Jatropha Genome Database
- JcCA0043871.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0043871.20 + phase: 0 /TE
(1329 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidy... 427 e-119
IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H... 377 e-104
IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H f... 295 1e-79
IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H... 292 7e-79
IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H... 289 7e-78
IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H... 206 5e-53
IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidy... 197 3e-50
IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidy... 180 4e-45
IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl t... 179 1e-44
IMGA|Medtr8g044870.1 Reverse transcriptase, identical chr08_pseu... 175 1e-43
IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl t... 172 1e-42
IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidy... 157 4e-38
IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H... 153 5e-37
IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidy... 150 4e-36
IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA po... 149 6e-36
IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H... 147 3e-35
IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H... 137 5e-32
IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H... 133 6e-31
IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA po... 126 6e-29
IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H... 122 1e-27
IMGA|Medtr4g157500.1 polyprotein-like, putative chr04_pseudomole... 117 3e-26
IMGA|Medtr6g077130.1 Zinc finger, CCHC-type chr06_pseudomolecule... 117 4e-26
IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl tra... 110 5e-24
IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H... 107 4e-23
IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H... 102 1e-21
IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H... 91 3e-18
IMGA|Medtr3g044280.1 hypothetical retrotransposon, related chr03... 89 1e-17
IMGA|Medtr5g082230.1 hypothetical retrotransposon, related chr05... 89 1e-17
IMGA|Medtr6g069750.1 Reverse transcriptase, putative chr06_pseud... 88 4e-17
IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin, se... 87 7e-17
IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin, se... 87 7e-17
IMGA|Medtr8g128700.1 Integrase, catalytic region chr08_pseudomol... 83 9e-16
IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA po... 82 2e-15
IMGA|Medtr1g076760.1 hypothetical protein chr01_pseudomolecule_I... 80 5e-15
IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H f... 75 2e-13
IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H... 72 2e-12
IMGA|Medtr4g019480.1 Integrase, catalytic region chr04_pseudomol... 68 4e-11
IMGA|Medtr8g044880.1 polyprotein-like, putative chr08_pseudomole... 67 6e-11
IMGA|Medtr5g089840.1 copia LTR rider, related chr05_pseudomolecu... 67 7e-11
IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative chr... 64 4e-10
IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG... 64 7e-10
IMGA|Medtr3g097190.1 copia-type polyprotein, putative chr03_pseu... 62 2e-09
IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA po... 62 2e-09
IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA po... 61 5e-09
IMGA|Medtr3g097840.1 hypothetical protein chr03_pseudomolecule_I... 59 2e-08
IMGA|Medtr3g044010.1 hypothetical protein chr03_pseudomolecule_I... 59 2e-08
IMGA|Medtr7g135120.1 Copia protein, related chr07_pseudomolecule... 58 4e-08
IMGA|Medtr8g012170.1 polyprotein, putative chr08_pseudomolecule_... 57 6e-08
IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related ... 57 8e-08
IMGA|Medtr4g110620.1 polyprotein-like, related chr04_pseudomolec... 56 1e-07
IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H... 55 2e-07
IMGA|Medtr6g036540.1 Zinc finger, CCHC-type chr06_pseudomolecule... 55 2e-07
IMGA|Medtr4g104320.1 hypothetical protein chr04_pseudomolecule_I... 54 4e-07
IMGA|Medtr4g025100.1 Integrase, catalytic region; Zinc finger, C... 54 6e-07
IMGA|Medtr8g096240.1 hypothetical protein chr08_pseudomolecule_I... 54 6e-07
IMGA|Medtr1g102740.1 gag-pol polyprotein, related chr01_pseudomo... 54 7e-07
IMGA|Medtr7g116810.1 hypothetical protein chr07_pseudomolecule_I... 53 1e-06
IMGA|Medtr1g102780.1 gag-pol polyprotein, related chr01_pseudomo... 52 2e-06
IMGA|Medtr5g046390.1 gag-pol polyprotein, related chr05_pseudomo... 51 3e-06
>IMGA|Medtr5g072700.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 25937763-25933415 H
EGN_Mt090430 20090702
Length = 1413
Score = 427 bits (1097), Expect = e-119, Method: Compositional matrix adjust.
Identities = 309/1061 (29%), Positives = 497/1061 (46%), Gaps = 97/1061 (9%)
Query: 296 WVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKDV 355
W +DSGA H S F+S+ N V + +G + V G I ++DV
Sbjct: 381 WFLDSGANEHIVSSTHWFTSFHKINPKPVNLPNGTSVLVEYAGTIHFTPH----FYIEDV 436
Query: 356 VHVPDMHSNLISVGRLDAENFC-STFRNGKWKLTKGSMVIANGKKDPKLYVMHAKLSRDA 414
++ P NLIS+ ++ + C ++F + K L +H S+
Sbjct: 437 LYSPSFTLNLISIFKVCSSLHCYASFHDKKCFLQD----------------LH---SQKM 477
Query: 415 FNVAEDDSAV--ELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKYSDCMAGKQNRVAF 472
+ E + + +KRL HMS T V N+ + C KQ +++F
Sbjct: 478 IGLGEQVRGLLGHVSNKRLNHMSHLYPTLTVDNHATCDI----------CQFAKQKKLSF 527
Query: 473 KISQPSRMKNVLDLVHSDLCGPL-MMSYGGNRYFVTFINDHSRKTWVYTLKSKDQVLDVF 531
S S + +L+H D+ GPL + S +RYF+T ++D+S W+ LKSK +V
Sbjct: 528 PTSV-SVASSKFELLHFDIWGPLAVTSIHNHRYFLTILDDYSIFFWIVLLKSKYEVSQHV 586
Query: 532 KQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNR 591
K F+NL+ Q K +R+DNG E+ ++F GI H + +TPQ NG ER ++
Sbjct: 587 KNFINLIHTQYHITPKVVRSDNGPEFL--LNSFYASKGIVHHKSCVETPQQNGRVERKHQ 644
Query: 592 TLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRV 651
++ R LL +KL +W ALL A+ +INR L +P ++ G +V
Sbjct: 645 HILNVGRALLFQSKLPSSYWSYALLHAIFIINRVTSPTLHNKSPYQLLHGTIPDVQTFKV 704
Query: 652 FGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVEN-QT 710
FG + + R+KL + R+ VF+GY GY D +++ SR F E+
Sbjct: 705 FGSLCYSTTLQSHRTKLSARARKTVFLGYAVGYKGYVLLDIHTREIHISRHVQFHEHILP 764
Query: 711 IEDVETTQKEAADRSENDSTDVQIVPPTTEQRQVGDEDXXXXXXXXXXXXXXXXYQNEPE 770
+T D +DS P + + P
Sbjct: 765 YPTNPSTITTTWDYFSSDSCSASNPLPKSSTISPIIPPPFIDV-------------DTPP 811
Query: 771 EDFDDVHVQPPAPEGSQTLRRSSRVRQPST----------------RYSANEYVLMTDGG 814
D D H P P+ +R+SSR+ QP T +Y + Y+ +
Sbjct: 812 SD--DNHSVSPIPQ-PPVIRKSSRITQPPTHLQDYVCSVSDDTSFVQYPISHYLSYNNLS 868
Query: 815 EPEC-FEEAMESEHKRN----------WIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXX 863
C F +++S + W +AMQ E+ +L T++
Sbjct: 869 SSHCAFALSLDSHTEPTTYAEASKFDCWKQAMQVELSALENTGTWKLVDLPPNVKPIVCR 928
Query: 864 WVFRIKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGMAASFDLEI 923
W+++IK S R+KARLV KG+NQ +G+D+ + +SPV K+T++RT++ +A + I
Sbjct: 929 WIYKIKHHADGSIERYKARLVAKGYNQIEGLDYFDTYSPVAKLTTVRTIIALAYMNNWHI 988
Query: 924 EQMDVKTAFLHGDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLYGLKQAPRQWYKKFEFVM 983
Q+DV AFLHGDL+E++YM P+G I K + VCKL KSLYGLKQA R+WY+K ++
Sbjct: 989 HQLDVNNAFLHGDLQEDVYMIVPQG-ITPSKSNQVCKLIKSLYGLKQASRKWYEKLTSLL 1047
Query: 984 GKQGYKKTTSDQCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVRINSLKKQLSKSFAMKDL 1043
Y ++TSD +F+KK + G + +K L + +KDL
Sbjct: 1048 VHHHYLQSTSDHSLFIKK-TYTSFTALLVYVDDVIITGTSLSEFQDIKAILHSALEIKDL 1106
Query: 1044 GPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVSCPLANHFKLSSKQCPS 1103
G K LG+++ + ++ + L Q KY +L +K S P KL +
Sbjct: 1107 GQLKYFLGLEVAHS--SQGISLCQRKYCLDLLTDIGFLAAKPASTPSDPSCKLHA----- 1159
Query: 1104 TDGEKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRYL 1163
DG + Y +G L+Y + TRP I + +S+FL++P ++H+ A I RYL
Sbjct: 1160 -DGGPPFSDIPSYRRLIGRLIY-LTNTRPYITFATQQLSQFLNSPTEKHYIAATRILRYL 1217
Query: 1164 RGTTKVCLCFG-DEKPILVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVAL 1222
+ + L F D L GY+DAD AG +DSR+S SG +SW+++ Q V+
Sbjct: 1218 KKSPGQGLFFPRDSSLFLSGYSDADWAGCLDSRRSISGQCFFLGHSLISWKTKKQLTVSR 1277
Query: 1223 STTEAEFIALTEACKELLWMKKFLNELGIHQER-YLIFCDSQSAIHLGKNSSFHSRSKHI 1281
S++EAE+ AL A EL W+ L++L + + ++++CD+QSA+H+ N FH R+KH+
Sbjct: 1278 SSSEAEYRALGAATCELQWLLYLLHDLHVTTVKLHVLYCDNQSALHIAANPVFHERTKHL 1337
Query: 1282 DVRYHWIRDVLEMKQLQLEKIHTDENGSDMLTKILPKDKFE 1322
++ H +R+ L+ ++L + + + +D TK L F
Sbjct: 1338 EIDCHLVREKLQACIMKLLPVTSADQLADFFTKPLLPQPFH 1378
>IMGA|Medtr4g080020.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 16287611-16283185 H
EGN_Mt090430 20090702
Length = 1275
Score = 377 bits (968), Expect = e-104, Method: Compositional matrix adjust.
