Jatropha Genome Database

JcCA0044231.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0044231.10 + phase: 2 /partial
         (171 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g046070.1 Transcription factor, MADS-box; Transcripti...   117   3e-27
IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcripti...    57   5e-09
IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcripti...    53   6e-08
IMGA|Medtr5g021220.1 Transcription factor, MADS-box; Transcripti...    53   6e-08
IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcripti...    52   2e-07
IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcripti...    50   4e-07
IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcripti...    48   2e-06
IMGA|Medtr5g032500.1 Transcription factor, K-box chr05_pseudomol...    47   4e-06
IMGA|Medtr7g083450.1 Transcription factor, K-box chr07_pseudomol...    47   4e-06
IMGA|Medtr5g032500.2 Transcription factor, K-box chr05_pseudomol...    47   5e-06
IMGA|Medtr5g075960.1 Transcription factor, K-box chr05_pseudomol...    47   6e-06
IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcripti...    46   7e-06

>IMGA|Medtr1g046070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr01_pseudomolecule_IMGAG_V3
           10653449-10650286 E EGN_Mt090430 20090702
          Length = 232

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 74/175 (42%), Positives = 111/175 (63%), Gaps = 26/175 (14%)

Query: 1   MKQIIERYQKLRGNSI-PEHDSLREH-----LYGELAMLRKETCRLQLNLQLYRGEDMSS 54
           M QIIERY++  G  I  EHD  + H     ++ ++AMLR+E+ RL+L +Q Y G+DM  
Sbjct: 64  MDQIIERYERSTGKRIMAEHDDHQIHPRELEMFHDMAMLRQESLRLELGIQRYLGDDMKD 123

Query: 55  ISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAM 114
           + F+DL ++E +LE S+AK+RNR+NEL+QQQ++NL++KER+L++EN N+  W        
Sbjct: 124 LQFDDLSKIEHELEISLAKVRNRQNELMQQQMENLQRKERILQDENMNLSNW-------- 175

Query: 115 EYHQVTIEAKPAEHQQVLEQFPFC-GEP-SSLLQLAIIPSQIQSYHLQLAQPNLQ 167
             H+  +E K      V++QF F   +P S +LQLA   + +  Y LQL QP  Q
Sbjct: 176 -EHKAVMENKA-----VMDQFAFFEDQPLSRILQLA---APVNPY-LQLGQPVFQ 220


>IMGA|Medtr7g014850.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3615380-3622271 E EGN_Mt090430 20090702
          Length = 256

 Score = 56.6 bits (135), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 69/124 (55%), Gaps = 1/124 (0%)

Query: 1   MKQIIERYQKLRGNSIP-EHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFED 59
           M+ I+ERY++     +    +  + +   E   L  +   L+ NL+ + G D+  +S ++
Sbjct: 63  MEDILERYERQNHTELTGATNETQGNWSFEYMKLTAKVQVLERNLRNFVGNDLDPLSVKE 122

Query: 60  LGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYHQV 119
           L  LEQ+L++S+ +IR RKN+++ Q +  L K+ R L+E+N  + +  + ++   E+ Q 
Sbjct: 123 LQSLEQQLDTSLKRIRTRKNQVMNQSISELHKRARTLQEQNNKLAKTKEKEKTVSEHPQR 182

Query: 120 TIEA 123
            +E 
Sbjct: 183 CLET 186


>IMGA|Medtr8g077590.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr08_pseudomolecule_IMGAG_V3
           15487044-15481223 E EGN_Mt090430 20090702
          Length = 240

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/103 (32%), Positives = 66/103 (64%), Gaps = 3/103 (2%)

Query: 1   MKQIIERYQKLR--GNSIPEHDSLREHLYG-ELAMLRKETCRLQLNLQLYRGEDMSSISF 57
           M++I+ERY++       +  +DS  +  +  E   L+ +   LQ N + Y GED+ S+S 
Sbjct: 63  MEKILERYERYSYAERQLVANDSESQGNWTIEYTRLKAKIDLLQRNYRHYMGEDLGSMSL 122

Query: 58  EDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
           ++L  LEQ+L++++  IR R+N+++ + +  L+KKE++++E+N
Sbjct: 123 KELQSLEQQLDTALKLIRTRRNQVMYESISELQKKEKVIQEQN 165


