G+K + T+
Sbjct: 755 TCGRLDNAVKVFRHSQKSES---AWNSMIAAYGNHGNGEKAIELFHEMCDLGIKVTKSTF 811
Query: 249 LNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
++LLSAC+H GLV + +++C L K G+ P++EH +V+++AR+G++ EAYQF +
Sbjct: 812 VSLLSACSHSGLVNQGLQYYECMLEKYGIKPEAEHQVYVVNMLARSGRIDEAYQFTKGLQ 871
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARS 367
++ + G LL+ C HG+L+L + V KL E+EP G Y+ L+N+Y W A
Sbjct: 872 SNASSGVWGMLLSVCNYHGELELGKKVAEKLFEMEPQNVGYYISLANMYVAAGSWKDATD 931
Query: 368 MREAMERMGVKKSPG 382
+R+ + G++K G
Sbjct: 932 LRQYIHDQGLRKCAG 946
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 123/251 (49%), Gaps = 37/251 (14%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVS--NSLIHMYSSFRDIPNARK 66
DH++ A + L + G IHG K GY+ + FVS NSLI +YS + A
Sbjct: 300 DHVSLSCAISACSSLGELAFGECIHGQGIKLGYKDNSFVSVANSLISLYSQCEAVDVAET 359
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VF + K++VSWN+M++GYA +I + FDLM
Sbjct: 360 VFREMAYKDIVSWNAMMEGYASNENI---HEAFDLMV----------------------- 393
Query: 127 LAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-PLTLVLRTSLV 184
EM+ +G +P+ VT+ ++L CA L +GR +H Y I + P L LR L+
Sbjct: 394 -----EMQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRRHMVPDHLPLRNGLI 448
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMY+KC +++A +F S D+ WN+MI G++ + +++ +LF E+ G
Sbjct: 449 DMYSKCNVVEKAELLFHS--TAQIDLVSWNAMISGYSQNKYYEKAQNLFKELLCCGQNCS 506
Query: 245 EITYLNLLSAC 255
T +LS+C
Sbjct: 507 SSTVFAILSSC 517
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 166/353 (47%), Gaps = 31/353 (8%)
Query: 35 YITKAGYESDRFVSNSLIHMYSSFRDIPN--ARKVFDGIPVK-----NLVSWNSMLDGYA 87
+ K + RF S +L+ + S+ + N +V + +K ++ N++++ YA
Sbjct: 185 FFQKMIKDQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYA 244
Query: 88 KCGDI--SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
KCGD+ S + +F+ M +DV+SW+ ++ G + GD +++L F M S + + V++
Sbjct: 245 KCGDVNSSDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSL 304
Query: 146 VSVLCACAHLGALDKGRMMHHYVI-----DNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
+ AC+ LG L G +H I DN + + SL+ +Y++C A+ A VF
Sbjct: 305 SCAISACSSLGELAFGECIHGQGIKLGYKDNSF---VSVANSLISLYSQCEAVDVAETVF 361
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV-KPDEITYLNLLSACAHGG 259
R M D+ WN+M+ G+A + + E+ DL EM G +PD +T +L CA
Sbjct: 362 RE--MAYKDIVSWNAMMEGYASNENIHEAFDLMVEMQTTGCFQPDIVTLTTMLPLCAELM 419
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYAC---MVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
L +E + M P +H ++D+ ++ V E + L Q
Sbjct: 420 LYREGRTIHGYAIRRHMVP--DHLPLRNGLIDMYSKCN-VVEKAELLFHSTAQIDLVSWN 476
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMR 369
A+++G + + A+ + ++L+ G+ S V+AI + A S+
Sbjct: 477 AMISGYSQNKYYEKAQNLFKELLCC-----GQNCSSSTVFAILSSCNSANSLN 524
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 104/201 (51%), Gaps = 4/201 (1%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
L + S+ Y+K GD + +R +F+ + +DV++W+ +I + Y A+ F++M
Sbjct: 132 LPTSTSLFTLYSKAGDFTSSRVLFEHIHNRDVIAWNAIISASLENKCYRTAVEFFQKMIK 191
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
+ + T++ V+ +HL +GR++H I + + + + L +L++MYAKCG +
Sbjct: 192 DQTRFDSTTLLLVVSTLSHLKNFGQGRVIHCVSIKSGMLVDISLCNALINMYAKCGDVNS 251
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
+ M+ DV WNS++ G +G +++SL F M+ + D ++ +SAC
Sbjct: 252 SDSECLFEEMEYKDVVSWNSIMRGCLYNGDLEKSLCYFRRMNFSEERADHVSLSCAISAC 311
Query: 256 AHGGLVKEAWYFFDCLGKNGM 276
+ G + F +C+ G+
Sbjct: 312 SSLGELA----FGECIHGQGI 328
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 119/265 (44%), Gaps = 33/265 (12%)
Query: 1 MLRVGVF-PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M G F PD +T + A L+ G IHGY + HM
Sbjct: 395 MQTTGCFQPDIVTLTTMLPLCAELMLYREGRTIHGYAIRR-------------HM----- 436
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
+P D +P++N ++D Y+KC + A +F + D++SW+ +I GY +
Sbjct: 437 -VP------DHLPLRN-----GLIDMYSKCNVVEKAELLFHSTAQIDLVSWNAMISGYSQ 484
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
Y++A +F+E+ G + T+ ++L +C +L+ G+ +H + + + +L
Sbjct: 485 NKYYEKAQNLFKELLCCGQNCSSSTVFAILSSCNSANSLNFGKSVHIWQLKSGFLNHTLL 544
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI- 238
SL+ MY G + + + +D+ WN++I G +E+L+ F M
Sbjct: 545 VNSLMQMYINSGDLTSGFSILQEN-SSIADIASWNTIIVGCVRGDQFQEALETFMLMRQG 603
Query: 239 VGVKPDEITYLNLLSACAHGGLVKE 263
D IT +N+LSA A+ L+ +
Sbjct: 604 PSFNYDSITLVNVLSAVANIELLNQ 628
>IMGA|Medtr5g079480.1 Jacalin-related lectin
chr05_pseudomolecule_IMGAG_V3 29634074-29640612 E
EGN_Mt090430 20090702
Length = 1484
Score = 214 bits (545), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 139/468 (29%), Positives = 227/468 (48%), Gaps = 51/468 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M GV +++T A A A L +GL IH K + V NSLI MY D
Sbjct: 345 MFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGD 404
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD-------------- 106
+ A+ +FD + +++ SWNS++ GY + G A ++F M E D
Sbjct: 405 LKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITG 464
Query: 107 --------------------------VLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
SW+ LI G+V+ G D+AL +F M+ P
Sbjct: 465 YMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILP 524
Query: 141 NEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
N VT++S+L CA+L A K + +H + + L L + L+D YAK G + + ++F
Sbjct: 525 NSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLMYSKNIF 584
Query: 201 RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
+ D WNSM+ + HG + +LDLF +M G++P+ T+ ++L A H G+
Sbjct: 585 NE--LSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAYGHAGM 642
Query: 261 VKEAWYFFDCLGKNGMTPKS-EHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
V E F C+ K+ + + EHY+ MV ++ R+G++AEA F+ +PI+P +S+ GALL
Sbjct: 643 VDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDFIQSMPIEPNSSVWGALL 702
Query: 320 NGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKK 379
C H +A G++++E EP + LS Y++ ++ E V K
Sbjct: 703 TACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQAYSLCGKF-------EPEGEKAVNK 755
Query: 380 SPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK-HIVDYE 426
G S++E + +H FV D+S+P ++++ L + +K H+ D E
Sbjct: 756 PIGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRVAVNVKTHVSDNE 803
Score = 145 bits (366), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/367 (26%), Positives = 174/367 (47%), Gaps = 45/367 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R GV PD P + +A E G IH + + G + + NS++ +Y+ +
Sbjct: 174 MMRDGVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGE 233
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ--------------- 105
+ A+K+FD + ++ V+WN+M+ G+ + G+I A++ FD M +
Sbjct: 234 MDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISC 293
Query: 106 ------------------------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
DV +W+ +I G+ +KG AL + +EM ++G + N
Sbjct: 294 YNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAGVEAN 353
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
+T+ S ACA L +L G +H + L +++ SL+DMY KCG ++ A H+F
Sbjct: 354 NITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFD 413
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+M DV+ WNS+IGG+ G ++ +LF +M P+ IT+ +++ G
Sbjct: 414 --MMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYMQSGAE 471
Query: 262 KEAWYFFDCLGKNGMTPK-SEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGA 317
+A F + K+G T + + + ++ ++GQ +A Q + I P + + +
Sbjct: 472 DQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNSVTILS 531
Query: 318 LLNGCMN 324
+L C N
Sbjct: 532 ILPVCAN 538
Score = 112 bits (280), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 111/227 (48%), Gaps = 20/227 (8%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YAKCG + MAR+VF+ M +++ +WS +I G R + E + +F M G P+E +
Sbjct: 127 YAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLL 186
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
VL AC L+ GR++H VI + + LR S++ +YAKCG + A +F M
Sbjct: 187 PKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIFD--CM 244
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC----AHGGLV 261
D WN+MI GF +G + ++ F M GV+P +T+ N+L +C H L
Sbjct: 245 DERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTW-NILISCYNQLGHCDLA 303
Query: 262 -----KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
K W+ G+ P + M+ + G+++ A L
Sbjct: 304 IDLMRKMEWF--------GIAPDVYTWTSMISGFTQKGRISHALDLL 342
>IMGA|AC233070_28.1 Pentatricopeptide repeat AC233070.4
117139-119514 H EGN_Mt090430 20090702
Length = 791
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 210/422 (49%), Gaps = 41/422 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV+P+ +TF L A + GL +HG K+ S++ VSNSLI MY+ F
Sbjct: 381 GVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFES---- 436
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
I ++++F+ + Q +SW+ LI GY + G
Sbjct: 437 ---------------------------IQESKKIFEELNYQGTISWNALISGYAQNGLCK 469
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLG--ALDKGRMMHHYVIDNELPLTLVLRTS 182
EA F + KPN+ T SVL A A +L G+ H ++I L + +
Sbjct: 470 EAFLTFLSA-IKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGA 528
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+DMY K G I E+ VF K F W MI +A HG + + L+ E+ G
Sbjct: 529 LLDMYGKRGNINESQRVFNETPEKTQ--FSWTGMISAYARHGDYESVMSLYKEIEREGSN 586
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
D IT+L++L+AC G+V FD + K+ + P EHY+ MVD++ R G++ EA +
Sbjct: 587 LDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEE 646
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ QIP P S+L +LL C HG +++AE V LI+++P G YV ++N+YA
Sbjct: 647 LMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGN 706
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGA----LHRFVAHDKSHPSSEQIYMMLGFIVS 417
W+K +R+ M GVKK G+S+V++ LH F + DKSHP SE I M F+
Sbjct: 707 WEKVAEVRKGMRGRGVKKEVGFSWVDVANVDSLHLHGFSSGDKSHPESETIDRMAEFLGL 766
Query: 418 QM 419
QM
Sbjct: 767 QM 768
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 144/328 (43%), Gaps = 42/328 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R G+ DH++ A E G IHG K GY + V N LI YS +
Sbjct: 281 MVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKV 340
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A+ VF + +N+VSW +++ + E++V+S
Sbjct: 341 LRDAKAVFQDMSARNVVSWTTLIS-----------------IDEENVVS----------- 372
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+F MRV G PN+VT + +L A + +G M+H + + L +
Sbjct: 373 --------LFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVS 424
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+ MYAK +IQE+ +F + WN++I G+A +GL KE+ F I
Sbjct: 425 NSLITMYAKFESIQESKKIFEE--LNYQGTISWNALISGYAQNGLCKEAFLTFLSA-IKE 481
Query: 241 VKPDEITYLNLLSACAHGGLV--KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+KP++ T+ ++L+A A + K L K G+ ++D+ + G + E
Sbjct: 482 IKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINE 541
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ + + P + S G +++ HG
Sbjct: 542 SQRVFNETPEKTQFSWTG-MISAYARHG 568
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 169/427 (39%), Gaps = 94/427 (22%)
Query: 4 VGVFPDHLTFPFLAKA---------SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHM 54
+ VF + FPFL AC + LG IHG++ G+ S VSNSL+ M
Sbjct: 69 LSVFKNQTQFPFLQNIDEVTLALSFKACRGEFILGAQIHGFVVATGFVSRVTVSNSLMKM 128
Query: 55 YSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD-------ISMARQVFDLMPEQDV 107
Y A VF+G+ ++VSWN++L G+ K D + + VFD +
Sbjct: 129 YCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTA 188
Query: 108 LSW----------------------------------SCLIDGYVRKGDYDEALAVFEEM 133
LS+ + L+ Y R G DEA VF EM
Sbjct: 189 LSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEM 248
Query: 134 RV---------------------------------SGPKPNEVTMVSVLCACAHLGALDK 160
+ G + V++ + AC + L+
Sbjct: 249 TIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEF 308
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G+ +H + + L+ Y+KC +++A VF+ M +V W ++I
Sbjct: 309 GKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQD--MSARNVVSWTTLI--- 363
Query: 221 ACHGLVKES-LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+ +E+ + LF+ M + GV P+++T++ LL A +VKE K+ ++ +
Sbjct: 364 ---SIDEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSE 420
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA-ETVGRKL 338
++ + A+ + E+ + ++ Q T S AL++G +G A T +
Sbjct: 421 QNVSNSLITMYAKFESIQESKKIFEELNYQGTISW-NALISGYAQNGLCKEAFLTFLSAI 479
Query: 339 IELEPHQ 345
E++P+Q
Sbjct: 480 KEIKPNQ 486
>IMGA|Medtr8g151370.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 37296223-37298433 H
EGN_Mt090430 20090702
Length = 736
Score = 213 bits (541), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 210/422 (49%), Gaps = 41/422 (9%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV+P+ +TF L A + GL +HG K+ S++ VSNSLI MY+ F
Sbjct: 326 GVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFES---- 381
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
I ++++F+ + Q +SW+ LI GY + G
Sbjct: 382 ---------------------------IQESKKIFEELNYQGTISWNALISGYAQNGLCK 414
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLG--ALDKGRMMHHYVIDNELPLTLVLRTS 182
EA F + KPN+ T SVL A A +L G+ H ++I L + +
Sbjct: 415 EAFLTFLSA-IKEIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGA 473
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
L+DMY K G I E+ VF K F W MI +A HG + + L+ E+ G
Sbjct: 474 LLDMYGKRGNINESQRVFNETPEKTQ--FSWTGMISAYARHGDYESVMSLYKEIEREGSN 531
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
D IT+L++L+AC G+V FD + K+ + P EHY+ MVD++ R G++ EA +
Sbjct: 532 LDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLDEAEE 591
Query: 302 FLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
+ QIP P S+L +LL C HG +++AE V LI+++P G YV ++N+YA
Sbjct: 592 LMHQIPGGPGLSVLQSLLGSCKLHGNVEMAERVVDSLIQMDPGSSGPYVLMANLYAEKGN 651
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGA----LHRFVAHDKSHPSSEQIYMMLGFIVS 417
W+K +R+ M GVKK G+S+V++ LH F + DKSHP SE I M F+
Sbjct: 652 WEKVAEVRKGMRGRGVKKEVGFSWVDVANVDSLHLHGFSSGDKSHPESETIDRMAEFLGL 711
Query: 418 QM 419
QM
Sbjct: 712 QM 713
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/328 (25%), Positives = 144/328 (43%), Gaps = 42/328 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R G+ DH++ A E G IHG K GY + V N LI YS +
Sbjct: 226 MVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKV 285
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A+ VF + +N+VSW +++ + E++V+S
Sbjct: 286 LRDAKAVFQDMSARNVVSWTTLIS-----------------IDEENVVS----------- 317
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+F MRV G PN+VT + +L A + +G M+H + + L +
Sbjct: 318 --------LFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVS 369
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
SL+ MYAK +IQE+ +F + WN++I G+A +GL KE+ F I
Sbjct: 370 NSLITMYAKFESIQESKKIFEE--LNYQGTISWNALISGYAQNGLCKEAFLTFLSA-IKE 426
Query: 241 VKPDEITYLNLLSACAHGGLV--KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+KP++ T+ ++L+A A + K L K G+ ++D+ + G + E
Sbjct: 427 IKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDMYGKRGNINE 486
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ + + P + S G +++ HG
Sbjct: 487 SQRVFNETPEKTQFSWTG-MISAYARHG 513
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/427 (22%), Positives = 169/427 (39%), Gaps = 94/427 (22%)
Query: 4 VGVFPDHLTFPFLAKA---------SACLLKRELGLAIHGYITKAGYESDRFVSNSLIHM 54
+ VF + FPFL AC + LG IHG++ G+ S VSNSL+ M
Sbjct: 14 LSVFKNQTQFPFLQNIDEVTLALSFKACRGEFILGAQIHGFVVATGFVSRVTVSNSLMKM 73
Query: 55 YSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGD-------ISMARQVFDLMPEQDV 107
Y A VF+G+ ++VSWN++L G+ K D + + VFD +
Sbjct: 74 YCKAGRFELALCVFEGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTA 133
Query: 108 LSW----------------------------------SCLIDGYVRKGDYDEALAVFEEM 133
LS+ + L+ Y R G DEA VF EM
Sbjct: 134 LSFCWDRDYWDDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEM 193
Query: 134 RV---------------------------------SGPKPNEVTMVSVLCACAHLGALDK 160
+ G + V++ + AC + L+
Sbjct: 194 TIRDLVSWNAMLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEF 253
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
G+ +H + + L+ Y+KC +++A VF+ M +V W ++I
Sbjct: 254 GKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQD--MSARNVVSWTTLI--- 308
Query: 221 ACHGLVKES-LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
+ +E+ + LF+ M + GV P+++T++ LL A +VKE K+ ++ +
Sbjct: 309 ---SIDEENVVSLFNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSE 365
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA-ETVGRKL 338
++ + A+ + E+ + ++ Q T S AL++G +G A T +
Sbjct: 366 QNVSNSLITMYAKFESIQESKKIFEELNYQGTISW-NALISGYAQNGLCKEAFLTFLSAI 424
Query: 339 IELEPHQ 345
E++P+Q
Sbjct: 425 KEIKPNQ 431
>IMGA|Medtr5g018430.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 6707850-6709994 H
EGN_Mt090430 20090702
Length = 714
Score = 204 bits (518), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 204/402 (50%), Gaps = 34/402 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T+ + A+ G +HG + KAG+ FV ++L+ MY ++ A +V
Sbjct: 315 PDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALRV 374
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
F IP K D + W+ +I GY + D A+
Sbjct: 375 FCSIPGK-------------------------------DAILWTEMITGYSKMADGMGAI 403
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
F EM + ++ + VL CA+L L +G ++H Y + + + SL+DMY
Sbjct: 404 RCFSEMHHEVHEIDDYVLSGVLSVCAYLAILRQGEIIHCYAYKLGYDVEMSVSGSLIDMY 463
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
AK G ++ A VF S + P D+ WNSM+GGF+ HG+V ++L LF E+ G+ PD++T
Sbjct: 464 AKNGNLEAAYLVF-SQVSHP-DLKCWNSMLGGFSHHGMVDDALKLFEEIIKQGLVPDQVT 521
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+L+LLSAC+H LV++ ++ + G+ P +HY+CMV +++RA + EA + + + P
Sbjct: 522 FLSLLSACSHSRLVEQGKLLWNYMSSIGLVPGPKHYSCMVTLLSRAALLEEAEEIINKSP 581
Query: 308 -IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
++ + LL+ C+ + L + +++ + LSN+YA RWD+
Sbjct: 582 YVEDNVELWRTLLSACVINKNLKVGVRAAEEVLRFNAEDGPTLILLSNLYAAAGRWDEVA 641
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQI 408
+R M+ + ++K PG S++E +H F + D+SHP +Q+
Sbjct: 642 EIRRNMKGLIMEKEPGLSWIEAKNDIHVFSSGDQSHPKVDQV 683
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 123/255 (48%), Gaps = 34/255 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ P ++T L +A++ +GL +H K G+ +D V SL++MYSS
Sbjct: 105 MENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSS--- 161
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
C D+S A VF M E+D ++W+ LI GY++
Sbjct: 162 ----------------------------CMDLSSAESVFCDMNERDNVAWNSLILGYLKN 193
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
++ + +F EM G P T +L AC+ L GR++H VI + L L+
Sbjct: 194 DKIEKGVYLFIEMMWVGFTPTVYTFCMILSACSRLKDYFSGRLIHARVIVGNVSPDLHLQ 253
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+LVDMY G Q A +F M+ D+ WNSMI G+ + +++++LF ++ +
Sbjct: 254 NALVDMYCNAGDTQTAYMIFSR--MEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALC 311
Query: 241 V-KPDEITYLNLLSA 254
KPD+ TY ++SA
Sbjct: 312 FPKPDDYTYAGIISA 326
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 143/305 (46%), Gaps = 7/305 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR-VSGP 138
N+++D Y GD A +F M + D++SW+ +I GY D ++A+ +F +++ + P
Sbjct: 254 NALVDMYCNAGDTQTAYMIFSRMEKWDLVSWNSMISGYFENEDGEKAMNLFVQLKALCFP 313
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KP++ T ++ A G+ +H VI ++ + ++LV MY K + AL
Sbjct: 314 KPDDYTYAGIISATGAFPCFSYGKPLHGQVIKAGFVRSVFVGSTLVSMYFKNQETEAALR 373
Query: 199 VFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
VF S + D +W MI G++ ++ FSEMH + D+ +LS CA+
Sbjct: 374 VFCS--IPGKDAILWTEMITGYSKMADGMGAIRCFSEMHHEVHEIDDYVLSGVLSVCAYL 431
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
++++ K G + ++D+ A+ G + AY Q+ P ++
Sbjct: 432 AILRQGEIIHCYAYKLGYDVEMSVSGSLIDMYAKNGNLEAAYLVFSQVS-HPDLKCWNSM 490
Query: 319 LNGCMNHGKLDLAETVGRKLIE--LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
L G +HG +D A + ++I+ L P Q ++ L + + R ++ + + M +G
Sbjct: 491 LGGFSHHGMVDDALKLFEEIIKQGLVPDQ-VTFLSLLSACSHSRLVEQGKLLWNYMSSIG 549
Query: 377 VKKSP 381
+ P
Sbjct: 550 LVPGP 554
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 114/235 (48%), Gaps = 4/235 (1%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD--EALAVFE 131
K+ +N+++ Y++CG + A QVFD MP++ +S++ L+ Y R + A ++
Sbjct: 44 KSAFLYNNIISMYSRCGSLEDAHQVFDKMPQRTHVSYNALLAAYSRVSEQHCVYAFNLYT 103
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
+M G +P+ +T+ S+L A + G L G ++H + + ++TSL++MY+ C
Sbjct: 104 QMENMGLRPSNMTITSLLQAASLHGDLLIGLLLHAKSLKFGFLNDICVQTSLLNMYSSCM 163
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
+ A VF M D WNS+I G+ + +++ + LF EM VG P T+ +
Sbjct: 164 DLSSAESVFCD--MNERDNVAWNSLILGYLKNDKIEKGVYLFIEMMWVGFTPTVYTFCMI 221
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
LSAC+ + ++P +VD+ AG AY ++
Sbjct: 222 LSACSRLKDYFSGRLIHARVIVGNVSPDLHLQNALVDMYCNAGDTQTAYMIFSRM 276
>IMGA|Medtr5g008760.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 1704203-1701844 E
EGN_Mt090430 20090702
Length = 764
Score = 203 bits (517), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 115/357 (32%), Positives = 194/357 (54%), Gaps = 12/357 (3%)
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VFD + N+++ Y++C D++ A +F + E+ +++W+ ++ G+ +E
Sbjct: 361 VFDNVK-------NTLITMYSRCRDLNHAYLLFRKIDEKGLITWNAMLSGFAHMDRSEEV 413
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT--LVLRTSLV 184
+ EM G +PN VT+ S+L CA + L G+ H Y++ E L+L SLV
Sbjct: 414 SFLLREMLREGVEPNYVTIASILPLCARIANLQHGKEFHCYMVKREEQFKGYLLLWNSLV 473
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MY++ G + EA VF S + D + SMI G+ G + +L LF+EM + +KPD
Sbjct: 474 EMYSRSGKVLEARKVFDS--LSRKDEVTYTSMIMGYGVSGDGETALKLFAEMRRLNIKPD 531
Query: 245 EITYLNLLSACAHGGLVKEAWYFF-DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+T + +L AC+H GLV + F + G+ P+ EHY+CMVD+ RAG + +A + +
Sbjct: 532 HVTMVAVLIACSHSGLVAQGQVLFRKMIEVYGIDPRVEHYSCMVDLFGRAGLLDKAKEVI 591
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+ +PT+++ L+ C HG + E KL+E++P G Y+ ++N+YA R D
Sbjct: 592 TGMSCKPTSAIWATLIGACKIHGNTVIGEWAAGKLLEMKPDHSGYYLLIANMYAAANRLD 651
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
K R M G K++PG ++V++ L F+A D S+P S +I M+ + MK
Sbjct: 652 KEAEARTYMRDSGAKRTPGCAWVDVGRELCPFLAGDTSNPRSCEISPMMKRLNILMK 708
Score = 143 bits (361), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/312 (29%), Positives = 164/312 (52%), Gaps = 19/312 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML GV PD T+P + KA LL + G+A+H I ++ + FV N+L+ MY F
Sbjct: 184 MLSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGK 243
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
+ AR++FD +P ++ VSWN+M+ YA G A ++F M E++++ W+ + G
Sbjct: 244 LEVARELFDIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAGG 303
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ G++ AL +F +MR + + + V MV L AC+H+GA+ G+ +H + + +
Sbjct: 304 CLHTGNFKGALKLFSQMR-AVIQLDSVAMVVGLNACSHIGAVKLGKEIHGHAVRTCFDVF 362
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
++ +L+ MY++C + A +FR + + WN+M+ GFA +E L EM
Sbjct: 363 DNVKNTLITMYSRCRDLNHAYLLFRK--IDEKGLITWNAMLSGFAHMDRSEEVSFLLREM 420
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYA-------CMVDV 289
GV+P+ +T ++L CA ++ F C M + E + +V++
Sbjct: 421 LREGVEPNYVTIASILPLCARIANLQHG-KEFHCY----MVKREEQFKGYLLLWNSLVEM 475
Query: 290 MARAGQVAEAYQ 301
+R+G+V EA +
Sbjct: 476 YSRSGKVLEARK 487
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 2/195 (1%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
+N + + +++ YA ++ A+ V + D L W+ +I YV+ +++A++V+ M
Sbjct: 125 QNPILVSKLINFYASVDLLADAQIVAECSNSFDPLHWNMVISLYVKNCLFEDAISVYRRM 184
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
G P++ T SVL AC L D G +H + ++ + +L + +LV MY + G +
Sbjct: 185 LSKGVIPDDYTYPSVLKACGELLDYDSGVAVHKAIQESSIKWSLFVHNALVFMYGRFGKL 244
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+ A +F +M D WN+MI +A GL E+ LF M G++ + I + +
Sbjct: 245 EVARELF--DIMPARDDVSWNTMISCYASRGLWDEAFRLFGCMREAGIERNIIIWNTIAG 302
Query: 254 ACAHGGLVKEAWYFF 268
C H G K A F
Sbjct: 303 GCLHTGNFKGALKLF 317
>IMGA|Medtr2g024580.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 6280462-6284726 E
EGN_Mt090430 20090702
Length = 769
Score = 202 bits (514), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 118/338 (34%), Positives = 186/338 (55%), Gaps = 17/338 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
NL +++D YAK G I +AR+VFD + E+DV+ W+CLI Y R +EA+A+ + MR
Sbjct: 245 NLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCLVEEAVALLQSMR 304
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
G KPN T+V +L + G++ R + + + +L L ++L T+LVD+YAKCG +
Sbjct: 305 QEGVKPNSSTLVGLLSVYSASGSMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLD 364
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
EA+ +F M+ DV W ++I G HG ++ LF+ M G +P+EIT+L +L+A
Sbjct: 365 EAMEIFER--MENKDVKSWTAVISGHGIHGQAINAISLFNRMENEGFRPNEITFLAILTA 422
Query: 255 CAHGGLVKEAWYFFD-CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
C+HGGLV E FF + ++G +P EHY C++D++ RAG + EA++ + +PI+ A+
Sbjct: 423 CSHGGLVTEGVEFFKRMVQEHGFSPWVEHYGCLIDLLGRAGMLHEAFELIKSLPIKGDAT 482
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIEL-EPHQDGRYVGLSNVYAIFRRWDKARSMRE-- 370
LL+ C HG + L E V L PH + +S YA R M+E
Sbjct: 483 SWRTLLSACRVHGDVKLGECVKDVLSNFYTPHPTDSLL-ISGTYAAAGRISDLTRMQEMK 541
Query: 371 ----AMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPS 404
++ V ++ G S + M + K+ PS
Sbjct: 542 QTNVTLDNYRVPETEGESMLSMK------LGEGKNEPS 573
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/318 (29%), Positives = 149/318 (46%), Gaps = 37/318 (11%)
Query: 13 FPFLAKASACLLKRELGLA--IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDG 70
F F+A AC E+G +HG + K+G +RF F D+ N
Sbjct: 110 FSFIAVMKACGRSFEVGFGRGVHGIVVKSG---NRF-----------FVDLNN------- 148
Query: 71 IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-DVLSWSCLIDGYVRKGDYDEALAV 129
++L Y CG I AR+VFD PE+ D++SW+ L+ G V DY +
Sbjct: 149 ----------TILQFYCVCGRIDDARKVFDECPERNDLVSWNILMGGCVLVSDYSFVFDL 198
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
F + SG + + T +S+L A +G+ G+ +H Y I L + T+L+DMYAK
Sbjct: 199 FLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGYCIKIGFCCNLNVVTALIDMYAK 258
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
G I A VF + K DV +WN +I +A LV+E++ L M GVKP+ T +
Sbjct: 259 TGCIYLARKVFDGVVEK--DVVLWNCLIKNYARSCLVEEAVALLQSMRQEGVKPNSSTLV 316
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ 309
LLS + G ++ Y + + + +VDV A+ G + EA + ++ +
Sbjct: 317 GLLSVYSASGSMQGVRYVTSLIEEEKLELDVILGTALVDVYAKCGFLDEAMEIFERMENK 376
Query: 310 PTASMLGALLNGCMNHGK 327
S A+++G HG+
Sbjct: 377 DVKSWT-AVISGHGIHGQ 393
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 136/328 (41%), Gaps = 46/328 (14%)
Query: 91 DISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
D++ A +F + ++ ++ ++ GY ++AL +F ++R SG + + ++V+
Sbjct: 58 DMNYASTIFTCIQNPNLFMYNTMLRGYSVSNSSNKALPIFNKLRNSGNGLDPFSFIAVMK 117
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV 210
AC + GR +H V+ + + L +++ Y CG I +A VF + +D+
Sbjct: 118 ACGRSFEVGFGRGVHGIVVKSGNRFFVDLNNTILQFYCVCGRIDDARKVFDE-CPERNDL 176
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGG 259
WN ++GG DLF + G++ T L+LLSA HG
Sbjct: 177 VSWNILMGGCVLVSDYSFVFDLFLKRGCSGIRASVATTLSLLSAAGDIGSFVLGKSLHGY 236
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYA------------------------CMVDVMARAGQ 295
+K + C N +T + YA C++ AR+
Sbjct: 237 CIKIGF----CCNLNVVTALIDMYAKTGCIYLARKVFDGVVEKDVVLWNCLIKNYARSCL 292
Query: 296 VAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG- 351
V EA Q + Q ++P +S L LL+ G + V LIE E + +G
Sbjct: 293 VEEAVALLQSMRQEGVKPNSSTLVGLLSVYSASGSMQGVRYV-TSLIEEEKLELDVILGT 351
Query: 352 -LSNVYAIFRRWDKARSMREAMERMGVK 378
L +VYA D+A + E ME VK
Sbjct: 352 ALVDVYAKCGFLDEAMEIFERMENKDVK 379
>IMGA|Medtr5g008890.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 1785396-1780947 E
EGN_Mt090430 20090702
Length = 734
Score = 201 bits (510), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 117/381 (30%), Positives = 190/381 (49%), Gaps = 34/381 (8%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T + + A L E G +H K G+ D +V++SLI++YS
Sbjct: 305 PDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGFYDDVYVASSLINVYS----------- 353
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
KCG + +++ VF + E DV+ W+ +I G+ +AL
Sbjct: 354 --------------------KCGKMEVSKHVFSKLSELDVVCWNSMIAGFSINSLEQDAL 393
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
A F+ MR G P+E + ++ +CA L +L +G+ +H +I + + + +SLV+MY
Sbjct: 394 ACFKRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMY 453
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
KCG + A + F +M ++ WN MI G+A +G E++ L+ +M G KPD+IT
Sbjct: 454 CKCGDVGAARYYF--DMMPGKNIVTWNEMIHGYAHNGYGLEAVSLYKDMISSGEKPDDIT 511
Query: 248 YLNLLSACAHGGLVKEAWYFFDC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
++ +L+AC+H LV E F L K + PK +HY C++D + R G+ E L +
Sbjct: 512 FVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDHYTCIIDCLGRVGRFNEVEVILDTM 571
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
P + + +L+ C H + LA+ +L L P YV L+N+Y+ RWD A+
Sbjct: 572 PYKDDTIVWEVVLSSCRVHANVSLAKRAAEELHRLNPRNSAPYVLLANMYSSMGRWDDAQ 631
Query: 367 SMREAMERMGVKKSPGYSFVE 387
+R+ M + K PGYS E
Sbjct: 632 VVRDLMSDNQIHKDPGYSRSE 652
Score = 146 bits (368), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/314 (27%), Positives = 148/314 (47%), Gaps = 37/314 (11%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA- 87
G IH K G+E D + NSL+ MY+ D+ +A VF+ + ++VSWN M+ GY
Sbjct: 159 GKQIHTLAVKHGFERDLHLCNSLLDMYAKTGDMDSAENVFENLDKHSVVSWNIMISGYGN 218
Query: 88 ----------------------------------KCGDISMARQVFDLMPEQDVLSWSCL 113
K GD+ + RQ+FD M ++SW+ +
Sbjct: 219 RCDSEKALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMSSPSLISWNAI 278
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+ GY + D+ EA+ +F +M+ P+ T+ +L +CA LG L+ G+ +H
Sbjct: 279 LSGYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQVHAVSQKLGF 338
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+ + +SL+++Y+KCG ++ + HVF + DV WNSMI GF+ + L +++L F
Sbjct: 339 YDDVYVASSLINVYSKCGKMEVSKHVFSK--LSELDVVCWNSMIAGFSINSLEQDALACF 396
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
M G P E ++ + S+CA + + + K+G + +V++ +
Sbjct: 397 KRMRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKC 456
Query: 294 GQVAEAYQFLCQIP 307
G V A + +P
Sbjct: 457 GDVGAARYYFDMMP 470
Score = 121 bits (303), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 92/349 (26%), Positives = 158/349 (45%), Gaps = 52/349 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ V P H+TF + A L G HG + K G++S+ +VSN+L+ MY+
Sbjct: 18 MVYESVKPSHITFATVFSACGGLKDVNCGRRNHGLVLKVGFDSNIYVSNALLCMYTKCGL 77
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+A +VF+GI N V++ +M+ G ++ + ++F LM +RK
Sbjct: 78 NEDAFRVFEGIVEPNEVTFTTMMGGLSQTNQVKEGLELFRLM---------------LRK 122
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH---LGALD---------KGRMMHHYV 168
G + V + V++ ++L CA G D +G+ +H
Sbjct: 123 G-----ICV-----------DSVSLSTILVICAKGVSFGVCDDSRGLSTNAQGKQIHTLA 166
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ + L L SL+DMYAK G + A +VF + + V WN MI G+ ++
Sbjct: 167 VKHGFERDLHLCNSLLDMYAKTGDMDSAENVFEN--LDKHSVVSWNIMISGYGNRCDSEK 224
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+L+ F M G +PD++TY+N+L+AC G VK FDC+ +P + ++
Sbjct: 225 ALECFQRMQCCGYEPDDVTYINMLTACVKSGDVKVGRQIFDCMS----SPSLISWNAILS 280
Query: 289 VMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETV 334
++ EA + ++ Q P + L +L+ C G L+ + V
Sbjct: 281 GYNQSADHGEAVELFRKMQFQWQNPDRTTLAIILSSCAELGLLEAGKQV 329
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 107/238 (44%), Gaps = 33/238 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G FP +F +A + A L G IH I K GY + FV +SL+ MY D
Sbjct: 399 MRQFGFFPSEFSFATIASSCAKLSSLFQGQQIHAQIIKDGYVDNVFVGSSLVEMYCKCGD 458
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR FD +P KN+V+WN M+ GYA +GY
Sbjct: 459 VGAARYYFDMMPGKNIVTWNEMIHGYAH--------------------------NGYGL- 491
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVL 179
EA++++++M SG KP+++T V+VL AC+H +D+G + ++ E+ L
Sbjct: 492 ----EAVSLYKDMISSGEKPDDITFVAVLTACSHSALVDEGVEIFSSMLQKFEVVPKLDH 547
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
T ++D + G E + V + D +W ++ H V + E+H
Sbjct: 548 YTCIIDCLGRVGRFNE-VEVILDTMPYKDDTIVWEVVLSSCRVHANVSLAKRAAEELH 604
>IMGA|Medtr5g012750.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 3723414-3724973 H
EGN_Mt090430 20090702
Length = 519
Score = 200 bits (508), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 124/421 (29%), Positives = 211/421 (50%), Gaps = 36/421 (8%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R + D +F A A L +LG +IH K G +++ V+N LI MY +
Sbjct: 100 RSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVE 159
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS------------- 109
A ++F I K+++SWNS++ A G+I + + LMP DV+S
Sbjct: 160 RAVRIFSDIADKDVISWNSVIAACANNGNIGLGFKFLQLMPNPDVVSYNGLINGIAQAGK 219
Query: 110 ------------------WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
W+ +I G+V + EAL +F +M + + +E T +L
Sbjct: 220 IEDAVRILSTMPCPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQIDEFTFSIILNG 279
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF 211
A L AL G ++H I L ++V+ +SL+DMY+KCG + +A +F ++ ++
Sbjct: 280 IASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDMYSKCGQVNDAESIFN--VLSNRNLV 337
Query: 212 IWNSMIGGFACHGLVKESLDLFSEMHI-VGVKPDEITYLNLLSACAHGGLVKE--AWYFF 268
WN+MI G+A +G +++ LF + + KPD IT+LN++SAC+H + E YF
Sbjct: 338 SWNAMIYGYARNGDSAQAISLFELLKMERDTKPDGITFLNVISACSHSQIPFEMGIQYFD 397
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKL 328
+ + G+ P +H M+ +M + G+++ A + + ++ + + +LL C L
Sbjct: 398 AMINEYGIAPSIKHCCSMIRLMGQKGELSRAQKMIHELGFESCGVVWRSLLAACGTQEDL 457
Query: 329 DLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEM 388
+AE K+I LE +D YV LSN+YA F RW+ +R M + V+K G S++E+
Sbjct: 458 HVAEIAAAKVIGLERDEDYVYVMLSNMYASFGRWEDVNVIRSLMSKKRVRKEAGSSWIEV 517
Query: 389 H 389
+
Sbjct: 518 N 518
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 140/345 (40%), Gaps = 60/345 (17%)
Query: 16 LAKASACLLKRELGLAIHGYITKAGY-ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK 74
L + + L + G IH Y ++GY ++ +VS +LI Y +A +F IP
Sbjct: 11 LIRTATDLCFHKFGQQIHSYAIRSGYFHANIYVSTTLIKFYVKMHLFTHAHNLFVEIP-- 68
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR 134
+ +V+SW+ LI GYV G + +AL++F ++
Sbjct: 69 -----------------------------QPNVVSWNTLISGYVHAGQFKKALSLFTKLE 99
Query: 135 VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
S + + S + ACA L L G +H + + V+ L+DMY KCG+++
Sbjct: 100 RSQICADAFSFTSAMVACAQLSLLKLGSSIHSKTVKLGMDNNTVVANCLIDMYGKCGSVE 159
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
A+ +F + DV WNS+I A +G + M PD ++Y L++
Sbjct: 160 RAVRIFSD--IADKDVISWNSVIAACANNGNIGLGFKFLQLMP----NPDVVSYNGLING 213
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY-------------- 300
A G +++A + P S + ++ +V EA
Sbjct: 214 IAQAGKIEDAVRILSTMP----CPNSSSWNSVITGFVNRSRVPEALEMFGKMHLKNLQID 269
Query: 301 QFLCQIPIQPTASM----LGALLNGCMNHGKLDLAETVGRKLIEL 341
+F I + AS+ G L++ C LD + VG LI++
Sbjct: 270 EFTFSIILNGIASLSALTWGMLIHCCTIKYGLDSSIVVGSSLIDM 314
>IMGA|Medtr2g056180.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 15272851-15276812 H
EGN_Mt090430 20090702
Length = 667
Score = 198 bits (503), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 128/376 (34%), Positives = 187/376 (49%), Gaps = 38/376 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV PD TF + A A L G +HG + G+
Sbjct: 252 GVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGG--------------------- 290
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFD-LMPEQDVLSWSCLIDGYVRKGDY 123
N+V +S+LD Y KCG + +R VF+ L E++ +SW+ ++ Y + +Y
Sbjct: 291 ----------NVVVESSLLDMYGKCGCVRHSRIVFERLSDEKNNVSWTAMLGVYCQNKEY 340
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
L + E N VL AC+ L A++ G+ +H + +++ ++L
Sbjct: 341 QNVLDLVRER----GDLNFYAFGIVLRACSGLAAVNHGKEVHCMYVRKGGSKDVIIESAL 396
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
VD+YAKCG + A +F S M+ ++ WNSM+ GFA +G E+L LF +M G+KP
Sbjct: 397 VDLYAKCGMVDFACTMFAS--MEVRNLITWNSMVSGFAQNGRGVEALALFEDMIKEGIKP 454
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D IT++ +L AC+H GLV E F +G+ G+ P EHY CM+D++ RAG + EA L
Sbjct: 455 DSITFVAVLFACSHAGLVDEGRKVFTLMGEYGIKPVVEHYNCMIDLLGRAGFIDEAECLL 514
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+ S+ ALL C AE V RK+IELEP YV L+N+Y RWD
Sbjct: 515 ENADCRYDKSLWAALLGACTKCSDYRTAERVARKMIELEPDFHLSYVLLNNIYREVGRWD 574
Query: 364 KARSMREAMERMGVKK 379
A +R+ ME GVKK
Sbjct: 575 DALEIRKLMEDRGVKK 590
Score = 124 bits (310), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 122/240 (50%), Gaps = 36/240 (15%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP---NARKVFDGIPVKNLVSWNSMLDG 85
G ++H ++ K+G SDRFV NSL+ +Y P +AR +FD + VK+++SW S++ G
Sbjct: 69 GASVHAHVLKSGLHSDRFVGNSLLTLYFKLNPGPHLSHARHLFDSLHVKDVISWTSLISG 128
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y + +P Q ++++F EM +PN T+
Sbjct: 129 YTRSD-----------LPHQ--------------------SISLFYEMLAFPVQPNAFTL 157
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
SV+ AC+ L ++ GR H V+ V+ SL+DMY A+ +A VF +
Sbjct: 158 SSVIKACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRAVDDARRVFDELFV 217
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGLVKEA 264
K DVF W S+I F + + KESL F M+ V GV PD T+ +L+ACA+ GL+++
Sbjct: 218 K-DDVFCWTSIISCFTRNDMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQG 276
Score = 98.6 bits (244), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 108/236 (45%), Gaps = 32/236 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML V P+ T + KA + L LG H + G++ + VS SLI MY R
Sbjct: 145 MLAFPVQPNAFTLSSVIKACSALNDVNLGRCFHSMVLTRGFDWNTVVSCSLIDMYGWNRA 204
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +AR+VFD + VK+ DV W+ +I + R
Sbjct: 205 VDDARRVFDELFVKD------------------------------DVFCWTSIISCFTRN 234
Query: 121 GDYDEALAVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+ E+L F M RV G P+ T ++L ACA+LG L +G+ +H V+ +V+
Sbjct: 235 DMFKESLKFFYVMNRVRGVVPDGYTFGTILTACANLGLLRQGKEVHGKVVGLGFGGNVVV 294
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
+SL+DMY KCG ++ + VF L + W +M+G + + + LDL E
Sbjct: 295 ESSLLDMYGKCGCVRHSRIVFER-LSDEKNNVSWTAMLGVYCQNKEYQNVLDLVRE 349
>IMGA|Medtr7g139320.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 33306202-33304505 H
EGN_Mt090430 20090702
Length = 565
Score = 197 bits (502), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 123/417 (29%), Positives = 209/417 (50%), Gaps = 36/417 (8%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ LT+ A + L G IHG + K G +SD + ++L+ +YS
Sbjct: 162 VSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMDLYS--------- 212
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KCG + A Q+F+ E D +S + ++ + + G +E
Sbjct: 213 ----------------------KCGSLDAAWQIFESAEELDGVSLTVILVAFAQNGFEEE 250
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA-LDKGRMMHHYVIDNELPLTLVLRTSLV 184
A+ +F +M G + + MVS + +G L G+ +H +I + LV
Sbjct: 251 AIQIFTKMVALGMEV-DANMVSAVLGVFGVGTYLALGKQIHSLIIKKNFCENPFVGNGLV 309
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+MY+KCG + ++L VF M + WNS+I FA HG ++L + EM + GV P
Sbjct: 310 NMYSKCGDLSDSLLVFYQ--MTQKNSVSWNSVIAAFARHGDGFKALQFYEEMRVEGVAPT 367
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++T+L+LL AC+H GLV++ + + + G++P+SEHYAC+VD++ RAG + EA +F+
Sbjct: 368 DVTFLSLLHACSHAGLVEKGMELLESMTNDHGISPRSEHYACVVDMLGRAGHLNEAKKFI 427
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD 363
+P + ALL C HG ++ + +L P YV ++N+Y+ W
Sbjct: 428 EGLPEHGGVLVWQALLGACSIHGDSEMGKYAADRLFSAAPASPAPYVLMANIYSSEGNWK 487
Query: 364 KARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
+ S + M+ MGV K G S++E+ ++ FV DK HP ++ I+ +L ++ +K
Sbjct: 488 ERASSIKRMKEMGVAKEVGISWIEIEKKVNSFVVGDKLHPEADVIFWVLSGLLKHLK 544
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 113/225 (50%), Gaps = 9/225 (4%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP---KPNE 142
Y+KCG+ A VFD MP +D +SW+ +I G++R GD+D + F++M S + ++
Sbjct: 2 YSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDTSFKFFKQMTESNRVCCRFDK 61
Query: 143 VTMVSVLCACAHLG---ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
T+ ++L C L + +M+H V + + +L+ Y KC + V
Sbjct: 62 ATLTTMLSGCDGLRLGISTSVTQMIHGLVFVGGFEREITVGNALITSYFKCECFSQGRKV 121
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHG 258
F M +V W ++I G A + ++SL LF++M G V P+ +TYL+ L AC+
Sbjct: 122 FDE--MIERNVVTWTAVISGLAQNEFYEDSLRLFAQMRCCGSVSPNVLTYLSSLMACSGL 179
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
++++ L K GM + ++D+ ++ G + A+Q
Sbjct: 180 QVLRDGQKIHGLLWKLGMQSDLCIESALMDLYSKCGSLDAAWQIF 224