Identities = 266/815 (32%), Positives = 393/815 (48%), Gaps = 86/815 (10%)
Query: 547 KCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKL 606
K IR DNG E+ F HGI H + +TPQ NG ER ++ ++ VR LL +KL
Sbjct: 459 KTIRIDNGPEFM--LKDFYASHGIIHHKSCVETPQQNGRVERKHQHILNVVRALLFQSKL 516
Query: 607 SKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERS 666
FW A+L AV LINR L +P V K S D +VFGC + ++ R+
Sbjct: 517 PPTFWSYAVLHAVFLINRVSTPLLHNQSPYLVLHNKLPSLDLFKVFGCLCYASTLQNHRT 576
Query: 667 KLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVE---------NQTIED---V 714
KL + R+ +F+GY GY FD +++ SR F E + T D
Sbjct: 577 KLQSRARKSIFLGYQSGYKGYVLFDLTSREIFISRHVSFHETILPYHKNPSSTTADWNYY 636
Query: 715 ETTQKEAADRSENDSTDVQIVPPTTEQRQVGDEDXXXXXXXXXXXXXXXXYQNEPEEDFD 774
++Q + D+S N + V I V D+ P D
Sbjct: 637 PSSQSYSHDQSPNVNHQVHI-------PAVIDD----------ILPSTHVLPPSPPYDSP 679
Query: 775 DVHVQPPAPEGSQTLRRSSRVRQP-------------STRYSANEYV------------- 808
+HV P RRS+RVR ST Y + Y+
Sbjct: 680 PIHVSP---------RRSNRVRTAPLHLQDYVCNSVHSTTYPLSHYINYNNISTNHASFI 730
Query: 809 -LMTDGGEPECFEEAMESEHKRNWIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFR 867
+ EP + EA S+H W +AMQ E+ +L + T++ W+++
Sbjct: 731 SSLQTTPEPTTYVEA--SKHD-CWNKAMQAELLALEKTGTWDIVDLPAYVKPIGCRWIYK 787
Query: 868 IKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGMAASFDLEIEQMD 927
+K S R+KARLV KG+ Q +G+D+ E +SPV K+T++R V+ +A+ + + Q+D
Sbjct: 788 VKHNADGSIERYKARLVAKGYTQIEGLDYFETYSPVAKLTTVRLVIALASIHNWHLHQLD 847
Query: 928 VKTAFLHGDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLYGLKQAPRQWYKKFEFVMGKQG 987
V AFLHG+L+E++YM P G I K VCKLKKSLYGLKQA RQWY+K V+ +Q
Sbjct: 848 VNNAFLHGELQEDVYMILPPG-INIAKPHQVCKLKKSLYGLKQASRQWYEKLTSVLIQQH 906
Query: 988 YKKTTSDQCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVRINSLKKQLSKSFAMKDLGPAK 1047
Y + +SD +F+KK S G + + ++K L SF +KDLG K
Sbjct: 907 YIQASSDHSLFIKK-SSDSFTILLVYVDDIILAGTSLLEFQNIKSILDTSFKIKDLGQLK 965
Query: 1048 QILGMKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVSCPLANHFKLSSKQCPSTDGE 1107
LG+++ ++ L+ Q KY +L SK +S P KL D
Sbjct: 966 YFLGIEVAHSKLGISLY--QRKYCLDLLHDSGHIGSKPISTPSDPSTKLHHDTSTPYD-- 1021
Query: 1108 KEVMEKIP-YASAVGSLMYAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRYLRGT 1166
IP Y VG L+Y + TRPDI +S+FLSNP H A RYL+
Sbjct: 1022 -----DIPAYRRLVGRLLY-LNNTRPDITFITQQLSQFLSNPTIAHHNAALRTLRYLKSC 1075
Query: 1167 TKVCLCFGDEKPI-LVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVALSTT 1225
L F + L G++DAD AG +D+RKS +G +SW+++ Q V+ S++
Sbjct: 1076 PGKGLFFPRNSSLTLQGFSDADWAGCLDTRKSVTGQCFFLGNSLISWRTKKQTTVSRSSS 1135
Query: 1226 EAEFIALTEACKELLWMKKFLNELGIHQER-YLIFCDSQSAIHLGKNSSFHSRSKHIDVR 1284
EAE+ AL A E+ W+ LN+L I + +++CD+QSA+H+ N FH R+KH+++
Sbjct: 1136 EAEYRALASATCEIQWLLYLLNDLHITCSKPPVLYCDNQSALHIAANPVFHERTKHLEID 1195
Query: 1285 YHWIRDVLEMKQLQLEKIHTDENGSDMLTK-ILPK 1318
H +R+ L+ L+L + + + +D TK +LPK
Sbjct: 1196 CHIVREKLQAGVLKLLPVSSQDQIADFFTKALLPK 1230
>IMGA|CU179634_24.1 Polynucleotidyl transferase, Ribonuclease H fold
CU179634.6 87152-89450 H EGN_Mt090430 20090702
Length = 688
Score = 295 bits (755), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 211/738 (28%), Positives = 321/738 (43%), Gaps = 107/738 (14%)
Query: 465 GKQNRVAFKISQPSRMKNVLDLVHSDLCGPLMMSYGGN-RYFVTFINDHSRKTWVYTLKS 523
+Q+R+ F + + +L+H D+ GP + N +YF+T ++D S+ TW L
Sbjct: 2 ARQSRLPFP-PKTHTTTGIFELLHVDIWGPYQTTTHDNFKYFITLVDDFSKSTWTQLLSC 60
Query: 524 KDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG-PFDAFCKEHGIRHQTTPPKTPQL 582
K V K F+ +VE Q +K IR+DNG E+T F + GI HQ + P TPQ
Sbjct: 61 KSNAFHVLKAFILMVENQFSTTVKTIRSDNGLEFTSNETTLFFQSKGIIHQKSCPYTPQQ 120
Query: 583 NGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGK 642
NG+ ER ++ ++E R LL +KL ++W E
Sbjct: 121 NGVVERKHKFILETARALLFQSKLPVKYWSEF---------------------------- 152
Query: 643 DVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRD 702
R+K D KT VF+GY GY+ + +K+ SRD
Sbjct: 153 ---------------------HRTKFDPKTIPHVFVGYPYATKGYKVLNLSTQKIHVSRD 191
Query: 703 AVFVE--------------------------------NQTIEDVETTQKEAADRSENDST 730
+F E +Q ETT EN ++
Sbjct: 192 VIFHETIFPFAMSKDPTHFPKFPFHCVSLHDYPTSYDDQDYSSKETTTSPTHITPENSTS 251
Query: 731 DVQIVPPTTEQRQVGDEDXXXXXXXXXXXXXXXXYQNEPEEDFDDVHVQPPAPEG---SQ 787
I P E + N P + QPP P +
Sbjct: 252 PTHITP---ENSTSIPQLRRSQRLHKTPTYLTDYVHNVPSSTVSNS--QPPQPHSLPLNA 306
Query: 788 TLRRSSRVRQPSTRYSANEYVL-MTDGGEPECFEEAMESEHKRNWIEAMQEEMKSLHENK 846
V + + +++ ++ EP +EEA W +AM +E +LH+N
Sbjct: 307 LFTLKHYVSPDVFSFDSQSFIMNISHDCEPNSYEEASMDP---AWQKAMTQEFLALHDNN 363
Query: 847 TFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKM 906
T+ WV+++K + S R+KARLVVKG+ Q GID+ E FSPVVKM
Sbjct: 364 TWTLTNLPKDKKSVGCRWVYKVKHKADGSVERYKARLVVKGYTQHHGIDYTETFSPVVKM 423
Query: 907 TSIRTVLGMAASFDLEIEQMDVKTAFLHGDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLY 966
T++RT++ AA I Q+DV AFLHGDL EE+YM+ P G K D VCKL KSLY
Sbjct: 424 TTVRTLIVAAAKKQWNIHQLDVNNAFLHGDLHEEVYMDIPPGLATPHK-DLVCKLNKSLY 482
Query: 967 GLKQAPRQWYKKFEFVMGKQGYKKTTSDQCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVR 1026
GLKQA RQWY+K + +GY+ + D +F KK G ++
Sbjct: 483 GLKQASRQWYEKLTEALHTRGYEHSPHDYSLFYKK-RGASNVFLGVYVDDILLTGTDTNE 541
Query: 1027 INSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAV 1086
I+ LK+ L F +KDLG LG+++ + + +SQ K++ +L+ F ++ +