>IMGA|Medtr5g021220.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           8062970-8064886 F EGN_Mt090430 20090702
          Length = 231

 Score = 53.1 bits (126), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 16/111 (14%)

Query: 2   KQIIERYQKLRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYR---------GEDM 52
           K+II++YQK  G+     D  R H    L  L+K      +N +L R         G ++
Sbjct: 65  KKIIDQYQKTLGDI----DLWRSHYEKMLENLKKLK---DINHKLRRQIRHRIGEGGMEL 117

Query: 53  SSISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNI 103
             +SF+ L  LE+ + SS+AKIR RK  +++ + D  RKK R LE+ NGN+
Sbjct: 118 DDLSFQQLRSLEEDMNSSIAKIRERKFHVIKTRTDTCRKKVRSLEQMNGNL 168


>IMGA|Medtr1g129880.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr01_pseudomolecule_IMGAG_V3
           29094866-29091202 E EGN_Mt090430 20090702
          Length = 239

 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 12/140 (8%)

Query: 1   MKQIIERYQKLRGNSIPEHDSLREH----LYGELAMLRKETCRLQLNLQLYRGEDMSSIS 56
           + +IIE+Y++   N++ E+  L EH    LY EL MLR +   L    + + GE+++++S
Sbjct: 62  LNKIIEKYRQCCFNNMSENGYLGEHESQGLYQELLMLRVKHESLARTQRNFLGEEINALS 121

Query: 57  FEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWI----QDQRV 112
            +DL  LE++LE ++A+ R  + + L +++D LR++   +EE N  +   I     D  +
Sbjct: 122 IKDLQSLEKQLERTLAQARKHQMQKLMERVDELREEVHKVEEVNKELESKICDNSTDSTI 181

Query: 113 AMEYHQVT----IEAKPAEH 128
           +   + +T     +A P EH
Sbjct: 182 SSNNNIITNLLDAQANPFEH 201


>IMGA|Medtr5g049070.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr05_pseudomolecule_IMGAG_V3
           20888794-20881921 E EGN_Mt090430 20090702
          Length = 301

 Score = 50.4 bits (119), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 69/117 (58%), Gaps = 11/117 (9%)

Query: 1   MKQIIERYQK-------LRGNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMS 53
           M+QI+ER+++       L GN        +E+   E   L+ +   LQ N + Y GE++ 
Sbjct: 63  MEQILERHERYGYAERLLVGNDT----DTQENWTMEYTRLKAKVELLQRNHRHYMGEELD 118

Query: 54  SISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQ 110
           S+S ++L  LEQ+L++ +  IR RK +++ + +  L+KKE+ ++E+N  + + I+++
Sbjct: 119 SMSLKELQCLEQQLDTGLKNIRTRKTQVMYEAISELQKKEKGIQEQNNMLSKEIKEK 175


>IMGA|Medtr4g136380.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr04_pseudomolecule_IMGAG_V3
           33294099-33299967 E EGN_Mt090430 20090702
          Length = 251

 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 3/103 (2%)

Query: 1   MKQIIERYQKLRGNSI---PEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISF 57
           +K  IERY+K   +S       +S  ++   E A LR +   LQ + +   GE +S+++ 
Sbjct: 85  VKASIERYKKACSDSSGAKSASESNVQYYQQEAAKLRVQISNLQNHNRQMMGESLSNMNG 144

Query: 58  EDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
           +DL  LE KLE  +++IR++KNE+L  +L+ ++K+E  L   N
Sbjct: 145 KDLRNLESKLEKGISRIRSKKNEMLFAELEYMQKREVELHNSN 187


>IMGA|Medtr5g032500.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
           EGN_Mt090430 20090702
          Length = 183

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 41/160 (25%), Positives = 80/160 (50%), Gaps = 11/160 (6%)

Query: 1   MKQIIERYQKLRGNS-IPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFED 59
           MK +IERY   + +  +   +S  +    E  +LR++   LQ N +   GE +  +S  +
Sbjct: 6   MKSVIERYNICKEDQQVTNPESEVKFWQREADILRQQLQSLQENHRQLMGEQLYGLSIRN 65