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 106/189 (56%), Gaps = 7/189 (3%)
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VF G + + N+++ Y KC S R+VFD M E++V++W+ +I G + Y+++
Sbjct: 90 VFVGGFEREITVGNALITSYFKCECFSQGRKVFDEMIERNVVTWTAVISGLAQNEFYEDS 149
Query: 127 LAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
L +F +MR G PN +T +S L AC+ L L G+ +H + + L + ++L+D
Sbjct: 150 LRLFAQMRCCGSVSPNVLTYLSSLMACSGLQVLRDGQKIHGLLWKLGMQSDLCIESALMD 209
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
+Y+KCG++ A +F S + D ++ FA +G +E++ +F++M +G++ D
Sbjct: 210 LYSKCGSLDAAWQIFESA--EELDGVSLTVILVAFAQNGFEEEAIQIFTKMVALGMEVDA 267
Query: 246 ITYLNLLSA 254
N++SA
Sbjct: 268 ----NMVSA 272
>IMGA|Medtr5g032920.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 13389621-13387591 H
EGN_Mt090430 20090702
Length = 676
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 114/366 (31%), Positives = 197/366 (53%), Gaps = 10/366 (2%)
Query: 60 DIPNARKVFDGIPVKN-----LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLI 114
D+ N K+ G+ VK+ + S S+L Y+KC + + +VF+ + ++W+ I
Sbjct: 218 DLVNG-KLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFI 276
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
G V+ G + AL++F EM PN T S+L AC+ L L+ G +H + +
Sbjct: 277 VGLVQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVD 336
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ +L+ +Y KCG +++A VF S + DV N+MI +A +G E+L+LF
Sbjct: 337 GNKYVDAALIHLYGKCGNVEKARSVFES--LTELDVVSINTMIYAYAQNGFGHEALELFE 394
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARA 293
M +G KP+ +T++++L AC + GLV+E F + N + +HY CM+D++ RA
Sbjct: 395 RMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRA 454
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
+ EA L + P LLN C HG++++AE +K+++ P G ++ L+
Sbjct: 455 KRFEEA-AMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLT 513
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
N+YA +WD M+ A + +KK+P S+V++ +H F+A D SHP + +I ML
Sbjct: 514 NIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLH 573
Query: 414 FIVSQM 419
++ ++
Sbjct: 574 ELIEKV 579
Score = 134 bits (338), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/340 (29%), Positives = 163/340 (47%), Gaps = 37/340 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYE-SDRFVSNSLIHMYSSFR 59
ML GV PD TF + KA + + G HG G+E SD FV+ ++ MY+ F
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKF- 150
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
G + AR VFD + ++DV+ ++ LI GY +
Sbjct: 151 ------------------------------GKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
+G EAL VFE+M S KPNE T+ SVL +C +LG L G+++H V+ + L +
Sbjct: 181 RGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVVAS 240
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+TSL+ MY+KC +++++ VF S L S V W S I G +G + +L +F EM
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNS-LAYASHV-TWTSFIVGLVQNGREEIALSMFREMIRC 298
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ P+ T+ ++L AC+ +++ K G+ A ++ + + G V +A
Sbjct: 299 SISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNVEKA 358
Query: 300 ---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGR 336
++ L ++ + +M+ A H L+L E + +
Sbjct: 359 RSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKK 398
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 137/260 (52%), Gaps = 6/260 (2%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++DGY KC I+ AR++FD MP + +++W+ +I +V +G EA+ +++ M G P+
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPD 100
Query: 142 EVTMVSVLCACAHLGALDKGRMMH--HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
T ++ A + +G +G+ H V+ E+ V T +VDMYAK G +++A V
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDARFV 159
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F L K DV ++ ++I G+ GL E+L++F +M +KP+E T ++L +C + G
Sbjct: 160 FDRVLDK--DVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLG 217
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALL 319
+ + K+G+ ++ + ++ V ++ + + + + +
Sbjct: 218 DLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWT-SFI 276
Query: 320 NGCMNHGKLDLAETVGRKLI 339
G + +G+ ++A ++ R++I
Sbjct: 277 VGLVQNGREEIALSMFREMI 296
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 64/237 (27%), Positives = 108/237 (45%), Gaps = 34/237 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R + P+H TF + A + L E G IH K G + +++V +LIH+Y +
Sbjct: 295 MIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGN 354
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR VF+ + ++VS N+M+ YA+
Sbjct: 355 VEKARSVFESLTELDVVSINTMIYAYAQ-------------------------------N 383
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVL 179
G EAL +FE M+ G KPN VT +S+L AC + G +++G + + +N + LT
Sbjct: 384 GFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDH 443
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
T ++D+ + +EA + G K DV W +++ HG V+ + +M
Sbjct: 444 YTCMIDLLGRAKRFEEAAMLIEEG--KNPDVIQWRTLLNACKIHGEVEMAEKFMKKM 498
>IMGA|AC174330_9.1 Pentatricopeptide repeat AC174330.20 67096-65067
H EGN_Mt090430 20090702
Length = 659
Score = 196 bits (497), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 198/366 (54%), Gaps = 10/366 (2%)
Query: 60 DIPNARKVFDGIPVKN-----LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLI 114
D+ N K+ G+ VK + S S+L Y+KC + + +VF+ + ++W+ I
Sbjct: 218 DLVNG-KLIHGLVVKYGLESVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFI 276
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
G V+ G + AL++F EM PN T+ S+L AC+ L L+ G +H + +
Sbjct: 277 VGLVQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVD 336
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ +L+ +Y KCG +++A VF S + D+ N+MI +A +G E+L+LF
Sbjct: 337 GNKFVDAALIHLYGKCGNVEKARSVFDS--LTELDIVSINTMIYAYAQNGFGHEALELFE 394
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARA 293
+ +G++P+ +T++++L AC + GLV+E F + N + +HY CM+D++ RA
Sbjct: 395 RLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRA 454
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
+ EA L + P LLN C HG++++AE +K+++ P G ++ L+
Sbjct: 455 KRFEEA-TMLIEEGKNPDVIQWRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLT 513
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLG 413
N+YA +WD M+ A + +KK+P S+V++ +H F+A D SHP + +I ML
Sbjct: 514 NIYASAGKWDNVIEMKSAGRDLRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLH 573
Query: 414 FIVSQM 419
++ ++
Sbjct: 574 ELIEKV 579
Score = 132 bits (333), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/348 (29%), Positives = 164/348 (47%), Gaps = 39/348 (11%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYE-SDRFVSNSLIHMYSSFR 59
ML GV PD TF + KA + + G HG G+E SD FV+ ++ MY+ F
Sbjct: 92 MLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKF- 150
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
G + AR VFD + ++DV+ ++ LI GY +
Sbjct: 151 ------------------------------GKMKDARFVFDRVLDKDVVLFTALIVGYNQ 180
Query: 120 KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G EAL VFE+M S KPNE T+ SVL +C +LG L G+++H V+ L +
Sbjct: 181 HGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESVVAS 240
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+TSL+ MY+KC +++++ VF S L S V W S I G +G + +L +F EM
Sbjct: 241 QTSLLTMYSKCNMVEDSIKVFNS-LAYASHV-TWTSFIVGLVQNGREEVALSMFREMMRC 298
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ P+ T ++L AC+ +++ K G+ A ++ + + G V +A
Sbjct: 299 SISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNVEKA 358
Query: 300 ---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH 344
+ L ++ I +M+ A H L+L E + K + LEP+
Sbjct: 359 RSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERL--KKLGLEPN 404
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 104/180 (57%), Gaps = 5/180 (2%)
Query: 82 MLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
++DGY KC I+ AR++FD MP + +++W+ +I +V +G EA+ ++ M G P+
Sbjct: 41 LIDGYIKCSVITEARKLFDEMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPD 100
Query: 142 EVTMVSVLCACAHLGALDKGRMMH--HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
T ++ A + +G +G+ H V+ E+ V T +VDMYAK G +++A V
Sbjct: 101 AYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFV-ATGIVDMYAKFGKMKDARFV 159
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F L K DV ++ ++I G+ HGL E+L++F +M +KP+E T ++L +C + G
Sbjct: 160 FDRVLDK--DVVLFTALIVGYNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLG 217
>IMGA|Medtr3g163150.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 42846121-42843357 E
EGN_Mt090430 20090702
Length = 525
Score = 193 bits (490), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 202/383 (52%), Gaps = 44/383 (11%)
Query: 19 ASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVS 78
AS+ G IH ++ K+G+ S FV ++LI YS ++ +A
Sbjct: 172 ASSKFKDVNFGKQIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDAA------------- 218
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
VFD +P+++ + + L+ GY G + +A + +M +
Sbjct: 219 ------------------LVFDEIPDRNTVCANALLSGYCEFGLWVKAFELIRKMPLLKL 260
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN--ELPLTLVLRTSLVDMYAKCGAIQEA 196
K + T+ + L AC L +++ GR +H Y++ ++ + L+++L++MY KCG +++A
Sbjct: 261 KYDHFTLSAALRACTGLSSVEMGRQLHSYLLRTMADIESDVFLQSTLIEMYGKCGMVEKA 320
Query: 197 LHVFRSGLM-----KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
VF+ M + DV W SM+G + +G KE +DL+SEM G+KPD I++L +
Sbjct: 321 QLVFKLDGMDIRKERSRDVVFWTSMLGVYGKNGHYKEVIDLYSEMLREGIKPDGISFLTI 380
Query: 252 LSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
+SAC H G V +F+ + + + P EHY+C+VD++ RAG++ +A++ L +
Sbjct: 381 ISACGHTGQVDAGVKYFESMTNDFKLDPGPEHYSCLVDLLCRAGELNKAWELLNETCHHK 440
Query: 311 -----TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+ SM GALL+ C++ G ++L + ++ +EL+P G V LSNVYA WD+
Sbjct: 441 GIGNCSVSMWGALLSACVDSGNIELGKLAAQRALELDPQNAGICVMLSNVYARLGMWDEI 500
Query: 366 RSMREAMERMGVKKSPGYSFVEM 388
+R + + G++K G S+V++
Sbjct: 501 GRLRVLINQRGLRKDVGCSWVQV 523
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 86/191 (45%), Gaps = 27/191 (14%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYI--TKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
DH T +A L E+G +H Y+ T A ESD F+ ++LI MY + A+
Sbjct: 263 DHFTLSAALRACTGLSSVEMGRQLHSYLLRTMADIESDVFLQSTLIEMYGKCGMVEKAQL 322
Query: 67 VFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEA 126
VF LDG DI R +DV+ W+ ++ Y + G Y E
Sbjct: 323 VFK-------------LDGM----DIRKERS-------RDVVFWTSMLGVYGKNGHYKEV 358
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVD 185
+ ++ EM G KP+ ++ ++++ AC H G +D G + D +L + LVD
Sbjct: 359 IDLYSEMLREGIKPDGISFLTIISACGHTGQVDAGVKYFESMTNDFKLDPGPEHYSCLVD 418
Query: 186 MYAKCGAIQEA 196
+ + G + +A
Sbjct: 419 LLCRAGELNKA 429
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 76/164 (46%), Gaps = 2/164 (1%)
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC 152
++ F M + L ++ +I + RKG AL F M + + + S L A
Sbjct: 114 TLTNSFFKCMNSTNPLHFNVIISHFCRKGFPFLALTTFSFMHTNHVPLDTYALCSTLTAS 173
Query: 153 AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI 212
+ ++ G+ +H +V + ++ + ++L+D Y+K +++A VF + +
Sbjct: 174 SKFKDVNFGKQIHAHVEKSGWSSSVFVGSALIDFYSKLLNVKDAALVFDE--IPDRNTVC 231
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
N+++ G+ GL ++ +L +M ++ +K D T L AC
Sbjct: 232 ANALLSGYCEFGLWVKAFELIRKMPLLKLKYDHFTLSAALRACT 275
>IMGA|Medtr5g024020.1 pentatricopeptide, related
chr05_pseudomolecule_IMGAG_V3 9516659-9518722 H
EGN_Mt090430 20090702
Length = 687
Score = 192 bits (488), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 116/359 (32%), Positives = 186/359 (51%), Gaps = 37/359 (10%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAK 88
G IH I K+ V N+L+HMYS + I +A K F I K+ SW+S++
Sbjct: 364 GRQIHSLIVKSSLCRHTLVGNALVHMYSECKQIDDAFKAFVDIVRKDDSSWSSII---GT 420
Query: 89 CGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
C M + +L E ++D + Y L +
Sbjct: 421 CKQNRMESKALELCKE--------MLDEGINFTSYSLPLCI------------------- 453
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS 208
AC+ L + +G+ +H + I + + + +S++DMYAKCG I+E+ VF L KP+
Sbjct: 454 -SACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEESEKVFDEQL-KPN 511
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
+V +N++I G+A HG ++++++ S++ GV P+ +T+L L+SAC+H G V+E + F
Sbjct: 512 EV-TFNAIISGYAHHGKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLF 570
Query: 269 DC-LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGK 327
L K + PKSEHY+C+VD RAG++ EAYQ + + S LL+ C NH
Sbjct: 571 TLMLDKYKIKPKSEHYSCLVDAYGRAGRLEEAYQI---VQKDGSESAWRTLLSACRNHSN 627
Query: 328 LDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
+ E K+IEL P Y+ LSN+Y W++A + R+ M ++ VKK PG S++
Sbjct: 628 RKIGEKSAMKMIELNPSDHAPYILLSNIYIEEGNWEEALNCRKKMAKIRVKKDPGNSWL 686
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 36/300 (12%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ TF L +A +GL IHG + + G E ++F +SL++MY D
Sbjct: 39 PNENTFAVLLRACTNRELWSVGLQIHGLLVRCGLEREKFAGSSLVYMYLKGGD------- 91
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
D+ A +VF + E+DV++W+ +I G+ + GD+
Sbjct: 92 -----------------------DLRDALRVFYGLLERDVVAWNVMISGFAQNGDFRMVQ 128
Query: 128 AVFEEM-RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
+F EM G KP+ +T S+L C+ L++ +H V + +V+ +++VD+
Sbjct: 129 RLFSEMWEEQGLKPDRITFASLLKCCS---VLNEVMQIHGIVYKFGAEVDVVVESAMVDL 185
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
YAKC + +F S M+ D F+W+SMI G+ + +E+++ F +M VK D+
Sbjct: 186 YAKCRDVSSCRKIFDS--MEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCRQRVKLDQH 243
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+ L AC + + KNG + ++++ A G++ + + +I
Sbjct: 244 VLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASFGELGDVEKLFSRI 303
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 10/248 (4%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP ++V++W+ LI +++ G +A +F MRVS +PNE T +L AC + G
Sbjct: 1 MPNRNVVTWTTLISSHLKYGSVSKAFEMFNHMRVSDERPNENTFAVLLRACTNRELWSVG 60
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCG-AIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
+H ++ L +SLV MY K G +++AL VF GL++ DV WN MI GF
Sbjct: 61 LQIHGLLVRCGLEREKFAGSSLVYMYLKGGDDLRDALRVFY-GLLE-RDVVAWNVMISGF 118
Query: 221 ACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
A +G + LFSEM G+KPD IT+ +LL C+ ++ E + K G
Sbjct: 119 AQNGDFRMVQRLFSEMWEEQGLKPDRITFASLLKCCS---VLNEVMQIHGIVYKFGAEVD 175
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQPT---ASMLGALLNGCMNHGKLDLAETVGR 336
+ MVD+ A+ V+ + + + +SM+ ++ + + R
Sbjct: 176 VVVESAMVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGEEAVNFFKDMCR 235
Query: 337 KLIELEPH 344
+ ++L+ H
Sbjct: 236 QRVKLDQH 243
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 151/340 (44%), Gaps = 36/340 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R V D KA + G+ +HG + K G+++D FV++ L+++Y+SF
Sbjct: 233 MCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLLNLYASF-- 290
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
G++ ++F + ++D+++W+ +I R
Sbjct: 291 -----------------------------GELGDVEKLFSRIDDKDIVAWNSMILAQARP 321
Query: 121 GD-YDEALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
G + +F+E+R + + T+V+VL +C L GR +H ++ + L +
Sbjct: 322 GQGCGRCMQLFQELRRTTFLQIQGATLVAVLKSCEKDSDLPAGRQIHSLIVKSSLCRHTL 381
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
+ +LV MY++C I +A F + K D W+S+IG + + ++L+L EM
Sbjct: 382 VGNALVHMYSECKQIDDAFKAFVDIVRK--DDSSWSSIIGTCKQNRMESKALELCKEMLD 439
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G+ + +SAC+ + E K+G + + ++D+ A+ G + E
Sbjct: 440 EGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGNIEE 499
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ + + ++P A+++G +HGK A V KL
Sbjct: 500 SEKVFDE-QLKPNEVTFNAIISGYAHHGKAQQAIEVLSKL 538
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 96/213 (45%), Gaps = 36/213 (16%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD +TF L K C + E+ + IHG + K G E D V ++
Sbjct: 139 GLKPDRITFASLLKC--CSVLNEV-MQIHGIVYKFGAEVDVVVESA-------------- 181
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
M+D YAKC D+S R++FD M ++D WS +I GY +
Sbjct: 182 -----------------MVDLYAKCRDVSSCRKIFDSMEKKDNFVWSSMISGYTMNNRGE 224
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EA+ F++M K ++ + S L AC + L+ G +H +I N + + L+
Sbjct: 225 EAVNFFKDMCRQRVKLDQHVLSSTLKACVEIEDLNTGVQVHGLMIKNGHQNDCFVASVLL 284
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
++YA G + + +F + D+ WNSMI
Sbjct: 285 NLYASFGELGDVEKLFSR--IDDKDIVAWNSMI 315
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 108/254 (42%), Gaps = 38/254 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ + P A + LL G +H + K+GY D ++ +S+I MY+ +
Sbjct: 437 MLDEGINFTSYSLPLCISACSQLLTISEGKQLHVFAIKSGYSCDVYIGSSIIDMYAKCGN 496
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I + KVFD N V++N+++ GYA
Sbjct: 497 IEESEKVFDEQLKPNEVTFNAIISGYA-------------------------------HH 525
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVL 179
G +A+ V ++ +G PN VT ++++ AC+H G +++ + ++D ++
Sbjct: 526 GKAQQAIEVLSKLEKNGVAPNHVTFLALMSACSHAGYVEETSHLFTLMLDKYKIKPKSEH 585
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+ LVD Y + G ++EA + + K W +++ AC + S M ++
Sbjct: 586 YSCLVDAYGRAGRLEEAYQI----VQKDGSESAWRTLLS--ACRNHSNRKIGEKSAMKMI 639
Query: 240 GVKPDEITYLNLLS 253
+ P + LLS
Sbjct: 640 ELNPSDHAPYILLS 653
>IMGA|Medtr8g139170.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 33882673-33884482 E
EGN_Mt090430 20090702
Length = 577
Score = 190 bits (483), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 133/405 (32%), Positives = 192/405 (47%), Gaps = 62/405 (15%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V P+ TF L A + L E G IH + GY SD V +SLI MY
Sbjct: 120 VMPNEFTFSTLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMY---------- 169
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
KC + A+ +FD M ++V+SW+ +I Y + G
Sbjct: 170 ---------------------GKCNRVDEAQMIFDFMWVRNVVSWTSMITTYSQNGQGHL 208
Query: 126 ALAVFEEMR-VSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
AL +F E + KPN + S + ACA LG L G++ H VI + V+ ++LV
Sbjct: 209 ALQLFREFNHIRMNKPNHFMLCSAVTACASLGRLGSGKITHGVVIRLGHDASDVVASALV 268
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
DMYAKCG + + VFR ++ PS V + SMI G A +GL SL LF EM I GV+
Sbjct: 269 DMYAKCGCVTYSDKVFRR-IVNPS-VVPYTSMIVGAAKYGLGTLSLRLFQEM-IKGVE-- 323
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
F+ + K G+ P + HY C+VD++ R G++ EAYQ
Sbjct: 324 ----------------------LFNSMNEKYGVMPDARHYTCIVDMLGRVGRIDEAYQLA 361
Query: 304 --CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRR 361
Q+ + A + G LL+ HG++D+A ++IE YV LSN YA+
Sbjct: 362 QSVQVGSEDDALLWGTLLSASRLHGRVDIAIEASNRVIESNQQVAAAYVTLSNTYALAGD 421
Query: 362 WDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSE 406
W+ A ++R M+R GV K PG S++E+ + + F A D S S +
Sbjct: 422 WENAHNLRSEMKRTGVYKEPGSSWIEIKDSTYLFHAGDLSKCSQK 466
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 154/316 (48%), Gaps = 10/316 (3%)
Query: 30 LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDG 85
L+ H +T + ++ N I + +F +P+A + L + N++++
Sbjct: 10 LSRHHKLTLFSFHTNTNAHN--IGKFHTFNHLPSATPTHANVVKSGLSNDTFTTNNLINS 67
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y K I A ++FD M +V+SWS L+ GYVR+G + AL +F +M+ + PNE T
Sbjct: 68 YLKLLKIDHAHKLFDEMSHPNVVSWSLLMAGYVRQGQPNIALCLFHQMQGTLVMPNEFTF 127
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+++ AC+ L L+ GR +H V LV+ +SL+DMY KC + EA +F M
Sbjct: 128 STLINACSILANLETGRRIHALVEVFGYRSDLVVCSSLIDMYGKCNRVDEAQMIF--DFM 185
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEM-HIVGVKPDEITYLNLLSACAHGGLVKEA 264
+V W SMI ++ +G +L LF E HI KP+ + ++ACA G +
Sbjct: 186 WVRNVVSWTSMITTYSQNGQGHLALQLFREFNHIRMNKPNHFMLCSAVTACASLGRLGSG 245
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMN 324
+ + G + +VD+ A+ G V + + +I + P+ +++ G
Sbjct: 246 KITHGVVIRLGHDASDVVASALVDMYAKCGCVTYSDKVFRRI-VNPSVVPYTSMIVGAAK 304
Query: 325 HGKLDLAETVGRKLIE 340
+G L+ + +++I+
Sbjct: 305 YGLGTLSLRLFQEMIK 320
>IMGA|Medtr8g073340.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 14293222-14291259 H
EGN_Mt090430 20090702
Length = 624
Score = 188 bits (478), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 128/417 (30%), Positives = 200/417 (47%), Gaps = 69/417 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLK--RELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M G PD + + S C +K + G ++HG + K G E VSN+LI MY F
Sbjct: 237 MQSFGFEPDD--YSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAMYLGF 294
Query: 59 --RDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDG 116
R + +A ++F + VK D +W+ ++ G
Sbjct: 295 DNRCMEDALRIFFSMDVK-------------------------------DCCTWNSVLAG 323
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
YV+ G ++AL +F ++R + ++ T +V+ C+ L L L
Sbjct: 324 YVQVGRSEDALRLFVQVRSLFVEIDDYTFSAVIRCCSDLATL---------------QLV 368
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+V I++A F + + IWNS+I G+A HG +L+LF M
Sbjct: 369 VV--------------IEDAKKCFET--TSNDNAIIWNSIIFGYAQHGQGNIALELFYLM 412
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQ 295
VKPD IT++ +L+AC+H GLV+E + + G+ + EHYAC VD+ RAG
Sbjct: 413 REKKVKPDHITFVAVLTACSHNGLVEEGRKIIQSMESDFGIPLRMEHYACAVDLYGRAGY 472
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV 355
+ E + +P +P A +L LL C + G ++LA V + L+ LEP YV LS++
Sbjct: 473 LEEGKALVETMPFEPDAMVLRTLLGACRSCGNIELASHVAKMLLVLEPEDHSTYVLLSDL 532
Query: 356 YAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
Y + WD+ S+ M GVKK PG+S++E+ +H F A D SHP S++IY +L
Sbjct: 533 YGRLKMWDEKASVTRLMRERGVKKVPGWSWIEVKNKVHAFNAEDHSHPQSKEIYELL 589
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 96/184 (52%), Gaps = 1/184 (0%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
+N+ S +++LD YAKCG + A VF MPE + +SW+ LI GY R GD D A +
Sbjct: 74 ENVFSGSALLDMYAKCGRVDDALVVFRYMPECNYVSWNTLIAGYSRVGDLDMAFWLMRCQ 133
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
+ G ++ T+ +L + +H ++ + L ++ +++ Y++C ++
Sbjct: 134 ELEGVGIDDGTVSPLLTLLDGVRFYSLVMQLHCKIVKHGLEAFNIVCNAIITAYSECCSL 193
Query: 194 QEALHVFRSGL-MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
Q+A VF + + D+ WNSM+ + H + D+F EM G +PD+ +Y ++
Sbjct: 194 QDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLAFDVFIEMQSFGFEPDDYSYTGVI 253
Query: 253 SACA 256
S C+
Sbjct: 254 SGCS 257
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 78/152 (51%), Gaps = 2/152 (1%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
MP++D +SW+ +I GYV D D + MRVSG + T S L A L+ G
Sbjct: 1 MPQRDTVSWNAVISGYVNTADLDSTWQLLNAMRVSGHAFDNHTFGSTLKGVARAQRLELG 60
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFA 221
+ +H +I L + ++L+DMYAKCG + +AL VFR M + WN++I G++
Sbjct: 61 QQLHSVMIKMRLNENVFSGSALLDMYAKCGRVDDALVVFR--YMPECNYVSWNTLIAGYS 118
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
G + + L + GV D+ T LL+
Sbjct: 119 RVGDLDMAFWLMRCQELEGVGIDDGTVSPLLT 150
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 136/285 (47%), Gaps = 25/285 (8%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFD---LMPEQDVLSWSCLIDGYVRKGDYDEA 126
G+ N+V N+++ Y++C + A +VF + +D+++W+ ++ Y+ + A
Sbjct: 172 GLEAFNIVC-NAIITAYSECCSLQDAERVFVGAVTVTCRDLVTWNSMLAAYLLHKKENLA 230
Query: 127 LAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
VF EM+ G +P++ + V+ C+ +G +H VI +++ + +L+ M
Sbjct: 231 FDVFIEMQSFGFEPDDYSYTGVISGCSIKEHKSRGESLHGLVIKRGAEVSVPVSNALIAM 290
Query: 187 Y----AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
Y +C +++AL +F S M D WNS++ G+ G +++L LF ++ + V+
Sbjct: 291 YLGFDNRC--MEDALRIFFS--MDVKDCCTWNSVLAGYVQVGRSEDALRLFVQVRSLFVE 346
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM----ARAGQ--- 295
D+ T+ ++ C+ ++ D K S A + + + A+ GQ
Sbjct: 347 IDDYTFSAVIRCCSDLATLQLVVVIED--AKKCFETTSNDNAIIWNSIIFGYAQHGQGNI 404
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
E + + + ++P A+L C ++G ++ GRK+I+
Sbjct: 405 ALELFYLMREKKVKPDHITFVAVLTACSHNGLVE----EGRKIIQ 445
>IMGA|Medtr3g114590.1 Ribosomal protein L11; Sugar transporter
superfamily chr03_pseudomolecule_IMGAG_V3
29061067-29059406 H EGN_Mt090430 20090702
Length = 553
Score = 184 bits (468), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 123/388 (31%), Positives = 196/388 (50%), Gaps = 35/388 (9%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G PD T L A +G +HG K+G +SD V + L+ MYS +
Sbjct: 196 MRLAGKKPDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKC 255
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +A +VF CG +F+ D+++WS LI GY +
Sbjct: 256 IDSAYRVF--------------------CG-------IFN----PDLVTWSALISGYSQC 284
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G+Y +AL F ++ + K + V + +VL + + + G +H YV+ + L + +
Sbjct: 285 GEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMANVLPGCEIHGYVLRHGLESDVKVS 344
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+DMY+KCG + VFR +M ++ +NSMI + HG ++ +F EM G
Sbjct: 345 SALIDMYSKCGFLHLGTCVFR--IMLERNIISYNSMILAYGLHGCASQAFTMFDEMLQKG 402
Query: 241 VKPDEITYLNLLSACAHGGLVKEAW-YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ PDE T+ LLSAC H GLVK+ F+ + + + EHY MV ++ G++ EA
Sbjct: 403 LVPDEGTFSALLSACCHAGLVKDGRELFWRMKDEFNIKARPEHYVYMVKLLGGVGELEEA 462
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
Y +P ++LGALL+ C ++G +LAETV +++ + P + V LSN+YA
Sbjct: 463 YNLTQSLPKPVDKAILGALLSCCDSYGNSELAETVAQQIFKSNPADNVYRVMLSNIYAGD 522
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVE 387
RWD + +R+ M G KK G S++E
Sbjct: 523 GRWDDVKKLRDKMVG-GQKKMRGVSWIE 549
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/253 (27%), Positives = 114/253 (45%), Gaps = 3/253 (1%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YA I+ A VFD + V W+ +I + + + A+++F M V +P+ T
Sbjct: 48 YAFNNHINYAHHVFDKTSTRSVFLWNSMIRAFAKARRFSNAISLFRTMLVDDIRPDNYTY 107
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
+ ACA R++H + L L + ++LV Y+K G + EA VF G++
Sbjct: 108 ACAIRACADSFDFGMLRVVHGSAVSVGLGLDPICCSALVSAYSKLGVVHEARRVF-DGIV 166
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+P D+ +WNS+I + G+ + + +FS M + G KPD T LL A L+
Sbjct: 167 EP-DLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKKPDGFTLAGLLGGIADSSLLSIGQ 225
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNH 325
K+G+ + +V + +R + AY+ C I P AL++G
Sbjct: 226 ELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRVFCGI-FNPDLVTWSALISGYSQC 284
Query: 326 GKLDLAETVGRKL 338
G+ A RKL
Sbjct: 285 GEYQKALLFFRKL 297
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 130/267 (48%), Gaps = 6/267 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
++++ Y+K G + AR+VFD + E D++ W+ LI Y G ++ + +F MR++G K
Sbjct: 143 SALVSAYSKLGVVHEARRVFDGIVEPDLVLWNSLISAYGGSGMWEIGIQMFSSMRLAGKK 202
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
P+ T+ +L A L G+ +H + L + + LV MY++C I A V
Sbjct: 203 PDGFTLAGLLGGIADSSLLSIGQELHGLSQKSGLDSDCHVGSLLVSMYSRCKCIDSAYRV 262
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F G+ P D+ W+++I G++ G +++L F ++++ K D + +L++
Sbjct: 263 F-CGIFNP-DLVTWSALISGYSQCGEYQKALLFFRKLNMKSKKLDSVLIATVLASITQMA 320
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV---AEAYQFLCQIPIQPTASMLG 316
V + ++G+ + + ++D+ ++ G + ++ + + I SM+
Sbjct: 321 NVLPGCEIHGYVLRHGLESDVKVSSALIDMYSKCGFLHLGTCVFRIMLERNIISYNSMIL 380
Query: 317 AL-LNGCMNHGKLDLAETVGRKLIELE 342
A L+GC + E + + L+ E
Sbjct: 381 AYGLHGCASQAFTMFDEMLQKGLVPDE 407
>IMGA|Medtr5g008330.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 1547626-1545265 E
EGN_Mt090430 20090702
Length = 774
Score = 183 bits (465), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 122/412 (29%), Positives = 210/412 (50%), Gaps = 21/412 (5%)
Query: 26 RELGLAIHGYITKAGYESDRF--VSNSLIHMYSSFRDIPNARKV-----FDGIPVKN-LV 77
+ +GL H Y + S V +SL H S+ DI N + + VK+ L+
Sbjct: 272 KAIGLFAHMYCNGIRFNSTTLLGVLSSLNHCMSTSDDINNTHHLKNCFQLHCLTVKSGLI 331
Query: 78 S----WNSMLDGYAKCG-DISMARQVF-DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
S +++ YA G IS ++F D E D++SW+ +I + + D ++A +F
Sbjct: 332 SEVEVVTALVKSYADLGGHISDCFKLFLDTSGEHDIVSWTAIISVFAER-DPEQAFLLFC 390
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
++ + T L ACA+ +H V+ V+ +L+ Y + G
Sbjct: 391 QLHRENFVLDRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSG 450
Query: 192 AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
++ + VF M D+ WNSM+ +A HG K++LDLF +M V PD T++ L
Sbjct: 451 SLALSEQVFTE--MGCHDLVSWNSMLKSYAIHGRAKDALDLFKQM---DVHPDSATFVAL 505
Query: 252 LSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP 310
L+AC+H GLV+E F+ + ++ G+ P +HY+CMVD+ RAG++ EA + + ++P++P
Sbjct: 506 LAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLYGRAGKIFEAEELIRKMPMKP 565
Query: 311 TASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMRE 370
+ + +LL C HG+ DLA+ K L+P Y+ +SN+Y+ + +A +R+
Sbjct: 566 DSVIWSSLLGSCRKHGEADLAKLAADKFKVLDPKNSLAYIQMSNIYSSGGSFIEAGLIRK 625
Query: 371 AMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHI 422
M V+K PG S+VE+ +H F + + HP + I L ++ Q+K +
Sbjct: 626 EMRDSKVRKRPGLSWVEVGKQVHEFTSGGQHHPKRQAILSRLETLIGQLKEM 677
Score = 108 bits (270), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 101/187 (54%), Gaps = 13/187 (6%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N++L+ Y KCG + AR +FD MP ++ +SW+ L+ GY + G E A+F M ++ +
Sbjct: 119 NNLLNMYCKCGHLDYARYLFDQMPRRNFVSWTVLVSGYAQFGLIRECFALFSGM-LACFR 177
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG-------- 191
PNE SVLCAC + G +H + L ++ + +L+ MY+KC
Sbjct: 178 PNEFAFASVLCACEEQD-VKYGLQVHAAALKMSLDFSVYVANALITMYSKCSGGFGGSCD 236
Query: 192 -AIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
+A VF+S M+ ++ WNSMI GF GL +++ LF+ M+ G++ + T L
Sbjct: 237 QTTDDAWMVFKS--MEYRNLISWNSMISGFQFRGLGDKAIGLFAHMYCNGIRFNSTTLLG 294
Query: 251 LLSACAH 257
+LS+ H
Sbjct: 295 VLSSLNH 301
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 115/260 (44%), Gaps = 43/260 (16%)
Query: 9 DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF 68
D TF KA A + + +H + K G+ +D VSN+LIH Y + + +VF
Sbjct: 400 DRHTFSIALKACAYFVTEKNATEVHSQVMKQGFHNDTVVSNALIHAYGRSGSLALSEQVF 459
Query: 69 DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
+ +LVSWNSML YA G A+ DL + DV
Sbjct: 460 TEMGCHDLVSWNSMLKSYAIHGR---AKDALDLFKQMDV--------------------- 495
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE-LPLTLVLRTSLVDMY 187
P+ T V++L AC+H G +++G + + + ++ + L + +VD+Y
Sbjct: 496 ----------HPDSATFVALLAACSHAGLVEEGTQIFNSMTESHGIAPHLDHYSCMVDLY 545
Query: 188 AKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG---LVKESLDLFSEMHIVGVKPD 244
+ G I EA + R MKP D IW+S++G HG L K + D F + +
Sbjct: 546 GRAGKIFEAEELIRKMPMKP-DSVIWSSLLGSCRKHGEADLAKLAADKFKVLD----PKN 600
Query: 245 EITYLNLLSACAHGGLVKEA 264
+ Y+ + + + GG EA
Sbjct: 601 SLAYIQMSNIYSSGGSFIEA 620
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 9/155 (5%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
PE + + I +G+ ++AL++ + P + ACA + +G
Sbjct: 43 PETIARNVNTQIHTLSLQGNLEKALSLV----YTNPSLTLQDYAFLFHACAQKKYIKQGM 98
Query: 163 MMHHYVIDN--ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
+HHY+++ ++ + L +L++MY KCG + A ++F M + W ++ G+
Sbjct: 99 ALHHYILNKHPKIQNDIFLTNNLLNMYCKCGHLDYARYLFDQ--MPRRNFVSWTVLVSGY 156
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A GL++E LFS M + +P+E + ++L AC
Sbjct: 157 AQFGLIRECFALFSGM-LACFRPNEFAFASVLCAC 190
>IMGA|Medtr2g033760.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 9298667-9302572 E
EGN_Mt090430 20090702
Length = 516
Score = 181 bits (460), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 137/455 (30%), Positives = 203/455 (44%), Gaps = 77/455 (16%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIP 62
R+ + D TF L + S LG +H + K G +S +L+ MYS +
Sbjct: 55 RIRIDLDSHTFTPLLRPSP----TSLGKQLHSQMIKTGSDSGTVPKTALLDMYSRHGSLN 110
Query: 63 NARKVFDGIPVKNLVSWNSMLDGYAKCGD------------------------------- 91
++ KVFD + +++V+WN++L + +CG
Sbjct: 111 SSLKVFDEMLHRDVVAWNTLLSCFLRCGKPDEAIRVLREMGRENVEMSEFTLCSVLKCCA 170
Query: 92 ----ISMARQVFDL---MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR---------- 134
+ RQV L M V+ + LID Y G AL VF ++
Sbjct: 171 SLKALEFGRQVHGLVVAMGRDLVVLSTALIDFYSSVGCVHHALNVFYGLKGWKDDMIHNS 230
Query: 135 -VSG----------------PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL 177
VSG KPN V + SVL C+ L G+ +H +
Sbjct: 231 LVSGCIKNGRYREAFKVMSLVKPNAVALTSVLVCCSEESDLLTGKQVHCVAVRQGFTFET 290
Query: 178 VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
L L+DMYAKCG I +A VF K DV W MI G+ +G E+++LF +M
Sbjct: 291 QLCNVLLDMYAKCGKILQAWSVFDGIFQK--DVISWTCMIDGYGRNGCGYEAVELFWKMM 348
Query: 238 IVG--VKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAG 294
G V P+ +T+L++LSAC H GLV+E F+ + K G+ P+ EHYAC +D++ RAG
Sbjct: 349 EDGSEVLPNSVTFLSVLSACGHSGLVEEGKQCFNIMKEKYGIDPEPEHYACFIDILGRAG 408
Query: 295 QVAE---AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG 351
++ E AYQ + PTA + +LLN C + E + L++LEP++ V
Sbjct: 409 KIEEVWSAYQNMIDQGTSPTAGVWISLLNACSLGQDFERGEFAAKSLLQLEPNKASNIVL 468
Query: 352 LSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
SN YA RWD +R M G+ K G S++
Sbjct: 469 ASNFYAAIGRWDCVGELRSMMREKGLVKEAGNSWI 503
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 6/144 (4%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI Y+R+G A +F +R + T +L G+ +H +I
Sbjct: 33 LITSYIRRGHPISAFNLFLSLRRIRIDLDSHTFTPLL----RPSPTSLGKQLHSQMIKTG 88
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
V +T+L+DMY++ G++ +L VF L + DV WN+++ F G E++ +
Sbjct: 89 SDSGTVPKTALLDMYSRHGSLNSSLKVFDEMLHR--DVVAWNTLLSCFLRCGKPDEAIRV 146
Query: 233 FSEMHIVGVKPDEITYLNLLSACA 256
EM V+ E T ++L CA
Sbjct: 147 LREMGRENVEMSEFTLCSVLKCCA 170
>IMGA|Medtr2g105320.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 25057358-25056408 E
EGN_Mt090430 20090702
Length = 316
Score = 164 bits (415), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 89/279 (31%), Positives = 155/279 (55%), Gaps = 4/279 (1%)
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +AR + GI + + ++ YA C + A +F + ++ LI Y+
Sbjct: 29 IIHARTIRLGISHDDFIR-TKLVSCYASCSKLHQANILFSFTNRKPTFLYNSLIRAYLSL 87
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ E L++F EMR+S + T+ VL +CA L AL G+ +H V+ N L L
Sbjct: 88 NLFKETLSIFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNS 147
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MYAKCG ++ A VF G+ + ++V W++M+ G+ HG +E ++F+ M VG
Sbjct: 148 NALINMYAKCGELEFARKVF-DGMCERNEV-TWSTMMAGYGMHGRFEEVFEMFNRMVEVG 205
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEA 299
+ D +++ +L+AC+HGG V++ F+ + + G+ P HY CMVD++ R G V EA
Sbjct: 206 ERMDNVSFTVVLTACSHGGFVEKGREIFEMMKVRFGVKPDVRHYTCMVDMLGRVGLVEEA 265
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ ++ ++P +++GAL C HG++D+AE V +
Sbjct: 266 EKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAERF 304
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
T P + K+ A L LG +HG + G+ D SN+LI+MY+ ++ ARKVFDG+
Sbjct: 111 TLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGM 170
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
+N V+W++M+ GY G ++E +F
Sbjct: 171 CERNEVTWSTMMAGYGM-------------------------------HGRFEEVFEMFN 199
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSLVDMYAK 189
M G + + V+ VL AC+H G ++KGR + ++ + +R T +VDM +
Sbjct: 200 RMVEVGERMDNVSFTVVLTACSHGGFVEKGREIFE-MMKVRFGVKPDVRHYTCMVDMLGR 258
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
G ++EA + ++P + + ++ G HG V
Sbjct: 259 VGLVEEAEKLTLKMDVRPDEALV-GALFGACKTHGRV 294
>IMGA|Medtr2g105220.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 25023604-25022654 E
EGN_Mt090430 20090702
Length = 316
Score = 163 bits (413), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/279 (32%), Positives = 154/279 (55%), Gaps = 4/279 (1%)
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +AR + GI + + ++ YA C + A +F + ++ LI Y+
Sbjct: 29 IIHARTIRLGISHDDFIR-TKLVSCYASCSKLHQANILFSFTNRKPTFLYNSLIRAYLSL 87
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
+ E L++F EMR+S + T+ VL +CA L AL G+ +H V+ N L L
Sbjct: 88 NLFKETLSLFREMRLSYKPFDCHTLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNS 147
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+L++MYAKCG ++ A VF G+ + ++V W++M+ F HG +E ++F+ M VG
Sbjct: 148 NALINMYAKCGELEFARKVF-DGMCERNEV-TWSTMMADFGMHGRFEEVFEMFNRMVEVG 205
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLG-KNGMTPKSEHYACMVDVMARAGQVAEA 299
+ D +++ +L+AC+HGG V++ F+ + + G+ P HY CMVD++ R G V EA
Sbjct: 206 ERMDSVSFTVVLTACSHGGFVEKGREIFEIMKVRFGVKPDVRHYTCMVDMLGRVGLVEEA 265
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ ++ ++P +++GAL C HG++D+AE V K
Sbjct: 266 EKLTLKMDVRPDEALVGALFGACKTHGRVDVAERVAEKF 304
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 99/217 (45%), Gaps = 35/217 (16%)
Query: 12 TFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI 71
T P + K+ A L LG +HG + G+ D SN+LI+MY+ ++ ARKVFDG+
Sbjct: 111 TLPLVLKSCAGLSALRLGKQVHGAVLVNGFALDLKNSNALINMYAKCGELEFARKVFDGM 170
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
+N V+W++M+ D M G ++E +F
Sbjct: 171 CERNEVTWSTMM------ADFGM-------------------------HGRFEEVFEMFN 199
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR--TSLVDMYAK 189
M G + + V+ VL AC+H G ++KGR + ++ + +R T +VDM +
Sbjct: 200 RMVEVGERMDSVSFTVVLTACSHGGFVEKGREIFE-IMKVRFGVKPDVRHYTCMVDMLGR 258
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
G ++EA + ++P + + ++ G HG V
Sbjct: 259 VGLVEEAEKLTLKMDVRPDEALV-GALFGACKTHGRV 294
>IMGA|Medtr6g069840.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 13028528-13031057 H
EGN_Mt090430 20090702
Length = 342
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/210 (39%), Positives = 132/210 (62%), Gaps = 7/210 (3%)
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHI 238
L SL+DMYAKCG I A VF +K V+ WN+MIGGFA HG +E++ LF +M +
Sbjct: 5 LLASLIDMYAKCGEIDSASSVFHEHKVK-RKVWPWNAMIGGFAMHGKPEEAISLFEQMKV 63
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVA 297
V P+++T++ LL+AC+HG ++KE +F+ + + G+ P+ EHY CMVD+++R+ +
Sbjct: 64 ERVSPNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHYGCMVDLLSRSELLK 123
Query: 298 EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYA 357
EA + + +P+ P ++ GALLN C + ++ +GR + E++P+ G V L N+Y+
Sbjct: 124 EAEEMILSMPMAPDVAIWGALLNACRIYKDMERGYRIGRIIKEIDPNHIGCNVLLGNIYS 183
Query: 358 IFRRWDKARSMREAMERMGVKKSPGYSFVE 387
RW++AR +RE E + YSF+E
Sbjct: 184 TSGRWNEARILRERNEIREI-----YSFLE 208
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 81/145 (55%), Gaps = 11/145 (7%)
Query: 81 SMLDGYAKCGDISMARQVF-DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
S++D YAKCG+I A VF + ++ V W+ +I G+ G +EA+++FE+M+V
Sbjct: 8 SLIDMYAKCGEIDSASSVFHEHKVKRKVWPWNAMIGGFAMHGKPEEAISLFEQMKVERVS 67
Query: 140 PNEVTMVSVLCACAHLGALDKGR-----MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
PN+VT +++L AC+H + +G+ M Y I+ E+ +VD+ ++ ++
Sbjct: 68 PNKVTFIALLNACSHGYMIKEGKSYFELMSSDYGINPEIEHY----GCMVDLLSRSELLK 123
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGG 219
EA + S M P DV IW +++
Sbjct: 124 EAEEMILSMPMAP-DVAIWGALLNA 147
>IMGA|Medtr2g096680.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 22425187-22423852 E
EGN_Mt090430 20090702
Length = 303
Score = 161 bits (407), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 130/211 (61%), Gaps = 3/211 (1%)
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MYAKCG + + +VF ++ DV W +MI A HG KE+L LF +M + VKPD
Sbjct: 1 MYAKCGDLSFSRNVF--DMIAIKDVVAWTTMINANAMHGNGKEALFLFEKMLLSMVKPDS 58
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT-PKSEHYACMVDVMARAGQVAEAYQFLC 304
+T++ +LS+C+H LV+E F+ + K+ + P + HY+C+VD+ +RAG++ EAY+F+
Sbjct: 59 VTFICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYSRAGRLNEAYEFIQ 118
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDK 364
++P+ PTA +LL GC + ++LA+ +KL E+EP + YV L N+ + W +
Sbjct: 119 RMPMGPTAGAWKSLLAGCRVYKNVELAKISAKKLFEIEPSRSRDYVALCNILVTAKLWSE 178
Query: 365 ARSMREAMERMGVKKSPGYSFVEMHGALHRF 395
A +R M+ G+ K+PG S++ + +H F
Sbjct: 179 ASKIRMFMKESGITKTPGCSWLHVGNRVHNF 209
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 81/135 (60%), Gaps = 2/135 (1%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
YAKCGD+S +R VFD++ +DV++W+ +I+ G+ EAL +FE+M +S KP+ VT
Sbjct: 2 YAKCGDLSFSRNVFDMIAIKDVVAWTTMINANAMHGNGKEALFLFEKMLLSMVKPDSVTF 61
Query: 146 VSVLCACAHLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL 204
+ VL +C+H +++G ++ + D+ + + + +VD+Y++ G + EA +
Sbjct: 62 ICVLSSCSHSRLVEEGVQIFNSMSKDHLVEPNAIHYSCVVDIYSRAGRLNEAYEFIQRMP 121
Query: 205 MKPSDVFIWNSMIGG 219
M P+ W S++ G
Sbjct: 122 MGPT-AGAWKSLLAG 135
>IMGA|Medtr4g155300.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 38311948-38309970 E
EGN_Mt090430 20090702
Length = 537
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 120/201 (59%), Gaps = 2/201 (0%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N +I Y ++ + AR++F+ +P +N+ SWN+++ GY + GDI+ AR++FD+M ++D +
Sbjct: 284 NVMIAGYVQYKKMDMARELFEAMPCRNVGSWNTIISGYGQNGDIAQARELFDMMTQRDCV 343
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
SW+ +I GY + G Y++ + + +M+ G N T L CA + AL G+ +H
Sbjct: 344 SWAAIIAGYAQTGHYEKVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQA 403