Sbjct: 542 IDELKRFLDNQFKIKDLGRLHYFLGLEVL--YKDDGILVSQRKFVLDLLKEFNCDHMAPL 599
Query: 1087 SCPLANHFKLSSKQCPSTDGEKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGVVSRFLS 1146
S PL + KL S + D + Y +G L + + TR D+A+ V ++S+++
Sbjct: 600 SSPLDPNIKLRSHEGKVLD------DPTYYRKLIGKLNF-LTHTRLDLAYGVQLLSQYMQ 652
Query: 1147 NPGKEHWAAVKWIFRYLR 1164
+P + H A + RYL+
Sbjct: 653 DPREPHLHAAFHMLRYLK 670
>IMGA|Medtr5g048830.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 20699955-20695616 H
EGN_Mt090430 20090702
Length = 1396
Score = 292 bits (748), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 182/521 (34%), Positives = 271/521 (52%), Gaps = 19/521 (3%)
Query: 805 NEYVL-MTDGGEPECFEEAMESEHKRNWIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXX 863
+ YVL + EP+ + EA + E W +AMQ E+++L + T+
Sbjct: 855 SSYVLSLHTHNEPKTYAEANKHE---CWQKAMQVELQALEQTGTWNFVDLPPNVKPIGCR 911
Query: 864 WVFRIKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGMAASFDLEI 923
WVF+IK+ S R+KARLV KG+ Q +G+D+ + FSPV K+T++R ++ +A+ +
Sbjct: 912 WVFKIKRHADGSIERYKARLVAKGYTQVEGLDYFDTFSPVAKLTTVRLIIALASINHWHL 971
Query: 924 EQMDVKTAFLHGDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLYGLKQAPRQWYKKFEFVM 983
Q+DV AFLHGDL+E +YM P G I + VCKL KSLYGLKQA R+WY K ++
Sbjct: 972 HQLDVNNAFLHGDLQENVYMTLPPG-ISAKHSNTVCKLNKSLYGLKQASRKWYDKLTSIL 1030
Query: 984 GKQGYKKTTSDQCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVRINSLKKQLSKSFAMKDL 1043
K Y + SD +F KK + G + +K L F +KDL
Sbjct: 1031 LKHQYTQAHSDHSLFTKK-TGTSYTILLVYVDDIILAGDSLEEFQYIKSILDTLFKIKDL 1089
Query: 1044 GPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVSCPLANHFKLSSKQCPS 1103
G K LG+++ ++ + L Q+KY +L SK S P KL
Sbjct: 1090 GQLKFFLGLEVAHSQL--GISLCQKKYCLDLLADSGTIGSKPASTPSDPSLKLHK----- 1142
Query: 1104 TDGEKEVMEKIP-YASAVGSLMYAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRY 1162
DG E IP Y +G L+Y + TRPDI + +S+FLS P H +A + RY
Sbjct: 1143 -DGALP-YEDIPSYRRLIGRLLY-LNTTRPDITYITQQLSQFLSAPTHTHHSAALRVLRY 1199
Query: 1163 LRGTTKVCLCFGDEKPI-LVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVA 1221
L+ L F P+ L GY+DAD AG +D+R+S SG +SW+++ Q V+
Sbjct: 1200 LKNCPGKGLFFPRNSPLQLQGYSDADWAGCLDTRRSISGQCFFLGNSLISWRTKKQVTVS 1259
Query: 1222 LSTTEAEFIALTEACKELLWMKKFLNELGIHQERY-LIFCDSQSAIHLGKNSSFHSRSKH 1280
S++EAE+ AL A EL W+ L +L + + ++FCD+QSA+H+ N FH R+KH
Sbjct: 1260 RSSSEAEYRALASATCELQWLIYLLQDLHVTCTKLPVLFCDNQSALHIAANPVFHERTKH 1319
Query: 1281 IDVRYHWIRDVLEMKQLQLEKIHTDENGSDMLTKILPKDKF 1321
+++ H +R+ L L+L + + E +D TK L F
Sbjct: 1320 LEIDCHIVREKLHSGILKLLPVSSKEQVADFFTKSLHPQPF 1360
Score = 146 bits (369), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 95/284 (33%), Positives = 144/284 (50%), Gaps = 21/284 (7%)
Query: 426 LWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKYSDCMAGKQNRVAFKISQPSRMKNVLD 485
LWH RLGH+S + M + +++ + + + C KQ + F S S +
Sbjct: 494 LWHFRLGHLSNQRMIKM--SHLYPSIVHNNRDVCDICHFSKQKHLPFS-SSLSHASTNFE 550
Query: 486 LVHSDLCGPLMMS-YGGNRYFVTFINDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGK 544
L+H D+ GP+ +S G+RYF+T ++DHSR W+ LKSK +V K F+ ++ Q
Sbjct: 551 LLHFDIWGPISISSVHGHRYFLTILDDHSRFLWIILLKSKSEVSLHVKNFILMIRTQFHV 610
Query: 545 KLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHA 604
K +R+DNG E+ + F HGI HQ + +TPQ NG ER ++ ++ R LL +
Sbjct: 611 TPKYVRSDNGPEFL--LNDFYSSHGIIHQKSCVETPQQNGRVERKHQHILNVGRALLYQS 668
Query: 605 KLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDE 664
KL FW A+L AV LINR P L +P V K +++F
Sbjct: 669 KLPPSFWSYAILHAVFLINRVPTHVLHNQSPYHVLFHK---LPDIQLF------------ 713
Query: 665 RSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVEN 708
+SKL + R+ +F+GY GY FD +++ SR +F EN
Sbjct: 714 KSKLQPRARKSLFLGYKSGYKGYHLFDLSTREIFVSRHVIFHEN 757
>IMGA|Medtr4g079130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 15761100-15765439 H
EGN_Mt090430 20090702
Length = 1414
Score = 289 bits (739), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 176/508 (34%), Positives = 273/508 (53%), Gaps = 19/508 (3%)
Query: 815 EPECFEEAMESEHKRNWIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHS 874
EP+ + EA + + W AMQ E+++L + T++ W++++K
Sbjct: 892 EPKSYAEASKLD---CWKHAMQVELQALEKTGTWKLVDLPPNVKPIGCRWIYKVKFHADG 948
Query: 875 SQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGMAASFDLEIEQMDVKTAFLH 934
+ R+KARLV KG+NQ +G+D+ + +SPV K+T++R V+ +++ + + Q+DV AFLH
Sbjct: 949 TVERYKARLVAKGYNQIEGLDYLDTYSPVAKLTTVRLVIALSSINNWHLHQLDVNNAFLH 1008
Query: 935 GDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLYGLKQAPRQWYKKFEFVMGKQGYKKTTSD 994
GDL+E++YM P G IK K + VCKL KSLYGLKQA R+WY+K V+ Q Y + TSD
Sbjct: 1009 GDLQEDVYMMVPPG-IKSSKLNQVCKLTKSLYGLKQASRKWYEKLTSVLFDQHYTQATSD 1067
Query: 995 QCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKI 1054
+FVKK S G + + +K L F +KDLG K LG+++
Sbjct: 1068 YSLFVKKTS-TSFTVLLVYVDDIILAGNSISEFSHIKSILDSLFKIKDLGQLKYFLGIEV 1126
Query: 1055 TRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVSCPLANHFKLSSKQCPSTDGEKEVMEKI 1114
++ + L Q KY +L SK +S P + KL E +
Sbjct: 1127 AHSKL--GISLCQRKYCLDLLADIGSLGSKPISTPSDSSIKLHL-------DSSSPFEDV 1177
Query: 1115 PYA-SAVGSLMYAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRYLRGTTKVCLCF 1173
P VG L+Y + TRPDI +S+FLS P + H +A + +YL+ L F
Sbjct: 1178 PACRRLVGRLLY-LNNTRPDITFITQQLSQFLSQPTQAHHSAALRVLKYLKSCPGKGLFF 1236