Query: 60  LGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWI-----QDQRVAM 114
           L +LE +LE S+  +R +K ++L  ++  L +K  ++ +EN  +Y+ +     ++ ++  
Sbjct: 66  LQDLESQLELSLQGVRMKKEKILTDEIQELNRKGSIIHQENVELYKKVNLLQQENTQLHK 125

Query: 115 EYHQVTIEAKPAEHQQVLEQFPFC----GE-PSSLLQLAI 149
           + +  T     A  +    QFP+     GE P +L QL +
Sbjct: 126 KVYGTTDNEATATSKNAFVQFPYSVRGGGEYPQTLFQLQL 165


>IMGA|Medtr7g083450.1 Transcription factor, K-box
           chr07_pseudomolecule_IMGAG_V3 17811872-17810220 F
           EGN_Mt090430 20090702
          Length = 115

 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 39/57 (68%)

Query: 49  GEDMSSISFEDLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYR 105
           GE + S S ++L ++EQ+LE SV+ +R RKN+  + Q+D L++KE+ L  EN  + +
Sbjct: 16  GEGLGSCSLDELQQIEQQLEKSVSVVRARKNQAYKHQIDQLKEKEKNLVAENARLSK 72


>IMGA|Medtr5g032500.2 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 13163679-13160585 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 47.0 bits (110), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 15/155 (9%)

Query: 1   MKQIIERYQKLRGNS-IPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFED 59
           MK +IERY   + +  +   +S  +    E  +LR++   LQ N +   GE +  +S  +
Sbjct: 6   MKSVIERYNICKEDQQVTNPESEVKFWQREADILRQQLQSLQENHRQLMGEQLYGLSIRN 65

Query: 60  LGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWIQDQRVAMEYHQV 119
           L +LE +LE S+  +R +K ++L  ++  L +K  ++ +EN  +Y+ +         +  
Sbjct: 66  LQDLESQLELSLQGVRMKKEKILTDEIQELNRKGSIIHQENVELYKKV---------YGT 116

Query: 120 TIEAKPAEHQQVLEQFPFC----GE-PSSLLQLAI 149
           T     A  +    QFP+     GE P +L QL +
Sbjct: 117 TDNEATATSKNAFVQFPYSVRGGGEYPQTLFQLQL 151


>IMGA|Medtr5g075960.1 Transcription factor, K-box
           chr05_pseudomolecule_IMGAG_V3 27711235-27721420 E
           EGN_Mt090430 20090702
          Length = 169

 Score = 46.6 bits (109), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/109 (29%), Positives = 61/109 (55%), Gaps = 2/109 (1%)

Query: 1   MKQIIERYQKLR--GNSIPEHDSLREHLYGELAMLRKETCRLQLNLQLYRGEDMSSISFE 58
           M+ +I+RY K +   N +    S  +    E AMLR++   LQ + +   GE++S ++ +
Sbjct: 6   MRSVIDRYNKTKEEHNQLGSSTSEIKFWQREAAMLRQQLHNLQESHRQIMGEELSGLTVK 65

Query: 59  DLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEENGNIYRWI 107
           +L  LE +LE S+  +R +K +L   ++  L +K  ++ +EN  +YR +
Sbjct: 66  ELQGLENQLEISLRGVRMKKEQLFMDEIQELNRKGDIIHQENVELYRKV 114


>IMGA|Medtr7g014840.1 Transcription factor, MADS-box; Transcription
           factor, K-box chr07_pseudomolecule_IMGAG_V3
           3593718-3599199 E EGN_Mt090430 20090702
          Length = 245

 Score = 46.2 bits (108), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 57/102 (55%), Gaps = 2/102 (1%)

Query: 1   MKQIIERYQKLRGNSIPEHDSLRE--HLYGELAMLRKETCRLQLNLQLYRGEDMSSISFE 58
           M + ++RYQK    ++      +E    Y E   L++    LQ   +   GED+  +S +
Sbjct: 63  MLKTLDRYQKCSYGAVEVSKPAKELESSYREYLKLKQRFENLQRAQRNLLGEDLGPLSSK 122

Query: 59  DLGELEQKLESSVAKIRNRKNELLQQQLDNLRKKERMLEEEN 100
           DL +LE++L+SS+ ++R+ K + +  QL +L+ KE ML E N
Sbjct: 123 DLEQLERQLDSSLKQVRSTKTQFMLDQLADLQNKEHMLVEAN 164