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKE 228
+ ++ +L++MY KCG+I EA VF M+ D+ WN+M+ G+A HG ++
Sbjct: 404 VKTGYDNGCLVGNALLEMYCKCGSIGEAYDVFER--MQLKDIISWNTMLAGYARHGFGRQ 461
Query: 229 SLDLFSEMHIVGVKPDEITYL 249
+L +F M G KPDEIT L
Sbjct: 462 ALLVFDSMKTAGFKPDEITML 482
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 150/315 (47%), Gaps = 26/315 (8%)
Query: 64 ARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDY 123
A +VFD +P KNL SWN ML GY K + AR +FDLMP++D +SW+ ++ GYVR G
Sbjct: 82 ALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCV 141
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
DEA VF+ M P + ++ +L G L++ R + +D E L+ L
Sbjct: 142 DEAKLVFDNM----PYKDSISWNGLLAVYVQNGRLEEARRLFESKVDWE----LISWNCL 193
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ Y K + +A +F M + WN+MI G+A G + ++ LF E +
Sbjct: 194 MGGYVKRKMLGDARRLFDH--MPVRNAISWNTMISGYARDGDLLQARRLFEESPV----R 247
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
D T+ ++ A G++ EA FD + GK M Y M+ + ++ A +
Sbjct: 248 DVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMA-----YNVMIAGYVQYKKMDMAREL 302
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRR 361
+P + S +++G +G D+A+ R+L ++ +D + + YA
Sbjct: 303 FEAMPCRNVGS-WNTIISGYGQNG--DIAQ--ARELFDMMTQRDCVSWAAIIAGYAQTGH 357
Query: 362 WDKARSMREAMERMG 376
++K M M+R G
Sbjct: 358 YEKVMHMLVKMKRDG 372
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 135/290 (46%), Gaps = 35/290 (12%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL 108
N L+ Y + + +AR++FD +PV+N +SWN+M+ GYA+ GD+ AR++F+ P +DV
Sbjct: 191 NCLMGGYVKRKMLGDARRLFDHMPVRNAISWNTMISGYARDGDLLQARRLFEESPVRDVF 250
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+W+ ++ YV+ G DEA VF+EM P E+ ++ +D R +
Sbjct: 251 TWTAMVFAYVQSGMLDEARRVFDEM----PGKREMAYNVMIAGYVQYKKMDMARELFE-- 304
Query: 169 IDNELPLTLV-LRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+P V +++ Y + G I +A +F +M D W ++I G+A G +
Sbjct: 305 ---AMPCRNVGSWNTIISGYGQNGDIAQARELF--DMMTQRDCVSWAAIIAGYAQTGHYE 359
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGM 276
+ + + +M G + T+ LS CA HG VK Y CL N
Sbjct: 360 KVMHMLVKMKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTG-YDNGCLVGNA- 417
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
++++ + G + EAY ++ ++ S +L G HG
Sbjct: 418 ---------LLEMYCKCGSIGEAYDVFERMQLKDIIS-WNTMLAGYARHG 457
Score = 91.7 bits (226), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 98/191 (51%), Gaps = 10/191 (5%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
F N ++ Y R + +AR +FD +P K+ VSWN ML GY + G + A+ VFD MP +
Sbjct: 95 FSWNLMLTGYVKNRRLVDARNLFDLMPQKDAVSWNVMLSGYVRSGCVDEAKLVFDNMPYK 154
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
D +SW+ L+ YV+ G +EA +FE +V + ++ LG D R+
Sbjct: 155 DSISWNGLLAVYVQNGRLEEARRLFES-KVDWELISWNCLMGGYVKRKMLG--DARRLFD 211
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGL 225
H + N + +++ YA+ G + +A +F ++ DVF W +M+ + G+
Sbjct: 212 HMPVRNAISW-----NTMISGYARDGDLLQARRLFEESPVR--DVFTWTAMVFAYVQSGM 264
Query: 226 VKESLDLFSEM 236
+ E+ +F EM
Sbjct: 265 LDEARRVFDEM 275
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 128/270 (47%), Gaps = 27/270 (10%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
+V + + + + G +A +VFD MP +++ SW+ ++ GYV+ +A +F+ M
Sbjct: 63 IVKCTNSISTHMRNGHCHLALRVFDSMPYKNLFSWNLMLTGYVKNRRLVDARNLFDLM-- 120
Query: 136 SGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
P+ + V+ +L G +D+ ++ V DN + L+ +Y + G ++E
Sbjct: 121 --PQKDAVSWNVMLSGYVRSGCVDEAKL----VFDNMPYKDSISWNGLLAVYVQNGRLEE 174
Query: 196 ALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
A +F S + ++ WN ++GG+ ++ ++ LF M + + I++ ++S
Sbjct: 175 ARRLFESKV--DWELISWNCLMGGYVKRKMLGDARRLFDHMPV----RNAISWNTMISGY 228
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSE--HYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
A G + +A F+ +P + + MV ++G + EA + ++P + +
Sbjct: 229 ARDGDLLQARRLFE------ESPVRDVFTWTAMVFAYVQSGMLDEARRVFDEMPGKREMA 282
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIELEP 343
++ G + + K+D+A R+L E P
Sbjct: 283 -YNVMIAGYVQYKKMDMA----RELFEAMP 307
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 31/146 (21%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G + TF A + LG +HG K GY++ V N+L+ MY
Sbjct: 368 MKRDGKSLNRSTFCCALSTCAGMAALVLGKQVHGQAVKTGYDNGCLVGNALLEMYCKCGS 427
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I A VF+ + +K+++SWN+ML GYA+ G RQ
Sbjct: 428 IGEAYDVFERMQLKDIISWNTMLAGYARHG---FGRQ----------------------- 461
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMV 146
AL VF+ M+ +G KP+E+TM+
Sbjct: 462 -----ALLVFDSMKTAGFKPDEITML 482
>IMGA|Medtr5g033030.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 13436183-13434274 H
EGN_Mt090430 20090702
Length = 492
Score = 151 bits (382), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 98/333 (29%), Positives = 171/333 (51%), Gaps = 19/333 (5%)
Query: 60 DIPNARKVFDGIPVKN-----LVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLI 114
D+ N K+ G+ VK+ + S S+L Y+KC + + +VF+ + ++ + I
Sbjct: 105 DLVNG-KLIHGLVVKSGLESVIASQTSLLTMYSKCSMVEDSIKVFNQLSYASHVTCTSFI 163
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
G V+ G + AL++F EM PN T + L L+ G +H + +L
Sbjct: 164 VGLVQNGREEVALSMFREMIRCSISPNHFTYLV-------LAMLEAGEKIHAVTV--KLG 214
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ +L+ +Y KCG +++A VF S + DV N+MI +A +G E+L+LF
Sbjct: 215 GNKYVDAALIHLYGKCGNVEKARSVFDS--LTELDVVSINTMIYAYAQNGFGHEALELFK 272
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARA 293
+ +G++P+ +T++++L AC + GLV+E F + N + +HY CM+D++ RA
Sbjct: 273 RLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRA 332
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLS 353
+ EA L + P LLN C HG++++AE RK++ P ++ L+
Sbjct: 333 KRFEEA-AMLIEEGENPDVVQWRTLLNACKIHGEVEMAEKFMRKMLNQAPRDGETHILLT 391
Query: 354 NVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
N+YA +WD M+ A + +KKSP S++
Sbjct: 392 NIYASAGKWDNVIEMKSAGRDLRLKKSPAMSWL 424
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/282 (29%), Positives = 137/282 (48%), Gaps = 24/282 (8%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAV 129
G V + ++D Y K G + A+ VFD + ++DV+ ++ LI GY + G EAL V
Sbjct: 18 GFEVSDGFVATGIVDMYTKFGKMKDAQFVFDRVLDKDVVLFTALIVGYNQHGLDGEALEV 77
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
FEEM KPNE T+ SVL +C +LG L G+++H V+ + L + +TSL+ MY+K
Sbjct: 78 FEEMVGRRVKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLESVIASQTSLLTMYSK 137
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
C +++++ VF + + S I G +G + +L +F EM + P+ TYL
Sbjct: 138 CSMVEDSIKVFNQ--LSYASHVTCTSFIVGLVQNGREEVALSMFREMIRCSISPNHFTYL 195
Query: 250 NLLSACA----HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQF 302
L A H VK LG N A ++ + + G V +A +
Sbjct: 196 VLAMLEAGEKIHAVTVK--------LGGNKYVD-----AALIHLYGKCGNVEKARSVFDS 242
Query: 303 LCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPH 344
L ++ + +M+ A H L+L + + K + LEP+
Sbjct: 243 LTELDVVSINTMIYAYAQNGFGHEALELFKRL--KKLGLEPN 282
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 43/237 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+R + P+H T+ LA A G IH K G +++V +LIH+Y +
Sbjct: 182 MIRCSISPNHFTYLVLAMLEA-------GEKIHAVTVKLG--GNKYVDAALIHLYGKCGN 232
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ AR VFD + ++VS N+M+ YA+
Sbjct: 233 VEKARSVFDSLTELDVVSINTMIYAYAQ-------------------------------N 261
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN-ELPLTLVL 179
G EAL +F+ ++ G +PN VT +S+L AC + G +++G + + +N + LT
Sbjct: 262 GFGHEALELFKRLKKLGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDH 321
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
T ++D+ + +EA + G + DV W +++ HG V+ + +M
Sbjct: 322 YTCMIDLLGRAKRFEEAAMLIEEG--ENPDVVQWRTLLNACKIHGEVEMAEKFMRKM 376
>IMGA|Medtr5g105010.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 42146352-42145446 H
EGN_Mt090430 20090702
Length = 287
Score = 150 bits (379), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 138/252 (54%), Gaps = 19/252 (7%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV--KNLVSWNSMLDGYAKCGDISMARQVF 99
+ D+F L+ + AR++FD + K+LV+WN M+ GY K G I +A ++F
Sbjct: 51 KRDKFTWTCLVDGLCKCGKVEVAREIFDRMDDGDKSLVTWNVMIHGYMKSGKIELAAELF 110
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
+ MP++ ++SW+ +IDGY G + EA+ +FE + G P T+ S L A + L L
Sbjct: 111 ETMPKRSLISWNSMIDGYQGNGCFYEAMKLFEALLNEGFVPINATLSSALSAVSGLAVLG 170
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGG 219
GR +H +V+ N + G ++ AL VF+ G+ K + W ++I G
Sbjct: 171 NGRWIHLFVVKNGFEVA--------------GVLESALAVFK-GIAKKK-LAHWTAIIVG 214
Query: 220 FACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD-CLGKNGMTP 278
HGL ++L+L +EM +G+KP IT++ +L+AC+H GLV E F + + + P
Sbjct: 215 LGMHGLADQALELITEMRRIGMKPHAITFIGVLNACSHAGLVDEGNQIFQMMINEYKIEP 274
Query: 279 KSEHYACMVDVM 290
EHY C+VD++
Sbjct: 275 TVEHYGCLVDIL 286
Score = 97.8 bits (242), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 133/313 (42%), Gaps = 62/313 (19%)
Query: 54 MYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCL 113
MYS F D+ AR VFD I K+L+ WN ++DGY + G++ A +V D MP++D +W+CL
Sbjct: 1 MYSKFGDMGLARLVFDKIGDKDLLVWNCLVDGYVRNGEVEFALKVSDEMPKRDKFTWTCL 60
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+DG + G + A +F+ M G K
Sbjct: 61 VDGLCKCGKVEVAREIFDRMD-DGDK---------------------------------- 85
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+LV ++ Y K G I+ A +F + M + WNSMI G+ +G E++ LF
Sbjct: 86 --SLVTWNVMIHGYMKSGKIELAAELFET--MPKRSLISWNSMIDGYQGNGCFYEAMKLF 141
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM----------------- 276
+ G P T + LSA + ++ + + KNG
Sbjct: 142 EALLNEGFVPINATLSSALSAVSGLAVLGNGRWIHLFVVKNGFEVAGVLESALAVFKGIA 201
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQ---IPIQPTASMLGALLNGCMNHGKLDLAET 333
K H+ ++ + G +A + + + I ++P A +LN C + G +D
Sbjct: 202 KKKLAHWTAIIVGLGMHGLADQALELITEMRRIGMKPHAITFIGVLNACSHAGLVDEGNQ 261
Query: 334 VGRKLI---ELEP 343
+ + +I ++EP
Sbjct: 262 IFQMMINEYKIEP 274
>IMGA|Medtr6g030720.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 6813427-6809123 E
EGN_Mt090430 20090702
Length = 939
Score = 144 bits (364), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 94/339 (27%), Positives = 163/339 (48%), Gaps = 37/339 (10%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGY 86
E G +HG + K G+ S+ +V N+L+ +YS ++ +A ++F + ++ VS+NS++ G
Sbjct: 192 EFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVSYNSLISGL 251
Query: 87 AKCGDISMARQVFDLM----PEQDVLSWSCL----------------------------- 113
A+ G I+ A +F M + D ++ + L
Sbjct: 252 AQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDI 311
Query: 114 -IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
++GY + + +++ +F +M++ G PN+ T S+L C LGA D G +H V+
Sbjct: 312 VVEGYGQLDNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG 371
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+ + + L+DMYAK G + AL +FR +K +DV W +MI G+ H E+L+L
Sbjct: 372 FQFNVYVSSVLIDMYAKHGKLDHALKIFRR--LKENDVVSWTAMIAGYTQHDKFTEALNL 429
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F EM G+K D I + + +SACA + + +G + +V + AR
Sbjct: 430 FKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYAR 489
Query: 293 AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
G+V EAY QI + S +L++G G + A
Sbjct: 490 CGKVREAYAAFDQIYAKDNVSW-NSLVSGFAQSGYFEEA 527
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 162/340 (47%), Gaps = 37/340 (10%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ T+P + K L +LG IH + K G++ + +VS+ LI MY+ + +A
Sbjct: 336 GIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHA 395
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
K+F + ++VSW +M+ GY + +
Sbjct: 396 LKIFRRLKENDVVSWTAMIAGYTQ-------------------------------HDKFT 424
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
EAL +F+EM+ G K + + S + ACA + ALD+GR +H + L + +LV
Sbjct: 425 EALNLFKEMQDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALV 484
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+YA+CG ++EA F K D WNS++ GFA G +E+L++F++M+ G++ +
Sbjct: 485 SLYARCGKVREAYAAFDQIYAK--DNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEIN 542
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSE-HYACMVDVMARAGQVAEA---Y 300
T+ + +SA A+ V+ + K G ++E + M+ ++ G EA +
Sbjct: 543 SFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSETEISWNSMITGYSQHGCGFEALKLF 602
Query: 301 QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ + Q+ + P +L+ C + G +D + R + E
Sbjct: 603 EDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSE 642
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 145/344 (42%), Gaps = 83/344 (24%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDG------ 85
IH +G+ES F+ N LI +Y + +A+KVF+ + ++ VSW +M+ G
Sbjct: 122 IHAKTITSGFESSTFICNPLIDLYFKNGFLSSAKKVFENLKARDSVSWVAMISGLSQNGV 181
Query: 86 --------------------------------------YAKCGDISMARQVFDLMPEQDV 107
Y++ G++S A Q+F M ++D
Sbjct: 182 LSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDR 241
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
+S++ LI G ++G + ALA+F++M + KP+ VT+ S+L ACA +GAL G+ H Y
Sbjct: 242 VSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSY 301
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
I ++G+ SD+ ++ G+ +
Sbjct: 302 AI-------------------------------KAGM--TSDI-----VVEGYGQLDNLN 323
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
+S +F++M I G+ P++ TY ++L C G + K G + ++
Sbjct: 324 KSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLI 383
Query: 288 DVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
D+ A+ G++ A + ++ S A++ G H K A
Sbjct: 384 DMYAKHGKLDHALKIFRRLKENDVVSWT-AMIAGYTQHDKFTEA 426
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 82/259 (31%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ + TF A+A + +G IHG I K GY+S+
Sbjct: 534 MNKAGLEINSFTFGSAVSAAANIANVRIGKQIHGMIRKTGYDSE---------------- 577
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+SWNSM+ GY++ G C G+
Sbjct: 578 --------------TEISWNSMITGYSQHG---------------------C---GF--- 596
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG----RMM---HHYVIDNEL 173
EAL +FE+M+ PN VT V VL AC+H+G +D+G R M H+ V E
Sbjct: 597 ----EALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEAHNLVPKPE- 651
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL- 232
+VD+ + G + A ++P D +W +++ AC+ V +++D+
Sbjct: 652 -----HYACVVDLLGRSGLLSRAKRFVEEMPIQP-DAMVWRTLLS--ACN--VHKNIDIG 701
Query: 233 -FSEMHIVGVKP-DEITYL 249
F+ H++ ++P D TY+
Sbjct: 702 EFAASHLLELEPKDSATYV 720
>IMGA|Medtr4g156800.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 38918758-38917504 H
EGN_Mt090430 20090702
Length = 404
Score = 141 bits (355), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 150/296 (50%), Gaps = 19/296 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + V P+ FP L KAS L +L ++H + G +SD +++N+LI+ Y+ F
Sbjct: 101 MRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFH- 159
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
NA KVFD P + + G I ++VFD+MP +DV+SW+ +I G+ +
Sbjct: 160 --NAGKVFDVFPKR------------GESG-IDCVKKVFDMMPVRDVVSWNTVIAGFAQN 204
Query: 121 GDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
G Y EAL + EM +G KP+ T+ S+L A ++KG+ +H Y + N + +
Sbjct: 205 GMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFI 264
Query: 180 RTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
+SL+DMYAKC ++ +L F ++ D WNS+I G +G L F M
Sbjct: 265 GSSLIDMYAKCNRLECSLRAFY--ILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKE 322
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
VKP +++ +++ ACAH + C+ + G + +VD+ A+ +
Sbjct: 323 NVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVDMYAKCDK 378
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 56/222 (25%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD T + A + G IHGY + G++ D F+ +SLI MY
Sbjct: 225 PDSFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMY------------ 272
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
AKC + + + F ++P +D +SW+ +I G V+ G++D L
Sbjct: 273 -------------------AKCNRLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDRGL 313
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI-----DNELPLTLVLRTS 182
F M KP V+ SV+ ACAHL AL GR +H ++ DNE + +S
Sbjct: 314 GFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEF-----IASS 368
Query: 183 LVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
LVDMYAKC D+ W ++I G A HG
Sbjct: 369 LVDMYAKC---------------DKRDMVAWTAIIMGCAMHG 395
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 103/246 (41%), Gaps = 15/246 (6%)
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+WS +I Y + + F MR PN S+L A L +H
Sbjct: 77 AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGL---------MKPSDVFIWNS 215
+ L L + +L++ YAK + VF SG+ M DV WN+
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196
Query: 216 MIGGFACHGLVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
+I GFA +G+ E+LD+ EM G +KPD T ++L A V + +N
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVRN 256
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETV 334
G + ++D+ A+ ++ + + +P + S +++ GC+ +G+ D
Sbjct: 257 GFDGDVFIGSSLIDMYAKCNRLECSLRAFYILPRKDAISW-NSIIAGCVQNGEFDRGLGF 315
Query: 335 GRKLIE 340
R++++
Sbjct: 316 FRRMLK 321
>IMGA|Medtr4g156790.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 38917460-38916651 H
EGN_Mt090430 20090702
Length = 269
Score = 140 bits (354), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 119/195 (61%), Gaps = 6/195 (3%)
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
+ +L+AC+H GLV E W +F+ + ++ G+ P EHYA + D++ RAG++ EAY F+ +
Sbjct: 1 MAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEHYAAVADLLGRAGRLEEAYDFISNMR 60
Query: 308 -IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKAR 366
+QPT S+ LL C H ++LAE V KL+ ++ G YV +SN+Y+ +RW A
Sbjct: 61 GVQPTGSVWSILLAACRAHKSVELAEKVLDKLLSVDSENMGAYVLMSNIYSAAQRWKDAA 120
Query: 367 SMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK---HIV 423
+R M + G+KK+P S++E+ +H F+A DKSHP ++I L ++ QM+ +++
Sbjct: 121 RLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDKSHPYYDKINKALDVLLEQMEKEGYVI 180
Query: 424 DYENQEYYFYDNEGK 438
D NQ + D E K
Sbjct: 181 D-TNQVLHDVDEELK 194
>IMGA|Medtr4g155290.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 38306905-38304954 H
EGN_Mt090430 20090702
Length = 340
Score = 138 bits (348), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 102/176 (57%), Gaps = 1/176 (0%)
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
T + +L AC+H GL +F + K+ G+TP S+HY CM+D++ RAG + EA+ +
Sbjct: 24 TGVGVLLACSHTGLTDRGTEYFYSMSKDYGITPNSKHYNCMIDLLGRAGLLEEAHNLMRN 83
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKA 365
+P +P A+ GALL HG +L E + +EP+ G YV LSN+YA +W
Sbjct: 84 MPFEPDAATWGALLGASRIHGNAELGEKAAEMVFNMEPNNAGMYVLLSNLYATLGKWVDV 143
Query: 366 RSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKH 421
+R M ++G++K PGYS+VE+ +H+F D HP ++IY L I +MKH
Sbjct: 144 GKLRLKMRQLGIQKIPGYSWVEVQNKIHKFTVGDCFHPEKDRIYAYLEEIDLKMKH 199
>IMGA|Medtr4g032250.1 Protein kinase chr04_pseudomolecule_IMGAG_V3
7660368-7657729 E EGN_Mt090430 20090702
Length = 839
Score = 137 bits (346), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 120/537 (22%), Positives = 205/537 (38%), Gaps = 130/537 (24%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
++ G PD T L A + LG +H ++ ++G D V SL+ MY+
Sbjct: 253 LVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKCGL 312
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ ARKVFDG+ N++SW ++++GY + G GY R
Sbjct: 313 VQEARKVFDGMREHNVMSWTALVNGYVRGG------------------------GGYER- 347
Query: 121 GDYDEALAVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVL 179
EA+ +F M + G PN T VL ACA L D G +H I L +
Sbjct: 348 ----EAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCV 403
Query: 180 RTSLVDMYAKCGAIQEALH----VFRSGLMKPSDV------------------------- 210
LV +YAK G ++ A +F L+ + V
Sbjct: 404 GNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVKDFNLNSEQDLDREVEYVGS 463
Query: 211 ----FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD---------------------- 244
F + S++ G AC G + + + + + +G + D
Sbjct: 464 GVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDLSVNNALISMYSKCGNKEAALQ 523
Query: 245 ---------EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ 295
IT+ ++++ A G +A F + + G+ P Y ++ + G
Sbjct: 524 VFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLETGVKPNDVTYIAVLSACSHVGL 583
Query: 296 VAEAY------------------------------------QFLCQIPIQPTASMLGALL 319
+ EA+ +F+ +P A + L
Sbjct: 584 IDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSEAIEFINSMPFDADALVWRTFL 643
Query: 320 NGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKK 379
C H L E + ++E EPH Y+ LSN+YA RW+ ++R+ M++ + K
Sbjct: 644 GSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYATEGRWEDVAAIRKNMKQKQITK 703
Query: 380 SPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMKHIVDYENQEYYFYDNE 436
G S++E+ +H+F D HP ++QIY L + ++K++ N ++ +D E
Sbjct: 704 EAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALKIKNVGYVPNTDFVLHDVE 760
Score = 123 bits (309), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 100/317 (31%), Positives = 154/317 (48%), Gaps = 61/317 (19%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR--ELGLAIHGYITKAGY-ESDRFVSNSLIHMYSS 57
+L+ GV+P+ + F A ACL + GL + G++ K GY +S V LI M+
Sbjct: 147 LLQDGVYPNE--YCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMF-- 202
Query: 58 FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGY 117
VK D+ AR+VFD M E++V++W+ +I
Sbjct: 203 ---------------VKG-----------CSLADLESARKVFDKMREKNVVTWTLMITRL 236
Query: 118 VRKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ G DEA+ +F EM VS G P+ T+ ++ CA + L G+ +H +VI + L L
Sbjct: 237 AQYGYNDEAIDLFLEMLVSSGYVPDRFTLTGLISVCAEIQFLSLGKELHSWVIRSGLVLD 296
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF--ACHGLVKESLDLFS 234
L + SLVDMYAKCG +QEA VF M+ +V W +++ G+ G +E++ +FS
Sbjct: 297 LCVGCSLVDMYAKCGLVQEARKVFDG--MREHNVMSWTALVNGYVRGGGGYEREAMRMFS 354
Query: 235 EMHIV-GVKPDEITYLNLLSACA-----------HGGLVKEAWYFFDCLGKNGMTPKSEH 282
M + GV P+ T+ +L ACA HG +K DC+G NG
Sbjct: 355 NMLLQGGVAPNCFTFSGVLKACASLPDFDFGEQVHGQTIKLGLSAIDCVG-NG------- 406
Query: 283 YACMVDVMARAGQVAEA 299
+V V A++G++ A
Sbjct: 407 ---LVSVYAKSGRMESA 420
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 2/158 (1%)
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
+T +L C G+++HH + + LPL +L SL+ +Y+K A +F+S
Sbjct: 53 ITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDTLLLNSLITLYSKSNDPITAFSIFQS 112
Query: 203 GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNLLSACAHGGLV 261
DV ++S+I FA + +++++F ++ + GV P+E + ++ AC GG
Sbjct: 113 MENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLLLQDGVYPNEYCFTAVIRACLKGGFF 172
Query: 262 KEAWYFFDCLGKNGMTPKSEHYAC-MVDVMARAGQVAE 298
K F + K G C ++D+ + +A+
Sbjct: 173 KTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCSLAD 210
>IMGA|Medtr2g105310.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 25053866-25055739 E
EGN_Mt090430 20090702
Length = 295
Score = 136 bits (342), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 115/193 (59%), Gaps = 4/193 (2%)
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFF-DCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
++P+ ++Y + L+AC+H GL+ E F D + +P+ EHY C+VD+ +RAG++ EA
Sbjct: 98 LEPNGVSYTSALTACSHAGLIDEGLKIFADIKRDHRNSPRIEHYGCLVDLYSRAGRLKEA 157
Query: 300 YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIF 359
+ + ++P+ P +LG+LL C G ++LAE V + +EL P D YV SN+YA
Sbjct: 158 WDVIKKMPMMPNEVVLGSLLAACRTQGDVELAEKVMKYQVELYPGGDSNYVLFSNIYAAV 217
Query: 360 RRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYM---MLGFIV 416
+WD A +R M+ G++K+ +S +E+ +H+FV+ DK H ++ IY +L F +
Sbjct: 218 GKWDGASKVRREMKERGLQKNLAFSSIEIDSGIHKFVSGDKYHEENDYIYSALELLSFEL 277
Query: 417 SQMKHIVDYENQE 429
++ D+ +E
Sbjct: 278 HLYGYVPDFSGKE 290
>IMGA|AC235756_8.1 Pentatricopeptide repeat AC235756.1 67772-66182 E
EGN_Mt090430 20090702
Length = 498
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 147/294 (50%), Gaps = 33/294 (11%)
Query: 6 VFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNAR 65
V PD +T +A A A L +LG ++HG++ + G ++ ++NSL+H+Y I NA
Sbjct: 175 VSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHLYGKTGSIKNAS 234
Query: 66 KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDE 125
+F + K+++SW++M+ YA G E DVL
Sbjct: 235 NLFREMSDKDIISWSTMVACYADNG------------AETDVLD---------------- 266
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
+F EM KPN VT+VSVL ACA + L++G +H ++ + + T+L+D
Sbjct: 267 ---LFNEMLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMD 323
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
MY KC + ++A+ +F M DV W + G+A +G+V ES+ +F M G +PD
Sbjct: 324 MYMKCFSPEKAVDLFNR--MPKKDVIAWAVLFSGYADNGMVHESMWVFRNMLSSGTRPDA 381
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
I + +L+ + G++++A + KNG A +++V A+ + +A
Sbjct: 382 IALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIGASLIEVYAKCSSIEDA 435
Score = 132 bits (332), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 85/250 (34%), Positives = 126/250 (50%), Gaps = 34/250 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
PD+ + K+ A L K LG IHG++ K + D FV ++LI
Sbjct: 75 PDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALI--------------- 119
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEAL 127
D Y KCG ++ A +VF P+ DV+ W+ +I GY + G + AL
Sbjct: 120 ----------------DLYTKCGQMNDAVKVFMEYPKPDVVLWTSIISGYEQSGSPELAL 163
Query: 128 AVFEEMRVSGP-KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDM 186
A F M VS P+ VT+VSV ACA L GR +H +V L L L SL+ +
Sbjct: 164 AFFSRMVVSEKVSPDPVTLVSVASACAQLSNFKLGRSVHGFVKRKGLDNKLCLANSLLHL 223
Query: 187 YAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
Y K G+I+ A ++FR M D+ W++M+ +A +G + LDLF+EM +KP+ +
Sbjct: 224 YGKTGSIKNASNLFRE--MSDKDIISWSTMVACYADNGAETDVLDLFNEMLDKRIKPNWV 281
Query: 247 TYLNLLSACA 256
T +++L ACA
Sbjct: 282 TVVSVLRACA 291
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 105/224 (46%), Gaps = 33/224 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML + P+ +T + +A AC+ E G+ IH G+E + VS +L+ MY
Sbjct: 271 MLDKRIKPNWVTVVSVLRACACISNLEEGMKIHELAVNYGFEMETTVSTALMDMY----- 325
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KC A +F+ MP++DV++W+ L GY
Sbjct: 326 --------------------------MKCFSPEKAVDLFNRMPKKDVIAWAVLFSGYADN 359
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G E++ VF M SG +P+ + +V +L + LG L + +H +VI N +
Sbjct: 360 GMVHESMWVFRNMLSSGTRPDAIALVKILTTISELGILQQAVCLHAFVIKNGFENNQFIG 419
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
SL+++YAKC +I++A VF+ M DV W+S+I + HG
Sbjct: 420 ASLIEVYAKCSSIEDANKVFKG--MTYKDVVTWSSIIAAYGFHG 461
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 100/186 (53%), Gaps = 8/186 (4%)
Query: 78 SWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMR-VS 136
S++ ++ + I A ++F P + V W+ L+ Y +G++ E L++F +M VS
Sbjct: 8 SFSEVIGNLLQYASIHHAHKLFQETPHRTVYLWNALLRSYCFEGEWVETLSLFRQMNNVS 67
Query: 137 G----PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
+P+ ++ L +CA L L G+++H ++ + + + ++L+D+Y KCG
Sbjct: 68 SVSIEERPDNYSVSIALKSCAGLRKLLLGKVIHGFLKKVRIDGDMFVGSALIDLYTKCGQ 127
Query: 193 IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV-GVKPDEITYLNL 251
+ +A+ VF KP DV +W S+I G+ G + +L FS M + V PD +T +++
Sbjct: 128 MNDAVKVFME-YPKP-DVVLWTSIISGYEQSGSPELALAFFSRMVVSEKVSPDPVTLVSV 185
Query: 252 LSACAH 257
SACA
Sbjct: 186 ASACAQ 191
>IMGA|Medtr4g022170.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 4448587-4446437 E
EGN_Mt090430 20090702
Length = 688
Score = 132 bits (331), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 158/333 (47%), Gaps = 35/333 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G++P+ + + + KR LG +H ++ K +++
Sbjct: 311 MVEEGIYPNSVIMTIVLPVIGEVCKRRLGQEVHAFVLKTKSYAEK--------------- 355
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+PV++ +++D Y KCGD+S AR VF PE++V+ W+ L+ GY
Sbjct: 356 ----------VPVQS-----ALIDMYCKCGDLSSARAVFYSSPERNVVCWTALMSGYASV 400
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G ++AL M+ G +P+ VT+ +VL CA L AL++G+ +H Y + + + L
Sbjct: 401 GRLEQALRAVIWMQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLS 460
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
+SLV MY+KCG ++ + +F G M+ +V W +MI + +G + E+L + M +
Sbjct: 461 SSLVVMYSKCGVVEYSTRLF--GDMEQRNVISWTAMIDSYIENGHLYEALGVIRSMQLSK 518
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+PD + +LS C L+K + K T A ++++ G V +A
Sbjct: 519 HRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVSAELINMYGALGDVDKAN 578
Query: 301 QFLCQIPIQPT---ASMLGALLNGCMNHGKLDL 330
+P++ + +++ A + G +DL
Sbjct: 579 LVFSAVPVKGSMTWTALIRAYEYNELYQGAIDL 611
Score = 130 bits (326), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 33/302 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G PD +T + A L E G IH Y K + + +S+SL+ MYS
Sbjct: 413 MQQEGFRPDVVTVATVLPICAQLRALEQGKQIHAYALKHWFLPNVSLSSSLVVMYS---- 468
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
KCG + + ++F M +++V+SW+ +ID Y+
Sbjct: 469 ---------------------------KCGVVEYSTRLFGDMEQRNVISWTAMIDSYIEN 501
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G EAL V M++S +P+ V M +L C L L G+ +H ++ + +
Sbjct: 502 GHLYEALGVIRSMQLSKHRPDSVAMSRMLSVCGELKLLKHGKEIHGQILKRDFTSVHFVS 561
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
L++MY G + +A VF + +K S W ++I + + L + ++DLF +M
Sbjct: 562 AELINMYGALGDVDKANLVFSAVPVKGS--MTWTALIRAYEYNELYQGAIDLFDQMRSDR 619
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
P+ T+ +LS C G V +A F+ + K + EH+A MV ++ R GQ+ +A
Sbjct: 620 FSPNPFTFEVILSVCERAGFVNDASKIFNLMPKYKIEASKEHFAIMVRLLTRYGQLEKAQ 679
Query: 301 QF 302
+F
Sbjct: 680 RF 681
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/315 (25%), Positives = 140/315 (44%), Gaps = 15/315 (4%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV----KNLVSWNSMLD 84
LAI Y+ + G + +SLI + +++ I + KN ++
Sbjct: 95 ALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGLEKNTFLLTKLVQ 154
Query: 85 GYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYV----RKGDYDEALAVFEEMRVSGPK 139
Y CG + A ++FD +P E V W+ L+ G V RK Y + + + +MR G +
Sbjct: 155 MYTSCGSLEDALKLFDELPDESSVYPWNALLRGTVVFGGRKKQYIDVVKTYSKMRELGVE 214
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
N + SV+ + A A +G H +I N L + +LRT L+D+Y KCG ++ A V
Sbjct: 215 LNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDLYFKCGKVKLARRV 274
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI---TYLNLLSACA 256
F + DV +W +M+ GF+ + L +E L+ M G+ P+ + L ++
Sbjct: 275 FEEIPERERDVVVWGTMLSGFSHNRLQREVLEYVKWMVEEGIYPNSVIMTIVLPVIGEVC 334
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLG 316
L +E F L K + ++D+ + G ++ A P +
Sbjct: 335 KRRLGQEVHAF--VLKTKSYAEKVPVQSALIDMYCKCGDLSSARAVFYSSP-ERNVVCWT 391
Query: 317 ALLNGCMNHGKLDLA 331
AL++G + G+L+ A
Sbjct: 392 ALMSGYASVGRLEQA 406
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 109/221 (49%), Gaps = 7/221 (3%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
I + R+ +EALA+ + + +G N T S++ AC +L G+ +H ++ N L
Sbjct: 83 IKNFARQNKLNEALAILDYVDQNGIPVNATTFSSLIAACIRTNSLSIGKQIHTHIRINGL 142
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES---- 229
L T LV MY CG++++AL +F L S V+ WN+++ G G K+
Sbjct: 143 EKNTFLLTKLVQMYTSCGSLEDALKLF-DELPDESSVYPWNALLRGTVVFGGRKKQYIDV 201
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+ +S+M +GV+ + ++ +++ + A + L KNG+ C++D+
Sbjct: 202 VKTYSKMRELGVELNVYSFSSVIKSFAAAPAFYQGLKTHALLIKNGLVDSDILRTCLIDL 261
Query: 290 MARAGQVAEAYQFLCQIPIQPTASML-GALLNGCMNHGKLD 329
+ G+V A + +IP + ++ G +L+G +H +L
Sbjct: 262 YFKCGKVKLARRVFEEIPERERDVVVWGTMLSG-FSHNRLQ 301
>IMGA|Medtr5g077210.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 28430243-28431367 H
EGN_Mt090430 20090702
Length = 347
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/301 (29%), Positives = 148/301 (49%), Gaps = 34/301 (11%)
Query: 29 GLAIHGYITKA-----GYESDRFVSNSL-IHMYSSFRDIPNARKVFDGIPVKNLVSWNSM 82
GL G I +A G +SN+L I Y+ I ++K+F+ + +K+L S N+M
Sbjct: 16 GLVSIGRIKEAEMIFYGLRDKTLISNNLMIKGYAMSGRIRKSKKLFEKMSLKHLTSLNTM 75
Query: 83 LDGYAKCGDISMARQVFDLMP-EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN 141
+ Y+K G++ A ++FD E++ +SW+ ++ GY+ G + EAL ++ MR +
Sbjct: 76 ITVYSKNGELDEAVKLFDKTKGERNCVSWNSMMSGYIHNGQHSEALKLYVTMRRYSVEYR 135
Query: 142 EVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR 201
T + CA+L + +G+++H ++ + + T+LVD Y+KCG + +A F
Sbjct: 136 RSTFSVLSGGCAYLCSFQQGQLLHAHLAKTPYQENVYVGTALVDFYSKCGHLADAQRSFT 195
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
S + P+ W ++I G+A HG L A A
Sbjct: 196 S-IFSPNVAAAWTALINGYAYHGCD----------------------LRRFHASAQ---F 229
Query: 262 KEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLN 320
E FF + N +TP EHY +VD++ R+G+V EA +F+ Q PI+ + GALLN
Sbjct: 230 DEGLEFFHSMQINYRVTPTIEHYTWVVDLLGRSGRVKEAEEFIIQTPIKADGLIRGALLN 289
Query: 321 G 321
Sbjct: 290 A 290
>IMGA|Medtr5g045520.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 19042268-19036382 E
EGN_Mt090430 20090702
Length = 707
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 179/365 (49%), Gaps = 33/365 (9%)
Query: 82 MLDGYAKCGDISMARQVFDLM--PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+L+ Y +CG + A VF M E+ ++ +D +G+ EA+ V + +
Sbjct: 279 ILEMYFQCGSVDDAVNVFRNMNMTERKLIEE---LDSSCMEGEVKEAIDVLQVLEKFHIL 335
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
+ + ++ C +L++ +++H YV+ + PL + +++MY +CG++ +A++V
Sbjct: 336 VDLDRCLRLMQQCGKTKSLEEAKVVHRYVLQHLSPLKVSTCNGILEMYFQCGSVDDAVNV 395
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F++ M D+ MI A +G ++S+DLF++ G+KPD ++ + AC+ G
Sbjct: 396 FKN--MTERDLTTICIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACSMLG 453
Query: 260 LVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGAL 318
+ E F+ + ++ + P EHY +VD++ G + EA +F+ ++P++P+ + L
Sbjct: 454 DIVEGMLHFESMSRDYDIVPTMEHYVSLVDMIGSIGHLDEALEFIEKMPMEPSVEVWETL 513
Query: 319 LNGCMNHGKLDLAETVGRKLIELEPHQ--DGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
+N C HG +L + + +L+P + + VGL + D ++ ++
Sbjct: 514 MNSCRVHGNTELGDRCAELVEKLDPSRLNEKSKVGL----LLIETSDITKNKKQ------ 563
Query: 377 VKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK------------HIVD 424
K P + V +H + A D S P + IY++L + QMK H VD
Sbjct: 564 -NKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYVLLRRLRVQMKEAGYIAETRFCLHDVD 622
Query: 425 YENQE 429
E++E
Sbjct: 623 QEDKE 627
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P+K + + N +L+ Y +CG + A VF M E+D+ + +I + G ++++ +F
Sbjct: 370 PLK-VSTCNGILEMYFQCGSVDDAVNVFKNMTERDLTTICIMIKQLAKNGFAEDSIDLFT 428
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI--DNELPLTLVLRTSLVDMYAK 189
+ + SG KP+ + V AC+ LG + +G M+H + D ++ T+ SLVDM
Sbjct: 429 QFKRSGLKPDGQMFIGVFGACSMLGDIVEG-MLHFESMSRDYDIVPTMEHYVSLVDMIGS 487
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
G + EAL M+PS V +W +++ HG
Sbjct: 488 IGHLDEALEFIEKMPMEPS-VEVWETLMNSCRVHG 521
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 3/151 (1%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+D ++G+ +A+AV +E+ + + ++ C L++ +++H YV+ +
Sbjct: 210 LDEVCKEGEVKKAIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVHIYVLQHLS 269
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
PLT+ +++MY +CG++ +A++VFR+ M + + G VKE++D+
Sbjct: 270 PLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERKLI---EELDSSCMEGEVKEAIDVL 326
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+ + D L L+ C ++EA
Sbjct: 327 QVLEKFHILVDLDRCLRLMQQCGKTKSLEEA 357
>IMGA|Medtr3g043340.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 11734184-11735764 H
EGN_Mt090430 20090702
Length = 487
Score = 119 bits (299), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 164/354 (46%), Gaps = 15/354 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L++G PD +TF L K K + L H ++ G+ D+F +LI+ +
Sbjct: 129 ILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLCKIGE 188
Query: 61 IPNA----RKVFDGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWS 111
A RK+ DG VK N+V +N+++D K + A +++ M + DV+++S
Sbjct: 189 TRTALQMLRKI-DGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFS 247
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LI G+ G +EA +F EM + P+ T ++ A G L + M ++
Sbjct: 248 ALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKE 307
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKES 229
+ +V +SL+D Y + +A HV S + + + +MI GF +V E+
Sbjct: 308 GVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEA 367
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
L LF++M G+ PD++TY +L+ G + AW D + NG Y C++D
Sbjct: 368 LSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDA 427
Query: 290 MARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
+ + V +A + +I IQP L+ G G+L A+ V + L+
Sbjct: 428 LCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLS 481
>IMGA|Medtr2g083090.1 WD-40 repeat; Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 19005903-19007114 H
EGN_Mt090430 20090702
Length = 404
Score = 119 bits (298), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 133/268 (49%), Gaps = 9/268 (3%)
Query: 7 FPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARK 66
F D + A + R+ LA Y D SN+LI+ Y ++ A +
Sbjct: 119 FHDRNEVSYAAMIMGLVKARKFDLAEKLYREAPHEFRDPVCSNALINGYLKIGEMNEALR 178
Query: 67 VFD--GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
VF+ G+ +++VSW++++ G + G I AR +FD MPE++V+SWS +IDGY+ KG ++
Sbjct: 179 VFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDRMPERNVVSWSAMIDGYMEKGLFE 238
Query: 125 EALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+F +MR G + N TM ++ C + G + +G +H V VL ++
Sbjct: 239 NGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTI 298
Query: 184 VDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
+ MY+ G A VF SG M D+ WNS+I G+ + V + ++F M +
Sbjct: 299 ITMYSLFGYTDMAKKVF-SG-MGNKDLVTWNSLISGYIYNNEVDAAYEVFERMP----EK 352
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCL 271
D I++ ++ A G + +A FD L
Sbjct: 353 DLISWTAMIRGFATDGRIGKAVELFDTL 380
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 80/135 (59%), Gaps = 1/135 (0%)
Query: 1 MLRVGVFP-DHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFR 59
M R GV + T + K + + G+ IHG +++ G+E +SN++I MYS F
Sbjct: 247 MRREGVVEVNSTTMTIMIKGCGNCGRVKEGIQIHGLVSRLGFEFGSVLSNTIITMYSLFG 306
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
A+KVF G+ K+LV+WNS++ GY ++ A +VF+ MPE+D++SW+ +I G+
Sbjct: 307 YTDMAKKVFSGMGNKDLVTWNSLISGYIYNNEVDAAYEVFERMPEKDLISWTAMIRGFAT 366
Query: 120 KGDYDEALAVFEEMR 134
G +A+ +F+ ++
Sbjct: 367 DGRIGKAVELFDTLK 381
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVR 119
++ A +F+ + KN+V+W +ML YA+ G I+ AR++FD MPE+ +++ +I GY+R
Sbjct: 45 NVNAAETIFNRMSQKNIVTWTAMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIR 104
Query: 120 KG-DYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTL- 177
G + +A +F S NEV+ +++ D ++ E P
Sbjct: 105 NGCNVTKAYELF----TSFHDRNEVSYAAMIMGLVKARKFDLAEKLYR-----EAPHEFR 155
Query: 178 --VLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSE 235
V +L++ Y K G + EAL VF + + DV W++++GG G + + LF
Sbjct: 156 DPVCSNALINGYLKIGEMNEALRVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDR 215
Query: 236 MHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP-KSEHYACMVDVMARAG 294
M + + +++ ++ GL + + F + + G+ S M+ G
Sbjct: 216 MP----ERNVVSWSAMIDGYMEKGLFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCG 271
Query: 295 QVAEAYQ 301
+V E Q
Sbjct: 272 RVKEGIQ 278
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 109/221 (49%), Gaps = 16/221 (7%)
Query: 50 SLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCG-DISMARQVFDLMPEQDVL 108
+++ +Y+ I ARK+FD +P + ++N+M+ GY + G +++ A ++F +++ +
Sbjct: 66 AMLTVYAQNGQITTARKLFDEMPERTTATYNAMISGYIRNGCNVTKAYELFTSFHDRNEV 125
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL-GALDKGRMMHHY 167
S++ +I G V+ +D A ++ E P+E +C+ A + G L G M
Sbjct: 126 SYAAMIMGLVKARKFDLAEKLYRE------APHEFR--DPVCSNALINGYLKIGEMNEAL 177
Query: 168 VIDNELPLT---LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+ + ++ +V +++V + G I A +F M +V W++MI G+ G
Sbjct: 178 RVFENVGVSKRDVVSWSAVVGGLCRDGRIDNARMLFDR--MPERNVVSWSAMIDGYMEKG 235
Query: 225 LVKESLDLFSEMHIVG-VKPDEITYLNLLSACAHGGLVKEA 264
L + LF +M G V+ + T ++ C + G VKE
Sbjct: 236 LFENGFGLFLDMRREGVVEVNSTTMTIMIKGCGNCGRVKEG 276
>IMGA|Medtr5g033110.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 13489315-13492920 H
EGN_Mt090430 20090702
Length = 877
Score = 119 bits (297), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 153/313 (48%), Gaps = 14/313 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML GV P+ ++F + A + + A + K G+ D F SLI Y +
Sbjct: 181 MLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHE 240
Query: 61 IPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ +A KVF+ +P ++N VS+ +++ G+ + G I A ++F M E DV +++