Query: 1174 GDEKPI-LVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVALSTTEAEFIAL 1232
+ L G++DAD AG +D+R+S SG +SW+++ Q V+ S++EAE+ AL
Sbjct: 1237 PRSSSLNLQGFSDADWAGCIDTRRSISGQCFFLGNSLISWRTKKQITVSKSSSEAEYRAL 1296
Query: 1233 TEACKELLWMKKFLNELGIHQERY-LIFCDSQSAIHLGKNSSFHSRSKHIDVRYHWIRDV 1291
A EL W+ L +L + +++CD+QSAIH+ N FH R+KH+++ H IRD
Sbjct: 1297 ASATCELQWILYLLKDLHTTCPKLPVLYCDNQSAIHIANNPVFHERTKHLEIDCHLIRDK 1356
Query: 1292 LEMKQLQLEKIHTDENGSDMLTK-ILPK 1318
L+ L+L + + + +D TK +LPK
Sbjct: 1357 LQSGVLKLLTVSSQDQVADFFTKALLPK 1384
Score = 132 bits (332), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 119/436 (27%), Positives = 180/436 (41%), Gaps = 67/436 (15%)
Query: 296 WVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKDV 355
W+IDSGA H FSS+ V + +G ++ V G + + + L V
Sbjct: 387 WLIDSGANEHICCDITFFSSFYRIKPVNVSLPNGTIVLVHYAGTVSFNS----KFYLNHV 442
Query: 356 VHVPDMHSNLISVGRLDAENFCSTFRNGKWKLT----KGSMVIANGKKDPKLYVMHAKLS 411
++ P+ NLISV +L E+ F K + +I K+ LY + S
Sbjct: 443 LYSPNFLLNLISVAKL-CESLTCFFHFSLDKCLIQDQQSLKMIGLAKQMDGLYKFYPSSS 501
Query: 412 RDAF----------NVAEDDSAVE---------LWHKRLGHMSEKGMTTLVKNNMLSGLD 452
NV S + LWH RLGH+S++ + TL ++L
Sbjct: 502 SCNLELFSSPTKYCNVVLPSSCNKIPTFVPSDTLWHFRLGHLSKQRLQTL---SLLYP-- 556
Query: 453 KVHLEKYSDCMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPLMMSYGGNRYFVTFINDH 512
+ KI K + DL H + +++ NDH
Sbjct: 557 ------------------SIKIDN----KAICDLCH----------FAKHKHLPFTSNDH 584
Query: 513 SRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRH 572
SR W+ LK+K +V K F+ +++ K IRTDNG E+ HGI H
Sbjct: 585 SRFLWIILLKTKAEVSTHVKNFITMIKNHFHTTPKFIRTDNGPEFM--LSTLYSSHGIIH 642
Query: 573 QTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQY 632
Q + +TPQ NG ER ++ ++ R LL +KL +W A+ AV LINR P L
Sbjct: 643 QKSCVETPQQNGRVERKHQHILNVGRALLYQSKLPPAYWCYAIQHAVFLINRVPTPTLNN 702
Query: 633 DTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDP 692
+P V K +VFGC + + +KL + R+ +FIGY G+ +D
Sbjct: 703 QSPYFVLHHKLPDSSLFKVFGCLCYASTLQSHTTKLKHRARKSIFIGYQSGYKGFTLYDL 762
Query: 693 LQKKMIRSRDAVFVEN 708
+++ SR F EN
Sbjct: 763 HSREIFISRHVTFHEN 778
>IMGA|Medtr1g140330.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 31006465-31009370 H
EGN_Mt090430 20090702
Length = 883
Score = 206 bits (525), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 196/754 (25%), Positives = 320/754 (42%), Gaps = 114/754 (15%)
Query: 11 LNGANYHIWRNKMRDLLMVTKMHLPVFGSSKPA----DKTDEEWAFEHEQVCGYIRQFVD 66
L+ +NYH W MR L K S P D + W + V +I V+
Sbjct: 47 LSHSNYHSWARSMRRALGA-KNKFDFVDGSIPVPTDFDPNFKAWNRCNMLVHSWIMNSVE 105
Query: 67 DNVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQEGTSVADHLSEMQVT 126
D++ I +A L L + ++ +T +MN K+Q E+ +
Sbjct: 106 DSIAQSIVFLKNAIDLEAYLPTPVCACP--HRCMCITGVMNAKHQH---------EITRS 154
Query: 127 IHQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTLHSGLSWEFVKNAVLNEEMRR 186
I L+ + FD ++++ LP N + + M+
Sbjct: 155 IRFLTGLNDSFDLVRSQILLMNPLP-----------------------TINKIFSMVMQH 191
Query: 187 KAQ---NLSSSQSDILLADAKRNNHSRGRSQSRSSNTRDKSRGRSNKFANIVCHHCGKKG 243
+ Q ++ S IL+ A G+SQ R + G SN C CG+ G
Sbjct: 192 ERQFKISIPVDDSTILVNSA-------GKSQGRG-----RGNGNSNSNGKRSCSFCGRDG 239
Query: 244 HIKRYC-----RKFKSDQEKIKGKAKKEES--------------------SDDEANV--- 275
H C R+ D + KG + E S S + N+
Sbjct: 240 HTIDICYRKHEREDLDDSKSCKGNSNTEPSFGITKEQYEQLVTLLQSQQASSSKVNLSHV 299
Query: 276 ---IAEFQLFIEDTINLATQETSWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLL 332
+ I T+N ++ T W++DSGA+ H S +NF SY P +K+ +G +
Sbjct: 300 TNHVTSGITRISYTMNHSSFGT-WIVDSGASDHICSSIKNFDSYAPIIPVHIKLPNGNMA 358
Query: 333 KVVGKGDICLETENGXRLILKDVVHVPDMHSNLISVGRLDAENFC-STFRNGKWKLTKGS 391
G + LI ++V++V + NL+SV +L +N C TF N K + S
Sbjct: 359 IAKFSGTVTFSPG----LIARNVLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKS 414
Query: 392 MVIANGKKDPKLYVMHAKLSRDAFNVAEDDSAV---------------ELWHKRLGHMSE 436
+ G + + L F+ + LWH RLGH+S
Sbjct: 415 NLKMTGLGELIEGLYFLNLGSQVFSQFNHQPVIASSQASSSTTFLPQEALWHFRLGHLSN 474
Query: 437 KGMTTLVKNNMLSGLDKVHLEKYSD-CMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPL 495
L++ KV D C + ++ FK+S ++ + +L+H D+ GP+
Sbjct: 475 D---RLLRMQQHFPCIKVDSNSVCDICHYSRHKKLPFKLSM-NKASHCYELIHFDIWGPI 530
Query: 496 -MMSYGGNRYFVTFINDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNG 554
S G++YF+T ++D+SR TW+ K+K +V + F+ +E Q K+K +RTDNG
Sbjct: 531 STHSIHGHKYFITALDDYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNG 590
Query: 555 GEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEA 614
E+ P F GI HQT+ +TPQ NG ER ++ ++ R LL +KL K FW +
Sbjct: 591 PEFLMP--DFYSSKGIEHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKVFWSYS 648
Query: 615 LLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQ 674
+L A+++INR P LQ +P + G D ++ +VFGC ++ + R+K D + ++
Sbjct: 649 VLHAIYIINRIPTPLLQNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQK 708
Query: 675 CVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVEN 708
CVF+GY Q G +D K + SR+ + E+
Sbjct: 709 CVFLGYKQGIKGAILYDLNHKTIFASRNVTYHEH 742
>IMGA|Medtr8g044140.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 9732923-9735744 H
EGN_Mt090430 20090702
Length = 920
Score = 197 bits (501), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 134/437 (30%), Positives = 215/437 (49%), Gaps = 40/437 (9%)