Sbjct: 241 LGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTV 300
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L+ + G EAL FEEM +G +PN T ++ +G +D+G M +++
Sbjct: 301 LVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKG 360
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF----IWNSMIGGFACHGLVKE 228
L ++V +L+D Y K G +++A+ V S MK + V +N +I GF +
Sbjct: 361 LVSSVVPFNALIDGYCKRGMMEDAICVLDS--MKLNKVCPNSRTYNELICGFCRKKSMDR 418
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
++ L ++M+ + P+ +TY L+ +V AW + K+G P + +D
Sbjct: 419 AMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFID 478
Query: 289 VMARAGQVAEAYQ 301
+ + G+V +A+Q
Sbjct: 479 CLCKMGKVEQAHQ 491
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 165/406 (40%), Gaps = 15/406 (3%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G FPD T+ L A + K L + + G E + + LI + +
Sbjct: 290 GCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEG 349
Query: 65 RKVFDGIPVKNLVS----WNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDG 116
++ + K LVS +N+++DGY K G + A V D M V +++ LI G
Sbjct: 350 MEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICG 409
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ RK D A+A+ +M + PN VT +++ +D +HH +I +
Sbjct: 410 FCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPD 469
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV--FIWNSMIGGFACHGLVKESLDLFS 234
+ +D K G +++A VF S K ++ F++ ++I G+ ++ LF
Sbjct: 470 QRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFK 529
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
M G P+ IT+ LL G V++A D +GK P Y +++ + R
Sbjct: 530 RMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRES 589
Query: 295 QVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGR-YV 350
A FL Q+ QP A + G+L AE + K+ E D Y
Sbjct: 590 DFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYD 649
Query: 351 GLSNVYAIFRRWDKARSMREAMERMGVKKS-PGYSFVEMHGALHRF 395
L N Y + D A + M G + S YS + H ++
Sbjct: 650 VLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKY 695
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 122/272 (44%), Gaps = 28/272 (10%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQD----VLSWSCLIDGYVRKGDYDEALAVFEEMRV 135
NSM+ C AR V +L+ + V S++ L R G DE +F++M
Sbjct: 127 NSMIKS---CVSSHEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLN 183
Query: 136 SGPKPNEV---TMVSVLCACAHL---GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
G +PN + TMV+ C ++ A G M + D+ TSL+ Y K
Sbjct: 184 DGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDS------FTYTSLILGYCK 237
Query: 190 CGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
+ +A VF + G ++ + + ++I GF G + E+L+LF +M G PD
Sbjct: 238 IHELGDAYKVFEIMPQEGCLR--NEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDV 295
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
TY L++A G EA FF+ + +NG+ P Y ++D + G++ E + L
Sbjct: 296 PTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLST 355
Query: 306 IPIQPTASML---GALLNGCMNHGKLDLAETV 334
+ + S + AL++G G ++ A V
Sbjct: 356 MLEKGLVSSVVPFNALIDGYCKRGMMEDAICV 387
>IMGA|Medtr2g110310.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 25871900-25871218 E
EGN_Mt090430 20090702
Length = 204
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 75/217 (34%), Positives = 107/217 (49%), Gaps = 33/217 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + PD TF F+ KA A L LG+ +H + K G++ D FV +++ YS
Sbjct: 21 MHKAAIVPDSFTFSFVLKACARLNLFHLGMMMHSLVFKTGFDCDVFVKTNVVCFYSKCGF 80
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +A K+FD + VKN+VSW M+ CG I
Sbjct: 81 LKDAWKMFDDMVVKNIVSWTGMI-----CGCIEF-------------------------- 109
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + EA+ +F + SG +P+ +V VL ACA LG LD GR + + D L + +
Sbjct: 110 GKFREAVYLFRGLLESGLRPDGFVIVRVLRACARLGDLDSGRWIDRCLRDCGLSRNVFVA 169
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
TSLVDMY KCG+++EA VF M DV W+ MI
Sbjct: 170 TSLVDMYTKCGSMEEARFVFDG--MVEKDVVCWSVMI 204
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 91/187 (48%), Gaps = 2/187 (1%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+I G V K +++A+ ++ M + P+ T VL ACA L G MMH V
Sbjct: 1 MIHGMVSKDRFNDAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGMMMHSLVFKTG 60
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+ ++T++V Y+KCG +++A +F ++K ++ W MI G G +E++ L
Sbjct: 61 FDCDVFVKTNVVCFYSKCGFLKDAWKMFDDMVVK--NIVSWTGMICGCIEFGKFREAVYL 118
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F + G++PD + +L ACA G + + CL G++ +VD+ +
Sbjct: 119 FRGLLESGLRPDGFVIVRVLRACARLGDLDSGRWIDRCLRDCGLSRNVFVATSLVDMYTK 178
Query: 293 AGQVAEA 299
G + EA
Sbjct: 179 CGSMEEA 185
>IMGA|Medtr3g009070.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 1252196-1251012 E
EGN_Mt090430 20090702
Length = 212
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/190 (35%), Positives = 102/190 (53%), Gaps = 23/190 (12%)
Query: 156 GALDKGRMMHHYVID--NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW 213
GAL+ GR +H +V D N ++ + +LV+MYAKCGA++EA F + MK +V W
Sbjct: 23 GALEFGRKVHSFVRDGVNSFGESISVFNALVEMYAKCGAVEEAYETFSN--MKRKNVVSW 80
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+ MI G A H + +L +L AC+HGGLV + +FD + +
Sbjct: 81 SVMILGLASH------------------EARRNYFLGVLCACSHGGLVDDGRRYFDIMNR 122
Query: 274 N-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAE 332
+ P + Y CMVD++ RAG V EAY + +P++ + LL C N+G ++L E
Sbjct: 123 YYNIKPTIKRYGCMVDLLGRAGLVVEAYTLIKSMPVECNVIIWRTLLAACRNYGNVELGE 182
Query: 333 TVGRKLIELE 342
V + L+ELE
Sbjct: 183 KVRKHLLELE 192
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 81/167 (48%), Gaps = 28/167 (16%)
Query: 67 VFDGIPV--KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
V DG+ +++ +N++++ YAKCG + A + F M ++V+SWS +I G
Sbjct: 35 VRDGVNSFGESISVFNALVEMYAKCGAVEEAYETFSNMKRKNVVSWSVMILG-------- 86
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR----MMHHYVIDNELPLTLVLR 180
LA E R + VLCAC+H G +D GR +M+ Y + T+
Sbjct: 87 --LASHEARR--------NYFLGVLCACSHGGLVDDGRRYFDIMNRYY---NIKPTIKRY 133
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
+VD+ + G + EA + +S + +V IW +++ +G V+
Sbjct: 134 GCMVDLLGRAGLVVEAYTLIKS-MPVECNVIIWRTLLAACRNYGNVE 179
>IMGA|Medtr6g089890.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 18837216-18839257 F
EGN_Mt090430 20090702
Length = 572
Score = 116 bits (290), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 160/356 (44%), Gaps = 21/356 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L++G PD +TF L+K + + H + G+ D+ +LIH +
Sbjct: 146 ILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGE 205
Query: 61 IPNARKVF---DGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-------DVLS 109
A + DG V+ N+V +N+++D K + + + FDL E DV++
Sbjct: 206 TRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK---VKLVNEAFDLFSEMVSKGISPDVVT 262
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
+S LI G+ G +A+ +F +M + KP+ T ++ A G + +G+ + ++
Sbjct: 263 YSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMM 322
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS---GLMKPSDVFIWNSMIGGFACHGLV 226
+ V SL+D Y + +A +F + G + P D+ ++ MI GF
Sbjct: 323 KQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP-DIQSYSIMINGFCKIKKF 381
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
E+++LF EMH + PD +TY +L+ + G + A D + G+ P Y +
Sbjct: 382 DEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSI 441
Query: 287 VDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+D + + QV +A L + QP S L+ G GKL+ A V L+
Sbjct: 442 LDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLL 497
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 116/258 (44%), Gaps = 10/258 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + PD TF L A K + G + + K G + + NSL+ Y ++
Sbjct: 286 MILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKE 345
Query: 61 IPNARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A+ +F+ + ++ S++ M++G+ K A +F M + DV+++S
Sbjct: 346 VNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSS 405
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LIDG + G AL + ++M G PN T S+L A +DK + D
Sbjct: 406 LIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKG 465
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
+ + L+ + G +++A VF L+K DV+ + MI GF GL E+L
Sbjct: 466 FQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEAL 525
Query: 231 DLFSEMHIVGVKPDEITY 248
L S+M G PD TY
Sbjct: 526 ALLSKMEDNGCIPDAKTY 543
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/280 (23%), Positives = 130/280 (46%), Gaps = 10/280 (3%)
Query: 68 FDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDY 123
F GI NLV+ N +++ + + G I A VF + + D ++++ L G KG
Sbjct: 113 FRGIK-PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQI 171
Query: 124 DEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+A +++ G ++++ +++ +G + V N + +V+ ++
Sbjct: 172 QQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTI 231
Query: 184 VDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGV 241
+D K + EA +F + K DV ++++I GF G +K+++DLF++M + +
Sbjct: 232 IDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENI 291
Query: 242 KPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA-- 299
KPD T+ L++A G +KE FD + K G+ P Y ++D +V +A
Sbjct: 292 KPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKS 351
Query: 300 -YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKL 338
+ + Q + P ++NG K D A + +++
Sbjct: 352 IFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEM 391
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/353 (21%), Positives = 145/353 (41%), Gaps = 50/353 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD +T+ L L K + + + + + D + N L++ +
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGK 310
Query: 61 IPNARKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWS 111
+ + VFD GI N V++NS++DGY +++ A+ +F+ M + D+ S+S
Sbjct: 311 MKEGKTVFDMMMKQGIK-PNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYS 369
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+I+G+ + +DEA+ +F+EM P+ VT
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTY-------------------------- 403
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKES 229
+SL+D +K G I AL + + P ++ +NS++ V ++
Sbjct: 404 ---------SSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKA 454
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+ L ++ G +PD TY L+ G +++A F+ L G Y M+
Sbjct: 455 IALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQG 514
Query: 290 MARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLI 339
G EA L ++ P A ++ + D+AE + R++I
Sbjct: 515 FCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMI 567
>IMGA|AC233668_43.1 Pentatricopeptide repeat AC233668.2
177168-181391 E EGN_Mt090430 20090702
Length = 686
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/367 (24%), Positives = 170/367 (46%), Gaps = 52/367 (14%)
Query: 82 MLDGYAKCGDISMARQVFDLM--PEQDVLSWSCLIDGYVRKGDYDEA---LAVFEEMRVS 136
+L+ Y +CG + A VF M E+ ++ +D +G+ EA L V E+ +
Sbjct: 279 ILEMYFQCGSVDDAVNVFRNMNMTERKLIEE---LDSSCMEGEVKEAIDVLQVLEKFHIP 335
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
+L++ +++H YV+ + PL + L++MY +CG++ +A
Sbjct: 336 TK------------------SLEEAKVVHRYVLQHLSPLKVSTCNGLLEMYFQCGSVDDA 377
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+ VF++ M D+ MI A +G ++S+DLF++ G+KPD ++ + AC+
Sbjct: 378 VSVFKN--MIDRDLTTIYIMIKQLAKNGFAEDSIDLFTQFKRSGLKPDGQMFIGVFGACS 435
Query: 257 HGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTASML 315
G + E F+ + ++ + P HY +VD++ G + EA +F+ ++P++P+ +
Sbjct: 436 MLGDIVEGMLHFESMSRDYEIVPTMAHYVSVVDMIGSIGNLDEALEFIEKMPMEPSVEVW 495
Query: 316 GALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNV-YAIFRRWDKARSMREAMER 374
L+N C HG +L + + +L+P R S V + D ++ ++
Sbjct: 496 ETLMNSCRVHGNTELGDRCAELVEKLDP---SRLNEKSKVCLLLIETSDITKNKKQ---- 548
Query: 375 MGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK------------HI 422
K P + V +H + A D S P + IY +L + QMK H
Sbjct: 549 ---NKPPDNNPVGNMNRIHEYRAGDTSLPENNMIYALLRRLRVQMKEAGYIAETRFCLHD 605
Query: 423 VDYENQE 429
VD E++E
Sbjct: 606 VDQEDKE 612
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 5/155 (3%)
Query: 72 PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
P+K + + N +L+ Y +CG + A VF M ++D+ + +I + G ++++ +F
Sbjct: 355 PLK-VSTCNGLLEMYFQCGSVDDAVSVFKNMIDRDLTTIYIMIKQLAKNGFAEDSIDLFT 413
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI--DNELPLTLVLRTSLVDMYAK 189
+ + SG KP+ + V AC+ LG + +G M+H + D E+ T+ S+VDM
Sbjct: 414 QFKRSGLKPDGQMFIGVFGACSMLGDIVEG-MLHFESMSRDYEIVPTMAHYVSVVDMIGS 472
Query: 190 CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
G + EAL M+PS V +W +++ HG
Sbjct: 473 IGNLDEALEFIEKMPMEPS-VEVWETLMNSCRVHG 506
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 64/120 (53%), Gaps = 3/120 (2%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+D + ++G+ +A+AV +E+ + + ++ C L++ +++H YV+ +
Sbjct: 210 LDEFCKEGEVKKAIAVLQELEKLHTYVDLYLCLRLMQLCGKAEFLEEAKVVHRYVLQHLS 269
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
PLT+ +++MY +CG++ +A++VFR+ M + + G VKE++D+
Sbjct: 270 PLTVRTCIRILEMYFQCGSVDDAVNVFRNMNMTERKLI---EELDSSCMEGEVKEAIDVL 326
>IMGA|Medtr2g120580.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 28402943-28399332 E
EGN_Mt090430 20090702
Length = 280
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 110/207 (53%), Gaps = 4/207 (1%)
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
++L+DMY+K G I EA V K + +W SMI G+A G ++L+LF +
Sbjct: 11 SALIDMYSKGGDIDEAQCVLDQTSKK--NTVLWTSMIMGYAQCGRGLDALELFDYLLTKK 68
Query: 241 -VKPDEITYLNLLSACAHGGLV-KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
+ PD + + L+AC H G + K YF + K G++P + YAC++D+ AR G + +
Sbjct: 69 ELIPDHVCFTAFLTACNHAGFINKGEEYFNKMITKYGLSPDIDIYACLIDLYARNGNLRK 128
Query: 299 AYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAI 358
A + ++P P + + L+ C +G ++L +LI++EP Y+ L+++Y
Sbjct: 129 ATDLMEEMPYDPNCIIWSSFLSACKIYGDVELGREAANQLIKMEPCNAAPYLTLAHIYTT 188
Query: 359 FRRWDKARSMREAMERMGVKKSPGYSF 385
W+KA +R M++ +K G+S
Sbjct: 189 KGLWNKASEVRSLMQQRVKRKPAGWSL 215
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 100/230 (43%), Gaps = 41/230 (17%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF 99
G E + +V+++LI MYS DI A+ V D KN V W SM+ GYA+CG A ++F
Sbjct: 2 GSERNVYVASALIDMYSKGGDIDEAQCVLDQTSKKNTVLWTSMIMGYAQCGRGLDALELF 61
Query: 100 D-LMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL 158
D L+ +++++ P+ V + L AC H G +
Sbjct: 62 DYLLTKKELI-------------------------------PDHVCFTAFLTACNHAGFI 90
Query: 159 DKGRMMHHYVIDN-ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMI 217
+KG + +I L + + L+D+YA+ G +++A + P + IW+S +
Sbjct: 91 NKGEEYFNKMITKYGLSPDIDIYACLIDLYARNGNLRKATDLMEEMPYDP-NCIIWSSFL 149
Query: 218 GGFACHG---LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+G L +E+ + +M P YL L GL +A
Sbjct: 150 SACKIYGDVELGREAANQLIKMEPCNAAP----YLTLAHIYTTKGLWNKA 195
>IMGA|Medtr4g114870.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 26415560-26417855 E
EGN_Mt090430 20090702
Length = 586
Score = 111 bits (278), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 117/256 (45%), Gaps = 33/256 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G FP+ T KA + G +HG I K +SD F+ SLI MY+ +
Sbjct: 342 MLVDGFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGE 401
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
I +++KVFD + V+N +W S++ GYA R
Sbjct: 402 IVSSKKVFDRMKVRNTATWTSIISGYA-------------------------------RN 430
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G +EAL F M+ N+ T+V V+ AC + A GR +H I + + + +
Sbjct: 431 GFGEEALNFFRLMKRKKVYVNKSTLVCVMTACGTIKASLIGREVHAQKIKSVILTNMYIE 490
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T+LV Y +C A +V + ++ DV W ++I G A GL E+L+ EM G
Sbjct: 491 TTLVWFYCRCKDYSHAFNVLKYIPLR--DVVSWTAIISGCARLGLETEALEFLREMMEEG 548
Query: 241 VKPDEITYLNLLSACA 256
V P+ TY + L ACA
Sbjct: 549 VLPNSYTYSSALKACA 564
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 19/275 (6%)
Query: 74 KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM 133
+NL+ +++++ Y+KCG IS A + FD M ++DV+ W+ +I + G EAL + +M
Sbjct: 283 RNLIVDSAVVNFYSKCGKISSAFRTFDRMAKRDVVCWTTIITACSQHGLGHEALLLLSQM 342
Query: 134 RVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
V G PNE T+ + L AC A G +H ++ + + TSL+DMYAKCG I
Sbjct: 343 LVDGFFPNEYTICAALKACGENKAFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEI 402
Query: 194 QEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLS 253
+ VF MK + W S+I G+A +G +E+L+ F M V ++ T + +++
Sbjct: 403 VSSKKVFDR--MKVRNTATWTSIISGYARNGFGEEALNFFRLMKRKKVYVNKSTLVCVMT 460
Query: 254 ACAHGGLVKEAWYFFDCLGKNGMTPKSEHY--------ACMVDVMARAGQVAEAYQFLCQ 305
AC G +K + +G+ K + +V R + A+ L
Sbjct: 461 AC---GTIKASL-----IGREVHAQKIKSVILTNMYIETTLVWFYCRCKDYSHAFNVLKY 512
Query: 306 IPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
IP++ S A+++GC G A R+++E
Sbjct: 513 IPLRDVVSWT-AIISGCARLGLETEALEFLREMME 546
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 113/234 (48%), Gaps = 3/234 (1%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N+++ Y + G ++ AR+VFD M ++ ++W+ +IDGY++ DEA +F G +
Sbjct: 189 NNLICSYLRLGKLAQARKVFDGMSRRNTVTWTAIIDGYLKYDLDDEAFKLFHGSIKHGVQ 248
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
PN V + C L G+ +H ++ + L++ +++V+ Y+KCG I A
Sbjct: 249 PNSKMFVCFMNLCCKRVDLALGKQIHARILKSNWR-NLIVDSAVVNFYSKCGKISSAFRT 307
Query: 200 FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
F M DV W ++I + HGL E+L L S+M + G P+E T L AC
Sbjct: 308 FDR--MAKRDVVCWTTIITACSQHGLGHEALLLLSQMLVDGFFPNEYTICAALKACGENK 365
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQPTAS 313
K + K ++D+ A+ G++ + + ++ ++ TA+
Sbjct: 366 AFKCGTQLHGAIVKKICKSDVFIGTSLIDMYAKCGEIVSSKKVFDRMKVRNTAT 419
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 37/72 (51%)
Query: 86 YAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
Y +C D S A V +P +DV+SW+ +I G R G EAL EM G PN T
Sbjct: 497 YCRCKDYSHAFNVLKYIPLRDVVSWTAIISGCARLGLETEALEFLREMMEEGVLPNSYTY 556
Query: 146 VSVLCACAHLGA 157
S L ACA L A
Sbjct: 557 SSALKACAKLEA 568
>IMGA|Medtr2g026940.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 7426332-7424129 E
EGN_Mt090430 20090702
Length = 466
Score = 108 bits (271), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 151/328 (46%), Gaps = 42/328 (12%)
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+D + R G EA+ +++ + + ++ C +L++ R++H + + +
Sbjct: 104 LDSFCRDGKVKEAVENLQKLEKLHIHVDLQRCLQLMRICGKAKSLEEARVVHRHALQHLH 163
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
PLT+ +++MY +CG++ +A+ VF+S M D+ W++MI +G ++S+D+F
Sbjct: 164 PLTVSTDNRVLEMYFECGSLDDAIDVFKS--MPEYDLTTWHTMIMQLVKNGFAEDSIDIF 221
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN-GMTPKSEHYACMVDVMAR 292
++ +G+KPD ++ + AC+ G + E F+ + K+ G+ P HY +V+++A
Sbjct: 222 TQFKNMGLKPDGQMFIGVFGACSMLGDISEGMLHFESMSKDYGIVPTMAHYVSLVEMIAS 281
Query: 293 AGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGL 352
G + EA +F+ ++P++P L C+N E + G +G
Sbjct: 282 IGHLDEALEFIEKMPMEPNVEKLDP---SCLN-----------------EKAKAGLLLG- 320
Query: 353 SNVYAIFRRWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMML 412
+ + +++ + G S V H F D S P S++IY +L
Sbjct: 321 ----------ENSDLIKKNEQNKLTINPKGQSRV------HEFRNGDTSDPKSDKIYTLL 364
Query: 413 GFIVSQMKHIVDYENQEYYFY--DNEGK 438
+ QMK Y + D EGK
Sbjct: 365 RGLREQMKEDGYIAETRYALHDIDEEGK 392
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 69/131 (52%), Gaps = 3/131 (2%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +L+ Y +CG + A VF MPE D+ +W +I V+ G ++++ +F + + G K
Sbjct: 171 NRVLEMYFECGSLDDAIDVFKSMPEYDLTTWHTMIMQLVKNGFAEDSIDIFTQFKNMGLK 230
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL--TLVLRTSLVDMYAKCGAIQEAL 197
P+ + V AC+ LG + +G M+H + + + T+ SLV+M A G + EAL
Sbjct: 231 PDGQMFIGVFGACSMLGDISEG-MLHFESMSKDYGIVPTMAHYVSLVEMIASIGHLDEAL 289
Query: 198 HVFRSGLMKPS 208
M+P+
Sbjct: 290 EFIEKMPMEPN 300
>IMGA|Medtr5g102690.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 41118954-41116107 E
EGN_Mt090430 20090702
Length = 906
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 134/285 (47%), Gaps = 10/285 (3%)
Query: 25 KRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWN 80
++E G I+ + G D + NS + ++ R +F+ I + LV S++
Sbjct: 532 RKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYS 591
Query: 81 SMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVS 136
++ G K G ++F M EQ DVL+++ +IDG+ + G D+A + EEM+
Sbjct: 592 ILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTK 651
Query: 137 GPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA 196
G +P VT SV+ A + LD+ M+ + L +V+ +SL+D + K G I EA
Sbjct: 652 GLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEA 711
Query: 197 LHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
+ + K + + WN ++ + E+ F M + P+ +TY +++
Sbjct: 712 YLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMING 771
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+A+ F+ + K G+ P + Y M+ +A+AG V EA
Sbjct: 772 LCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEA 816
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 173/393 (44%), Gaps = 18/393 (4%)
Query: 2 LRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDI 61
+R P+ T+ L + E L + + +AG + N +I + +
Sbjct: 404 MRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKL 463
Query: 62 PNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQD----VLSWSCL 113
A +F G+ K + ++ S++DG + G + A +++ M + D V+ ++ L
Sbjct: 464 DEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSL 523
Query: 114 IDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL 173
I + + G ++ +++EM G P+ + + S + G ++KGR + + L
Sbjct: 524 IQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGL 583
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS----DVFIWNSMIGGFACHGLVKES 229
+ + L+ K G +E +F MK DV +N++I GF G V ++
Sbjct: 584 VPDVRSYSILIHGLVKAGFSRETYKLFYE--MKEQGLHLDVLAYNTVIDGFCKSGKVDKA 641
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
L EM G++P +TY +++ A + EA+ F+ G+ Y+ ++D
Sbjct: 642 YQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDG 701
Query: 290 MARAGQVAEAY---QFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD 346
+ G++ EAY + L Q + P + LL+ + ++D A+ + + L+ +
Sbjct: 702 FGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPN 761
Query: 347 G-RYVGLSNVYAIFRRWDKARSMREAMERMGVK 378
Y + N + R+++KA + M++ G+K
Sbjct: 762 AMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLK 794
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 135/316 (42%), Gaps = 22/316 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N+ + +++ +A+ G I A + D M D++ ++ ID + + G D A F
Sbjct: 237 NVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFF 296
Query: 131 EEMRVSGPKPNEV---TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
EM+ G P++V T++ VLC L + + ++ +P T ++ Y
Sbjct: 297 HEMKAQGLVPDDVTYTTLIGVLCKARRLD--EAVELFEELDLNRSVPCVYAYNTMIMG-Y 353
Query: 188 AKCGAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
G EA + R G + PS V +N ++ G V+E+L + EM P
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCI-PS-VIAYNCILTCLGRKGKVEEALRIHDEMR-QDAAP 410
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ TY L+ G ++ A D + + G+ P M+D + +A ++ EA
Sbjct: 411 NLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIF 470
Query: 304 CQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE--PHQDGRYVGLSNVYAI 358
+ P + +L++G G++D A ++ K+++ + P+ + N +
Sbjct: 471 LGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKC 530
Query: 359 FRRWDKARSMREAMER 374
R+ D + +E + R
Sbjct: 531 GRKEDGHKIYKEMVHR 546
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 91/198 (45%), Gaps = 10/198 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVF 130
N+V ++S++DG+ K G I A + + + ++ + +W+CL+D V+ + DEA F
Sbjct: 691 NVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCF 750
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+ M+ PN +T ++ + +K + + L + T+++ AK
Sbjct: 751 QNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKA 810
Query: 191 GAIQEALHVFRSGLMKPS----DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G + EA +F K S D +N+MI G + ++ +F E + G + +
Sbjct: 811 GNVMEARGLFDR--FKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSK 868
Query: 247 TYLNLLSACAHGGLVKEA 264
T + LL A +++A
Sbjct: 869 TCVVLLDALHKADCLEQA 886
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 99/213 (46%), Gaps = 5/213 (2%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+++ Q+ ++ E +V ++ L+ + R+G D AL++ +EM+ S ++ + +V
Sbjct: 223 LTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAALSLLDEMK-SNSFTADLVLYNVCID 281
Query: 152 C-AHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD- 209
C +G +D H + L V T+L+ + K + EA+ +F + S
Sbjct: 282 CFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVP 341
Query: 210 -VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
V+ +N+MI G+ G E+ L G P I Y +L+ G V+EA
Sbjct: 342 CVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIH 401
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ 301
D + ++ P Y ++D++ +AG++ A +
Sbjct: 402 DEMRQDA-APNLTTYNILIDMLCKAGELEAALK 433
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 82/195 (42%), Gaps = 6/195 (3%)
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L+ +V+ EA V E MR +P +++ A + D + H + +
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK----PSDVFIWNSMIGGFACHGLVKE 228
+ L T+LV ++A+ G I AL + MK +D+ ++N I F G V
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDE--MKSNSFTADLVLYNVCIDCFGKVGKVDM 291
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+ F EM G+ PD++TY L+ + EA F+ L N P Y M+
Sbjct: 292 AWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIM 351
Query: 289 VMARAGQVAEAYQFL 303
AG+ EAY L
Sbjct: 352 GYGSAGKFDEAYSLL 366
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/287 (21%), Positives = 115/287 (40%), Gaps = 14/287 (4%)
Query: 90 GDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
G I M R+ F P +++ LI D L +F +M+ G + N +++
Sbjct: 189 GVIEMMRK-FKFRPA--FSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLV 245
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA---LHVFRSGLMK 206
A G +D + + N LVL +D + K G + A H ++ +
Sbjct: 246 RVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLV 305
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
P DV + ++IG + E+++LF E+ + P Y ++ G EA+
Sbjct: 306 PDDV-TYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYS 364
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI--PIQPTASMLGALLNGCMN 324
+ + G P Y C++ + R G+V EA + ++ P + L++
Sbjct: 365 LLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPNLTTYNILIDMLCK 424
Query: 325 HGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA 371
G+L+ A V + E G + + V + R KA+ + EA
Sbjct: 425 AGELEAALKVQDTMKEA-----GLFPNIMTVNIMIDRLCKAQKLDEA 466
>IMGA|Medtr2g006720.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 792744-794494 H
EGN_Mt090430 20090702
Length = 507
Score = 106 bits (264), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 123/260 (47%), Gaps = 37/260 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ P+ +T L A+A L+ + G A+HGY + R
Sbjct: 23 MQQQGLLPNQVTLVSLMDAAAKLVALQEGRAVHGYAVR--------------------RG 62
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKC-GDISMARQVF---DLMPEQDVLSWSCLIDG 116
I VF+ ++LD Y KC G + +A VF D V SW+ LI G
Sbjct: 63 IGLGDDVFE----------TTLLDMYHKCAGCVGLAASVFAKMDARKRTKVGSWNTLIAG 112
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y+R G EA +F M P+ +T+ +V+ C L L +G+ +H Y+I + L
Sbjct: 113 YLRNGQALEAFELFRRMMCRNILPDLLTLANVIFCCVELNYLHRGKSIHGYMIMMGVELD 172
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
LV T+LVD+Y K + + R ++ D ++N M+ G+ + L E+L++F EM
Sbjct: 173 LVASTALVDLYCKIDVTKARMLFER---LENKDAVVYNVMMSGYLENNLPAEALNVFCEM 229
Query: 237 HIVGVKPDEITYLNLLSACA 256
+ V P+ ++NL+SA +
Sbjct: 230 VKMNVSPNVALFINLISAVS 249
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 97/229 (42%), Gaps = 34/229 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + PD LT + L G +IHGY+ G E D S +L+ +Y
Sbjct: 129 MMCRNILPDLLTLANVIFCCVELNYLHRGKSIHGYMIMMGVELDLVASTALVDLYCKI-- 186
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
D++ AR +F+ + +D + ++ ++ GY+
Sbjct: 187 ------------------------------DVTKARMLFERLENKDAVVYNVMMSGYLEN 216
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
EAL VF EM PN ++++ A + L + R +H YV+ + +++ +
Sbjct: 217 NLPAEALNVFCEMVKMNVSPNVALFINLISAVSKLRDIRLVRSIHGYVLKHMHNMSVEIA 276
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKES 229
+ YAKCG + + VF M+ D+ WNSMI G+ + + E+
Sbjct: 277 NQFIHAYAKCGYVVDEREVFNK--MRTMDLVSWNSMIMGYVHNDHIDEA 323
>IMGA|Medtr4g129600.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 30860314-30862451 E
EGN_Mt090430 20090702
Length = 565
Score = 104 bits (259), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 117/228 (51%), Gaps = 7/228 (3%)
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ ++G EAL + E+ G K + + C +++ + +H Y + +
Sbjct: 199 FCQEGKVKEALELMEK----GIKADANCFEILFDLCGKSKSVEDAKKVHDYFLQSTFRSD 254
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ +++MY C ++ +A VF M ++ W+ MI G+A + E L LF +M
Sbjct: 255 FKMHNKVIEMYGNCKSMTDARRVFDH--MPNRNMDSWHMMIRGYANSTMGDEGLQLFEQM 312
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL-GKNGMTPKSEHYACMVDVMARAGQ 295
+ +G++ T L +LSAC V++A+ + + + K G+ P EHY ++DV+ ++G
Sbjct: 313 NELGLEITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYMGLLDVLGQSGY 372
Query: 296 VAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
+ EA +F+ Q+P +PT ++ L N HG +DL + V ++ L+P
Sbjct: 373 LKEAEEFIEQLPFEPTVTVFETLKNYARIHGDVDLEDHVEELIVSLDP 420
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 80/169 (47%), Gaps = 12/169 (7%)
Query: 80 NSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
N +++ Y C ++ AR+VFD MP +++ SW +I GY DE L +FE+M G +
Sbjct: 259 NKVIEMYGNCKSMTDARRVFDHMPNRNMDSWHMMIRGYANSTMGDEGLQLFEQMNELGLE 318
Query: 140 PNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQ 194
TM++VL AC A++ M Y I+ + + L+D+ + G ++
Sbjct: 319 ITSETMLAVLSACGSAEAVEDAYIYLESMKSKYGIEPGVEHYM----GLLDVLGQSGYLK 374
Query: 195 EALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
EA +P+ V ++ ++ HG V L+ E IV + P
Sbjct: 375 EAEEFIEQLPFEPT-VTVFETLKNYARIHGDV--DLEDHVEELIVSLDP 420
>IMGA|Medtr2g056710.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 15560551-15566188 H
EGN_Mt090430 20090702
Length = 897
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 141/304 (46%), Gaps = 19/304 (6%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMARQV 98
D V L+ Y + +A ++ D G+ V N+V N+++ GY K G + A +V
Sbjct: 331 DERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKV-NMVICNTLIKGYCKLGQVCEAERV 389
Query: 99 F----DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAH 154
F D + D S++ L+DGY R+G +A + EEM G P VT +V+
Sbjct: 390 FVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVD 449
Query: 155 LGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDV 210
+G+ D + H +++ + + +++D + K G A+ +++ G K +
Sbjct: 450 VGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVA 509
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDC 270
F N+MI G G + E+ +F M +G+ PDEITY L G V+EA+
Sbjct: 510 F--NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGV 567
Query: 271 LGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGK 327
+ + M+ E Y ++D + + ++ + L ++ + P G L++G + K
Sbjct: 568 MERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQK 627
Query: 328 LDLA 331
LD A
Sbjct: 628 LDKA 631
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/388 (20%), Positives = 149/388 (38%), Gaps = 48/388 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV P+ ++ + + + + + I G+ N++I
Sbjct: 463 MVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGK 522
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A VFD + L +++ ++ DGY K G++ A Q+ +M Q + ++
Sbjct: 523 LMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNS 582
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LIDG + ++ + EM+ G PN VT +++ LDK ++ +I+
Sbjct: 583 LIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERG 642
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---------------------------- 204
+V+ + +V + I EA + L
Sbjct: 643 FTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIA 702
Query: 205 --MKPSDV-------FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
+ SD+ ++N I G G + E+ + S + G PD TY L+ AC
Sbjct: 703 DSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHAC 762
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQIPIQPTA 312
+ G V EA+ D + + G+ P Y +++ + + G + A + L Q + P A
Sbjct: 763 SVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNA 822
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIE 340
L+ G LD A + K+ E
Sbjct: 823 VTYNILIGCYCRIGDLDKASRLREKMTE 850
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 155/377 (41%), Gaps = 57/377 (15%)
Query: 67 VFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYV 118
VFD I V ++ + +++ + + G + +A +V + M E +V++++ L++GYV
Sbjct: 213 VFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYV 272
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK------------------ 160
+GD++ V M G N VT ++ G +D+
Sbjct: 273 GRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDE 332
Query: 161 -------------GRMMHHYVIDNE-----LPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
GRM I +E L + +V+ +L+ Y K G + EA VF
Sbjct: 333 RVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVG 392
Query: 203 GL---MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGG 259
+ +KP D + +N+++ G+ G V ++ L EM G+ P +TY ++ G
Sbjct: 393 MVDWNLKP-DCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVG 451
Query: 260 LVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLG 316
+A + + + + G+TP M+D + G A +I +
Sbjct: 452 SYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFN 511
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMREAMERM 375
+++G GKL A V ++ EL D Y LS+ Y +A ++ MER
Sbjct: 512 TMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQ 571
Query: 376 GVKKSPGYSFVEMHGAL 392
+ S +EM+ +L
Sbjct: 572 AMSAS-----IEMYNSL 583
>IMGA|Medtr3g080270.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 18833474-18831303 E
EGN_Mt090430 20090702
Length = 512
Score = 102 bits (255), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/379 (24%), Positives = 158/379 (41%), Gaps = 50/379 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ + +T L + L L ++ I K GYE D +LI DI A
Sbjct: 99 GIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKA 158
Query: 65 RKVFDGIPVK----NLVSWNSMLDGYAKCGD----ISMARQVFDLMPEQDVLSWSCLIDG 116
D + N VS+ ++++G K G + M R++ + DV+ ++ +IDG
Sbjct: 159 LHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDG 218
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DKGRMMHHYVIDNELPL 175
+ ++A + EM P VT +++C +G L D ++H +++N P
Sbjct: 219 VCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINP- 277
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPS------------------------ 208
T+ + LVD + K G ++EA +VF + +KP+
Sbjct: 278 TVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIF 337
Query: 209 ----------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
DV ++ MI GF +V E++ LF EMH + PD +TY +L+
Sbjct: 338 NTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKS 397
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASML 315
G + A + G P Y ++D + + V +A + L ++ IQP+
Sbjct: 398 GRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTY 457
Query: 316 GALLNGCMNHGKLDLAETV 334
L+NG G+L A+ V
Sbjct: 458 NILINGLCKSGRLKDAQKV 476
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 100/234 (42%), Gaps = 45/234 (19%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWSCLIDGYVRKGDYDEALAVF 130
N+V++NS+++GY +++ A +F+ M + DV S+S +I G+ + DEA+ +F
Sbjct: 313 NIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLF 372
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EEM P+ VT SL+D K
Sbjct: 373 EEMHCKQIFPDVVT-----------------------------------YNSLIDGLCKS 397
Query: 191 GAIQEALHVFRSGLM----KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G I AL + G M +P ++ +NS++ + V ++++L +++ ++P
Sbjct: 398 GRISYALKLI--GEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVC 455
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
TY L++ G +K+A F+ + NG Y M+ + G V +
Sbjct: 456 TYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFVIPQF 509
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/236 (24%), Positives = 107/236 (45%), Gaps = 10/236 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + P TF L A K + + + K + + NSL++ Y +
Sbjct: 270 MILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNE 329
Query: 61 IPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A +F+ + ++ S++ M+ G+ K + A ++F+ M + DV++++
Sbjct: 330 VNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNS 389
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LIDG + G AL + EM G PN +T S+L A +DK + + D+
Sbjct: 390 LIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHN 449
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLV 226
+ ++ L++ K G +++A VF L+ DV+ +N+MI GF G V
Sbjct: 450 IQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKGFV 505
>IMGA|Medtr6g093250.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 19939706-19941224 E
EGN_Mt090430 20090702
Length = 446
Score = 102 bits (254), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 119/227 (52%), Gaps = 6/227 (2%)
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
++++G+ ++ L E+ G + +S+L C L +L+ G+ +H ++ ++
Sbjct: 78 FLQEGNVNQVL----ELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ L L+ +Y KCG++++A VF M +V N MIGG+ +GL + L +F +M
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDK--MPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQM 191
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
GV PDE T+ +L+ CA V+E F+ + + G+ P EHY +V++ AG++
Sbjct: 192 RQQGVVPDEETFALVLAVCALVDGVEEGLMQFESMKEYGIVPGMEHYLGVVNIFGCAGRL 251
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEP 343
EA++F+ +PI+ + L N HG L+ + L L+P
Sbjct: 252 DEAHEFIENMPIEAGVELWETLRNFARIHGDLEREDCADELLTVLDP 298
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 95/220 (43%), Gaps = 32/220 (14%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G F D+ F L K L ELG +H ++ ++ + + + N LI +Y
Sbjct: 94 GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLY--------- 144
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCG + AR+VFD MP+++V S + +I GY G
Sbjct: 145 ----------------------VKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGI 182
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ L VF++MR G P+E T VL CA + +++G M + + + + +V
Sbjct: 183 DGLLVFKQMRQQGVVPDEETFALVLAVCALVDGVEEGLMQFESMKEYGIVPGMEHYLGVV 242
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHG 224
+++ G + EA H F + + V +W ++ HG
Sbjct: 243 NIFGCAGRLDEA-HEFIENMPIEAGVELWETLRNFARIHG 281
>IMGA|Medtr5g085730.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 32767077-32765258 E
EGN_Mt090430 20090702
Length = 593
Score = 101 bits (252), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/349 (25%), Positives = 155/349 (44%), Gaps = 61/349 (17%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMA 95
GY + ++ N L+H + D+ NAR VFD I + L VS+N+++ GY + ++
Sbjct: 221 GYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSFNTLISGYCRSKNVEEG 280
Query: 96 RQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ +M + DV ++S LI+G ++ +EA +F+EM G PN VT
Sbjct: 281 FVLKSVMESERISPDVFTYSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTF------ 334
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPS 208
T+L+D K G I AL F + ++P
Sbjct: 335 -----------------------------TTLIDGQCKHGKIDLALRNFEIMKDRGIRP- 364
Query: 209 DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
D+ +N++I G G +KE+ L +EM G KPD+IT+ L+ C G + A
Sbjct: 365 DLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIK 424
Query: 269 DCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI------PIQPTASMLGALLNGC 322
D + + G+ + ++ + R G+V +A + L + P PT +M +++
Sbjct: 425 DRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTM---VIDCF 481
Query: 323 MNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREA 371
G + + G KL++ E +DGR G+ A+ + K M+ A
Sbjct: 482 CKKGDVKM----GAKLLK-EMQRDGRVPGVVTYNALMNGFCKQGQMKNA 525
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/298 (20%), Positives = 120/298 (40%), Gaps = 44/298 (14%)
Query: 97 QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
+V D +V ++ L+ G+ + GD A VF+E+ G +P+ V+
Sbjct: 216 EVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVFDEISRRGLRPSVVSF----------- 264
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL---HVFRSGLMKPSDVFIW 213
+L+ Y + ++E V S + P DVF +
Sbjct: 265 ------------------------NTLISGYCRSKNVEEGFVLKSVMESERISP-DVFTY 299
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+++I G V+E+ LF EM +G+ P+ +T+ L+ G + A F+ +
Sbjct: 300 SALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKD 359
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDL 330
G+ P Y +++ + R G + EA + L ++ +P L++GC G +D
Sbjct: 360 RGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDS 419
Query: 331 AETVGRKLIE--LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
A + +++E +E +S + R D R +++ + P Y+ V
Sbjct: 420 ALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMV 477
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 111/238 (46%), Gaps = 18/238 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M +G+ P+ +TF L K +L L + G D N+LI+ D
Sbjct: 322 MCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDGD 381
Query: 61 IPNARKVFDGI------PVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSW 110
+ ARK+ + + P K +++ +++DG K GD+ A ++ D M E+ D +++
Sbjct: 382 LKEARKLLNEMIGNGFKPDK--ITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAF 439
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL-CACAHLGALDKGRMMHHYVI 169
+ LI G R G +A + ++M +G KP++ T V+ C C +++
Sbjct: 440 TALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQR 499
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEA---LHVFRSGLMKPSDVFIWNSMIGGFACHG 224
D +P +V +L++ + K G ++ A LH + + P+D+ +N ++ G HG
Sbjct: 500 DGRVP-GVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVVPNDI-TFNILLDGHCKHG 555
>IMGA|Medtr6g089550.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 18547420-18549099 E
EGN_Mt090430 20090702
Length = 559
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 127/260 (48%), Gaps = 14/260 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + P+ TF L + + + + K G + D F NSL+ Y ++
Sbjct: 273 MIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKE 332
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVF------DLMPEQDVLSW 110
+ A+ +F+ I + N+ S++ M+ G+ K + A +F +++P DV+++
Sbjct: 333 VNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIP--DVVTY 390
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LIDG + G AL + +EM G +++T S+L A +DK + + D
Sbjct: 391 NSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 450
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS--DVFIWNSMIGGFACHGLVKE 228
+ + T+LVD K G +++A VF L+K DV I+ +MI GF HGL E
Sbjct: 451 EGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDE 510
Query: 229 SLDLFSEMHIVGVKPDEITY 248
SLDL S+M G P+ +TY
Sbjct: 511 SLDLLSKMEENGCIPNAVTY 530
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 11/265 (4%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVF 130
++V++N+++ G+ G + A +F+ M +V +++ L+DG+ ++ EA V
Sbjct: 246 DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M G KP+ T S++ + ++K + + + + + + + ++ + K
Sbjct: 306 AMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKI 365
Query: 191 GAIQEALHVFRS---GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+ EA+++F+ + P DV +NS+I G G + +L L EMH GV D+IT
Sbjct: 366 KKVDEAMNLFKEMHCNNIIP-DVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKIT 424
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP 307
Y ++L A V +A + G+ P Y +VD + + G++ +A +
Sbjct: 425 YNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484
Query: 308 IQP---TASMLGALLNGCMNHGKLD 329
++ ++ A++ G +HG D
Sbjct: 485 VKGYILDVNIYTAMIQGFCSHGLFD 509
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/325 (22%), Positives = 140/325 (43%), Gaps = 21/325 (6%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYA 87
++ + G D N+LI + + +A +F+ + +N+ ++N ++DG+
Sbjct: 234 LYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFC 293
Query: 88 KCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN-- 141
K + A+ V +M +Q DV +++ L+D Y + ++A +F + G PN
Sbjct: 294 KERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIH 353
Query: 142 -EVTMVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
M+ C + A++ + MH +N +P +V SL+D K G I AL +
Sbjct: 354 SYSIMIHGFCKIKKVDEAMNLFKEMH---CNNIIP-DVVTYNSLIDGLCKLGKISYALKL 409
Query: 200 FRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+ P D +NS++ + V +++ L ++M G++PD TY L+
Sbjct: 410 VDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCK 469
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASM 314
G +++A F+ L G Y M+ G E+ L ++ P A
Sbjct: 470 NGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVT 529
Query: 315 LGALLNGCMNHGKLDLAETVGRKLI 339
++ + + D AE + R++I
Sbjct: 530 YEIIICSLFDKDENDKAEKLLREMI 554
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 2/214 (0%)
Query: 92 ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+S+ RQ+ D++ S LI+ + + G + +V ++ G +PN +T+ +++
Sbjct: 92 VSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKG 151
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR--SGLMKPSD 209
G + + H V+ L V +L++ K G AL + R G + +
Sbjct: 152 LCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 211
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V ++N++I LV E+ DL+SEM G+ PD +TY L+S G +K+A F+
Sbjct: 212 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFN 271
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ + P + +VD + ++ EA L
Sbjct: 272 KMIFENINPNVYTFNILVDGFCKERRLKEAKNVL 305
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
+ PD +T+ L L K L + + G D+ NS++ + A
Sbjct: 382 NIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 441
Query: 65 ----RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVF-DLMPE---QDVLSWSCLIDG 116
K+ D ++ ++ +++DG K G + AR VF DL+ + DV ++ +I G
Sbjct: 442 IALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQG 501
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ G +DE+L + +M +G PN VT ++C+
Sbjct: 502 FCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICS 536
>IMGA|Medtr5g097340.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 38794600-38796994 E
EGN_Mt090430 20090702
Length = 716
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 166/338 (49%), Gaps = 21/338 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITK---AGYESDRFVSNSLIHMYSS 57
ML+ GV PD ++F + + ELG A+ Y K G D + LI+ Y
Sbjct: 355 MLQRGVVPDLISFSSIVGVFS--RNGELGRAL-AYFEKMKGVGLVPDTVIYTILINGYCR 411
Query: 58 FRDIPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLS 109
D+ A K+ + + V ++V++N++L+G + + A ++F M E+ D +
Sbjct: 412 NDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYT 471
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
+ LI GY + G+ +AL++FE M + KP+ VT +++ +G ++K + + + +I
Sbjct: 472 LTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMI 531
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFIWNSMIGGFACHGLV 226
E+ + + + L++ + G + EA ++ + +KP+ V N++I G+ G +
Sbjct: 532 SREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLV-TCNTIIKGYLRAGNL 590
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
++ D + M GV PD ITY L+++ A++ + + + G+ P Y +
Sbjct: 591 SKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAI 650
Query: 287 VDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNG 321
+ +R G++ EA L ++ I P S +L+NG
Sbjct: 651 LGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLING 688
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 132/255 (51%), Gaps = 14/255 (5%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGD 91
+ + G D + +LIH Y ++ A +F+ + +++L V++N+++DG+ K G+
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519
Query: 92 ISMARQVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVS 147
+ A++++ M +++ +S+S LI+G+ G EA +++EM+ G KP VT +
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579
Query: 148 VLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----G 203
++ G L K + +I +P + +L++ + K A + + G
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERG 639
Query: 204 LMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKE 263
L+ ++ +N+++GGF+ HG ++E+ + +M G+ PD+ TY +L++ +KE
Sbjct: 640 LL--PNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKE 697
Query: 264 AWYFFDCLGKNGMTP 278
A+ D + + G P
Sbjct: 698 AFRVHDEMLQRGFVP 712
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 140/310 (45%), Gaps = 19/310 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVF 130
+LV++N++++ Y + G +S A + D M + + +++ LI+G ++G Y+ A V
Sbjct: 258 DLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVL 317
Query: 131 EEMRVSGPKPNEVTMVSVLC-ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
+EM G PN T +L +C + R+ + + +P L+ +S+V ++++
Sbjct: 318 DEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVP-DLISFSSIVGVFSR 376
Query: 190 CGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
G + AL F G+ D I+ +I G+ + V +L + +EM G D +T
Sbjct: 377 NGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVT 436
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLC 304
Y LL+ G ++ +A F + + G+ P ++ + G + +A ++ +
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 496
Query: 305 QIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQD--------GRYVGLSNVY 356
++P L++G G+++ A+ + +I E + L V
Sbjct: 497 LRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVS 556
Query: 357 AIFRRWDKAR 366
FR WD+ +
Sbjct: 557 EAFRLWDEMK 566
>IMGA|AC233662_58.1 Pentatricopeptide repeat AC233662.1
266570-264088 E EGN_Mt090430 20090702
Length = 718
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 144/311 (46%), Gaps = 14/311 (4%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD +TF L + L I ++ + G++ D + NSLI + A
Sbjct: 258 GFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKA 317
Query: 65 RKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDG 116
++ + ++ N V++N+++ K +I A + ++ + DV +++ LI G
Sbjct: 318 IEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQG 377
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ D A+ +FEEM+ G KP+E T ++ + + L + M+ + +
Sbjct: 378 LCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARN 437
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
V+ +L+D K I++A +F G+ + S +N++I G + V+E+ L
Sbjct: 438 AVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSS--VTYNTLIDGLCKNKRVEEASQL 495
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
+M + G+KPD+ TY +LL+ G +++A + NG P Y ++ + R
Sbjct: 496 MDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCR 555
Query: 293 AGQVAEAYQFL 303
AG+V A + L
Sbjct: 556 AGRVDVASKLL 566
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 85/374 (22%), Positives = 158/374 (42%), Gaps = 32/374 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ PD TF L + +++ + + + G + D F + LI R + A
Sbjct: 363 GLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEA 422
Query: 65 RKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDG 116
+ + +N V +N+++DG K I A ++FD M + ++++ LIDG
Sbjct: 423 LMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDG 482
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ +EA + ++M + G KP++ T S+L +G ++K + + N
Sbjct: 483 LCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPD 542
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVF--IWNSMIGGFACHGLVKESLDLFS 234
+ +L+ + G + A + RS MK + +N +I KE + LF
Sbjct: 543 IFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFR 602
Query: 235 EMHIVGVKPDEITY-LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
EM PD +T+ + C GG ++EA F + + G+ P+ +
Sbjct: 603 EMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSF---------- 652
Query: 294 GQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAET-VGRKLIELEPHQDGRYVGL 352
G +AE LC + ++ T L L+N M ++ ET + R +++ D L
Sbjct: 653 GFLAEG---LCSLSMEDT---LIELINMVMEKAQMSERETSMIRGFLKIRKFND----AL 702
Query: 353 SNVYAIFRRWDKAR 366
+N+ I R + R
Sbjct: 703 ANLGGILDRQNPKR 716
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/298 (22%), Positives = 126/298 (42%), Gaps = 21/298 (7%)
Query: 50 SLIHMYSSFRDIPNARKVFDG----IPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ 105
+LI +++F +I N K+ + P N +N L+ + + + + M +
Sbjct: 95 TLIQSFTNFHEIENLLKILENELGFKPDTNF--YNIALNALVEDNKLKLVEMLHSKMVNE 152
Query: 106 ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
DV +++ LI + A+ + EEM G KP+E+T +++ G L+
Sbjct: 153 GIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGA 212
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEA----LHVFRSGLMKPSDVFIWNSMI 217
M ++ LT V LV+ + K G ++EA L V G D +NS++
Sbjct: 213 LKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGF--SPDQVTFNSLV 270
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
GF G V ++LD+ M G PD TY +L+S G ++A + +
Sbjct: 271 NGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECS 330
Query: 278 PKSEHYACMVDVMARAGQVAEAY---QFLCQIPIQPTASMLGALLNG-CMNHGKLDLA 331
P + Y ++ + + ++ A + L + P L+ G C++ + D+A
Sbjct: 331 PNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ-DIA 387
>IMGA|Medtr4g089910.1 TonB box, N-terminal
chr04_pseudomolecule_IMGAG_V3 18863269-18865905 E
EGN_Mt090430 20090702
Length = 555
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 156/357 (43%), Gaps = 23/357 (6%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
+L+ G PD +TF L K LK E+ L H + G++ D+ +LI+
Sbjct: 119 ILKKGYHPDAVTFTILIKGLC--LKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRV 176
Query: 59 RDIPNARKVF---DGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-------DV 107
+ A ++ DG V+ N+V +++++D + C D + FDL E DV
Sbjct: 177 GETKAAVQLLRRVDGKLVRPNVVMYSTIID--SMCKD-KLVNDAFDLYCEMVSKRISPDV 233
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
+++S LI G+ G A+ +F M PN T ++ G + + + +
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGL 225
++ + L +V SL+D Y + +A +F + DV+ ++ MI GF +
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
V E++ LF EMH + P+ +TY +L+ G A D + G Y
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNS 413
Query: 286 MVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
++D + + V +A L +I IQP L+NG G+LD A+ V L+
Sbjct: 414 ILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLL 470
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 145/352 (41%), Gaps = 48/352 (13%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + PD +T+ L + K + + + + + + + LI +
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A+ V + KN+ V++NS++DGY ++ A+ +F++M ++ DV S+S
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+I+G+ + DEA+ +FEEM PN VT
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTY--------------------------- 376
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESL 230
SLVD K G AL + +PS++ +NS++ + V +++
Sbjct: 377 --------NSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
L +++ G++PD TY L++ G + +A F+ L G +P Y +++
Sbjct: 429 VLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGF 488
Query: 291 ARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLI 339
G E L ++ P A L++ + D AE + R++I
Sbjct: 489 CNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMI 540
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 120/275 (43%), Gaps = 35/275 (12%)
Query: 106 DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMH 165
D ++ + L++ + + G + +VF ++ G P+ VT ++ G + K H
Sbjct: 92 DFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFH 151
Query: 166 HYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR---SGLMKPSDVFIWNSMIGGFAC 222
V+ L V +L++ + G + A+ + R L++P +V +++++I
Sbjct: 152 DKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRP-NVVMYSTIIDSMCK 210
Query: 223 HGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEH 282
LV ++ DL+ EM + PD +TY +L+S G +K A F+ + + + P
Sbjct: 211 DKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYT 270
Query: 283 YACMVDVMARAGQVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELE 342
++ ++D + G+V EA L A M+ + KLD+
Sbjct: 271 FSILIDGFCKEGKVREAKNVL--------AVMMK-------KNVKLDVVT---------- 305
Query: 343 PHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGV 377
Y L + Y + ++ +KA+S+ M + GV
Sbjct: 306 ------YNSLMDGYCLVKQVNKAKSLFNVMAQRGV 334
>IMGA|Medtr6g083620.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 17094574-17092109 E
EGN_Mt090430 20090702
Length = 516
Score = 94.7 bits (234), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/347 (23%), Positives = 154/347 (44%), Gaps = 17/347 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L++G P+ +T L K K L H + G+ ++ +LI+ +
Sbjct: 124 ILKLGFQPNTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLNQVSYGTLINGLCKTGE 183
Query: 61 IPNARKVF---DGIPVK-NLVSWNSMLDGYAK------CGDISMARQVFDLMPEQDVLSW 110
A +V DG+ V+ N+V +N+++D K D+ V + P DV+++
Sbjct: 184 TRAALQVLRRIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFP--DVVTY 241
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LI G+ G + EA+ + +M + P+ T +++ G + + R + +I
Sbjct: 242 TTLIYGFCIVGQFKEAVRLLNQMLLKNISPDVQTFNTLVDGLCKEGEIKQARNVLAVMIK 301
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKE 228
+ +V TSL+D + A +VF + + ++ ++ MI G + +V E
Sbjct: 302 QGVEPNVVTYTSLMDGCFLVKEVNRATYVFNTMAQRGVAPNLHSYSVMITGLCKNKMVDE 361
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+++LF E+HI + PD I Y +L+ G + + W D + G Y ++D
Sbjct: 362 AVNLFKELHIRNMAPDIIVYSSLIDGLCKSGRISDVWDLIDEMHNRGQPADVITYNSLLD 421
Query: 289 VMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAE 332
+ + QV +A L +I IQP L++G +G+ A+
Sbjct: 422 ALFKNHQVDKAITLLMKIKDQGIQPNMYTYTILVDGLCKNGRFKHAQ 468
>IMGA|Medtr6g086130.1 Protein of unknown function DUF19
chr06_pseudomolecule_IMGAG_V3 17493692-17492368 E
EGN_Mt090430 20090702
Length = 420
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/365 (21%), Positives = 152/365 (41%), Gaps = 32/365 (8%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D + L + L + ++ I K GY+ D +L+ ++ A
Sbjct: 5 GIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNEVKKA 64
Query: 65 RKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQ--------------- 105
D + K VS+ ++++G K G+ A + + ++
Sbjct: 65 LHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAALSCLERLKDKLVVDAYDLYCEMVVK 124
Query: 106 ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
DV++++ LI G+ G ++A+ +F EMR+ PN + ++ G + G
Sbjct: 125 RIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGG 184
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI----WNSMI 217
+ + +I + +V +SL+D Y +A ++F + M + V I +N MI
Sbjct: 185 KSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNA--MAQNGVTIDLRSYNIMI 242
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G + +V E++ LF EM + PD ITY L+ G + W D + G +
Sbjct: 243 NGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRS 302
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
Y+ +++V+ ++G A + +I +P L++G +G+L A+ +
Sbjct: 303 ANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEI 362
Query: 335 GRKLI 339
L+
Sbjct: 363 FHDLL 367
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 24/274 (8%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVF 99
D N+LI+ + + +A ++F+ + +KN+V S+N ++DG K GD+ + V
Sbjct: 129 DVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVL 188
Query: 100 DLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
+M +Q DV++ S LIDGY ++A +F M +G + + +
Sbjct: 189 AVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNG------VTIDLRSYNIMI 242
Query: 156 GALDKGRMMHHYVI-------DNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS--GLMK 206
L K +M+ VI + P T+ T L+D K G I + +
Sbjct: 243 NGLSKAKMVDEAVILFKEMQFKSMTPDTITYST-LIDGLGKLGRISYVWDLIDEMRATGR 301
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
++V ++S++ G ++ +F+++ G +P+ +TY L+ G +K+A
Sbjct: 302 SANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQE 361
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
F L G Y M++ + R EAY
Sbjct: 362 IFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY 395
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 105/231 (45%), Gaps = 21/231 (9%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFD-----GIPVKNLVSWNSML 83
G ++ + K + D +SLI Y + AR +F+ G+ + +L S+N M+
Sbjct: 184 GKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTI-DLRSYNIMI 242
Query: 84 DGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPK 139
+G +K + A +F M + D +++S LIDG + G + +EMR +G
Sbjct: 243 NGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRS 302
Query: 140 PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV 199
N +T S+L G D + + D +V LVD K G +++A +
Sbjct: 303 ANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEI 362
Query: 200 FRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
F L+K DV ++ MI +GL +E+ LF E + G P+ +TY
Sbjct: 363 FHDLLIKGYRLDVRLYTVMI-----NGLCREA--LFDEAY--GCTPNAVTY 404
>IMGA|Medtr3g123960.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 31297186-31294366 E
EGN_Mt090430 20090702
Length = 631
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 114/233 (48%), Gaps = 15/233 (6%)
Query: 85 GYAKCGDISMARQVFDLMPE------QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
G+A+ D +V++ + E +D + CL+ GY KG EA+ ++E+ V G
Sbjct: 250 GHARSSDGDGVLRVYEELKEKLGGVVEDGVVLGCLMKGYFLKGMEKEAMECYQEVFVEGK 309
Query: 139 KPNEVTMVSVLCACAHLGALDKG-----RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI 193
K +++ SVL A A G D+ RM+ + +L + L +VD Y G
Sbjct: 310 KMSDIAYNSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKF 369
Query: 194 QEALHVFRS---GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
+EA+ VFRS KP D +N++I +G++ E+ +++ EM GV PDE TY
Sbjct: 370 KEAIEVFRSMGESRCKP-DTLSFNNLIEQLCNNGMILEAEEVYGEMEGKGVNPDEYTYGL 428
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
L+ C +A +F + ++G+ P Y +VD + + G++ +A F
Sbjct: 429 LMDTCFKENRPDDAASYFKKMVESGLRPNLAVYNRLVDGLVKVGKIDDAKFFF 481
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 70/165 (42%), Gaps = 13/165 (7%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGI------PVK---NLVSWNSMLDGYAKCGDISMARQVF 99
NS++ + A ++FD + P K NL S+N M+DGY G A +VF
Sbjct: 317 NSVLDALAKNGKFDEAMRLFDRMIKEHNPPAKLAVNLGSFNVMVDGYCAEGKFKEAIEVF 376
Query: 100 DLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
M E D LS++ LI+ G EA V+ EM G P+E T ++ C
Sbjct: 377 RSMGESRCKPDTLSFNNLIEQLCNNGMILEAEEVYGEMEGKGVNPDEYTYGLLMDTCFKE 436
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF 200
D ++++ L L + LVD K G I +A F
Sbjct: 437 NRPDDAASYFKKMVESGLRPNLAVYNRLVDGLVKVGKIDDAKFFF 481
>IMGA|Medtr6g076650.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 14803178-14800114 E
EGN_Mt090430 20090702
Length = 684
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/348 (23%), Positives = 150/348 (43%), Gaps = 45/348 (12%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ GV P+ T+ L + + K G + + + G + +V LI
Sbjct: 211 MMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGM 270
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWSC 112
+ AR++FD + + N+V+ +++ GY G++ MAR++FD + E +DV +++
Sbjct: 271 LVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNV 330
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLGA------------ 157
I GY + G +A+ VF+EM G PN VT ++ LC +
Sbjct: 331 FIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSG 390
Query: 158 --------------------LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
LD+ ++ + ++++ L + T L+ + EA+
Sbjct: 391 LTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAM 450
Query: 198 HVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
++ R +K + ++ +I G G + + L +EMH+ G PD ITY LL A
Sbjct: 451 NLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDAL 510
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ EA + F+ + K G+ P Y M+D ++ ++ EA
Sbjct: 511 WKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLF 558
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 137/302 (45%), Gaps = 19/302 (6%)
Query: 36 ITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGI----PVKNLVSWNSMLDGYAKCGD 91
I + G++ D + N IH Y + +A +VFD + V N+V++NS++D K G+
Sbjct: 316 IGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGE 375
Query: 92 ISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPN---EVT 144
+S A ++ M D+++ L+DG + D+A+ +F ++ SG P+
Sbjct: 376 VSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTI 435
Query: 145 MVSVLCACAHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
++ C +G A++ R MH + N +P +V + L+D + G I A +
Sbjct: 436 LIHGCCTSRRMGEAMNLLRDMH---LKNLVP-HIVTYSCLIDGLCRSGRISNAWRLLNEM 491
Query: 204 LMKPS--DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+K D ++ ++ + E++ LF++M G++PD + Y ++ +
Sbjct: 492 HVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERI 551
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI-PIQPTASMLGALLN 320
EA F + + P Y + + + ++G + ++F+ I I P +L L
Sbjct: 552 DEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLAA 611
Query: 321 GC 322
C
Sbjct: 612 LC 613
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 152/376 (40%), Gaps = 58/376 (15%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSM 82
+I G I K GY D N+++ + A + D I N VS+ +
Sbjct: 89 SFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGIL 148
Query: 83 LDGYAKCGDISMARQVFDLMP------------EQDVLSWSCLIDGYVRKGDYDEALAVF 130
++G + G ++ A + ++ + +V+ +S +ID R G DE +
Sbjct: 149 INGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFY 208
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EM +G PNE T S++ +G +G + +I L +++ + T L+D K
Sbjct: 209 NEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKN 268
Query: 191 GAIQEALHVFR--------------SGLMK-----------------------PSDVFIW 213
G + EA +F + LM DV+ +
Sbjct: 269 GMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTY 328
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
N I G+ G V++++ +F EM GV P+ +TY +L+ G V AW + +
Sbjct: 329 NVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHR 388
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDL 330
+G+TP ++D + ++ ++ +A + L + + P L++GC ++
Sbjct: 389 SGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGE 448
Query: 331 AETVGRK--LIELEPH 344
A + R L L PH
Sbjct: 449 AMNLLRDMHLKNLVPH 464
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 116/323 (35%), Gaps = 78/323 (24%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M R G+ PD +T L + + + + + ++G D + LIH + R
Sbjct: 386 MHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRR 445
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ A + + +KNLV ++++SCLIDG R
Sbjct: 446 MGEAMNLLRDMHLKNLVP---------------------------HIVTYSCLIDGLCRS 478
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G A + EM V GP P+ +T +L A LD+ + + +I L ++
Sbjct: 479 GRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCY 538
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVG 240
T ++D Y K I EA+++FR EMH+
Sbjct: 539 TIMIDGYCKSERIDEAINLFR---------------------------------EMHMKN 565
Query: 241 VKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAY 300
+ PD +TY L +A G W F + + P+ Y
Sbjct: 566 LVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLAA-------------- 611
Query: 301 QFLCQIPIQPTAS--MLGALLNG 321
LC+ +Q + S MLG NG
Sbjct: 612 --LCKRSLQTSVSQHMLGKSNNG 632
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/225 (20%), Positives = 95/225 (42%), Gaps = 13/225 (5%)
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLR 180
G + ++F ++ G + V + +VL G + K H +++N L V
Sbjct: 86 GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145
Query: 181 TSLVDMYAKCGAIQEALHVFR----------SGLMKPSDVFIWNSMIGGFACHGLVKESL 230
L++ + G + EA+++ R G +V +++ +I +G V E
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+ ++EM GV P+E TY +L+ G E + D + + G+ + ++D +
Sbjct: 206 EFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGL 265
Query: 291 ARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAE 332
+ G + EA + ++ +P AL+ G G +D+A
Sbjct: 266 CKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMAR 310
>IMGA|Medtr1g065910.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 13262166-13255941 H
EGN_Mt090430 20090702
Length = 624
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 113/223 (50%), Gaps = 14/223 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
NLV +N+ +DGY + G + A ++ +M ++ DV +++ L +G + YDEA +
Sbjct: 391 NLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCIL 450
Query: 131 EEMRVSGPKPNEVTM---VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
M G KPN VT + + C +L + R+ E+P ++ +L+D Y
Sbjct: 451 NSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAE--RLFRDMEKKGEVP-NIITYNTLIDAY 507
Query: 188 AKCGAIQEALHVFRSGLMKPS---DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
K +++A H +S ++ D++ ++S+I G G V E+L LF+EM + G+ +
Sbjct: 508 CKKEKVKQA-HKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRN 566
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
TY +++S + G EA+ +D + K G+ P + +V
Sbjct: 567 VATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 127/297 (42%), Gaps = 45/297 (15%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFDLMPEQD 106
LI YSS DI A K+F+ + KN+ ++SM+ + G++ A +FD M ++D
Sbjct: 293 LIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRD 352
Query: 107 VLS---------------------------------------WSCLIDGYVRKGDYDEAL 127
++ ++ +DGY R+G DEAL
Sbjct: 353 IVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEAL 412
Query: 128 AVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMY 187
+ M G + T + L D+ + + + +++ + +V T +++Y
Sbjct: 413 RLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIY 472
Query: 188 AKCGAIQEALHVFRSGLMKPS--DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
K G + EA +FR K ++ +N++I + VK++ + SEM G+ PD
Sbjct: 473 CKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDL 532
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
TY +L+ G V EA F+ + G+T Y M+ +++ G+ EA++
Sbjct: 533 YTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKL 589
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/400 (20%), Positives = 161/400 (40%), Gaps = 73/400 (18%)
Query: 60 DIPNARKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SW 110
++ A+++ D GI N+ ++N++L+ Y D ++ LM ++ V+ ++
Sbjct: 231 EVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATY 290
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPK------------------------------- 139
S LI Y GD +EA +FEEMR +
Sbjct: 291 SILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQ 350
Query: 140 ----PNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQE 195
PN T +++ G ++ ++ + + L LV+ + +D Y + G + E
Sbjct: 351 RDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDE 410
Query: 196 ALHVFRSGLMKP----SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNL 251
AL + +M+ +DVF +N + G E+ + + M GVKP+ +T+
Sbjct: 411 ALRL--QAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMF 468
Query: 252 LSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PI 308
+ G + EA F + K G P Y ++D + +V +A++ ++ +
Sbjct: 469 IEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGL 528
Query: 309 QPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFR-------- 360
P +L++G G++D A L+ + R G++ A +
Sbjct: 529 LPDLYTYSSLIHGECIVGRVDEA---------LKLFNEMRLKGITRNVATYTSMISGLSK 579
Query: 361 --RWDKARSMREAMERMGVKKSPGYSFVEMHGALHRFVAH 398
R D+A + + M ++G+ F + G+ H+ + H
Sbjct: 580 EGRADEAFKLYDEMMKIGLIPDDRV-FTSLVGSFHKPLTH 618
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 71/336 (21%), Positives = 137/336 (40%), Gaps = 52/336 (15%)
Query: 46 FVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDL 101
F N+L++ Y +D ++ + + +V +++ ++ Y+ GDI A ++F+
Sbjct: 253 FTYNTLLNAYVGRKDRKGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEE 312
Query: 102 MPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGA 157
M E+ DV +S +I R G+ A A+F+EM PN T +++ G
Sbjct: 313 MREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQ 372
Query: 158 LDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP----SDVFIW 213
++ ++ + + L LV+ + +D Y + G + EAL + +M+ +DVF +
Sbjct: 373 MEAAEILLLEMQSKGVDLNLVIFNTTMDGYCRRGKMDEALRL--QAIMEKKGINADVFTY 430
Query: 214 NSMIGG-----------------------------------FACHGLVKESLDLFSEMHI 238
N + G + G + E+ LF +M
Sbjct: 431 NILANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEK 490
Query: 239 VGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAE 298
G P+ ITY L+ A VK+A + G+ P Y+ ++ G+V E
Sbjct: 491 KGEVPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDE 550
Query: 299 AYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLA 331
A + ++ I + ++++G G+ D A
Sbjct: 551 ALKLFNEMRLKGITRNVATYTSMISGLSKEGRADEA 586
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/307 (23%), Positives = 130/307 (42%), Gaps = 19/307 (6%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPEQD 106
L + S R +V+D + K LV S +L +CG++ + F M E +
Sbjct: 151 LFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVESN 210
Query: 107 -----VLSWSCLIDGYVRKGDYDEALAVFEEMRVSG-PKPNEVTMVSVLCACAHLGALDK 160
V S + +ID R+G+ ++A + +EM G KPN T ++L A++G D+
Sbjct: 211 KFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLL--NAYVGRKDR 268
Query: 161 GRM--MHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSM 216
+ + + ++ ++ + L+ Y+ G I+EA +F K DV++++SM
Sbjct: 269 KGVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSM 328
Query: 217 IGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGM 276
I G +K + LF EM + P+ TY L+ G ++ A + G+
Sbjct: 329 ISWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGV 388
Query: 277 TPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAET 333
+ +D R G++ EA + + I L NG + D A+
Sbjct: 389 DLNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKC 448
Query: 334 VGRKLIE 340
+ ++E
Sbjct: 449 ILNSMVE 455
>IMGA|Medtr4g155160.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 38237221-38239764 H
EGN_Mt090430 20090702
Length = 695
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 131/280 (46%), Gaps = 19/280 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVF 130
++V++N++++GY ++ AR++F+ M E DVL+++ LIDGY + DEA+ +F
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNEL-----PLTLVLRTSLVD 185
+E+ P + S++ G + GR+ H + +E+ P +V L+D
Sbjct: 359 KELCNKNLVPTIASYNSLI-----DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILID 413
Query: 186 MYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKP 243
K G I EAL V + K ++ +N+M+ G+ V + D+F+ M G++P
Sbjct: 414 ALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEP 473
Query: 244 DEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
D + Y L++ +V EA F + + P Y ++D + G++ + L
Sbjct: 474 DILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELL 533
Query: 304 ---CQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
C P LL+ D A ++ R+++E
Sbjct: 534 DEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE 573
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/391 (24%), Positives = 162/391 (41%), Gaps = 15/391 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G PD +T+ L + + + K G E D N LI Y +
Sbjct: 291 MSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKM 350
Query: 61 IPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSC 112
+ A +F + KNLV S+NS++DG G IS +++ D M DV++++
Sbjct: 351 VDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNI 410
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LID ++G EAL V M G KPN VT +++ ++ + + + ++ +
Sbjct: 411 LIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSG 470
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESL 230
L ++ L++ Y K + EA+ +F+ K D+ +NS+I G G +
Sbjct: 471 LEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQ 530
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+L EM G PD ITY LL A +A F + + G+ P +VD +
Sbjct: 531 ELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNL 589
Query: 291 ARAGQVA---EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
+ ++ +A + L P L+N G A + K+ + + D
Sbjct: 590 CKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDA 649
Query: 348 -RYVGLSNVYAIFRRWDKARSMREAMERMGV 377
+ + V DKA +RE M G+
Sbjct: 650 ITFEIIIGVLLQRNETDKAEKLREEMIARGL 680
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 134/310 (43%), Gaps = 12/310 (3%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSS----FRD 60
G+ P TF L ++ I K+GY+ + N++I+ + F+
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKA 144
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDV----LSWSCLIDG 116
+ + + + + ++ ++++G +K G I A + M + V + +S LIDG
Sbjct: 145 LDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDG 204
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK-GRMMHHYVIDNELPL 175
+ G +AL + ++ G + VT S++ C +G + +++ V +N P
Sbjct: 205 LCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPD 264
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
L+D K G I EA V S + D+ +N+++ G+ V E+ +LF
Sbjct: 265 DYTFNI-LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELF 323
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
+ M G++PD + Y L+ +V EA F L + P Y ++D + +
Sbjct: 324 NRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNS 383
Query: 294 GQVAEAYQFL 303
G+++ + L
Sbjct: 384 GRISHVKKLL 393
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 91/214 (42%), Gaps = 5/214 (2%)
Query: 119 RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLV 178
R + D+A+ F M P P +L A +G + + + ++
Sbjct: 32 RFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIA 91
Query: 179 LRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
T L++ Y A + + L ++ +N++I GF +G++ ++LD +
Sbjct: 92 TFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNL 151
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G D+ TY L++ + G +K A + + K+ + P Y+ ++D + + G V
Sbjct: 152 LAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFV 211
Query: 297 AEAYQFLCQI---PIQPTASMLGALLNGCMNHGK 327
++A QI I A +L++GC + G+
Sbjct: 212 SDALGLCSQIGERGILLDAVTYNSLIDGCCSVGR 245
>IMGA|Medtr5g006800.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 843148-844925 E
EGN_Mt090430 20090702
Length = 553
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 133/300 (44%), Gaps = 21/300 (7%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFD----GIPVKNLVSWNSMLDGYAKCGDIS 93
K G E D N L+ + I A V D +P+ + S+N +++G+ K +
Sbjct: 231 KYGVEKDTAALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSS-PSFNILINGWCKVRNFE 289
Query: 94 MARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
AR+V + E DV +++ I+ Y D+ + V EEMR +G PN VT +L
Sbjct: 290 KARKVMEERKEHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILL 349
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF----RSGLM 205
G L K + + + + +SL+ + K G +++A VF + G++
Sbjct: 350 LGYGKAGQLSKALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVV 409
Query: 206 KPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+ DV +N+MI H + +L L EM KPD TY LL C +K
Sbjct: 410 R--DVVTYNTMISTACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLK 467
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI------PIQPTASMLGALL 319
+ D + K+ + P Y +V ++ +G++ EA F ++ P++ T +L L
Sbjct: 468 FLLDHMFKHDLCPDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKL 527
>IMGA|Medtr6g093100.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 19812271-19813888 E
EGN_Mt090430 20090702
Length = 458
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 111/213 (52%), Gaps = 6/213 (2%)
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
++++G+ ++ L E+ G + +S+L C L +L+ G+ +H ++ ++
Sbjct: 78 FLQEGNVNQVL----ELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ L L+ +Y KCG++++A VF M +V N MIGG+ +GL + L +F +M
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDK--MPDRNVGSLNLMIGGYNVNGLGIDGLLVFKQM 191
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
GV PDE T+ +L+ CA V+E F+ + + G+ P EHY + ++ AG +
Sbjct: 192 RQQGVVPDEETFALVLAVCALVDGVEEGLMQFESMKEYGIVPGMEHYLGVDNIFGCAGPL 251
Query: 297 AEAYQFLCQIPIQPTASMLGALLNGCMNHGKLD 329
EA +F+ +PI+ + L N +G L+
Sbjct: 252 DEAQEFIENMPIEAGVDVWETLRNFARIYGDLE 284
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 71/159 (44%), Gaps = 31/159 (19%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G F D+ F L K L ELG +H ++ ++ + + + N LI +Y
Sbjct: 94 GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLY--------- 144
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCG + AR+VFD MP+++V S + +I GY G
Sbjct: 145 ----------------------VKCGSVKDARKVFDKMPDRNVGSLNLMIGGYNVNGLGI 182
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRM 163
+ L VF++MR G P+E T VL CA + +++G M
Sbjct: 183 DGLLVFKQMRQQGVVPDEETFALVLAVCALVDGVEEGLM 221
>IMGA|Medtr8g112280.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 25167743-25169963 H
EGN_Mt090430 20090702
Length = 724
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 72/344 (20%), Positives = 150/344 (43%), Gaps = 13/344 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L+ GV P+ TF + + + + G +++ G D N++I
Sbjct: 197 VLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSR 256
Query: 61 IPNAR----KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
+ A K+ +G N ++NS++DGY K G + A ++ + D ++
Sbjct: 257 VVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCS 316
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
L++G+ + GD D+A+AVF++ G +P+ + +++ G + + + + +
Sbjct: 317 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 376
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS--DVFIWNSMIGGFACHGLVKESL 230
+ +++ K G + +A H+ + K D+F +N+++ G+ + ++
Sbjct: 377 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 436