Query: 295 SWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKD 354
+W++DSGA+ H S + F SY P +K+ +G + G + LI ++
Sbjct: 391 TWIVDSGASDHICSSIKFFDSYAPIIPVHIKLPNGNMAIAKFSGTVNFSPG----LIARN 446
Query: 355 VVHVPDMHSNLISVGRLDAENFC-STFRN---------------------GKWKLTKGSM 392
V++V + NL+SV +L +N C TF N G + L GS
Sbjct: 447 VLYVAEFKLNLLSVPKLCMDNNCIVTFDNDKCFIQDKSNLKMTGLGELIEGLYFLNLGSQ 506
Query: 393 VIANGKKDPKLYVMHAKLSRDAFNVAEDDSAVELWHKRLGHMSEKGMTTLVKNNMLSGLD 452
V + P + + + S F E LWH RLGH+S L++
Sbjct: 507 VFSQFNHQPVIALSQSS-SSTTFLPQE-----ALWHFRLGHLSND---RLLRMQQHFPCI 557
Query: 453 KVHLEKYSD-CMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPL-MMSYGGNRYFVTFIN 510
KV D C + ++ FK+S ++ + +L+H D+ GP+ S G++YF+T ++
Sbjct: 558 KVDSNSVCDICHYSRHKKLPFKLSM-NKASHCYELIHFDIWGPISTHSIHGHKYFITALD 616
Query: 511 DHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGI 570
D+SR TW+ K+K +V + F+ +E Q K+K +RTDNG E+ P F GI
Sbjct: 617 DYSRFTWIMLCKTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP--DFYSSKGI 674
Query: 571 RHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPL 630
HQT+ +TPQ NG ER ++ ++ R LL +KL K FW ++L A+++INR P L
Sbjct: 675 EHQTSCVETPQQNGRVERKHQHILNVARALLFQSKLPKIFWSYSVLHAIYIINRIPTPLL 734
Query: 631 QYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFF 690
Q +P + G D ++ +VFGC ++ + R+K D + ++CVF+GY Q G +
Sbjct: 735 QNKSPYFLRYGHDPDLNNFKVFGCLSYASTLHNHRTKFDSRAQKCVFLGYKQGIKGAILY 794
Query: 691 DPLQKKMIRSRDAVFVE 707
D K + SR+ + E
Sbjct: 795 DLNHKTIFASRNVTYHE 811
>IMGA|Medtr2g104160.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 24496395-24493968 H
EGN_Mt090430 20090702
Length = 790
Score = 180 bits (457), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 126/402 (31%), Positives = 195/402 (48%), Gaps = 24/402 (5%)
Query: 293 ETSWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLIL 352
+ W++D+GAT H F+SY+ V + +G +++ G + L + L +
Sbjct: 395 DPGWIVDTGATHHTCYDLNWFTSYSKIETINVNLPNGSVIEACYIGQVKLSKD----LSI 450
Query: 353 KDVVHVPDMHSNLISVGRLDAENFCST-FRNGKWKLTKGSMV--IANGKKDPKLYVMHAK 409
+V+++P NLISV +L E C F + + + + I K+ LY +
Sbjct: 451 DNVLYLPKFAVNLISVSKLCREQNCKLEFEADICIIQEKNTLRKIGLAKEKHGLYYLETD 510
Query: 410 LSRDAFNVAEDDSAVEL----------WHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKY 459
R+ +V+ + VEL WH RLGH+S M + N M S +
Sbjct: 511 -ERNKVSVSNISAQVELHQKHVPDGVLWHLRLGHLSHDRMICM--NKMYSYVPVSPHTAC 567
Query: 460 SDCMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPL-MMSYGGNRYFVTFINDHSRKTWV 518
C +Q + F IS K DLVH D+ GP S G++YF+T ++D +R W+
Sbjct: 568 DVCQMCRQKILPFPISS-RNAKTAFDLVHFDIWGPFSTTSVHGHKYFLTILDDCTRHVWI 626
Query: 519 YTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPK 578
LK+K + K F+++VERQ +K+K IR+DNG E+ F + GI HQ +
Sbjct: 627 VMLKNKSEASYQVKNFVSMVERQFERKIKMIRSDNGPEFM--LREFYDKKGIIHQRSCVY 684
Query: 579 TPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERV 638
TPQ NG ER ++ ++ R L+ +KL K FW A+L AV+LINR P L + V
Sbjct: 685 TPQQNGRVERRHQHILNISRALMFQSKLPKNFWSYAVLHAVYLINRIPTKILNNKSSYEV 744
Query: 639 WSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGY 680
+ L+VFGC ++ R K D K R+C F+G+
Sbjct: 745 LYNEVPDLSSLKVFGCLSYASTLPVNRYKFDPKARKCAFLGF 786
>IMGA|AC235009_2.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235009.1 5302-2150 H
EGN_Mt090430 20090702
Length = 1051
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 133/448 (29%), Positives = 208/448 (46%), Gaps = 44/448 (9%)
Query: 295 SWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKD 354
SW+IDSGA H + +F+S+ +V + +G + V G++ L L
Sbjct: 350 SWIIDSGANDHVCFSKTHFTSFYKIKPVLVTLPNGTSIYVHYAGNVHFTP----YLHLTH 405
Query: 355 VVHVPDMHSNLISVGRLDAENFCST-FRNGKWKL--TKGSMVIANGKKDPKLY--VMH-- 407
V++ P+ NLISV ++ CS F + K + +I G K LY MH
Sbjct: 406 VLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFV 465
Query: 408 --------------AKLSRDAFNVAEDDSAV-------------ELWHKRLGHMSEKGMT 440
K++ A N++ + LWH RLGH+S + ++
Sbjct: 466 NQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLS 525
Query: 441 TLVKNNMLSGLDKVHLEKYSDCMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPLMMSY- 499
T+ + + + + C + ++ F S S + L+H D+ GPL ++Y
Sbjct: 526 TMSR--LYPSIIVDNKAACDICHFARHKKLPFPHSS-SHANSKFQLLHFDIWGPLAINYV 582
Query: 500 GGNRYFVTFINDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG 559
G++YF+T ++DH+R W+ LKSK +V K F+ L+E Q K IRTDNG E+
Sbjct: 583 HGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFL- 641
Query: 560 PFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAV 619
F GI HQ + +TPQ NG ER ++ ++ R LL +KL FW A L AV
Sbjct: 642 -LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 620 HLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIG 679
LINR P + LQ +P ++ +VFGC + + R+KL+ + R+ VF+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 680 YGQDQFGYRFFDPLQKKMIRSRDAVFVE 707
Y G +D +++ SR VF E
Sbjct: 761 YKSGFKGSVLYDLHTREIFISRHVVFHE 788
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 3/134 (2%)
Query: 815 EPECFEEAMESEHKRNWIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHS 874
EP+ + EA + E W +AMQ E+ +L T++ W++++K
Sbjct: 911 EPKSYTEANKFE---CWRQAMQVELTALENTGTWKIIDLPSNAKPIGCRWIYKVKHHADG 967
Query: 875 SQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIRTVLGMAASFDLEIEQMDVKTAFLH 934
+ R+KARLV KG+NQ +G+D+ + +SPV K T+IR VL +A+ + + Q+DV AFLH