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+L + M G+ PD ITY LL+ +E F + + G P Y +++ +
Sbjct: 437 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 496
Query: 291 ARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLA 331
+ +V EA L ++ + P G L+ G G LD A
Sbjct: 497 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGA 540
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 138/305 (45%), Gaps = 17/305 (5%)
Query: 42 ESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQ 97
ESD + I + A ++ +PV N V++ +++ G+ + GD AR+
Sbjct: 98 ESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARE 157
Query: 98 VFDLMPE----QDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACA 153
+FD M E DV +++ L+ +KG E+ +F+++ G PN T +
Sbjct: 158 LFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLC 217
Query: 154 HLGALDKG-RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI--QEALHVFRSGLMKPSDV 210
G+LD+ R++ + P + T + + K + +E LH +G +P+D
Sbjct: 218 KEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPND- 276
Query: 211 FIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA-CAHGGLVKEAWYFFD 269
F +NS+I G+ G+V ++ + + G KPDE TY +L++ C G + F D
Sbjct: 277 FTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKD 336
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHG 326
LGK G+ P Y ++ + + G + A Q + ++ +P ++NG G
Sbjct: 337 GLGK-GLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMG 395
Query: 327 KLDLA 331
L A
Sbjct: 396 CLSDA 400
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 132/314 (42%), Gaps = 22/314 (7%)
Query: 3 RVGVFPDHLTFPFLAKASACLLKR--ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
R G+ PD +T+ + C R E +H + G+E + F NS+I Y
Sbjct: 234 REGLRPDVVTYNTVI-CGLCRKSRVVEAEECLHKMVN-GGFEPNDFTYNSIIDGYCKKGM 291
Query: 61 IPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFD------LMPEQDVLSW 110
+ +A ++ K ++ S+++G+ + GD A VF L P ++ +
Sbjct: 292 VVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPS--IIVY 349
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DKGRMMHHYVI 169
+ LI G ++G AL + EM G KP+ T ++ +G L D ++ +
Sbjct: 350 NTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAIT 409
Query: 170 DNELPLTLVLRTSLVDMYAKCGAIQEALHVFR---SGLMKPSDVFIWNSMIGGFACHGLV 226
+P T LVD Y + + A+ + S M P DV +N+++ G
Sbjct: 410 KGCIPDIFTYNT-LVDGYCRQLKLDSAIELVNRMWSQGMTP-DVITYNTLLNGLCKTAKS 467
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
+E +++F M G P+ ITY ++ + + V EA + G+TP + +
Sbjct: 468 EEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTL 527
Query: 287 VDVMARAGQVAEAY 300
+ + G + AY
Sbjct: 528 ITGFCKVGDLDGAY 541
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/357 (21%), Positives = 150/357 (42%), Gaps = 55/357 (15%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVF-DGIPV---KNLVSWNSMLDGYAKCGDISMA 95
G++ D F SL++ + D A VF DG+ +++ +N+++ G + G I A
Sbjct: 306 GFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPA 365
Query: 96 RQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
Q+ + M E+ D+ +++ +I+G + G +A + + G P+ T +++
Sbjct: 366 LQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDG 425
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSD 209
LD + + + + ++ +L++ K +E + +F++ K +
Sbjct: 426 YCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPN 485
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA-CAHGGL-------- 260
+ +N++I V E++DL EM G+ PD +++ L++ C G L
Sbjct: 486 IITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFR 545
Query: 261 ---------------------------VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
+K A F + KNG P + Y ++D +
Sbjct: 546 GMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKT 605
Query: 294 GQVAEAYQFLCQIPIQ---PTASMLGALLNG-CMNHGKLDLAETVGRKLIELEPHQD 346
G V + Y+FL + + P+ + G +LN C+ H + E VG +I L +D
Sbjct: 606 GNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEH---KVQEAVG--IIHLMVQKD 657
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 98/235 (41%), Gaps = 7/235 (2%)
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
Y RKG EA+ FE M + P+ + +++ G ++ ++ + D ++
Sbjct: 41 YGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESD 100
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSG--LMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+ T + + + G AL + R+ L S+ + +++ GF G + +LF
Sbjct: 101 VYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFD 160
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
EM + PD T+ L+ A G V E+ FD + K G+ P + + + + G
Sbjct: 161 EMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEG 220
Query: 295 QVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPH 344
+ A + L + ++P ++ G ++ AE K++ EP+
Sbjct: 221 SLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPN 275
>IMGA|Medtr5g008360.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 1556137-1561842 E
EGN_Mt090430 20090702
Length = 1508
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 147/317 (46%), Gaps = 14/317 (4%)
Query: 79 WNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAV--FEE 132
+N+M+ YA+ G+ ++F+LM E+ D++S++ LI+ V+ LA+ +E
Sbjct: 267 YNAMMGVYARNGNFEKVNEMFNLMRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDE 326
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
+ G +P+ +T +++ AC+ L + + ++ N L +++ +Y +CG
Sbjct: 327 VGKFGLRPDIITYNTLISACSRESNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGF 386
Query: 193 IQEALHVF---RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
+A H+F +S P D +NS++ F+ G ++ D+ EM +G DE+TY
Sbjct: 387 ALKAEHLFEKLKSNGFSP-DAVTYNSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYN 445
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI--- 306
++ G EA + + +G P + Y ++D++ +A ++ EA + + ++
Sbjct: 446 TIIHMYGKHGRHDEALRLYRDMKSSGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDA 505
Query: 307 PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKA 365
++PT AL+ G+ AE ++ E D Y + + + F KA
Sbjct: 506 GVKPTLHTYSALICAYAKVGRRVEAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKA 565
Query: 366 RSMREAMERMGVKKSPG 382
++ + M G G
Sbjct: 566 AALYQEMIEAGFTPDTG 582
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/345 (22%), Positives = 152/345 (44%), Gaps = 22/345 (6%)
Query: 1 MLRVGVFPDHLTFPFL--AKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
M G PD ++F L AK +C L + + + K G D N+LI S
Sbjct: 290 MRERGCEPDIVSFNTLINAKVKSCATVSGLAIELLDEVGKFGLRPDIITYNTLISACSRE 349
Query: 59 RDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSW 110
++ A VF + +L ++N+M+ Y +CG A +F+ + D +++
Sbjct: 350 SNLKEAIGVFSHMESNRCQPDLWTYNAMISVYGRCGFALKAEHLFEKLKSNGFSPDAVTY 409
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ L+ + ++G+ ++ + EEM G +E+T +++ G D+ ++ +
Sbjct: 410 NSLLYAFSKEGNTEKVRDISEEMVKMGFGKDEMTYNTIIHMYGKHGRHDEALRLYRDMKS 469
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMIGGFACHGLVK 227
+ V T L+D+ K I+EA V L +KP+ + ++++I +A G
Sbjct: 470 SGRNPDAVTYTVLIDLLGKASKIEEASKVMSEMLDAGVKPT-LHTYSALICAYAKVGRRV 528
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
E+ + F+ M G+K D + Y +L +K+A + + + G TP + Y M+
Sbjct: 529 EAEETFNRMRESGIKADHLAYSVMLDFFLRFNEIKKAAALYQEMIEAGFTPDTGLYEVML 588
Query: 288 DVMARAG------QVAEAYQFLCQIPIQPTASMLGALLNGCMNHG 326
+ R +V + + L + +S+L + GC +HG
Sbjct: 589 PALVRENMGDVIERVVQDTKELGSMNPHDISSVL--VKGGCYDHG 631
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 118/274 (43%), Gaps = 29/274 (10%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGD-- 91
+AG++ D + NS++ +YSS + N ++ I L ++N+++ Y C D
Sbjct: 957 EAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDEETYNTLITMY--CRDHR 1014
Query: 92 ----ISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE----V 143
+S+ ++ L E ++ +I + ++ YD+A +FEE+R +G K + +
Sbjct: 1015 PEEGLSLMHKMKSLGLEPKRDTYRSMIAAFSKQQLYDQAEELFEELRSNGYKLDRSFYHL 1074
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS- 202
M + H A + +M I+ P T + +V Y K G +EA + ++
Sbjct: 1075 MMKMYRTSGDHQKAENLLEIMKEAGIE---PNTATMHLLMVS-YGKSGQPEEADRILKNL 1130
Query: 203 -GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+ D ++S+I + G K ++ +EM ++PD + + A + G V
Sbjct: 1131 RTMGAVLDTLPYSSVIDAYLKKGDAKAGIEKLTEMKEAAIEPDHRIWTCFIRAASLSGEV 1190
Query: 262 KEAWYFFDCLGKNG-------MTPKSEHYACMVD 288
+A + L G + KSE VD
Sbjct: 1191 NDANNLLNALQAVGFDLPIRLLGEKSESLVSEVD 1224
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 82/192 (42%), Gaps = 16/192 (8%)
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
W+ LI Y G Y+ A A+F M GP P ++ +L A + GR+ YV+
Sbjct: 827 WNALIHAYAFSGCYERARAIFNTMMREGPSPTVESVNGLLQAL-----IVDGRLSELYVV 881
Query: 170 DNELP-LTLVLRTS----LVDMYAKCGAIQEALHVFRSGLMKPSDVF----IWNSMIGGF 220
EL + L + S +++ +A+ G + E V+ MK + F ++ MIG
Sbjct: 882 IQELQDMDLKISKSSILLMLEAFAQAGNLFEVQKVYNG--MKAAGYFPTMHLYRLMIGLL 939
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKS 280
V++ + SEM G KPD + ++L + + + + G+ P
Sbjct: 940 CRFKRVRDVRVMLSEMGEAGFKPDLQIFNSVLKLYSSIEEFQNMGVIYQMIQDAGLAPDE 999
Query: 281 EHYACMVDVMAR 292
E Y ++ + R
Sbjct: 1000 ETYNTLITMYCR 1011
>IMGA|Medtr6g083780.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 17144123-17149069 E
EGN_Mt090430 20090702
Length = 755
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 156/354 (44%), Gaps = 17/354 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L+ G P +TF L K L H + G+ D+ +LI+
Sbjct: 122 ILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGR 181
Query: 61 IPNARKVF---DGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
I A ++ DG V+ N V +N ++D K ++ A ++ M + DV +++
Sbjct: 182 ITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNA 241
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G+ + A+ +F +M+ PN T ++ G ++ +++ ++ ++
Sbjct: 242 LISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDD 301
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKE 228
+ +V SL+D Y + +A +F S G++ ++V I+ +M+ GF +V E
Sbjct: 302 IKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVI--ANVQIYTTMVNGFCKIKMVDE 359
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+++LF EM + P+ +TY +L+ G + A D + G P Y+ ++D
Sbjct: 360 AINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILD 419
Query: 289 VMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+ + V +A L + I+P L+ G G+L+ A+ V L+
Sbjct: 420 ALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLL 473
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 175/412 (42%), Gaps = 34/412 (8%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + + P+ TF L K + + K + D NSL+ Y S
Sbjct: 262 MKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINK 321
Query: 61 IPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A+ +FD + + N+ + +M++G+ K + A +F+ M + +V+++S
Sbjct: 322 VNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSS 381
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LIDG + G AL + +EM G PN VT S+L A +DK + + D
Sbjct: 382 LIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQG 441
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
+ + T L+ + G +++A +VF L+K DV+ + MI GF G ++L
Sbjct: 442 IRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKAL 501
Query: 231 DLFSEMHIVGVKPDEITY-LNLLS-----------ACAHG----GLVKEAWYFFDCLGKN 274
L S+M G P+ TY L +LS HG G + A +
Sbjct: 502 ALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLHGSCKVGQTRAALQLLRRVDGK 561
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLA 331
+ P Y+ ++D M + V +A+ ++ I P AL++G GKL+
Sbjct: 562 LVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLN-- 619
Query: 332 ETVG--RKLIELEPHQDGRYVGLS-NVYAIFRRWDKARSMREAMERMGVKKS 380
+T+G K+ + D +S + + R +A+ + M + G+K S
Sbjct: 620 DTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEAKYVLSMMMKHGIKPS 671
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/385 (20%), Positives = 159/385 (41%), Gaps = 64/385 (16%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ + PD +T+ L + K I + G ++ + ++++ + +
Sbjct: 297 MMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKM 356
Query: 61 IPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A +F+ + + N+V+++S++DG K G I A ++ D M ++ +++++S
Sbjct: 357 VDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSS 416
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHL-------------- 155
++D + D+A+A+ ++ G +P+ T ++ LC L
Sbjct: 417 ILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKG 476
Query: 156 -------------GALDKG----------RMMHHYVIDNELPLTLVLRT----------- 181
G DKG +M + I N LV+ +
Sbjct: 477 YNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAE 536
Query: 182 SLVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIV 239
L+ K G + AL + R G + +V +++++I G LV ++ DL+SEM
Sbjct: 537 KLLHGSCKVGQTRAALQLLRRVDGKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAK 596
Query: 240 GVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+ PD ITY L+S G + + F+ + + P + VD + G+V EA
Sbjct: 597 RISPDVITYSALISGFCIVGKLNDTIGLFNKMTAENINPDVYTFNISVDAFCKEGRVKEA 656
Query: 300 YQFLCQI---PIQPTASMLGALLNG 321
L + I+P+ L+NG
Sbjct: 657 KYVLSMMMKHGIKPSVVTYNTLMNG 681
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 121/296 (40%), Gaps = 51/296 (17%)
Query: 5 GVFPDHLTFPFLAKASAC--------------LLKRELGLAIHGYITKAGYESDRFVSNS 50
G+ PD T+ L K C LL + L ++ Y D+ +
Sbjct: 441 GIRPDMYTYTILIKG-LCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDK 499
Query: 51 LIHMYSSFRD---IPNARK----VFDGIPVKNLVSWNSMLDGYAKCGD----ISMARQVF 99
+ + S D IPNA+ + + +L G K G + + R+V
Sbjct: 500 ALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLHGSCKVGQTRAALQLLRRVD 559
Query: 100 DLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL- 158
+ + +V+ +S +IDG + ++A ++ EM P+ +T +++ +G L
Sbjct: 560 GKLVQPNVIMYSTIIDGMCKGKLVNDAFDLYSEMVAKRISPDVITYSALISGFCIVGKLN 619
Query: 159 DKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNS 215
D + + +N P S VD + K G ++EA +V + +KPS V +N+
Sbjct: 620 DTIGLFNKMTAENINPDVYTFNIS-VDAFCKEGRVKEAKYVLSMMMKHGIKPS-VVTYNT 677
Query: 216 MIGGFAC----------------HGLVK---ESLDLFSEMHIVGVKPDEITYLNLL 252
++ G+ G+VK E+++L+ EMH PD +TY +L+
Sbjct: 678 LMNGYCLVKEMNMAKDIFNTMNQSGVVKMIDEAINLYEEMHCRKNIPDVVTYSSLV 733
>IMGA|Medtr7g015630.1 Smr protein/MutS2 C-terminal
chr07_pseudomolecule_IMGAG_V3 3963835-3967136 E
EGN_Mt090430 20090702
Length = 890
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 128/265 (48%), Gaps = 12/265 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD LT+ L A E+ + + D F N+ +
Sbjct: 310 MIANGLMPDRLTYNSLLSVCASKGMWEMAQKLLSEMDHRCIVPDVFTYNTYLDTLCKAGQ 369
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
I AR+VF+ + K N+V++++M+DGYAK + A +++ M + D +S++
Sbjct: 370 IDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNT 429
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK-GRMMHHYVIDN 171
L+ Y + G+ DEA+ +EM SG + VT ++L G D+ R+ N
Sbjct: 430 LVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYDEVRRLFEEMKARN 489
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKES 229
P TL T ++DMY K QEA+ V+R M DV ++++I +GL++ S
Sbjct: 490 IYPNTLTYST-MIDMYTKGEMFQEAMDVYREFKMARLEIDVVFYSAIIDTLCKNGLMESS 548
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSA 254
+ L M G+KP+ +T+ +++ A
Sbjct: 549 IMLLMAMMEKGIKPNVVTFNSIIDA 573
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 136/290 (46%), Gaps = 21/290 (7%)
Query: 27 ELGLAIHGYITKA---GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP----VKNLVSW 79
E+ LA+ G +A GY S +++I + P+A +F + V N++++
Sbjct: 228 EINLAL-GLFERARLEGYGSTVHSFSAMISAFGRNGRFPDAVDLFRSMSSWGVVPNVITY 286
Query: 80 NSMLDGYAKCGDIS--MARQVFD------LMPEQDVLSWSCLIDGYVRKGDYDEALAVFE 131
NS++D AK G++S + + +D LMP D L+++ L+ KG ++ A +
Sbjct: 287 NSIIDAGAK-GEVSFDVVVKFYDEMIANGLMP--DRLTYNSLLSVCASKGMWEMAQKLLS 343
Query: 132 EMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCG 191
EM P+ T + L G +D R + + + +V ++++D YAK
Sbjct: 344 EMDHRCIVPDVFTYNTYLDTLCKAGQIDLARRVFEEMSSKRVWPNVVTYSAMMDGYAKAN 403
Query: 192 AIQEALHVFRSGLMKPS--DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYL 249
+++AL+++ ++ D +N+++G + G + E+++ EM G+ D +TY
Sbjct: 404 LLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLDEAIEKCKEMERSGINRDVVTYN 463
Query: 250 NLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
LLS G+ E F+ + + P + Y+ M+D+ + EA
Sbjct: 464 ALLSGYGKHGMYDEVRRLFEEMKARNIYPNTLTYSTMIDMYTKGEMFQEA 513
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 28/335 (8%)
Query: 18 KASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSF---RDIPNARKVFDGIPVK 74
+A +CL K +A + YE + I+M F R + +A+K FD I K
Sbjct: 147 EALSCLFKAGNNIAAIDNVF-ISYEHKLWEVEDYIYMLKEFGNTRSLLHAKKCFDFIMSK 205
Query: 75 N--------LVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGD 122
LVS +M+ + G+I++A +F+ + V S+S +I + R G
Sbjct: 206 QNGRVDKGKLVS--AMIGTLGRLGEINLALGLFERARLEGYGSTVHSFSAMISAFGRNGR 263
Query: 123 YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY--VIDNELPLTLVLR 180
+ +A+ +F M G PN +T S++ A A G + ++ Y +I N L +
Sbjct: 264 FPDAVDLFRSMSSWGVVPNVITYNSIIDAGAK-GEVSFDVVVKFYDEMIANGLMPDRLTY 322
Query: 181 TSLVDMYAKCGA---IQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMH 237
SL+ + A G Q+ L + P DVF +N+ + G + + +F EM
Sbjct: 323 NSLLSVCASKGMWEMAQKLLSEMDHRCIVP-DVFTYNTYLDTLCKAGQIDLARRVFEEMS 381
Query: 238 IVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
V P+ +TY ++ A L+++A ++ + + Y +V + + G +
Sbjct: 382 SKRVWPNVVTYSAMMDGYAKANLLEDALNLYEEMKLRSVCLDRVSYNTLVGIYEKLGNLD 441
Query: 298 EAYQFLCQIP---IQPTASMLGALLNGCMNHGKLD 329
EA + ++ I ALL+G HG D
Sbjct: 442 EAIEKCKEMERSGINRDVVTYNALLSGYGKHGMYD 476
>IMGA|Medtr1g065870.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 13240167-13243541 E
EGN_Mt090430 20090702
Length = 489
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/358 (22%), Positives = 155/358 (43%), Gaps = 39/358 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L++G PD +T+ L + GL ++G + ++ DR VS + + S+
Sbjct: 110 ILKLGYQPDIITYTTLIR----------GLCLNGQVKESLNFHDRLVSQGIKLDHVSYGT 159
Query: 61 IPNA--------------RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ- 105
+ N RK+ I ++V +N+++DG C D + R FDL E
Sbjct: 160 LINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL--CKD-KLVRDAFDLYCEMF 216
Query: 106 ------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALD 159
+V++++ LI G+ G D+A + EM + PN T +++ G +
Sbjct: 217 EKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMR 276
Query: 160 KGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMI 217
+ + + ++ + + +L+D Y +A +VF + + DV ++ MI
Sbjct: 277 EAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMI 336
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G + ++ E++DLF M V PD + Y +L+ G + A + D + G
Sbjct: 337 SGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQP 396
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAE 332
P Y ++D + ++ QV +A L +I IQ L++G G+L A+
Sbjct: 397 PNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQ 454
>IMGA|Medtr8g148450.1 Smr protein/MutS2 C-terminal
chr08_pseudomolecule_IMGAG_V3 36720898-36718691 E
EGN_Mt090430 20090702
Length = 706
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/317 (24%), Positives = 145/317 (45%), Gaps = 14/317 (4%)
Query: 32 IHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPV----KNLVSWNSMLDGYA 87
+ G + + G + D +++I S A + F+ +P+ + V+++ M+D Y
Sbjct: 203 VFGEMLQRGVKPDNVTFSTIISCARSCYLPDKAVEWFEKMPLFGCEPDDVTYSVMIDSYG 262
Query: 88 KCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV 143
K GDI MA ++D + + ++S LI Y G+YD L V+EEM+ G KPN V
Sbjct: 263 KAGDIDMALNLYDRARTEKWRIEPATFSTLIKMYGVAGNYDGCLNVYEEMKALGVKPNLV 322
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
++L A + R ++ +I+N++ SL+ Y + ++AL V+R
Sbjct: 323 VYNTLLDAMGRAKRPWQARTIYKEMINNDILPNRATYASLLHAYGRARFCEDALVVYREM 382
Query: 204 LMKPSDV--FIWNSMIGGFACHGLVKESLDLFSEMHIVGV-KPDEITYLNLLSACAHGGL 260
K D+ ++NS++ A G + ++F +M PD T+ +L++ + G
Sbjct: 383 REKEMDLNTHLYNSLLAMCADVGYTDLAFEIFEDMKSSDTCSPDSWTFSSLITIYSCSGR 442
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQ---VAEAYQFLCQIPIQPTASMLGA 317
V EA + + ++G P +V +A + V + + L + I+P G
Sbjct: 443 VSEAERMMNEMIESGFEPTIFVLTSLVQCYGKAKRTDDVVKTFNQLLDMGIEPDDRFCGC 502
Query: 318 LLNGCMNHGKLDLAETV 334
LLN K +L + +
Sbjct: 503 LLNVMTQTPKEELGKLI 519
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 106/241 (43%), Gaps = 17/241 (7%)
Query: 102 MPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DK 160
+P ++V+ ++ + + + D D A VF EM G KP+ VT S + +CA L DK
Sbjct: 176 IPTREVILYNVTLKVFRKCKDLDGAEKVFGEMLQRGVKPDNVTF-STIISCARSCYLPDK 234
Query: 161 GRMMHHYVIDNELPL-----TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDV--FIW 213
++PL V + ++D Y K G I AL+++ + + +
Sbjct: 235 AVEWFE-----KMPLFGCEPDDVTYSVMIDSYGKAGDIDMALNLYDRARTEKWRIEPATF 289
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
+++I + G L+++ EM +GVKP+ + Y LL A +A + +
Sbjct: 290 STLIKMYGVAGNYDGCLNVYEEMKALGVKPNLVVYNTLLDAMGRAKRPWQARTIYKEMIN 349
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDL 330
N + P YA ++ RA +A Y+ + + + + +LL C + G DL
Sbjct: 350 NDILPNRATYASLLHAYGRARFCEDALVVYREMREKEMDLNTHLYNSLLAMCADVGYTDL 409
Query: 331 A 331
A
Sbjct: 410 A 410
>IMGA|Medtr6g088950.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 18053917-18052491 E
EGN_Mt090430 20090702
Length = 437
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/363 (22%), Positives = 154/363 (42%), Gaps = 47/363 (12%)
Query: 19 ASACLLKR-ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL- 76
AS L R + L+ H + G + D F N LI+ +S A ++ I K L
Sbjct: 71 ASLALSNRYSIALSFHQKLHFKGIKPDLFTYNVLINCFSQLGHTHFAFFLYLPIFSKGLD 130
Query: 77 -VSWNSMLDGYAKCGDISMARQV--------------------------------FDLMP 103
VS+ ++++G K G+ A ++ FDL
Sbjct: 131 RVSYETLINGLCKVGETRAALRLLKEVNEKIVQYDVVMYTAIINGLCKDKLVDDAFDLYT 190
Query: 104 EQ-------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLG 156
E DV +++ +I G+ G +A+ +F +M++ + +E T +++ A G
Sbjct: 191 EMVAKRVSPDVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEG 250
Query: 157 ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWN 214
+ +G+ + ++ + ++ SL+D Y + +A ++F + + + ++V ++
Sbjct: 251 NVREGKAVVAVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYS 310
Query: 215 SMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKN 274
MI GF ++ E+++LF EMH + PD I Y +L+ G + +A D +
Sbjct: 311 IMINGFCKVKMMDEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDR 370
Query: 275 GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLA 331
G P Y ++ + + V + L +I IQP A L NG G+L+ A
Sbjct: 371 GQPPNIITYNSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEA 430
Query: 332 ETV 334
+
Sbjct: 431 REI 433
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/235 (20%), Positives = 114/235 (48%), Gaps = 10/235 (4%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVF 99
D F N++I+ + + +A +F+ + ++N+ ++N+++ + K G++ + V
Sbjct: 200 DVFTYNAMIYGFCVVGRLKDAIGLFNDMKLENVEADEYTFNTLVSAFCKEGNVREGKAVV 259
Query: 100 DLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHL 155
+M ++ D+++++ L+DGY + D+A +F M G N + ++ +
Sbjct: 260 AVMMKEGVKPDIITYNSLMDGYCLVKEVDKAKNIFNTMVQRGVTANVRSYSIMINGFCKV 319
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIW 213
+D+ + + E+ + +SL+D + K G I +AL + +P ++ +
Sbjct: 320 KMMDEAMNLFQEMHCKEIIPDTIAYSSLIDGFCKSGRIPQALELVDEMHDRGQPPNIITY 379
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFF 268
NS++ V++++ L ++ + G++PD TY L + G ++EA F
Sbjct: 380 NSILYALCKIHHVEKTIALLRKIKVKGIQPDAYTYTILTNGLFKDGRLEEAREIF 434
>IMGA|Medtr4g104120.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 22628309-22631281 E
EGN_Mt090430 20090702
Length = 834
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 124/261 (47%), Gaps = 10/261 (3%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNA----RKVFDGIPVKNLVSWNSMLDGYAKCGDIS 93
K G+ S NS+I + + +A R++ + +++++ S++DG K I
Sbjct: 562 KQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIG 621
Query: 94 MARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
+A ++ M + DV+++S LIDG+ + D + A F E+ G PN V S++
Sbjct: 622 LALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMI 681
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP-- 207
HL ++ +H +I N++P L + TS++ K G + AL ++ L K
Sbjct: 682 SGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIV 741
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
D+ ++ +I G + +G ++ + + EM + P + Y L++ G ++EA+
Sbjct: 742 PDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNFREGNLQEAFRL 801
Query: 268 FDCLGKNGMTPKSEHYACMVD 288
D + G+ P Y +V+
Sbjct: 802 HDEMLDKGLVPDDTTYDILVN 822
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 84/376 (22%), Positives = 158/376 (42%), Gaps = 51/376 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV PD + F L + + E ++ + G + + F+ NSL+ + + +A
Sbjct: 355 GVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHA 414
Query: 65 RKVFD-----GIP---------------------------------VKNLVSWNSMLDGY 86
+FD GI +LVS+N+++ G+
Sbjct: 415 YGLFDEAVEHGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGH 474
Query: 87 AKCGDI----SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
K G + SM + + + + + ++++ LIDG+ +KGD + A VFE+M + P +
Sbjct: 475 CKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTD 534
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFR- 201
T +V+ G + + + + I T + S++D + K GA+ AL +R
Sbjct: 535 HTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYRE 594
Query: 202 ---SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHG 258
SG+ DV + S+I G + +L++ S+M G+K D + Y L+
Sbjct: 595 MCESGI--SPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKM 652
Query: 259 GLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASML 315
++ A FF L G+TP + Y M+ + A +Q + + + +
Sbjct: 653 HDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVY 712
Query: 316 GALLNGCMNHGKLDLA 331
+++ G + GKL LA
Sbjct: 713 TSIIGGLLKEGKLSLA 728
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/395 (22%), Positives = 172/395 (43%), Gaps = 56/395 (14%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSW----NSMLDGYAKCGDIS 93
+ G+ESD V N L+ + I +A + F + +LV W N++L + +
Sbjct: 143 RYGFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVC 202
Query: 94 MARQVFDLMPEQ---------------------------------------DVLSWSCLI 114
ARQ++D M E+ D ++S L+
Sbjct: 203 DARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILV 262
Query: 115 DGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
R+ D + A + +EMR G P++ T +V+ AC G + + ++ LP
Sbjct: 263 QAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLP 322
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFR---SGLMKPSDVFIWNSMIGGFACHGLVKESLD 231
+ +++ SL+ Y G + AL +F G + P DV I++ +I G + G ++++ +
Sbjct: 323 MNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVP-DVVIFSVLINGCSKVGDMEKAYE 381
Query: 232 LFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMA 291
L++ M ++G++P+ +LL L++ A+ FD ++G+T Y ++ +
Sbjct: 382 LYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGIT-NVVTYNILLKWLG 440
Query: 292 RAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQD 346
G+V EA ++ + I P+ L+ G G +D A ++ + ++E L+P+
Sbjct: 441 ELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNA- 499
Query: 347 GRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSP 381
Y L + F++ D R+ + M +P
Sbjct: 500 VTYTLL--IDGFFKKGDSERAFVVFEQMMAANIAP 532
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 122/266 (45%), Gaps = 42/266 (15%)
Query: 70 GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWSCLIDGYVRKGDYDE 125
G+P+ N++ S++ GY GD+++A Q+FD + E DV+ +S LI+G + GD ++
Sbjct: 320 GLPM-NVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEK 378
Query: 126 ALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVD 185
A ++ M++ G +PN V +V+ L H ++ + H Y + +E
Sbjct: 379 AYELYTRMKLMGIQPN-VFIVNSLLEGFH----EQNLLEHAYGLFDE------------- 420
Query: 186 MYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
A++ + ++V +N ++ G V E+ +L+ +M G+ P
Sbjct: 421 ------AVEHGI----------TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSL 464
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
++Y NL+ G + +A+ + + G+ P + Y ++D + G A+ Q
Sbjct: 465 VSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQ 524
Query: 306 I---PIQPTASMLGALLNGCMNHGKL 328
+ I PT ++NG G++
Sbjct: 525 MMAANIAPTDHTFNTVINGLGKTGRV 550
>IMGA|Medtr6g084050.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 17305941-17299479 E
EGN_Mt090430 20090702
Length = 490
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 155/365 (42%), Gaps = 17/365 (4%)
Query: 29 GLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLD 84
L++H + G SD F N LI+ +S + VF I K N +++N+++
Sbjct: 89 ALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIK 148
Query: 85 GYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKP 140
G G I A D + Q D +S+ LI+G + G AL + + + +P
Sbjct: 149 GLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQP 208
Query: 141 NEVT---MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
N V ++ +C G + + +MM + ++ L +V SL+D Y I +A
Sbjct: 209 NAVMYNMIIDNMCKAKLEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAK 268
Query: 198 HVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
+F S + ++V + +MI G +V E+++LF EM + P+ +TY +L+
Sbjct: 269 DIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGL 328
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTA 312
G + D + G P Y ++D + + V +A L + I+P
Sbjct: 329 GKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDM 388
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMREA 371
L+ G GKL+ A+ V L+ + D Y + + + +D A ++
Sbjct: 389 YTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSK 448
Query: 372 MERMG 376
ME G
Sbjct: 449 MEDNG 453
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 10/225 (4%)
Query: 34 GYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP----VKNLVSWNSMLDGYAKC 89
G K D NSL+ Y ++I A+ +FD + + N+ S+ +M++G K
Sbjct: 237 GVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKI 296
Query: 90 GDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM 145
+ A +F+ M + +V++++ LIDG + G L + +EM G PN +T
Sbjct: 297 KMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITY 356
Query: 146 VSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLM 205
S+L A +DK + + D + + T L+ + G +++A VF L+
Sbjct: 357 NSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLV 416
Query: 206 K--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
K DV+ + MI GF GL +L L S+M G P+ TY
Sbjct: 417 KGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDNGCIPNAKTY 461
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 118/274 (43%), Gaps = 40/274 (14%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALA 128
+ ++V++NS++DGY +I+ A+ +FD M + V+ S++ +I+G + DEA+
Sbjct: 245 ILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVN 304
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+FEEMR PN VT S++ LG + + VL+ LVD
Sbjct: 305 LFEEMRCRKIIPNVVTYNSLIDGLGKLGKI-----------------SCVLK--LVDEMH 345
Query: 189 KCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
G +P ++ +NS++ + V +++ L + + G++PD TY
Sbjct: 346 DRG--------------QPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTY 391
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI 308
L+ G +++A F+ L G Y M+ G A L ++
Sbjct: 392 TVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMED 451
Query: 309 Q---PTASMLGALLNGCMNHGKLDLAETVGRKLI 339
P A ++ + D+AE + R++I
Sbjct: 452 NGCIPNAKTYEIVILSLFEKDENDMAEKLLREMI 485
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 80/181 (44%), Gaps = 15/181 (8%)
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
SD F +N +I F+ GL S +F ++ G P+ IT+ L+ G + +A F
Sbjct: 103 SDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNF 162
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTA--------SMLG 316
D + G Y +++ + + G++ A Q L ++ +QP A +M
Sbjct: 163 HDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCK 222
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
A L G + K+ L T+ + +I Y L + Y + + +KA+ + ++M G
Sbjct: 223 AKLEGKVKEAKMMLGVTMKKDIIL----DVVTYNSLMDGYCLVKEINKAKDIFDSMASRG 278
Query: 377 V 377
V
Sbjct: 279 V 279
>IMGA|Medtr7g041080.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 10439909-10443722 E
EGN_Mt090430 20090702
Length = 721
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 177/452 (39%), Gaps = 83/452 (18%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKR---ELGLAIHGYITKA-GYESDRFVSNSLIHMYS 56
M +GV P +TF LLKR + ++ + K G + D + N LI +
Sbjct: 181 MKLIGVSPGVVTF---NSVLLVLLKRGRTNMAKEVYDEMLKTYGVKPDTYTYNILIRGFC 237
Query: 57 S----------FRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ- 105
F+++ + FD P ++V++N+++DG + G I +A + + M ++
Sbjct: 238 KNSMVDEGFYFFKEMTS----FDCDP--DVVTYNTLVDGLCRAGKIKVAHNLVNGMSKKC 291
Query: 106 -----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
DV++++ LI GY RK + DEAL + EEM G KPN VT +++ DK
Sbjct: 292 KDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPNIVTYNTLIKGLCEAQKWDK 351
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGF 220
++ L M G+I +A +N++I
Sbjct: 352 ------------------MKEILEQMKGDGGSIPDAC--------------TFNTLINSH 379
Query: 221 ACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD-------CLGK 273
C G + E+ +F M + V D +Y L+ G +A FD L
Sbjct: 380 CCAGNLDEAFKVFENMKKLEVSADSASYSVLIRTLCQKGDYGKAEMLFDELFEKEILLSS 439
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI-------PIQPTASMLGALLNGCMNHG 326
G P + Y CM + G+ +A + L Q+ P+ +LG G +G
Sbjct: 440 YGPKPLAASYKCMFQYLCENGKTKKAERVLRQLMKRGTQDPLSYQIVILGHCKEGSYENG 499
Query: 327 KLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYSFV 386
L + R + D G F R DK +E +E+M +K S
Sbjct: 500 YGLLVWMLRRDFLPDIDIYDYLIDG-------FLRKDKPLLAKETLEKM-LKSSYKPQTS 551
Query: 387 EMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQ 418
H L+R + H S+ I MML + Q
Sbjct: 552 TWHSILNRLLEQGCVHESAGVIVMMLERNIRQ 583
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 103/252 (40%), Gaps = 19/252 (7%)
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
++ LI Y G + E++ +FE M++ G P VT SVL L L +GR +
Sbjct: 158 FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVL-----LVLLKRGRTNMAKEV 212
Query: 170 DNELPLTLVLRTS------LVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFA 221
+E+ T ++ L+ + K + E + F+ + DV +N+++ G
Sbjct: 213 YDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNTLVDGLC 272
Query: 222 CHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPK 279
G +K + +L + M + PD +TY L+ V EA + + G+ P
Sbjct: 273 RAGKIKVAHNLVNGMSKKCKDLSPDVVTYTTLIRGYCRKQEVDEALDILEEMNGRGLKPN 332
Query: 280 SEHYACMVDVMARAGQVAEAYQFLCQIPIQ----PTASMLGALLNGCMNHGKLDLAETVG 335
Y ++ + A + + + L Q+ P A L+N G LD A V
Sbjct: 333 IVTYNTLIKGLCEAQKWDKMKEILEQMKGDGGSIPDACTFNTLINSHCCAGNLDEAFKVF 392
Query: 336 RKLIELEPHQDG 347
+ +LE D
Sbjct: 393 ENMKKLEVSADS 404
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 81/185 (43%), Gaps = 10/185 (5%)
Query: 202 SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+G +K D F +NS+I + GL KES+ LF M ++GV P +T+ ++L G
Sbjct: 148 NGEVKLEDRF-FNSLIRSYGEAGLFKESVKLFENMKLIGVSPGVVTFNSVLLVLLKRGRT 206
Query: 262 KEAWYFFDCLGKN-GMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGA 317
A +D + K G+ P + Y ++ + V E + F ++ P
Sbjct: 207 NMAKEVYDEMLKTYGVKPDTYTYNILIRGFCKNSMVDEGFYFFKEMTSFDCDPDVVTYNT 266
Query: 318 LLNGCMNHGKLDLAETV----GRKLIELEPHQDGRYVGLSNVYAIFRRWDKARSMREAME 373
L++G GK+ +A + +K +L P Y L Y + D+A + E M
Sbjct: 267 LVDGLCRAGKIKVAHNLVNGMSKKCKDLSPDV-VTYTTLIRGYCRKQEVDEALDILEEMN 325
Query: 374 RMGVK 378
G+K
Sbjct: 326 GRGLK 330
>IMGA|Medtr7g015600.1 Smr protein/MutS2 C-terminal
chr07_pseudomolecule_IMGAG_V3 3954995-3951849 E
EGN_Mt090430 20090702
Length = 849
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 125/265 (47%), Gaps = 12/265 (4%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML G+ PD LT+ L A E + + + G D F N+ +
Sbjct: 275 MLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQ 334
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
I AR+V + + + +V++++M+DG AK + A +++ M + D +S++
Sbjct: 335 IDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNT 394
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK-GRMMHHYVIDN 171
++ Y + G +DEA+ +EM G K + VT ++L G D+ R+ N
Sbjct: 395 MVGIYAKLGRFDEAIGQCKEMESCGMKRDVVTYNALLSGYGRYGMYDEVRRLFEEMKAWN 454
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKES 229
P TL T ++D+Y K G QEA+ V++ DV + S+I +GLV+ S
Sbjct: 455 IYPNTLTYST-MIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCKNGLVESS 513
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSA 254
+ L M G+KP+ +T+ +++ A
Sbjct: 514 IMLLIAMIEKGIKPNVVTFNSIIDA 538
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 110/232 (47%), Gaps = 7/232 (3%)
Query: 75 NLVSWNSMLDGYAKCG-DISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAV 129
NL+S+NS++D AK D + + FD M + D L+++ L+ KG ++ A +
Sbjct: 247 NLISYNSLIDAGAKGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGMWETAQKL 306
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
EM G + T + L G +D R + + + T+V ++++D AK
Sbjct: 307 LSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAK 366
Query: 190 CGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEIT 247
+++AL+++ ++ D +N+M+G +A G E++ EM G+K D +T
Sbjct: 367 ANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEAIGQCKEMESCGMKRDVVT 426
Query: 248 YLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
Y LLS G+ E F+ + + P + Y+ M+DV + G EA
Sbjct: 427 YNALLSGYGRYGMYDEVRRLFEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEA 478
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/356 (21%), Positives = 148/356 (41%), Gaps = 51/356 (14%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAI----HGYITKAGYESDRFVSNSLIHMYSSFRD 60
GV+P+ +++ L A A K E+ + + G DR NSL+ + +S
Sbjct: 243 GVYPNLISYNSLIDAGA---KGEVDFDVVVKFFDEMLAEGIVPDRLTYNSLLSVCASKGM 299
Query: 61 IPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
A+K+ + K +V ++N+ LD K G I +AR+V + M + V+++S
Sbjct: 300 WETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYST 359
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
+IDG + ++AL ++EEM++ + V+ +++ A LG D+
Sbjct: 360 MIDGCAKANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDE------------ 407
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
AI + + G+ + DV +N+++ G+ +G+ E L
Sbjct: 408 -------------------AIGQCKEMESCGMKR--DVVTYNALLSGYGRYGMYDEVRRL 446
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F EM + P+ +TY ++ GG+ +EA + K + Y ++D + +
Sbjct: 447 FEEMKAWNIYPNTLTYSTMIDVYTKGGMFQEAMDVYKDFKKAQLEVDVVFYTSIIDSLCK 506
Query: 293 AGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQ 345
G V + L + I+P ++++ L+ + +E Q
Sbjct: 507 NGLVESSIMLLIAMIEKGIKPNVVTFNSIIDASRQSPTLEYGVHGSSQAVEYPTEQ 562
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 99/212 (46%), Gaps = 19/212 (8%)
Query: 181 TSLVDMYAKCGAIQEALHVFRSGLMKPSDVF----IWNSMIGGFACHGLVKESL--DLFS 234
++++ Y + G +A+ +FRS M+ V+ +NS+I A G V + F
Sbjct: 217 SAMISAYGRNGHFSDAVDLFRS--MRSWGVYPNLISYNSLIDAGA-KGEVDFDVVVKFFD 273
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
EM G+ PD +TY +LLS CA G+ + A + + G+ + Y +D + + G
Sbjct: 274 EMLAEGIVPDRLTYNSLLSVCASKGMWETAQKLLSEMDQKGIVRDAFTYNTYLDTLCKGG 333
Query: 295 QVAEAYQFLCQIP---IQPTASMLGALLNGCMN----HGKLDLAETVGRKLIELEPHQDG 347
Q+ A + L ++ + PT +++GC L+L E + + I ++
Sbjct: 334 QIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAKANLLEDALNLYEEMKLRSISVDRVSYN 393
Query: 348 RYVGLSNVYAIFRRWDKARSMREAMERMGVKK 379
VG +YA R+D+A + ME G+K+
Sbjct: 394 TMVG---IYAKLGRFDEAIGQCKEMESCGMKR 422
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 127/282 (45%), Gaps = 28/282 (9%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPN---ARKVFDGIPVKN--------LVSWNSMLDGYAK 88
YES+ + I+M F + + A K FD I K LVS +M+ +
Sbjct: 133 AYESELWEVEDYIYMLKEFGNTGHFLLATKCFDFIIWKQNGRIAKGKLVS--TMIGTLGR 190
Query: 89 CGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
G+I+ A ++F+ + V S+S +I Y R G + +A+ +F MR G PN ++
Sbjct: 191 LGEINHALRLFESARLEGHGNTVYSFSAMISAYGRNGHFSDAVDLFRSMRSWGVYPNLIS 250
Query: 145 MVSVLCACAHLGALDKGRMMHHY---VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF- 200
S++ A A G +D ++ + + + +P L SL+ + A G + A +
Sbjct: 251 YNSLIDAGAK-GEVDFDVVVKFFDEMLAEGIVPDRLTY-NSLLSVCASKGMWETAQKLLS 308
Query: 201 ---RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAH 257
+ G+++ D F +N+ + G + + + EM V P +TY ++ CA
Sbjct: 309 EMDQKGIVR--DAFTYNTYLDTLCKGGQIDLARRVLEEMSSRRVWPTVVTYSTMIDGCAK 366
Query: 258 GGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
L+++A ++ + ++ Y MV + A+ G+ EA
Sbjct: 367 ANLLEDALNLYEEMKLRSISVDRVSYNTMVGIYAKLGRFDEA 408
>IMGA|Medtr1g035010.1 Pentatricopeptide repeat
chr01_pseudomolecule_IMGAG_V3 8494444-8491286 E
EGN_Mt090430 20090702
Length = 733
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/301 (23%), Positives = 132/301 (43%), Gaps = 44/301 (14%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVF 130
+V++N+++ + G +S AR+ D+M +D++ S++ LI GY R G++ EAL +F
Sbjct: 311 TVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLF 370
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
E+R P+ VT +++ G LD + M +I + L +V T LV + +
Sbjct: 371 SELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQM 430
Query: 191 GAIQEALHVFRSGLMK-------------------------------------PSDVFIW 213
G + A +F L + P D+ +
Sbjct: 431 GNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITY 490
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
N +I G G ++ +L +M + G+ PD +TY +++ A GL+++A F + K
Sbjct: 491 NVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLK 550
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDL 330
G+ P Y ++ A G++ A ++ ++ + P AL+ G +D+
Sbjct: 551 KGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDV 610
Query: 331 A 331
A
Sbjct: 611 A 611
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/289 (23%), Positives = 134/289 (46%), Gaps = 13/289 (4%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPE 104
N+LI+ YS + A +F + KNLV ++N+++DG + G++ +A+ + D M +
Sbjct: 351 NTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIK 410
Query: 105 Q----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
DV++++ L+ G+ + G+ A +F+EM G KP+ + + + LG K
Sbjct: 411 HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIG 218
M + P L+ L++ K G +A + + ++ D + S+I
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
GL++++ ++FS+M G+ P +TY L+ + A G + A +FD + G++P
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590
Query: 279 KSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMN 324
Y ++ + + + AY ++ + P L+N N
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSN 639
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 131/309 (42%), Gaps = 46/309 (14%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVF 130
+V++N+M+D K G++ A +V D+M + + +S++ L++G KG++D A +
Sbjct: 206 TIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELI 265
Query: 131 EEMRVSGPK-----------------------------------PNEVTMVSVLCACAHL 155
E+M + G K P VT +++ + L
Sbjct: 266 EQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRL 325
Query: 156 GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFI 212
G + R +++ +L LV +L+ Y++ G EAL +F RS + PS V
Sbjct: 326 GRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS-VVT 384
Query: 213 WNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLG 272
+N++I G G + + + +M G+ PD +T+ L+ G + A FD +
Sbjct: 385 YNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEML 444
Query: 273 KNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLD 329
G+ P Y + + G ++A+ ++ + P L+NG G D
Sbjct: 445 SRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFD 504
Query: 330 LAETVGRKL 338
A + +K+
Sbjct: 505 DANELVQKM 513
>IMGA|Medtr6g089570.1 TonB box, N-terminal
chr06_pseudomolecule_IMGAG_V3 18565291-18567915 E
EGN_Mt090430 20090702
Length = 551
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 115/231 (49%), Gaps = 6/231 (2%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
++V++++++ G+ G ++ A +F+ M + DV ++S L+DG+ ++G EA V
Sbjct: 230 DVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVL 289
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M G KP+ VT S++ + ++K + + + + + + +++ + K
Sbjct: 290 AMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKI 349
Query: 191 GAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+ EA+++F+ K DV +NS+I G G + +L L EMH GV D+ITY
Sbjct: 350 KKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITY 409
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
++L A V +A + G+ P Y ++D + + G++ +A
Sbjct: 410 NSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDA 460
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 157/386 (40%), Gaps = 45/386 (11%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ D +TF L + L ++ I K GYE + +LI I A
Sbjct: 86 GIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQA 145
Query: 65 RKVFDGIPVK----NLVSWNSMLDGYAKCGDISMA----RQVFDLMPEQDVLSWSCLIDG 116
D + N V + ++++G K G S A R+V + + +V+ ++ +ID
Sbjct: 146 LHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDS 205
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ +EA ++ EM G P+ VT +++ LG L+ + + +I E+
Sbjct: 206 MCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEIN-- 263
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
DV+ ++ ++ GF G VKE+ ++ + M
Sbjct: 264 -------------------------------PDVYTFSILVDGFCKEGRVKEAKNVLAMM 292
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G+KPD +TY +L+ V +A F+ + + G+T + Y M++ + +V
Sbjct: 293 MKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKV 352
Query: 297 AEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIEL-EPHQDGRYVGL 352
EA ++ I P +L++G GK+ A + ++ + PH Y +
Sbjct: 353 DEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSI 412
Query: 353 SNVYAIFRRWDKARSMREAMERMGVK 378
+ + DKA ++ M+ G++
Sbjct: 413 LDALCKNHQVDKAIALLTKMKDEGIQ 438
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 120/260 (46%), Gaps = 14/260 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ + PD TF L + + + + K G + D SL+ Y +
Sbjct: 257 MISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQ 316
Query: 61 IPNARKVFD----GIPVKNLVSWNSMLDGYAKCGDISMARQVF------DLMPEQDVLSW 110
+ A+ +F+ G N+ S+N M++G+ K + A +F +++P DV+++
Sbjct: 317 VNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIP--DVVTY 374
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LIDG + G AL + +EM G +++T S+L A +DK + + D
Sbjct: 375 NSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKD 434
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD--VFIWNSMIGGFACHGLVKE 228
+ + T L+D K G +++A ++F L+K + V+ + MI GF + L +
Sbjct: 435 EGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDK 494
Query: 229 SLDLFSEMHIVGVKPDEITY 248
+L L S+M G P+ TY
Sbjct: 495 ALALLSKMEDNGCIPNAKTY 514
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 74/353 (20%), Positives = 139/353 (39%), Gaps = 50/353 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ PD +T+ L L K + + + D + + L+ +
Sbjct: 222 MVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGR 281
Query: 61 IPNARKVF-----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWS 111
+ A+ V GI ++V++ S++DGY ++ A+ +F+ M + +V S++
Sbjct: 282 VKEAKNVLAMMMKQGIK-PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYN 340
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
+I+G+ + DEA+ +F+EM P+ VT
Sbjct: 341 IMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVT--------------------------- 373
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKES 229
SL+D K G I AL + + P D +NS++ + V ++
Sbjct: 374 --------YNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 425
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+ L ++M G++PD TY L+ GG +K+A F+ L G Y M+
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Query: 290 MARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+A L ++ P A ++ + D+AE + R++I
Sbjct: 486 FCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMI 538
>IMGA|Medtr7g012140.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 3071850-3072725 E
EGN_Mt090430 20090702
Length = 291
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 123/244 (50%), Gaps = 8/244 (3%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALA 128
+ ++V+++S++DGY +++ A+ VF M V S++ +I+G + DEAL+
Sbjct: 42 IPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALS 101
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F+EM G P+ VT S++ LG + + + +N +P ++ SL+D+
Sbjct: 102 LFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLC 161
Query: 189 KCGAIQEALHV---FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
K I +A+ + + ++PS ++ +N +I G G +K + D+F ++ I G +
Sbjct: 162 KNHHIDKAIALVKKIKDQGIQPS-MYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNA 220
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
TY +++ GL EA + NG+ P + Y ++ + R + +A + L +
Sbjct: 221 WTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLRE 280
Query: 306 IPIQ 309
+ I+
Sbjct: 281 MIIR 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 95/212 (44%), Gaps = 5/212 (2%)
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M + P+ T ++ A G + + + M ++ + +V +SL+D Y
Sbjct: 1 MVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNE 60
Query: 193 IQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLN 250
+ +A HVF S L +N MI G +V E+L LF EM G+ PD +TY +
Sbjct: 61 VNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNS 120
Query: 251 LLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP--- 307
L+ G + AW D + NG+ Y ++DV+ + + +A + +I
Sbjct: 121 LIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQG 180
Query: 308 IQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
IQP+ L++G G+L A+ V + L+
Sbjct: 181 IQPSMYTYNILIDGLCKGGRLKNAQDVFQDLL 212
>IMGA|Medtr5g105000.1 Tetratricopeptide-like helical, related
chr05_pseudomolecule_IMGAG_V3 42145370-42145035 H
EGN_Mt090430 20090702
Length = 111
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 317 ALLNGCMNHGKLDLAETVGRKLIELEPH-QDGRYVGLSNVYAIFRRWDKARSMREAMERM 375
+LL G NHG L++ E R LIE + + G Y LSN+YA +WDK +RE M+
Sbjct: 2 SLLGGARNHGNLEIGEYAARNLIEKDSDARTGCYTVLSNMYAAAGKWDKVSHVREMMKNR 61
Query: 376 GVKKSPGYSFVEMHGALHRFVAHDKSHPSSEQIYMMLGFIVSQMK 420
GV K G S +E G LHRF+ DKSHP ++ IY L I ++K
Sbjct: 62 GVVKDAGCSIIEYKGQLHRFIVGDKSHPQTQDIYAKLREIREKLK 106
>IMGA|AC233656_8.1 Glycoside hydrolase, family 63 AC233656.1
29981-26418 E EGN_Mt090430 20090702
Length = 710
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/277 (23%), Positives = 128/277 (46%), Gaps = 12/277 (4%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQD-----VLSWSCLIDGYVRKGDYDEALAV 129
N+ + S++DG K G A ++F + + VL+++ +I GY R+ + A +
Sbjct: 249 NVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEML 308
Query: 130 FEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAK 189
M+ G PN T +++ G ++ + + + L ++V+ K
Sbjct: 309 LSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCK 368
Query: 190 CGAIQEALHVFRSGL---MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G +QEA + G +KP D F +N ++ ++++L LF++M +G++PD
Sbjct: 369 RGRVQEAYKMLEDGFQNGLKP-DKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIH 427
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQI 306
+Y L++ +KE+ FF+ + G+ P ++ Y M+ R G + A +F ++
Sbjct: 428 SYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRL 487
Query: 307 P---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
P + GA+++G K D A ++ +IE
Sbjct: 488 SDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIE 524
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/426 (21%), Positives = 179/426 (42%), Gaps = 56/426 (13%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ T ++ K ++ + E + + G + D ++ MY +I A
Sbjct: 105 GLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRGVQPDSISYRVMVVMYCKIGNILEA 164
Query: 65 RKVFD-----GIPVKNLVSWNSMLDGYAKCGDISMA----RQVFDLMPEQDVLSWSCLID 115
K G V N ++ ++ ++ G + A R++ D+ E ++++++C+I+
Sbjct: 165 DKWLSVMLERGFVVDN-ATFTLIISRFSGKGYTTRALWYFRRLVDMGLEPNLINFTCMIE 223
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG-------------- 161
G ++G +A + EEM G KPN T S++ G +K
Sbjct: 224 GLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGLCKKGWTEKAFRLFLKLVRSENHK 283
Query: 162 -------RMMHHYVIDNELPLTLVL---------------RTSLVDMYAKCGAIQEA--- 196
M+ Y +++L +L T+L+D + K G + A
Sbjct: 284 PNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDL 343
Query: 197 LHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
+++ S P ++ +N+++ G G V+E+ + + G+KPD+ TY L+S
Sbjct: 344 MNLMSSEGFSP-NLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHC 402
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL---CQIPIQPTAS 313
+++A F+ + K G+ P Y ++ V R ++ E+ F +I I PT
Sbjct: 403 KQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNK 462
Query: 314 MLGALLNGCMNHGKLDLAETVGRKLIELEPHQDGRYVG--LSNVYAIFRRWDKARSMREA 371
+++ G G L LA +L + D G +S + +R D+ARS+ ++
Sbjct: 463 TYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKR-DEARSLYDS 521
Query: 372 MERMGV 377
M G+
Sbjct: 522 MIEKGL 527
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 97/245 (39%), Gaps = 41/245 (16%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVF 130
N++++ +M+ GY + ++ A + M EQ ++ +++ LIDG+ + G+++ A +
Sbjct: 285 NVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPNTNTYTTLIDGHCKAGNFERAYDLM 344
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
M G PN T +++ G + + M N L L+ + K
Sbjct: 345 NLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLEDGFQNGLKPDKFTYNILMSEHCKQ 404
Query: 191 GAIQEALHVF-----------------------RSGLMKPSDVFI--------------W 213
I++AL +F R MK S++F +
Sbjct: 405 ENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCRENRMKESEMFFEEAVRIGIIPTNKTY 464
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
SMI G+ G + ++ F + G PD ITY ++S EA +D + +
Sbjct: 465 TSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYGAIISGLCKQSKRDEARSLYDSMIE 524
Query: 274 NGMTP 278
G+ P
Sbjct: 525 KGLVP 529
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/284 (21%), Positives = 123/284 (43%), Gaps = 21/284 (7%)
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMM-HHYVID 170
C+++ + G EA+ + EM G PN T+ ++ + +G ++ ++ +
Sbjct: 80 CMVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVR 139
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEA---LHV-FRSGLMKPSDVFIWNSMIGGFACHGLV 226
P ++ R +V MY K G I EA L V G + + F +I F+ G
Sbjct: 140 GVQPDSISYRVMVV-MYCKIGNILEADKWLSVMLERGFVVDNATF--TLIISRFSGKGYT 196
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
+L F + +G++P+ I + ++ G +K+A+ + + G P + +
Sbjct: 197 TRALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSL 256
Query: 287 VDVMARAGQVAEAYQFLCQIPI----QPTASMLGALLNGCMNHGKLDLAETVGRKLIE-- 340
+D + + G +A++ ++ +P A+++G KL+ AE + ++ E
Sbjct: 257 IDGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQG 316
Query: 341 LEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMGVKKSPGYS 384
L P+ + Y L + + KA + A + M + S G+S
Sbjct: 317 LVPNTN-TYTTLIDGHC------KAGNFERAYDLMNLMSSEGFS 353
>IMGA|Medtr7g084210.1 Pentatricopeptide repeat
chr07_pseudomolecule_IMGAG_V3 18156688-18155069 E
EGN_Mt090430 20090702
Length = 539
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 19/279 (6%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV-----SWNSMLDGYAKCGDISM 94
G E D + NS+IH + S A K+ D + V+ V ++N ++DG K G +S
Sbjct: 240 GIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSE 299
Query: 95 ARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLC 150
A V +M ++ D++S++ L++GY G EA VF++M PN ++ +++
Sbjct: 300 AYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLIN 359
Query: 151 ACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA------IQEALHVFRSGL 204
+ +D+ ++ + + L V L+D +K G + EA+ SG
Sbjct: 360 GYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRA--SG- 416
Query: 205 MKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEA 264
+P+D+ +N ++ + H ++L LF + +G+ P+ TY LL G +K A
Sbjct: 417 -QPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYA 475
Query: 265 WYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
F L G P Y M+ + + G + EA L
Sbjct: 476 KEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALL 514
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/376 (23%), Positives = 154/376 (40%), Gaps = 49/376 (13%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESD-RFVSN---------------SL 51
P +TF L A A L + ++ G I K G++ D R ++ SL
Sbjct: 103 PSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSL 162
Query: 52 IHMY--SSFR--------------DIPNARKVFDGIP-------VKNLVSWNSMLDGYAK 88
+H Y FR I R P NL+ +N+++DG K
Sbjct: 163 LHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCK 222
Query: 89 CGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP-KPNEV 143
G + A + M E DV S++ +I G+ G + A+ + +EM V G P+
Sbjct: 223 QGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVY 282
Query: 144 TMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSG 203
T ++ LG + + + +I +V +L++ Y G++ EA VF
Sbjct: 283 TFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKM 342
Query: 204 LMKPS--DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLV 261
+ + + +V + ++I G+ +V E++ L +EMH + PD +TY LL + G
Sbjct: 343 VERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402
Query: 262 KEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGAL 318
W + + +G Y ++D + + +A +Q + +I I P L
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462
Query: 319 LNGCMNHGKLDLAETV 334
L+G G+L A+ +
Sbjct: 463 LDGLCKSGRLKYAKEI 478
>IMGA|Medtr6g083270.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 16845644-16847285 E
EGN_Mt090430 20090702
Length = 505
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 108/229 (47%), Gaps = 6/229 (2%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
++V++N+++ G+ G++ AR++FD + E+ DV S++ LI GY + DEA+++F
Sbjct: 277 DIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLF 336
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
EMR + V S++ G + + + ++ P ++ L+D + K
Sbjct: 337 NEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKI 396
Query: 191 GAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
I + +F+ G V +N +I G+ ++E+++L S M + PD ITY
Sbjct: 397 QDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITY 456
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVA 297
+L G + +AW F + G Y ++D +A VA
Sbjct: 457 NSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 505
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 113/235 (48%), Gaps = 6/235 (2%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N+ ++N ++D + + G + A+ +F+LM ++ D+++++ LI G+ G+ EA +F
Sbjct: 242 NVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLF 301
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+ + G P+ + ++ +D+ + + + + L +VL +SL+D K
Sbjct: 302 DTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKS 361
Query: 191 GAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
G I A +F + P +V +N +I F + ++LF M G+ P +TY
Sbjct: 362 GRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTY 421
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
L++ ++EA + + P S Y + D + ++G++++A++
Sbjct: 422 NILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELF 476
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/397 (20%), Positives = 156/397 (39%), Gaps = 61/397 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
+L+ G P+++T + K + + + H + G D +LI+
Sbjct: 94 VLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGR 153
Query: 61 IPNARKVF---DGIPVK-NLVSWNSMLDGYAK----CGDISMARQVFDLMPEQDVLSWSC 112
+A ++ +G VK N+V +N ++D + K C + ++ D+ + D+L+++
Sbjct: 154 SIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTS 213
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G+ R G + E + EM PN T
Sbjct: 214 LIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTF--------------------------- 246
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESL 230
L+D + + G + EA +F + + D+ +N++I G HG V E+
Sbjct: 247 --------NVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEAR 298
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
LF + G+ PD +Y L+ + EA F+ + M Y+ ++D +
Sbjct: 299 KLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGL 358
Query: 291 ARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG 347
++G+++ A++ I P L++ +D+ IEL G
Sbjct: 359 CKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMG-------IELFKLMCG 411
Query: 348 RYVGLSNVYAIF----RRWDKARSMREAMERMGVKKS 380
+ GL+ + + K++ +REAM + V +S
Sbjct: 412 K--GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQS 446
>IMGA|Medtr8g112650.1 Pentatricopeptide repeat
chr08_pseudomolecule_IMGAG_V3 25407510-25409681 E
EGN_Mt090430 20090702
Length = 583
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 119/259 (45%), Gaps = 14/259 (5%)
Query: 76 LVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFE 131
L S N +L K I V+ M ++ ++ +++ I+G R G ++A E
Sbjct: 165 LTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIE 224
Query: 132 EMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+M+ G PN VT +V C G + K ++ N++ V +L+D +
Sbjct: 225 DMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFC 284
Query: 189 K---CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
K A ++A + +KP ++ +NS+I G +G ++E++DL+ +M +G+KP+
Sbjct: 285 KDENVAAAKKAFEEMQKQGLKP-NIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNI 343
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQ 305
+TY L++ ++KEA FD + K + P + M+D + G + E +
Sbjct: 344 VTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSS 403
Query: 306 I---PIQPTASMLGALLNG 321
+ I P S L+ G
Sbjct: 404 MLDEGILPNVSTYNCLIAG 422
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 146/317 (46%), Gaps = 21/317 (6%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDE---AL 127
NL ++N ++G + G ++ A + M +V++++ L+DGY ++G + A
Sbjct: 199 NLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAE 258
Query: 128 AVFEEMRVSGPKPNEVTMVSVL---CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
A +EM + PNEVT +++ C ++ A K + L +V SL+
Sbjct: 259 AFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKA---FEEMQKQGLKPNIVTYNSLI 315
Query: 185 DMYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
+ G ++EA+ ++ GL ++ +N++I GF ++KE+ +F ++ +
Sbjct: 316 NGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELV 375
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
P+ IT+ ++ A G+++E + + G+ P Y C++ + R + A +
Sbjct: 376 PNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKEL 435
Query: 303 LCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLIE--LEPHQDGRYVGLSNVYA 357
L ++ ++ L++G + K AE + ++ L+P+ Y L + Y
Sbjct: 436 LNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNH-VTYNTLMDGYC 494
Query: 358 IFRRWDKARSMREAMER 374
+ + A ++R ME+
Sbjct: 495 MEGKLKAALNVRTRMEK 511
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 120/267 (44%), Gaps = 28/267 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M + G+ P+ +T+ L K E + + + G + + N+LI+ + +
Sbjct: 299 MQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKM 358
Query: 61 IPNARKVFDGIP----VKNLVSWNSMLDGYAKCG----DISMARQVFDLMPEQDVLSWSC 112
+ A KVFD + V N++++N+M+D Y K G S+ + D +V +++C
Sbjct: 359 MKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNC 418
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHYVI 169
LI G RK D A + EM G K + VT ++ LC DK R +
Sbjct: 419 LIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKN------DKSRNAEKLL- 471
Query: 170 DNE-----LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMIGGFA 221
NE L V +L+D Y G ++ AL+V R+ + K +V +N +I G+
Sbjct: 472 -NEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNV-RTRMEKERKQPNVVTYNVLIKGYC 529
Query: 222 CHGLVKESLDLFSEMHIVGVKPDEITY 248
++ + L +EM G+ P+ TY
Sbjct: 530 KINKLEAANGLLNEMLEKGLNPNRTTY 556
>IMGA|Medtr6g089850.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 18822670-18824440 E
EGN_Mt090430 20090702
Length = 383
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 21/344 (6%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +T L K + H + G+ D+ +LIH + A +
Sbjct: 40 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 99
Query: 68 F---DGIPVK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ-------DVLSWSCLIDG 116
DG V+ N V +N+++ Y C D FDL E +V+++S LI G
Sbjct: 100 LQRVDGKLVQLNAVMYNTVI--YGMCKD-KHVNDAFDLYSEMVSKGISPNVVTYSALISG 156
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
+ G +A+ +F ++ + KP+ T ++ + +G+ + ++ +
Sbjct: 157 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 216
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRS---GLMKPSDVFIWNSMIGGFACHGLVKESLDLF 233
+V SL+D Y + A +F + G + P D+ +N +I GF V ++++LF
Sbjct: 217 VVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNP-DIRSYNILINGFCKIKKVDKAMNLF 275
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
+EMH + P+ +TY +L+ + G + A D + G+ P Y ++D + +
Sbjct: 276 NEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKT 335
Query: 294 GQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
QV +A + + IQP+ L++G G+L A +
Sbjct: 336 HQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNI 379
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/284 (22%), Positives = 121/284 (42%), Gaps = 51/284 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+ P+ +T+ L + K + + + I + D + N L+ + R
Sbjct: 138 MVSKGISPNVVTYSALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRK 197
Query: 61 IPNARKVF-----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWS 111
+ + VF GI + ++V++NS++DGY +++ A+ +F+ M + D+ S++
Sbjct: 198 MKEGKTVFAMMMKQGI-IPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYN 256
Query: 112 CLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDN 171
LI+G+ + D+A+ +F EM PN VT
Sbjct: 257 ILINGFCKIKKVDKAMNLFNEMHCKNIIPNVVTY-------------------------- 290
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVK 227
SL+D +K G I AL + G+ P ++ +NS+I V
Sbjct: 291 ---------NSLIDGLSKSGRISYALQLVDQMHDRGV--PPNILTYNSIIDALFKTHQVD 339
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCL 271
+++ L ++ G++P TY L+ GG +K+A F+ L
Sbjct: 340 KAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 383
>IMGA|Medtr3g024680.1 Chaperonin Cpn60/TCP-1
chr03_pseudomolecule_IMGAG_V3 6279027-6275140 E
EGN_Mt090430 20090702
Length = 898
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 65/313 (20%), Positives = 138/313 (44%), Gaps = 10/313 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M V VFP + L ++ K + G I K G+ + + N L+ + D
Sbjct: 85 MASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGD 144
Query: 61 IPNARKVF----DGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSC 112
A +F + + VS+N++++G K + A+++F M + + +++S
Sbjct: 145 SHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSA 204
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LIDG+ + GD +E + EEM G + + +++ G +++G+ + + ++
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMIGGFACHGLVKESL 230
+ +V + L++ K +EA + + G DV + + G + +G +++
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVM 290
+ M G +P+ +TY +++ G V +A + + K G P Y+ +V +
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Query: 291 ARAGQVAEAYQFL 303
G++ EA L
Sbjct: 385 CGVGKIDEAVDLL 397
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/420 (20%), Positives = 178/420 (42%), Gaps = 51/420 (12%)
Query: 8 PDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKV 67
P+ +TF L E G + + K G E D FV ++LI + S DI +++
Sbjct: 197 PNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKEL 256
Query: 68 FDGIPVKNL---------------------------------------VSWNSMLDGYAK 88
F+ + KN+ V++ + DG +K
Sbjct: 257 FNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSK 316
Query: 89 CGDISMARQVFDLM----PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT 144
G S A +V DLM E + ++++ +I+G ++G D+AL + E M G KP+ VT
Sbjct: 317 NGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVT 376
Query: 145 MVSVLCACAHLGALDKGRMMHHYVIDNELPLT--LVLRTSLVDMYAKCGAIQEALHVFRS 202
+++ +G +D+ + + ++ E + + ++ K ++ A V+ +
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436
Query: 203 GLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGL 260
+ + PS++ +N +I G+ G + ++L+L+ + G+ P+ TY L++ +
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496
Query: 261 VKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGA 317
+ A F+ +G P Y ++ + R V +A +Q + P
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556
Query: 318 LLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRRWDKARSMREAMERMG 376
+++G + G ++ A+ + +++ + D + L N + + D+A S+ E M G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 123/278 (44%), Gaps = 52/278 (18%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVF 130
N+ ++N +L G+ + GD A +F +M D +S++ +I+G + EA +F
Sbjct: 128 NVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELF 187
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+EM+ KPN VT ++L+D + K
Sbjct: 188 KEMKGGECKPNSVTF-----------------------------------SALIDGFCKN 212
Query: 191 GAIQEALHVF----RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEI 246
G ++E + + GL DVF+++++I GF G ++ +LF+EM V P+ +
Sbjct: 213 GDVEEGFGLLEEMEKMGL--EGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVV 270
Query: 247 TYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL--- 303
TY L++A KEA D + + P Y + D +++ G+ ++A + L
Sbjct: 271 TYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330
Query: 304 CQIPIQPTASMLGALLNGCMNHGKLDLA----ETVGRK 337
+ +P A++NG G++D A ET+ +K
Sbjct: 331 VKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKK 368
>IMGA|Medtr4g157210.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 39147151-39149374 E
EGN_Mt090430 20090702
Length = 732
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 148/350 (42%), Gaps = 59/350 (16%)
Query: 38 KAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDIS 93
K G D V ++I + ++ A K+FD + V ++V++ S++ G K G +
Sbjct: 340 KWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMV 399
Query: 94 MARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVL 149
AR++F+ M E D ++++ LIDGY + G+ EA +V +M G PN VT
Sbjct: 400 EAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTY---- 455
Query: 150 CACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAI---QEALHVFRSGLMK 206
T+L D K G I E LH ++
Sbjct: 456 -------------------------------TALADGLCKNGEIDVANELLHEMSRKGLQ 484
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
P +V+ +N+++ G G +++++ L EM + G PD ITY L+ A G + +A
Sbjct: 485 P-NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHE 543
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNG-C 322
+ + P + +++ +G + + +++ + I P A+ +L+ C
Sbjct: 544 LLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYC 603
Query: 323 MNHGKLDLAETVGRKLIELEPHQDGRYVGLSNVYAIFRRWD-KARSMREA 371
+ + E + D + SN Y I + KAR+M+EA
Sbjct: 604 IKNNMRATTEI-------YKAMHDRGVMPDSNTYNILIKGHCKARNMKEA 646
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/299 (25%), Positives = 145/299 (48%), Gaps = 27/299 (9%)
Query: 51 LIHMYSSFRDIPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ- 105
L + +F I A KVF+ P N VS N +L + G + A + M ++
Sbjct: 213 LSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRG 272
Query: 106 ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEV---TMVSVLCACAHLGALD 159
DV+S+ ++ GY R G+ D+ L + +E++ G KP+E ++ +LC + +
Sbjct: 273 NFPDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAE 332
Query: 160 KG-RMMHHYVI--DNELPLTLVLRTSLVDMYAKCGAIQEALHVF---RSGLMKPSDVFIW 213
+ R M + + DN V+ T+++ + K G + A +F R + P D+ +
Sbjct: 333 QLLRGMRKWGVFPDN------VVYTTVISGFCKLGNVSAACKLFDEMRRKKIVP-DIVTY 385
Query: 214 NSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGK 273
S+I G G + E+ ++F+EM + G++PDE+TY L+ G +KEA+ + + +
Sbjct: 386 TSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQ 445
Query: 274 NGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLD 329
G+TP Y + D + + G++ A + L ++ +QP ++NG G ++
Sbjct: 446 KGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIE 504
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/346 (20%), Positives = 146/346 (42%), Gaps = 57/346 (16%)
Query: 1 MLRVGVFPDHLTFPF----LAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYS 56
M R + PD +T+ + K+ + RE+ + G E D +LI Y
Sbjct: 373 MRRKKIVPDIVTYTSVIHGICKSGKMVEAREM----FNEMLVKGLEPDEVTYTALIDGYC 428
Query: 57 SFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVL 108
++ A V + + K N+V++ ++ DG K G+I +A ++ M + +V
Sbjct: 429 KAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVY 488
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYV 168
+++ +++G + G+ ++ + + EEM ++G P+ +T +++ A +G + K + +
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548
Query: 169 IDNELPLTLVLRTSLVDMYAKCGAIQEALHV----FRSGLMKPSDVFIWNSMIGGFACHG 224
++ L TLV L++ + G +++ + G+M + F NS++ +
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTF--NSLMKQYCIKN 606
Query: 225 LVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF----------------- 267
++ + +++ MH GV PD TY L+ +KEAW+
Sbjct: 607 NMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYD 666
Query: 268 ------------------FDCLGKNGMTPKSEHYACMVDVMARAGQ 295
F+ + K+G+ + + Y VDV G
Sbjct: 667 ALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGN 712
>IMGA|Medtr3g138450.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 35394297-35398369 E
EGN_Mt090430 20090702
Length = 1121
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 13/263 (4%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V++ +++D + K GD+ ++ ++ M DV++++ LI+ + GD D A + +
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M G PN T +++C LD+ + + + T +D Y K G
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 193 IQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+A+ F + G+M PS + N+ + A G + E+ D+F+++H G+ PD +TY
Sbjct: 461 PAKAIDTFETMKKRGIM-PS-IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTY 518
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQ 305
L+ + G + +A + G P +++ + +AG+V A++ L
Sbjct: 519 NMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKN 578
Query: 306 IPIQPTASMLGALLNGCMNHGKL 328
+ + PT LL G GK+
Sbjct: 579 LKLAPTVVTYNILLTGLGKEGKI 601
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 20/311 (6%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNL------VSWNSMLDGYAKCGDISMARQVFDLMPE 104
LI + + +A+ VFD KNL S+N ++DG A ++F+ M
Sbjct: 766 LIKVLCKRKKALDAQNVFDKF-TKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824
Query: 105 Q----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+ +++ L+D + + ++ ++ EMR G +PN +T ++ A L+K
Sbjct: 825 AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMI 217
+++ ++ + T L+D K G ++A+ +F L P+ V I+N +I
Sbjct: 885 ALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSV-IYNILI 943
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
GF G + + +LF +M G++PD +Y L+ G + EA +F+ L G+
Sbjct: 944 NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
P + Y +++ + ++ ++ EA ++ I P AL+ GK+D+A +
Sbjct: 1004 PDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKM 1063
Query: 335 GR--KLIELEP 343
+L+ LEP
Sbjct: 1064 YEELQLVGLEP 1074
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 13/305 (4%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMA 95
GY D LI D+ A + D + K NL ++N+M+ G K + A
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
Query: 96 RQVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
++ + M V S+ ID Y + GD +A+ FE M+ G P+ + L
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSD 209
A G + + + + + L V L+ Y+K G I +A + + K D
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V I NS+I G V + +F + + + P +TY LL+ G + +A F
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI---QPTASMLGALLNGCMNHG 326
+ ++G P + + ++D +++ V A + C++ + P ++ G + G
Sbjct: 610 SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669
Query: 327 KLDLA 331
++D A
Sbjct: 670 RIDYA 674
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 12/339 (3%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD +T+ L +A + + +T G + N++I R + A
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
Query: 65 RKVFDGIP---VK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS--WSCLIDGYV 118
++ + + VK S+ +D Y K GD + A F+ M ++ ++ +C Y
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489
Query: 119 --RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
G EA +F ++ G P+ VT ++ + G +DK + +I
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549
Query: 177 LVLRTSLVDMYAKCGAIQEALHVF--RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+++ SL++ K G + A +F L V +N ++ G G + ++L+LF
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
M G P+ IT+ +LL + V A F + P Y ++ + R G
Sbjct: 610 SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669
Query: 295 QVAEAYQFLCQIP--IQPTASMLGALLNGCMNHGKLDLA 331
++ A+ F Q+ + P L L+ G + HG+++ A
Sbjct: 670 RIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDA 708
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 17/311 (5%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSM 82
E L + + AG + F N L+ + + I ++ + + N ++ N +
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSC----LIDGYVRKGDYDEALAVFEEMRVSGP 138
+ K +++ A ++ + D C LIDG ++ G ++A+ +FEEM G
Sbjct: 873 ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN V ++ G +D + ++ + L T LV+ G I EA+
Sbjct: 933 GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992
Query: 199 VFR----SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
F +GL D +N +I G + E+L LFSEM G+ PD TY L+
Sbjct: 993 YFEELKLTGL--DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI---QPT 311
G V A ++ L G+ P Y ++ + +G +A+ ++ + P
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Query: 312 ASMLGALLNGC 322
L N C
Sbjct: 1111 TETFAQLPNKC 1121
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 118/297 (39%), Gaps = 16/297 (5%)
Query: 49 NSLIHMYSSFRDIPNARKVFD----GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N ++ + R I + VFD + +NL ++ ++ + G I A M E
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194
Query: 105 QDVLSWSCLIDGYVR---KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+ + +G + G +EAL V++ M G KP+ T +++ A G K
Sbjct: 195 VGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS----DVFIWNSMI 217
+ + L + T + + I +A +F+ M DV + +I
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKE--MDDEGCGPDVITYTVLI 312
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G + ++ +L+ +M PD +TY+ L+ G ++ F++ + +G
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLA 331
P Y +++ + ++G V A+ L + + P ++ G + +LD A
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
>IMGA|Medtr4g042010.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 10055950-10051878 E
EGN_Mt090430 20090702
Length = 1121
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 13/263 (4%)
Query: 77 VSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEE 132
V++ +++D + K GD+ ++ ++ M DV++++ LI+ + GD D A + +
Sbjct: 341 VTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDV 400
Query: 133 MRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGA 192
M G PN T +++C LD+ + + + T +D Y K G
Sbjct: 401 MTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGD 460
Query: 193 IQEALHVFRS----GLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+A+ F + G+M PS + N+ + A G + E+ D+F+++H G+ PD +TY
Sbjct: 461 PAKAIDTFETMKKRGIM-PS-IAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTY 518
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF---LCQ 305
L+ + G + +A + G P +++ + +AG+V A++ L
Sbjct: 519 NMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKN 578
Query: 306 IPIQPTASMLGALLNGCMNHGKL 328
+ + PT LL G GK+
Sbjct: 579 LKLAPTVVTYNILLTGLGKEGKI 601
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 143/311 (45%), Gaps = 20/311 (6%)
Query: 51 LIHMYSSFRDIPNARKVFDGIPVKNL------VSWNSMLDGYAKCGDISMARQVFDLMPE 104
LI + + +A+ VFD KNL S+N ++DG A ++F+ M
Sbjct: 766 LIKVLCKRKKALDAQNVFDKF-TKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKS 824
Query: 105 Q----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+ +++ L+D + + ++ ++ EMR G +PN +T ++ A L+K
Sbjct: 825 AGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNK 884
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMI 217
+++ ++ + T L+D K G ++A+ +F L P+ V I+N +I
Sbjct: 885 ALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSV-IYNILI 943
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
GF G + + +LF +M G++PD +Y L+ G + EA +F+ L G+
Sbjct: 944 NGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGLD 1003
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETV 334
P + Y +++ + ++ ++ EA ++ I P AL+ GK+D+A +
Sbjct: 1004 PDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVKM 1063
Query: 335 GR--KLIELEP 343
+L+ LEP
Sbjct: 1064 YEELQLVGLEP 1074
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 127/305 (41%), Gaps = 13/305 (4%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMA 95
GY D LI D+ A + D + K NL ++N+M+ G K + A
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
Query: 96 RQVFDLMPEQDV----LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
++ + M V S+ ID Y + GD +A+ FE M+ G P+ + L
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSD 209
A G + + + + + L V L+ Y+K G I +A + + K D
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549
Query: 210 VFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFD 269
V I NS+I G V + +F + + + P +TY LL+ G + +A F
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609
Query: 270 CLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI---QPTASMLGALLNGCMNHG 326
+ ++G P + + ++D +++ V A + C++ + P ++ G + G
Sbjct: 610 SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669
Query: 327 KLDLA 331
++D A
Sbjct: 670 RIDYA 674
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 75/339 (22%), Positives = 140/339 (41%), Gaps = 12/339 (3%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G PD +T+ L +A + + +T G + N++I R + A
Sbjct: 370 GYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
Query: 65 RKVFDGIP---VK-NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLS--WSCLIDGYV 118