Sbjct: 968 TIERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIRLVLALASLNNWHLHQLDVNNAFLH 1027
Query: 935 GDLEEEIYMEQPEG 948
GDL+E++YM+ P G
Sbjct: 1028 GDLQEDVYMDIPPG 1041
>IMGA|Medtr8g044870.1 Reverse transcriptase, identical
chr08_pseudomolecule_IMGAG_V3 10146606-10147487 H
EGN_Mt090430 20090702
Length = 293
Score = 175 bits (443), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 158/303 (52%), Gaps = 13/303 (4%)
Query: 835 MQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGI 894
MQ E+ +L + T++ W+F+IK S R+KARLV KG+NQ +G+
Sbjct: 1 MQSEITALEQTGTWKIVDLPPAVKPIGCRWIFKIKHNVDGSIERYKARLVAKGYNQIEGL 60
Query: 895 DFDEIFSPVVKMTSIRTVLGMAASFDLEIEQMDVKTAFLHGDLEEEIYMEQPEGFIKKGK 954
D+ + +SPV K+T++R ++ +A+ + Q DV AFLHG+L+E++YM P G +
Sbjct: 61 DYFDTYSPVAKLTTVRFIIALASINHWHLHQFDVNNAFLHGELQEDVYMIIPPG-VPHSH 119
Query: 955 EDYVCKLKKSLYGLKQAPRQWYKKFEFVMGKQGYKKTTSDQCVFVKKFSXXXXXXXXXXX 1014
+D VCKL KSLYGL+QA +WY+K ++ GYK+ SD +F+K +
Sbjct: 120 QDEVCKLNKSLYGLQQASMKWYEKLTNILISTGYKQAASDASLFIKH-THSSFTILLVYV 178
Query: 1015 XXXXXXGQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWLSQEKYIEKV 1074
G N++K L +F +KD+G K LG+++ ++ + L Q KY +
Sbjct: 179 DDVILAGDTLSEFNTIKGVLHDAFKIKDIGQLKYFLGLEVAHSK--SGISLCQRKYCLDL 236
Query: 1075 LQRFKMENSKAVSCPLANHFKLSSKQCPSTDGEKEVMEKIP-YASAVGSLMYAMVCTRPD 1133
L+ + SK ++ P KL + PS IP Y +G L+Y + TRPD
Sbjct: 237 LEDSGLTGSKPMNTPSDPSIKLHNDSAPS-------FPDIPAYRRLIGRLLY-LNTTRPD 288
Query: 1134 IAH 1136
I +
Sbjct: 289 ITY 291
>IMGA|AC235005_1.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold AC235005.1 3152-790 H
EGN_Mt090430 20090702
Length = 772
Score = 172 bits (435), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 127/426 (29%), Positives = 198/426 (46%), Gaps = 44/426 (10%)
Query: 295 SWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKD 354
SW+IDSGA H + +F+S+ +V + +G + V G++ L L
Sbjct: 350 SWIIDSGANDHVCFSKTHFTSFYKIKPVLVTLPNGTSIYVHYAGNVHFTP----YLHLTH 405
Query: 355 VVHVPDMHSNLISVGRLDAENFCST-FRNGKWKL--TKGSMVIANGKKDPKLY--VMH-- 407
V++ P+ NLISV ++ CS F + K + +I G K LY MH
Sbjct: 406 VLYSPEFKVNLISVSKICDSLSCSVNFVSNKCVIQDVTSQRMIGLGDKSDGLYKLSMHFV 465
Query: 408 --------------AKLSRDAFNVAEDDSAV-------------ELWHKRLGHMSEKGMT 440
K++ A N++ + LWH RLGH+S + ++
Sbjct: 466 NQQLQLHNSFKPLPNKVAHSACNISTSSLSKSSTVFYSSRIPESALWHFRLGHLSNQRLS 525
Query: 441 TLVKNNMLSGLDKVHLEKYSDCMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPLMMSY- 499
T+ + + + + C + ++ F S S + L+H D+ GPL ++Y
Sbjct: 526 TMSR--LYPSIIVDNKAACDICHFARHKKLPFPHSS-SHANSKFQLLHFDIWGPLAINYV 582
Query: 500 GGNRYFVTFINDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTG 559
G++YF+T ++DH+R W+ LKSK +V K F+ L+E Q K IRTDNG E+
Sbjct: 583 HGHKYFLTIVDDHTRFLWIILLKSKAEVPIHIKNFIALIENQFHITPKIIRTDNGSEFL- 641
Query: 560 PFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAV 619
F GI HQ + +TPQ NG ER ++ ++ R LL +KL FW A L AV
Sbjct: 642 -LHDFYASKGILHQRSCVETPQQNGRVERKHQHILNIGRALLYQSKLPLSFWSYAFLHAV 700
Query: 620 HLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIG 679
LINR P + LQ +P ++ +VFGC + + R+KL+ + R+ VF+G
Sbjct: 701 FLINRVPTLVLQNQSPYQLLYDSSPDVTTFKVFGCLCYASSLQSHRTKLETRARKSVFLG 760
Query: 680 YGQDQF 685
Y F
Sbjct: 761 YKNFYF 766
>IMGA|Medtr4g062320.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 12039092-12042104 H
EGN_Mt090430 20090702
Length = 945
Score = 157 bits (397), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 124/418 (29%), Positives = 192/418 (45%), Gaps = 32/418 (7%)
Query: 296 WVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKDV 355
W +DSGA H + F+S+ N V + +G + V G I + L++V
Sbjct: 379 WFLDSGANEHIVNNTHWFTSFHKINPRPVNLPNGSSVLVEYAGTIRFTPQ----FYLENV 434
Query: 356 VHVPDMHSNLISVGRLDAENFCSTFRNGKWKLTK---GSMVIANGKKDPKLYVMHAKLSR 412
++ P NLIS+ ++ + C + K L + +I G++
Sbjct: 435 LYSPSFTLNLISIFKVCSSLNCYAIFHNKQCLLQDLHSQKMIGLGEQ------------- 481
Query: 413 DAFNVAEDDSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKYSD-CMAGKQNRVA 471
F V SA LWH RLGH+S K L+ + L V + D C KQ ++
Sbjct: 482 --FGVYYSYSA--LWHFRLGHVSPK---RLIHMSQLYPTLTVDVHATCDICHFAKQKKLP 534
Query: 472 FKISQPSRMKNVLDLVHSDLCGPL-MMSYGGNRYFVTFINDHSRKTWVYTLKSKDQVLDV 530
F S S +L+H D+ GPL + S +RYF+T ++D+SR W+ LKSK +V
Sbjct: 535 FSNSI-SVASIKFELLHFDIWGPLSITSIHNHRYFLTILDDYSRYVWIVLLKSKSEVSQH 593
Query: 531 FKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMN 590
K F+NL++ Q K +R+DNG E+ +F GI H + +TPQ NG ER +
Sbjct: 594 VKNFINLIQTQYNITPKTVRSDNGPEFL--LHSFYASKGIVHHRSCVETPQQNGRVERKH 651
Query: 591 RTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLR 650
+ ++ R LL +KL +W ALL A +INR L +P ++ + +
Sbjct: 652 QHILNVGRALLYQSKLPVSYWSYALLHATFIINRVTSPTLHNKSPYQLLHDTIPAEHIFK 711
Query: 651 VFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVEN 708
VFG + R+KL + R+ VF+GY GY D +++ SR F E+
Sbjct: 712 VFGSLCYSTTLHSHRTKLSARARKSVFLGYTVGFKGYVLLDIHTREIHISRHVQFYEH 769
>IMGA|Medtr5g103970.1 Polynucleotidyl transferase, Ribonuclease H
fold chr05_pseudomolecule_IMGAG_V3 41676281-41681462 E
EGN_Mt090430 20090702
Length = 479
Score = 153 bits (387), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/423 (27%), Positives = 187/423 (44%), Gaps = 22/423 (5%)
Query: 484 LDLVHSDLCGPLMM-SYGGNRYFVTFINDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQT 542
L+H D+ GPL + S G++YF+T ++DH+R W+ LK+K +V K F+ ++E Q
Sbjct: 40 FQLLHFDIWGPLAINSIHGHKYFLTIVDDHTRFLWIILLKTKAEVPMHIKNFIVMIENQF 99
Query: 543 GKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLS 602
K IRTDNG E+ F GI HQ++ +TPQ NG ER ++ ++ R LL
Sbjct: 100 HVTPKIIRTDNGSEFL--LHEFYASKGILHQSSCVETPQQNGRVERKHQHILNIGRALLY 157
Query: 603 HAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPK 662
+KL FW A L AV LINR L +P + +VFGC + +
Sbjct: 158 QSKLPLSFWSYAFLHAVFLINRITTPVLHNFSPYHLLYDSPPDITTFKVFGCLCYASSLQ 217
Query: 663 DERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVE----------NQTIE 712
+KL+ + R+ VF+GY GY +D +++ SR VF E +Q++
Sbjct: 218 SHITKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHECVLPYKSISSSQSL- 276
Query: 713 DVETTQKEAADRSENDSTDVQIVPPTTEQ--RQVGDEDXXXXXXXXXXXXXXXXYQNEPE 770
D E ++ +D+ P T E +N+
Sbjct: 277 DWEYFTSISSPPIIPSVSDISHSPSTIESVPHTQPTTTTTPTNDPSPPPPIRCSSRNKIS 336
Query: 771 EDFDDVHVQPPAPEGS--QTLRRSSRVRQPSTRYSANEYVL-MTDGGEPECFEEAMESEH 827
+ ++ P S S+ V + + ++L + EP+ + EA + E
Sbjct: 337 PSYLKDYICPHKSSTSVNNLYSISNYVSYHNISNPHSHFILSLHAHNEPKTYTEANKFE- 395
Query: 828 KRNWIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKG 887
W +AMQ E+ +L T++ W+++IK + R+KARLV KG
Sbjct: 396 --CWRQAMQVELTALENTGTWKIIDSPPNAKPIGCRWIYKIKHHADGTIERYKARLVAKG 453
Query: 888 FNQ 890
+NQ
Sbjct: 454 YNQ 456
>IMGA|Medtr4g157510.1 Retrotransposon gag protein; Polynucleotidyl
transferase, Ribonuclease H fold
chr04_pseudomolecule_IMGAG_V3 39272474-39269703 H
EGN_Mt090430 20090702
Length = 847
Score = 150 bits (379), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 124/432 (28%), Positives = 191/432 (44%), Gaps = 56/432 (12%)
Query: 282 FIEDTINLATQETSWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDIC 341
I T + + W++DSGA H F+SY + +V + DG ++ V G I
Sbjct: 348 IINSTTCSSLSNSYWLVDSGANEHICRDLNLFTSYHAISPSIVTLPDGSIVTVTHAGYIN 407
Query: 342 LETENGXRLILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLTKGSMVIANGKKDP 401
+ L +V++ NL+SV ++ E+ TF + P
Sbjct: 408 FSPQ----FYLTNVLYSSSFRLNLMSVHKV-CESLSCTF-----------------QFLP 445
Query: 402 KLYVMHAKLSRDAFNVAEDDSAVELWHKRLGHMSEKGMTTLVKNNMLSGL--DKVHLEKY 459
++ S +A + +LGH+S + M NM+S L + V K
Sbjct: 446 NQCIIQDSTSLKMIGLANQQDGL----YKLGHLSHQRM------NMMSSLYSNIVSDNKN 495
Query: 460 S---DCMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPL-MMSYGGNRYFVTFINDHSRK 515
S C KQ + F IS N +L+H D+ GPL + S G++YF+T ++DHSR
Sbjct: 496 SVCDICHFAKQKHLPFSISTSHATSN-FELLHLDIWGPLSISSIHGHKYFLTIVDDHSRF 554
Query: 516 TWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTT 575
W+ +LK+K V K F+ +V+ Q KCIR+DNG E+ +F + GI HQ +
Sbjct: 555 LWIISLKTKSGVSHHVKSFIKMVQTQFHVTPKCIRSDNGPEFL--ILSFYESLGILHQKS 612
Query: 576 PPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTP 635
+TPQ NG ER + ++ R LL +KL +W ALL AV LINR P L+ +P
Sbjct: 613 CVETPQQNGRVERKHHHILNVGRALLYQSKLPASYWSYALLHAVFLINRKPTPLLEGQSP 672
Query: 636 ERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQK 695
K D +++ + R+ VF+GY G+ D +
Sbjct: 673 YYALHHKFPDIDTF---------------KNQASTRARKTVFLGYKSGYKGFILLDIHSR 717
Query: 696 KMIRSRDAVFVE 707
++ SR VF E
Sbjct: 718 EIFVSRHVVFHE 729
>IMGA|Medtr5g086550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33218578-33217607 H EGN_Mt090430 20090702
Length = 309
Score = 149 bits (377), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 89/304 (29%), Positives = 157/304 (51%), Gaps = 25/304 (8%)
Query: 1021 GQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKM 1080
G ++ I + K+ L + F MKDLGP K LG+++ R L++ Q KY +L KM
Sbjct: 14 GNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELARG--ANGLFMCQRKYTLDILDECKM 71
Query: 1081 ENSKAVSCPLANHFKLSSKQCPSTDGEKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGV 1140
+ K + P+ + KL + P+ Y + L+Y + P+I +SV +
Sbjct: 72 LDCKPSTFPMEQNQKLVLDKGPTCSDPSR------YRRLISRLIYLTI-MHPEITYSVHI 124
Query: 1141 VSRFLSNPGKEHWAAVKWIFRYLRGTTKVCLCFGDEKPI-LVGYTDADMAGDVDSRKSTS 1199
++ + RYL+ + + E + LV Y D+D A +R+STS
Sbjct: 125 LTM--------------RVLRYLKSSPGQGIILPKENDLQLVAYCDSDWASCPLTRRSTS 170
Query: 1200 GYLITFAGGAVSWQSRLQKCVALSTTEAEFIALTEACKELLWMKKFLNELGIHQER-YLI 1258
GYL+ +SW+++ Q V+ S++EAE+ A+ +A E++W++ L+ L +H + ++
Sbjct: 171 GYLMKLGSAPISWKTKKQSTVSKSSSEAEYRAMGQAVSEVIWLRSLLSSLQVHYDSPTVL 230
Query: 1259 FCDSQSAIHLGKNSSFHSRSKHIDVRYHWIRDVLEMKQLQLEKIHTDENGSDMLTKILPK 1318
CD+Q+A+HL N +H R+KHI+V H+IR L+ + + T + +D+ TK L
Sbjct: 231 LCDNQAAMHLAANPVYHERTKHIEVDCHFIRTHLQEGTISTSYVPTKKQQADIFTKALGA 290
Query: 1319 DKFE 1322
+F+
Sbjct: 291 KQFQ 294
>IMGA|Medtr3g058930.1 Polynucleotidyl transferase, Ribonuclease H fold
chr03_pseudomolecule_IMGAG_V3 13084099-13087565 H
EGN_Mt090430 20090702
Length = 563
Score = 147 bits (372), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 179/351 (50%), Gaps = 59/351 (16%)
Query: 949 FIKKGKEDY---VCKLKKSLYGLKQAPRQWYKKFEFVMGKQGYKKTTSDQCVFVKKFSXX 1005
F+KK DY V KL K+LYGLKQAPR W K+ E +QG+KK ++ V+VK
Sbjct: 253 FLKKEGFDYTEVVFKLNKALYGLKQAPRAWNKRIEKFFVEQGFKKCLAEHGVYVKGSE-- 310
Query: 1006 XXXXXXXXXXXXXXXGQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWL 1065
G + I+ ++I R TK L L
Sbjct: 311 --------------------------------------GTSLLIICLEILRT--TKGLIL 330
Query: 1066 SQEKYIEKVLQRFKMEN-SKAVSCPLANHFKLSSKQCPSTDGEKEVMEKIPYASAVGSLM 1124
+Q KY ++ ++F M + + +++ AN+ ++ D ++ ++ +G L
Sbjct: 331 NQTKYDTEIQKKFNMLDFNSSITLAYANNINEVKEEDKGVD--PTILRRL-----IGLLR 383