++ + + VK S+ +D Y K GD + A F+ M ++ ++ +C Y
Sbjct: 430 LELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYT 489
Query: 119 --RKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
G EA +F ++ G P+ VT ++ + G +DK + +I
Sbjct: 490 LAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPD 549
Query: 177 LVLRTSLVDMYAKCGAIQEALHVF--RSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
+++ SL++ K G + A +F L V +N ++ G G + ++L+LF
Sbjct: 550 VMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFG 609
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
M G P+ IT+ +LL + V A F + P Y ++ + R G
Sbjct: 610 SMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREG 669
Query: 295 QVAEAYQFLCQIP--IQPTASMLGALLNGCMNHGKLDLA 331
++ A+ F Q+ + P L L+ G + HG+++ A
Sbjct: 670 RIDYAFWFFHQMKKFLSPDYVTLCTLIPGVVRHGRVEDA 708
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 125/311 (40%), Gaps = 17/311 (5%)
Query: 27 ELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVK----NLVSWNSM 82
E L + + AG + F N L+ + + I ++ + + N ++ N +
Sbjct: 813 EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872
Query: 83 LDGYAKCGDISMARQVFDLMPEQDVLSWSC----LIDGYVRKGDYDEALAVFEEMRVSGP 138
+ K +++ A ++ + D C LIDG ++ G ++A+ +FEEM G
Sbjct: 873 ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
PN V ++ G +D + ++ + L T LV+ G I EA+
Sbjct: 933 GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992
Query: 199 VFR----SGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSA 254
F +GL D +N +I G + E+L LFSEM G+ PD TY L+
Sbjct: 993 YFEELKLTGL--DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILH 1050
Query: 255 CAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPI---QPT 311
G V A ++ L G+ P Y ++ + +G +A+ ++ + P
Sbjct: 1051 LGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPN 1110
Query: 312 ASMLGALLNGC 322
L N C
Sbjct: 1111 TETFAQLPNKC 1121
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 118/297 (39%), Gaps = 16/297 (5%)
Query: 49 NSLIHMYSSFRDIPNARKVFD----GIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPE 104
N ++ + R I + VFD + +NL ++ ++ + G I A M E
Sbjct: 135 NYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTE 194
Query: 105 QDVLSWSCLIDGYVR---KGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKG 161
+ + +G + G +EAL V++ M G KP+ T +++ A G K
Sbjct: 195 VGFILNAYSYNGLIHLLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKI 254
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPS----DVFIWNSMI 217
+ + L + T + + I +A +F+ M DV + +I
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKE--MDDEGCGPDVITYTVLI 312
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
G + ++ +L+ +M PD +TY+ L+ G ++ F++ + +G
Sbjct: 313 DALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYA 372
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCMNHGKLDLA 331
P Y +++ + ++G V A+ L + + P ++ G + +LD A
Sbjct: 373 PDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEA 429
>IMGA|Medtr6g093050.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 19795614-19798108 E
EGN_Mt090430 20090702
Length = 258
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 103/193 (53%), Gaps = 21/193 (10%)
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLT 176
++++G+ ++ L E+ G + +S+L C L +L+ G+ +H ++ ++
Sbjct: 78 FLQEGNVNQVL----ELMGQGAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGN 133
Query: 177 LVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
+ L L+ +Y KCG++++A VF M +V WN MIGG+ +GL + L +F +M
Sbjct: 134 VELCNRLIGLYVKCGSVKDARKVFDK--MPDRNVGSWNLMIGGYNVNGLGIDGLLVFKQM 191
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G+ PDE T+ +L+ CA LV +G+ EHY +V++ AG++
Sbjct: 192 RQQGIVPDEETFALVLAVCA---LV------------DGVEEGMEHYLGVVNIFGCAGRL 236
Query: 297 AEAYQFLCQIPIQ 309
EA++F+ +PI+
Sbjct: 237 NEAHEFIENMPIE 249
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 93/212 (43%), Gaps = 47/212 (22%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G F D+ F L K L ELG +H ++ ++ + + + N LI +Y
Sbjct: 94 GAFADYSDFLSLLKLCEDLKSLELGKRVHEFLRRSKFGGNVELCNRLIGLY--------- 144
Query: 65 RKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRKGDYD 124
KCG + AR+VFD MP+++V SW+ +I GY G
Sbjct: 145 ----------------------VKCGSVKDARKVFDKMPDRNVGSWNLMIGGYNVNGLGI 182
Query: 125 EALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLV 184
+ L VF++MR G P+E T VL CA + +++G M HY+ +V
Sbjct: 183 DGLLVFKQMRQQGIVPDEETFALVLAVCALVDGVEEG--MEHYL-------------GVV 227
Query: 185 DMYAKCGAIQEALHVFRSGLMKPSDVFIWNSM 216
+++ G + EA H F + + V IW ++
Sbjct: 228 NIFGCAGRLNEA-HEFIENMPIEAGVEIWETL 258
>IMGA|Medtr6g069830.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 13027666-13028464 H
EGN_Mt090430 20090702
Length = 92
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 58/92 (63%)
Query: 61 IPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVLSWSCLIDGYVRK 120
+ +AR VFD ++L SWN+M+ Y G++ A+ +FD M E+DV+SWS +I GYV+
Sbjct: 1 MDDARNVFDSAIDRDLYSWNTMIGVYVGSGNMIQAKNLFDEMHERDVVSWSTIIAGYVQV 60
Query: 121 GDYDEALAVFEEMRVSGPKPNEVTMVSVLCAC 152
G + E L F M S KPNE TMVS L AC
Sbjct: 61 GCFMEDLEFFHNMLQSEVKPNEYTMVSALAAC 92
>IMGA|Medtr6g071400.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 13741003-13739330 E
EGN_Mt090430 20090702
Length = 557
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 145/326 (44%), Gaps = 24/326 (7%)
Query: 37 TKAGYESDRFVSNSLIH----MYSSFRDI----PNARKVFDGIP-------VKNLVSWNS 81
T+A E R V L+ MYS+ D N FD N+V++++
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250
Query: 82 MLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSG 137
++ G+ G + A +F+ M + DV +++ L+D + ++G EA M G
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310
Query: 138 PKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL 197
KP+ VT S++ + ++ + + + + + T+ +++ + K + +A+
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370
Query: 198 HVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
+F+ K +V +NS+I G G + +L+L MH G +PD ITY ++L A
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQP---TA 312
LV +A L G+ P Y ++D + + G++ +A + ++ T
Sbjct: 431 CKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTV 490
Query: 313 SMLGALLNGCMNHGKLDLAETVGRKL 338
+ ++ G +HG D A ++ K+
Sbjct: 491 NTYTVMIQGFCSHGLFDEALSLLSKM 516
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 121/258 (46%), Gaps = 45/258 (17%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M++ G+ PD +T+ L + + + +I ++ G + N +I+ + +
Sbjct: 306 MMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKM 365
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A K+F + K N++++NS++DG K G IS A ++ DLM ++ D++++S
Sbjct: 366 VDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSS 425
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
++D + D+A+A+ +++ G +PN M+ Y I
Sbjct: 426 ILDALCKNHLVDKAIALLIKLKDQGIRPN----------------------MYTYTI--- 460
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFI--WNSMIGGFACHGLVKESL 230
L+D K G +++A ++F L+K ++ + + MI GF HGL E+L
Sbjct: 461 ----------LIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEAL 510
Query: 231 DLFSEMHIVGVKPDEITY 248
L S+M PD ITY
Sbjct: 511 SLLSKMKDNSCIPDAITY 528
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/256 (20%), Positives = 117/256 (45%), Gaps = 9/256 (3%)
Query: 75 NLVSWNSMLDGYAKCGDI----SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVF 130
N V++N +++ + + G I S+ ++ + E D ++ + I G+ KG +AL
Sbjct: 104 NFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFH 163
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+++ G ++V+ +++ +G + V + L +V+ ++++D K
Sbjct: 164 DKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKD 223
Query: 191 GAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
+ +A ++ + + S++ ++++I GF G +K+++ LF++M + PD T+
Sbjct: 224 KNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTF 283
Query: 249 LNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP- 307
L+ A G VKEA + K G+ P Y ++D +V A L +
Sbjct: 284 NILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSH 343
Query: 308 --IQPTASMLGALLNG 321
+ T ++NG
Sbjct: 344 RGVTATVRSYNIVING 359
>IMGA|Medtr6g088920.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 18040576-18043648 E
EGN_Mt090430 20090702
Length = 457
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 142/316 (44%), Gaps = 19/316 (6%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVF---DGIPVK-NLVSWNSMLDGYAKCGDISMA 95
G+ D+ +LI+ + A ++ DG V+ ++V +N+++DG K ++ A
Sbjct: 2 GFHLDQVSYGTLINGLCKVGETKAALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDA 61
Query: 96 RQVFDLMPEQ-------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSV 148
FDL E+ DV +++ LI G+ G +A+ +F +M P+ T +
Sbjct: 62 ---FDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSIL 118
Query: 149 LCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK-- 206
+ G + + + + ++ + +V +SL+D Y + +A +F + +
Sbjct: 119 VDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGV 178
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
++V +N MI GF +V E++ LF EMH + PD ITY +L+ G + A
Sbjct: 179 TANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALE 238
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCM 323
D + G P Y ++D + + V +A L ++ I+P + L+ G
Sbjct: 239 LVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLC 298
Query: 324 NHGKLDLAETVGRKLI 339
GKL+ A V L+
Sbjct: 299 QSGKLEDARKVFEDLL 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/330 (24%), Positives = 149/330 (45%), Gaps = 34/330 (10%)
Query: 44 DRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVF 99
D F N+LI + + +A +F+ + KN++ +++ ++DG+ K G+I A+ V
Sbjct: 76 DVFTYNALISGFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVL 135
Query: 100 DLMPEQ----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCAC 152
+M +Q DV+++S L+DGY + ++A ++F M G N + M++ C
Sbjct: 136 AMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKI 195
Query: 153 AHLG-ALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHV-----FRSGLMK 206
+ A+ + MHH I P ++ +SL+D K G I AL + +R +
Sbjct: 196 KMVDEAMKLFKEMHHKQI---FP-DVITYSSLIDGLCKSGRISYALELVDEMHYRG---Q 248
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
D+ +NS++ V +++ L +++ G++PD TY L+ G +++A
Sbjct: 249 QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARK 308
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIPIQ---PTASMLGALLNGCM 323
F+ L G Y M+ G EA L ++ P A ++
Sbjct: 309 VFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLF 368
Query: 324 NHGKLDLAETVGRKL-------IELEPHQD 346
+ D+AE + R++ IEL+P D
Sbjct: 369 EKDENDMAEKLLREMIMRGLLVIELKPGFD 398
>IMGA|Medtr6g084020.1 Pentatricopeptide repeat
chr06_pseudomolecule_IMGAG_V3 17295374-17296821 E
EGN_Mt090430 20090702
Length = 430
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 148/329 (44%), Gaps = 20/329 (6%)
Query: 30 LAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVF---DGIPVK-NLVSWNSMLDG 85
L H + G++ ++ +LI + A +V DG+ V+ N+V +++++
Sbjct: 60 LHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTII-- 117
Query: 86 YAKCGDISMARQVFDLMPEQ-------DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGP 138
Y+ C D + FDL + DV++++ L+ G + G EA+ +F +M +
Sbjct: 118 YSLCKD-KLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNI 176
Query: 139 KPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALH 198
KP+ T ++ G + K R + +I + ++ SL+D Y +A
Sbjct: 177 KPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATF 236
Query: 199 VFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACA 256
VF + + DV ++ MI G +V E+++L EMH + P+ +TY +L+
Sbjct: 237 VFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLIDGLH 296
Query: 257 HGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTAS 313
G + +AW + + G Y ++D + + QV +A L +I IQP
Sbjct: 297 KSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQPDIY 356
Query: 314 MLGALLNGCMNHGKL-DLAETVGRKLIEL 341
L++G +G+L D E++ K + L
Sbjct: 357 TYTILVDGLCKNGRLKDAQESLFDKALSL 385
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/227 (22%), Positives = 103/227 (45%), Gaps = 14/227 (6%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
P + + + V+ + +++ +M + G + + V + ++C DK +
Sbjct: 4 PTPTIFEFGKIFASLVKINHFHTVISLSHQMELRGIQTDLVNLNILVCLN------DKVK 57
Query: 163 MMHHY---VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS--GLMKPSDVFIWNSMI 217
H+ VI L V +L+D K G + A+ V R+ GL+ +V +++++I
Sbjct: 58 ETLHFHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTII 117
Query: 218 GGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMT 277
LV ++ DL+S+M + + PD ITY L+ C G +KEA F+ + +
Sbjct: 118 YSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIK 177
Query: 278 PKSEHYACMVDVMARAGQVAEAYQFLCQI---PIQPTASMLGALLNG 321
P + +VD + + G++ +A L + + P +L++G
Sbjct: 178 PDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDG 224
>IMGA|AC233685_47.1 Pentatricopeptide repeat AC233685.2
215521-213896 E EGN_Mt090430 20090702
Length = 433
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 150/353 (42%), Gaps = 25/353 (7%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
G+ P+ TF L + L + ++ I K GY+ D N+L+ + A
Sbjct: 83 GIQPEMFTFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEA 142
Query: 65 RKVFDGIPVKNL----VSWNSMLDGYAKCGDISMARQVFD-----LMPEQDVLSWSCLID 115
D + K VS+ ++++G K G+ A Q+ L+ DV+ ++ +ID
Sbjct: 143 LNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIID 202
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNE---VTMVSVLCACAHLG-ALDKGRMMHHYVIDN 171
+ + A VF + + G PN M++ LC + A+ + MH + N
Sbjct: 203 SFCKD---KLAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMH---LKN 256
Query: 172 ELPLTLVLRTSLVDMYAKCGAIQEALHVFR--SGLMKPSDVFIWNSMIGGFACHGLVKES 229
P T V +SL+D K G I + + + +P+++ +NS++ G + V ++
Sbjct: 257 MTPNT-VTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKA 315
Query: 230 LDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDV 289
+ L ++M G++PD TY L+ G +K+A + L G Y M++
Sbjct: 316 IALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMING 375
Query: 290 MARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
+ + G EA L Q+ P A L++ + K A + R++I
Sbjct: 376 LCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMI 428
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 133/294 (45%), Gaps = 16/294 (5%)
Query: 93 SMARQVFDLMPEQDVLSWSCLIDGYVRKGDYDEALAVFEEM---RVSGPKPNEVTMVSVL 149
SM ++ L + D ++ + L+ G G EAL + + R + + T+++ L
Sbjct: 109 SMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGL 168
Query: 150 CACAHL-GALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK-- 206
C AL R + ++ + +++ T+++D + K + A HVF + ++
Sbjct: 169 CKSGETRAALQLLRKIEGLLL---VRPDVIMYTAIIDSFCK---DKLAKHVFNTISLRGV 222
Query: 207 PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWY 266
+V ++ MI G + +V E++ LF EMH+ + P+ +TY +L+ G + + W
Sbjct: 223 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 282
Query: 267 FFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQPTASMLGALLNGCM 323
D + G Y +++ + + QV +A L ++ IQP S L++G
Sbjct: 283 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 342
Query: 324 NHGKLDLAETVGRKLI-ELEPHQDGRYVGLSNVYAIFRRWDKARSMREAMERMG 376
+G+L A+ + + L+ + P Y + N +D+A S+ ME G
Sbjct: 343 KNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNG 396
>IMGA|Medtr4g092860.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 19508953-19507079 H
EGN_Mt090430 20090702
Length = 624
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/317 (22%), Positives = 152/317 (47%), Gaps = 16/317 (5%)
Query: 75 NLVSWNSMLDGYAKCGDISMAR------QVFDLMPEQDVLSWSCLIDGYVRKGDYDEALA 128
++V++N M++ + G A+ +V+ + P +V++++ +I+GY +G ++ A
Sbjct: 216 SIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKP--NVVTYNTVINGYCLRGKFEAASK 273
Query: 129 VFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYA 188
+F+ M+ KP+ T S + +++ + ++++ L V +L+D
Sbjct: 274 IFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCC 333
Query: 189 KCGAIQEALHVFRSGLMKP---SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDE 245
G + +A +R +M + VF +N +I ++E+ D+ EM GV+PD
Sbjct: 334 NKGDLDKAF-AYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDV 392
Query: 246 ITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQ-FLC 304
+TY ++ G K+A FD + + + P E Y ++DV + +++EA + F
Sbjct: 393 VTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKK 452
Query: 305 QIP--IQPTASMLGALLNGCMNHGKLDLAETVGRKLIELEPHQDG-RYVGLSNVYAIFRR 361
I + P M AL++G +G +D A + +++ + D + L Y R+
Sbjct: 453 SIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERK 512
Query: 362 WDKARSMREAMERMGVK 378
++A+ + + M+ G+K
Sbjct: 513 VEEAKKLLDEMKERGIK 529
Score = 82.0 bits (201), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/348 (23%), Positives = 142/348 (40%), Gaps = 53/348 (15%)
Query: 5 GVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPNA 64
GV P+ +T+ + K E I + + D + NS I R I A
Sbjct: 247 GVKPNVVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEA 306
Query: 65 R----KVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLIDG 116
K+ + V N V++N+++DG GD+ A D M + V +++ LI
Sbjct: 307 SGVLCKLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHA 366
Query: 117 YVRKGDYDEALAVFEEMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHYVIDNEL 173
+ +EA + +EMR G +P+ VT ++ C C G K + +++ +
Sbjct: 367 LFLEKRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRC---GNAKKALSLFDEMVEKNI 423
Query: 174 PLTLVLRTSLVDMYAKCGAIQEALHVFRSGL---MKPSDVFIWNSMIGGFACHG------ 224
T+ TSL+D++ K + EA F+ + M P D+ ++N++I G +G
Sbjct: 424 RPTVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLP-DIIMFNALIDGHCVNGNIDRAF 482
Query: 225 -----------------------------LVKESLDLFSEMHIVGVKPDEITYLNLLSAC 255
V+E+ L EM G+KPD I+Y L+S
Sbjct: 483 QLLKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGY 542
Query: 256 AHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFL 303
+ G +K+A FD + G P Y ++ ++ G+ A + L
Sbjct: 543 SKRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELL 590
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 140/311 (45%), Gaps = 16/311 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKREL--GLAIHGYITKAGYESDRFVSNSLIHMYSSF 58
+L G+ P+ +T+ L C K +L A + G + F N LIH
Sbjct: 313 LLESGLVPNAVTYNALI--DGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLE 370
Query: 59 RDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQD----VLSW 110
+ I A + + K ++V++N ++GY +CG+ A +FD M E++ V ++
Sbjct: 371 KRIEEAEDMIKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETY 430
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVID 170
+ LID + ++ EA F++ G P+ + +++ G +D+ + + +
Sbjct: 431 TSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDN 490
Query: 171 NELPLTLVLRTSLVDMYAKCGAIQEA---LHVFRSGLMKPSDVFIWNSMIGGFACHGLVK 227
++ V +L+ Y + ++EA L + +KP D +N++I G++ G +K
Sbjct: 491 AKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKP-DHISYNTLISGYSKRGDMK 549
Query: 228 ESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMV 287
++L++F EM +G P +TY L+ + G A + G+TP Y ++
Sbjct: 550 DALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVI 609
Query: 288 DVMARAGQVAE 298
+ M + E
Sbjct: 610 EAMKTNDDLVE 620
>IMGA|Medtr4g090110.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 18942648-18940705 H
EGN_Mt090430 20090702
Length = 647
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 32/300 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G P+ +T+ L GL + G + KA +R V+N + +F
Sbjct: 271 MFLKGCVPNEVTYNSLVH----------GLCLKGKLDKAMSLLNRMVANKCVPNDITFGT 320
Query: 61 IPNA----RKVFDGIPV----------KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ- 105
+ + + DG+ V N S++S++ G K G Q++ M E+
Sbjct: 321 LVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG 380
Query: 106 ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
+ + +S LIDG R+G DEA EM+ G PN T S++ G + K
Sbjct: 381 CKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAI 440
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGF 220
++ + DN+ V + L++ K G ++EAL V++ L + DV ++SMI GF
Sbjct: 441 LVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGF 500
Query: 221 ACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
LV++ + LF++M H ++PD +TY LL+A V A + + G P
Sbjct: 501 CNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP 560
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 134/304 (44%), Gaps = 13/304 (4%)
Query: 49 NSLIHMYSSFRDIPNARKVFDGIPVKNLV----SWNSMLDGYAKCGDISMARQVFDLMPE 104
N +I ++ A +VF G+ +N V ++++++ G G I A + D M
Sbjct: 179 NLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQV 238
Query: 105 Q----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDK 160
+ + ++++ LI +KGD A + + M + G PNEVT S++ G LDK
Sbjct: 239 EGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDK 298
Query: 161 GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIG 218
+ + ++ N+ + +LVD + K G + + V S K + F ++S+I
Sbjct: 299 AMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLIS 358
Query: 219 GFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
G G + + L+ EM G KP+ I Y L+ G EA + + G TP
Sbjct: 359 GLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 418
Query: 279 KSEHYACMVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVG 335
S Y+ ++ AG + +A ++ + L+NG +GKL A V
Sbjct: 419 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 478
Query: 336 RKLI 339
++++
Sbjct: 479 KQML 482
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/281 (22%), Positives = 130/281 (46%), Gaps = 21/281 (7%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLMPEQDVL----SWSCLIDGYVRKGDYDEALAVF 130
N +S+N ++ + G++ A +VF M +++ + ++S L+ G +G DEA+++
Sbjct: 174 NGLSFNLVIKALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLL 233
Query: 131 EEMRVSGPKPNEV---TMVSVLCACAHLGALDK--GRMMHHYVIDNELPLTLVLRTSLVD 185
+EM+V G PN V ++S LC L K M + NE V SLV
Sbjct: 234 DEMQVEGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNE-----VTYNSLVH 288
Query: 186 MYAKCGAIQEALHVFRSGLMK---PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVK 242
G + +A+ + + P+D+ + +++ GF HG + + + + G +
Sbjct: 289 GLCLKGKLDKAMSLLNRMVANKCVPNDI-TFGTLVDGFVKHGRALDGVRVLVSLEEKGYR 347
Query: 243 PDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQF 302
+E +Y +L+S G + + + + G P + Y+ ++D + R G+ EA ++
Sbjct: 348 GNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEY 407
Query: 303 LCQIPIQ---PTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
L ++ + P + +L+ G G + A V +++ +
Sbjct: 408 LIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTD 448
>IMGA|Medtr4g035920.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 8702741-8703979 H
EGN_Mt090430 20090702
Length = 412
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 133/300 (44%), Gaps = 32/300 (10%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M G P+ +T+ L GL + G + KA +R V+N + +F
Sbjct: 36 MFLKGCVPNEVTYNSLVH----------GLCLKGKLDKAMSLLNRMVANKCVPNDITFGT 85
Query: 61 IPNA----RKVFDGIPV----------KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ- 105
+ + + DG+ V N S++S++ G K G Q++ M E+
Sbjct: 86 LVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKG 145
Query: 106 ---DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGR 162
+ + +S LIDG R+G DEA EM+ G PN T S++ G + K
Sbjct: 146 CKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAI 205
Query: 163 MMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGF 220
++ + DN+ V + L++ K G ++EAL V++ L + DV ++SMI GF
Sbjct: 206 LVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGF 265
Query: 221 ACHGLVKESLDLFSEM--HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
LV++ + LF++M H ++PD +TY LL+A V A + + G P
Sbjct: 266 CNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDP 325
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 105/237 (44%), Gaps = 5/237 (2%)
Query: 108 LSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHY 167
++++ LI +KGD A + + M + G PNEVT S++ G LDK + +
Sbjct: 11 VAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNR 70
Query: 168 VIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGL 225
++ N+ + +LVD + K G + + V S K + F ++S+I G G
Sbjct: 71 MVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGK 130
Query: 226 VKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYAC 285
+ + L+ EM G KP+ I Y L+ G EA + + G TP S Y+
Sbjct: 131 GEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSS 190
Query: 286 MVDVMARAGQVAEA---YQFLCQIPIQPTASMLGALLNGCMNHGKLDLAETVGRKLI 339
++ AG + +A ++ + L+NG +GKL A V ++++
Sbjct: 191 LMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQML 247
>IMGA|Medtr4g132700.1 Pentatricopeptide repeat
chr04_pseudomolecule_IMGAG_V3 31604339-31602561 H
EGN_Mt090430 20090702
Length = 592
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 164/383 (42%), Gaps = 54/383 (14%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIH--GYITKAGYESDR----FVSNSLIHM 54
ML++G+ P +TF L +K ++G A+ ++ K GY SD + N L M
Sbjct: 137 MLKLGLEPSVVTFTILINGLC--VKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKM 194
Query: 55 YSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMP----EQDVLSW 110
+ + RK+ + N+V +++++DG K G +S A + M + +++++
Sbjct: 195 GKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTY 254
Query: 111 SCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTM---VSVLC-------ACAHLG---- 156
+CLI G G + EA ++ +EM G P+ ++ V VLC A + +G
Sbjct: 255 TCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMIL 314
Query: 157 ------ALDKGRMMHHYVIDNE----------------LPLTLVLRTSLVDMYAKCGAIQ 194
++ Y + N+ LP +V TSL+ + K I
Sbjct: 315 VGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLP-DIVAYTSLIHGWCKIKNIN 373
Query: 195 EALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLL 252
+A+H+ + DV W ++IGGF G + +LF MH G P+ T +L
Sbjct: 374 KAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIIL 433
Query: 253 SACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEAYQFLCQIP---IQ 309
L+ EA F + K+ + Y+ ++D M AG++ A + +P +Q
Sbjct: 434 DGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQ 493
Query: 310 PTASMLGALLNGCMNHGKLDLAE 332
++NG G LD AE
Sbjct: 494 INVYAYTIMINGFAKQGLLDKAE 516
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/315 (22%), Positives = 134/315 (42%), Gaps = 49/315 (15%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+++GV PD + L K ++ G++ G D F NSLI Y
Sbjct: 277 MMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQ 336
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPE----QDVLSWSC 112
+ A +VF+ + + ++V++ S++ G+ K +I+ A + D M + DV++W+
Sbjct: 337 MDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTT 396
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI G+ + G A +F M G PN L CA
Sbjct: 397 LIGGFCQVGRPLAAKELFLNMHKYGQVPN-------LQTCA------------------- 430
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSD----VFIWNSMIGGFACHGLVKE 228
++D K + EAL +F + M+ S+ + I++ ++ G G +
Sbjct: 431 ---------IILDGLCKSQLLSEALSLFHA--MEKSNLDLNIVIYSIILDGMCSAGKLNT 479
Query: 229 SLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVD 288
+L+LFS + G++ + Y +++ A GL+ +A + +NG P S Y V
Sbjct: 480 ALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQ 539
Query: 289 VMARAGQVAEAYQFL 303
+ ++A + ++L
Sbjct: 540 GLVAEREIARSIKYL 554
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 139/333 (41%), Gaps = 19/333 (5%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRDIPN 63
+G+ PD + + L G ++ G + K G E LI+ D+
Sbjct: 105 LGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGR 164
Query: 64 ARKVFDGIPV----KNLVSWNSMLDGYAKCGDISMARQVFDLMPEQD----VLSWSCLID 115
A ++ D + ++ ++ +++G K G S A M E++ V+ +S ++D
Sbjct: 165 AVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMD 224
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGAL-DKGRMMHHYVIDNELP 174
G + G EAL + EM G KPN VT ++ + G + G ++ + +P
Sbjct: 225 GLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMP 284
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHV--FRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
L LVD+ K G I +A V F + + DVF +NS+I + + E+ +
Sbjct: 285 DLQSLNI-LVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRV 343
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
F M G PD + Y +L+ + +A + D + K G TP + ++ +
Sbjct: 344 FELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQ 403
Query: 293 AGQVAEAYQFLC------QIP-IQPTASMLGAL 318
G+ A + Q+P +Q A +L L
Sbjct: 404 VGRPLAAKELFLNMHKYGQVPNLQTCAIILDGL 436
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 104/235 (44%), Gaps = 38/235 (16%)
Query: 103 PEQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVS-GPKPNEVTMVSVLCACAHLGALDKG 161
P V+ ++ L+ V+ Y A+++ +EM S G KP+ + V+ + HL + G
Sbjct: 71 PLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFG 130
Query: 162 RMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEAL----HVFRSG-------------- 203
+ ++ L ++V T L++ G + A+ HV ++G
Sbjct: 131 FSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLING 190
Query: 204 ---LMKPS----------------DVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPD 244
+ K S +V ++++++ G GLV E+L L EM G+KP+
Sbjct: 191 LCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPN 250
Query: 245 EITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQVAEA 299
+TY L+ + G KEA D + K G+ P + +VDV+ + G++ +A
Sbjct: 251 LVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQA 305
>IMGA|Medtr3g117400.1 Pentatricopeptide repeat
chr03_pseudomolecule_IMGAG_V3 29564928-29563145 E
EGN_Mt090430 20090702
Length = 399
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 121/269 (44%), Gaps = 10/269 (3%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
M+ G+FP+ TF L A K + + + + K G + + +++ Y
Sbjct: 100 MIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQ 159
Query: 61 IPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSC 112
+ A +F+ + + N+ +N +++G K + A +F M DV++++
Sbjct: 160 VNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNI 219
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LIDG + G +L + +EMR G + +T S+L A LD+ + + D
Sbjct: 220 LIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQG 279
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIW--NSMIGGFACHGLVKESL 230
+ + T+L+D K G +++A +F+ L + + +W N MI G GL E+L
Sbjct: 280 IQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEAL 339
Query: 231 DLFSEMHIVGVKPDEITYLNLLSACAHGG 259
L S M PD ++Y ++ A + G
Sbjct: 340 ALLSRMEDNACIPDAVSYETIIYALSEKG 368
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/341 (21%), Positives = 146/341 (42%), Gaps = 16/341 (4%)
Query: 4 VGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDR----FVSNSLIHMYSSFR 59
+G P+ +TF L K + L H ++ G++ D+ + N L M +
Sbjct: 1 MGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRA 60
Query: 60 DIPNARKVFDGIPVKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLID 115
+ RK + V V +++++D K ++ A +++ M + +V ++S L+D
Sbjct: 61 AMQMLRKTWVNADV---VMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVD 117
Query: 116 GYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPL 175
+ +A+ + M G KPN VT +++ + ++K + + ++ +
Sbjct: 118 ALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEP 177
Query: 176 TLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP--SDVFIWNSMIGGFACHGLVKESLDLF 233
+ +++ K + EA+++F+ K DV +N +I G G + SL+L
Sbjct: 178 NVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELV 237
Query: 234 SEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARA 293
EM +G D ITY +LL A + +A + G+ P Y ++D + +
Sbjct: 238 DEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKD 297
Query: 294 GQVAEAYQFLCQIPIQP---TASMLGALLNGCMNHGKLDLA 331
G++ +AY +I + T ++NG G D A
Sbjct: 298 GRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEA 338
>IMGA|Medtr2g041460.1 Pentatricopeptide repeat
chr02_pseudomolecule_IMGAG_V3 11377236-11374342 E
EGN_Mt090430 20090702
Length = 849
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 118/310 (38%), Gaps = 52/310 (16%)
Query: 40 GYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKN----LVSWNSMLDGYAKCGDISMA 95
G E D F ++I + AR+ FD + + ++NSML + K G + A
Sbjct: 303 GLEFDEFTCTTVISACGREGILDEARRFFDDLKLNGYKPGTATYNSMLQVFGKAGVYTEA 362
Query: 96 RQVFDLMP----EQDVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCA 151
+ M E D ++++ L+ YVR G +DE AV + M G PN +T +V+ A
Sbjct: 363 LNILKEMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINA 422
Query: 152 CAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKP---- 207
Y K G +AL VF G MK
Sbjct: 423 -----------------------------------YGKAGDADKALEVF--GQMKELGCV 445
Query: 208 SDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYF 267
+V +N+++ ++ + + +M + G PD IT+ +L+ C G K
Sbjct: 446 PNVCTYNNVLVLLGKRSRSEDMIKILCDMKLNGCPPDRITWNTMLAVCGEKGKQKFVSQV 505
Query: 268 FDCLGKNGMTPKSEHYACMVDVMARAGQ---VAEAYQFLCQIPIQPTASMLGALLNGCMN 324
+ G P E + ++ R G VA+ Y + P + ALLN
Sbjct: 506 LREMKNCGFEPDKETFNTLISAYGRCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALAR 565
Query: 325 HGKLDLAETV 334
G AE+V
Sbjct: 566 RGNWKAAESV 575
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 118/276 (42%), Gaps = 48/276 (17%)
Query: 64 ARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSCLID 115
A K+FD IPV+ ++ + ++L YA+ G A ++F+ M E +++++ ++D
Sbjct: 221 ASKLFDIIPVEEYSLDVKACTTVLHAYARTGKYKRAIEIFEKMKETGLDPTLVTYNVMLD 280
Query: 116 GYVRKGD-YDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELP 174
Y + G + L + +EMR G + +E T +V+ AC G LD+ R +
Sbjct: 281 VYGKMGRAWSMILELLDEMRSKGLEFDEFTCTTVISACGREGILDEARRFFDDL------ 334
Query: 175 LTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDLFS 234
L+ ++ G +NSM+ F G+ E+L++
Sbjct: 335 ---------------------KLNGYKPG------TATYNSMLQVFGKAGVYTEALNILK 367
Query: 235 EMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAG 294
EM +PD ITY L++A G E D + G+ P + Y +++ +AG
Sbjct: 368 EMEDNNCEPDAITYNELVAAYVRAGFHDEGAAVIDTMASKGVMPNAITYTTVINAYGKAG 427
Query: 295 QVAEAYQFLCQIPIQPTASMLGALLNGCMNHGKLDL 330
+A + Q+ LG + N C + L L
Sbjct: 428 DADKALEVFGQM------KELGCVPNVCTYNNVLVL 457
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 84/320 (26%), Positives = 146/320 (45%), Gaps = 18/320 (5%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLA-IHGYITKAGYESDRFVSNSLIHMYSSFR 59
M G PD TF L A E+ +A ++G + AG+ N+L++ +
Sbjct: 509 MKNCGFEPDKETFNTLISAYG-RCGSEVDVAKMYGEMVAAGFTPCITTYNALLNALARRG 567
Query: 60 DIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDI----SMARQVFD--LMPEQDVLS 109
+ A V + K N S++ +L Y+K G++ + +++D + P +L
Sbjct: 568 NWKAAESVVLDMRKKGFKPNETSYSLLLHCYSKAGNVRGLEKVEMEIYDGHVFPSWMLLR 627
Query: 110 WSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVI 169
L + R+ E F +++ +G K + V + S+L L+K M +
Sbjct: 628 TLVLTNYKCRQLKGMER--AFHQLQNNGYKLDMVVINSMLSMFVRNQKLEKAHEMLDVIH 685
Query: 170 DNELPLTLVLRTSLVDMYAK---CGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLV 226
+ L LV SL+D+YA+ C +E L ++ + P DV +N++I GF GLV
Sbjct: 686 VSGLQPNLVTYNSLIDLYARVGDCWKAEEMLKDIQNSGISP-DVVSYNTVIKGFCKKGLV 744
Query: 227 KESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACM 286
+E++ + SEM GV+P IT+ +S A GL EA + ++G P Y +
Sbjct: 745 QEAIRILSEMTANGVQPCPITFNTFMSCYAGNGLFAEADEVIRYMIEHGCMPNELTYKIV 804
Query: 287 VDVMARAGQVAEAYQFLCQI 306
+D +A + EA F+ +I
Sbjct: 805 IDGYIKAKKHKEAMDFVSKI 824
>IMGA|Medtr5g007390.1 Pentatricopeptide repeat
chr05_pseudomolecule_IMGAG_V3 1084076-1088286 H
EGN_Mt090430 20090702
Length = 1084
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 95/201 (47%), Gaps = 6/201 (2%)
Query: 75 NLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVLSWSCLIDGYVRKGDYDEALAVF 130
N++++ +++DG K + A ++ D M E + + + +IDG+ + G +A VF
Sbjct: 615 NVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVF 674
Query: 131 EEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKC 190
+M G PN T S + LD + +++N +V+ T +VD K
Sbjct: 675 TKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKI 734
Query: 191 GAIQEALHVFRSGLMK--PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITY 248
G EA + K +V + +MI GF G +++ L+LF +M G P+ ITY
Sbjct: 735 GKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITY 794
Query: 249 LNLLSACAHGGLVKEAWYFFD 269
L++ C GL+ EA+ D
Sbjct: 795 RVLINHCCSNGLLDEAYKLLD 815
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/369 (21%), Positives = 153/369 (41%), Gaps = 47/369 (12%)
Query: 1 MLRVGVFPDHLTFP----FLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYS 56
M+ G PD T+ FL AS K E ++ + + G + LI +
Sbjct: 451 MMGKGFVPDDSTYSKVIGFLCDAS----KVEKAFSLFEEMKRNGIVPSVYTYTILIDSFC 506
Query: 57 SFRDIPNARKVFDGIPVK----NLVSWNSMLDGYAKCGDISMARQVFDLM----PEQDVL 108
I ARK FD + K N+V++ +++ Y K + +A ++F++M + +V+
Sbjct: 507 KAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVV 566
Query: 109 SWSCLIDGYVRKGDYDEALAVFEEMR----------------VSGPKPNEVT---MVSVL 149
+++ LIDG+ + G ++A ++ MR + PN +T +V L
Sbjct: 567 TYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGL 626
Query: 150 CACAHLGALDK--GRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMK- 206
C + + M+ H N+ ++ +++D + K G +Q+A VF +
Sbjct: 627 CKANRVKEAHELLDTMLAHGCEPNQ-----IVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681
Query: 207 -PSDVFIWNSMIGGFACHGLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAW 265
+++ ++S I + L + S+M P+ + Y ++ G EA+
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741
Query: 266 YFFDCLGKNGMTPKSEHYACMVDVMARAG---QVAEAYQFLCQIPIQPTASMLGALLNGC 322
+ + G P Y M+D ++G Q E ++ +C P L+N C
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801
Query: 323 MNHGKLDLA 331
++G LD A
Sbjct: 802 CSNGLLDEA 810
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/278 (21%), Positives = 122/278 (43%), Gaps = 23/278 (8%)
Query: 73 VKNLVSWNSMLDGYAKCGDISMARQVFDLM------PEQDVLSWSCLIDGYVRKGDYDEA 126
+ N+V++ +L G + G + +++ +M P +++ ++ LI Y + DY A
Sbjct: 311 IPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREI--FNSLIHAYCKSRDYSYA 368
Query: 127 LAVFEEMRVSGPKPNEVT---MVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSL 183
+F++M G +P + + +C+ + D ++ L L +VL
Sbjct: 369 YKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEK-AYSEMLDLGVVLNKVN 427
Query: 184 VDMYAKC----GAIQEALHVFRSGLMK---PSDVFIWNSMIGGFACHGLVKESLDLFSEM 236
V +A+C G +A + + K P D ++ +IG V+++ LF EM
Sbjct: 428 VSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDS-TYSKVIGFLCDASKVEKAFSLFEEM 486
Query: 237 HIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMARAGQV 296
G+ P TY L+ + GL+++A +FD + G TP Y ++ +A Q+
Sbjct: 487 KRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQM 546
Query: 297 A---EAYQFLCQIPIQPTASMLGALLNGCMNHGKLDLA 331
E ++ + +P AL++G G+++ A
Sbjct: 547 PVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKA 584
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/351 (19%), Positives = 146/351 (41%), Gaps = 28/351 (7%)
Query: 1 MLRVGVFPDHLTFPFLAKASACLLKRELGLAIHGYITKAGYESDRFVSNSLIHMYSSFRD 60
ML +GV + + A+ K + I + G+ D + +I
Sbjct: 416 MLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASK 475
Query: 61 IPNARKVFDGIP----VKNLVSWNSMLDGYAKCGDISMARQVFDLMPEQ----DVLSWSC 112
+ A +F+ + V ++ ++ ++D + K G I AR+ FD M + +V++++
Sbjct: 476 VEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTA 535
Query: 113 LIDGYVRKGDYDEALAVFEEMRVSGPKPNEVTMVSVLCACAHLGALDKGRMMHHYVIDNE 172
LI Y++ A +FE M + G KPN VT +++ G ++K ++ + +
Sbjct: 536 LIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGD- 594
Query: 173 LPLTLVLRTSLVDMYAKCGAIQEALHVFRSGLMKPSDVFIWNSMIGGFACHGLVKESLDL 232
+ +S +D Y K + +V + +++ G VKE+ +L
Sbjct: 595 ------IESSDMDKYFK----------LDHNNCEGPNVITYGALVDGLCKANRVKEAHEL 638
Query: 233 FSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTPKSEHYACMVDVMAR 292
M G +P++I Y ++ G +++A F + + G +P Y+ +D + +
Sbjct: 639 LDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFK 698
Query: 293 AGQVAEAYQFLCQI---PIQPTASMLGALLNGCMNHGKLDLAETVGRKLIE 340
++ + L ++ P + +++G GK D A + K+ E
Sbjct: 699 DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEE 749
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/325 (19%), Positives = 122/325 (37%), Gaps = 61/325 (18%)
Query: 34 GYITKAGYESDRFVSNSLIHMYSSFRDIPNARKVFDGIPVKNLVSWNSMLDGYA-KCGDI 92
G + GY+ + N+LI ++ + A V + ++S+ ++D Y C
Sbjct: 200 GRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLV-----KREMLSYAFVMDRYTLSCFAY 254
Query: 93 SMA-----RQVFDLMPEQ-----DVLSWSCLIDGYVRKGDYDEALAVFEEMRVSGPKPNE 142
S+ R+ FDL+ E D + ++ ++ G ++EA+ + MR S PN
Sbjct: 255 SLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNV 314
Query: 143 VTMVSVLCACAHLGALDKGRMMHHYVIDNELPLTLVLRTSLVDMYAKCGAIQEALHVFRS 202
VT +L C G L + + + +I + SL+ Y K A +F+
Sbjct: 315 VTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKK 374
Query: 203 GL---MKPSDVFIWNSMIGGFACH------------------------------------ 223
+ +P ++N IG +
Sbjct: 375 MIKCGCQPG-YLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFAR 433
Query: 224 -----GLVKESLDLFSEMHIVGVKPDEITYLNLLSACAHGGLVKEAWYFFDCLGKNGMTP 278
G ++ + EM G PD+ TY ++ V++A+ F+ + +NG+ P
Sbjct: 434 CLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVP 493
Query: 279 KSEHYACMVDVMARAGQVAEAYQFL 303
Y ++D +AG + +A ++
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWF 518