Query: 1125 YAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRYLRGTTKVCLCFGD----EKPIL 1180
Y + +R DI++SVG+VS+F+SNP K H+ A K I RY+ GT + + F + E+ +
Sbjct: 384 Y-LCQSRLDISYSVGIVSKFMSNPLKTHFLAAKKIIRYIHGTLQYGILFPEAQETEQLSM 442
Query: 1181 VGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVALSTTEAEFIALTEACKELL 1240
+ Y+DAD D R+ T+ +L G +SW S+ Q VALS+ E E++ + A +
Sbjct: 443 IDYSDADWCRDKRDRRRTTSFLFMLQGAPISWSSKKQPIVALSSCEVEYVVGSSAACQAN 502
Query: 1241 WMKKFLNELGIHQERYL-IFCDSQSAIHLGKNSSFHSRSKHIDVRYHWIRD 1290
W++ L + I ++ + + D++ AI+L KN H +SKHI+ ++H++RD
Sbjct: 503 WLQNVLEQSMIKLKQPIKLLIDNKYAINLAKNHISHGKSKHIETKFHYLRD 553
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 93/355 (26%), Positives = 153/355 (43%), Gaps = 48/355 (13%)
Query: 597 VRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKA 656
VR +L K+ FWG A+ TA +++NR P ++ PE +WS + S +L+VFG
Sbjct: 2 VRSMLKEKKIPHEFWGAAVNTATYILNRCPTKKMKDKVPEEIWSRRKPSISNLKVFGSIF 61
Query: 657 FVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVENQTIEDVET 716
+ H+P R KL+ KT + +GY + YR D KK+ +R DV+
Sbjct: 62 YKHVPDSRRKKLEDKTEAMILVGY-HNTGAYRLLDLHSKKISITR-----------DVKV 109
Query: 717 TQKEAADRSENDSTDVQIVPPTTEQRQVGDEDXXXXXXXXXXXXXXXXYQNEPEEDFDDV 776
++E D + N+ + V E ++ DE NE E ++V
Sbjct: 110 LEEEYWDWNSNECS-VYEKNVIIENKKESDE----------------LLTNE-EVISEEV 151
Query: 777 HVQPPAPEGSQTLRRSSRVRQPSTRYSANEYVLMTD--GGEPECFEEAMESEHKRNWIEA 834
+ P T+ R R +Q R + V D G + E AM + K +
Sbjct: 152 SYEEPT-----TIARPQRNKQMLRRLQDCQ-VTGDDEIGSDGELVHFAMLVDTKPLY--- 202
Query: 835 MQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGI 894
++KS +N+T+E WVF++K + KARLV + F +++G
Sbjct: 203 ---KLKSSGKNQTWELIKLTDGKKAIDVKWVFKLKLNPEGKIVKHKARLVARVFLKKEGF 259
Query: 895 DFDEIFSPVVKMTSIRTVLGMAA-SFDLEIEQMDVKTAFLHGDLEEEIYMEQPEG 948
D+ E+ V K+ L A +++ IE+ V+ F E +Y++ EG
Sbjct: 260 DYTEV---VFKLNKALYGLKQAPRAWNKRIEKFFVEQGFKKCLAEHGVYVKGSEG 311
>IMGA|Medtr7g045790.1 Polynucleotidyl transferase, Ribonuclease H
fold chr07_pseudomolecule_IMGAG_V3 11036769-11039177 H
EGN_Mt090430 20090702
Length = 710
Score = 137 bits (344), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 110/404 (27%), Positives = 166/404 (41%), Gaps = 51/404 (12%)
Query: 537 LVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMER 596
++E Q K IRTDNG E+ F GI HQ + +TPQ NG ER ++ ++
Sbjct: 1 MIENQFHVTPKIIRTDNGSEFL--LHEFYASKGILHQRSCVETPQQNGRVERKHQHILNI 58
Query: 597 VRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKA 656
R LL +KL FW A L AV LINR P L +P + +VFGC
Sbjct: 59 GRALLYQSKLPLSFWSYAFLHAVFLINRIPTPVLHNFSPYHLLYDSPPDITTFKVFGCLC 118
Query: 657 FVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRSRDAVFVENQTIEDVET 716
+ + R+KL+ + R+ VF+GY GY +D +++ SR VF E +
Sbjct: 119 YASSLQSHRTKLETRARKSVFLGYKLGFKGYVLYDLHTREIFISRHVVFHEC-VLPYKSI 177
Query: 717 TQKEAADRSENDSTDVQIVPPTTEQRQVGDEDXXXXXXXXXXXXXXXXYQNEPEEDFDDV 776
+ ++ D S ++ P+ + N+P
Sbjct: 178 SSSQSLDWEYFTSISSLLIIPSVS--DISHSPSTTKYVPHTQPTTTTTPTNDPS------ 229
Query: 777 HVQPPAPEGSQTLRRSSRVR-QPS----------------TRYSANEYVLMTDGGEPECF 819
+PP +R SSR + PS YS + YV + P
Sbjct: 230 --RPPP------IRCSSRNKISPSYLKDYICPHKSSTSVNNLYSISNYVSYHNISNPH-- 279
Query: 820 EEAMESEHKRN-------------WIEAMQEEMKSLHENKTFEXXXXXXXXXXXXXXWVF 866
+ S H N W +AMQ E+ +L T++ W++
Sbjct: 280 SHFILSLHAHNEPKTYTEANKFECWRQAMQVELTALENTGTWKIIDSPPNAKPIGCRWIY 339
Query: 867 RIKQEEHSSQPRFKARLVVKGFNQRKGIDFDEIFSPVVKMTSIR 910
+IK + R+KARLV KG+NQ +G+D+ + +SPV K T+IR
Sbjct: 340 KIKHNADDTIERYKARLVAKGYNQVEGLDYFDTYSPVAKHTTIR 383
Score = 129 bits (324), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 101/354 (28%), Positives = 157/354 (44%), Gaps = 47/354 (13%)
Query: 968 LKQAPRQWYKKFEFVMGKQGYKKTTSDQCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVRI 1027
++ A R+WY+K ++ GYK+ ++D +F+K S G +
Sbjct: 382 IRLASRKWYEKLASLLVNHGYKQASADHSLFIKH-STTQFTALLVYVDDIILAGNSLDEF 440
Query: 1028 NSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVS 1087
+K L SF +KDLG K LG+++ ++ + L Q KY +L + +SK V+
Sbjct: 441 TFIKNILHNSFKIKDLGQLKYFLGLEVAHSKL--GISLCQRKYGLDLLSDTGLLDSKPVA 498
Query: 1088 CPLANHFKLSSKQCPSTDGEKEVMEKIP-YASAVGSLMYAMVCTRPDIAHSVGVVSRFLS 1146
P KL P + IP Y VG L+Y + TRPDI +S+FLS
Sbjct: 499 TPSDPSIKLYHDDSP-------LYTDIPAYRRLVGRLLY-LNATRPDITFITQQLSQFLS 550
Query: 1147 NPGKEHWAAVKWIFRYLRGTTKVCLCFGDEK-PILVGYTDADMAGDVDSRKSTSGYLITF 1205
P + H+ A + RYL+ L F P + GY+DAD AG D+R+S SG
Sbjct: 551 KPTQTHYNAALRVLRYLKTCPGKGLHFPRSSLPYIQGYSDADWAGCRDTRRSISGQCFFL 610
Query: 1206 AGGAVSWQSRLQKCVALSTTEAEFIALTEACKELLWMKKFLNELGIHQERYLIFCDSQSA 1265
+SW+++ Q V+ S++EAE+ AL A
Sbjct: 611 GDSLISWRTKKQLTVSRSSSEAEYRALGAAT----------------------------- 641
Query: 1266 IHLGKNSSFHSRSKHIDVRYHWIRDVLEMKQLQLEKIHTDENGSDMLTK-ILPK 1318
N FH R+KH+++ H +R+ L ++L I + +D TK ILP+
Sbjct: 642 ----SNPVFHERTKHLEIDCHIVREKLAAGIMKLLPISSKNQLADCFTKSILPQ 691
>IMGA|Medtr2g038510.1 Polynucleotidyl transferase, Ribonuclease H
fold chr02_pseudomolecule_IMGAG_V3 10761249-10763836 E
EGN_Mt090430 20090702
Length = 772
Score = 133 bits (334), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 111/408 (27%), Positives = 176/408 (43%), Gaps = 53/408 (12%)
Query: 296 WVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKDV 355
W+IDSGA H S F SY V + +G + V G + + V
Sbjct: 389 WLIDSGANEHICSSLHLFHSYYRIKPICVNLPNGSSVIVQYAGTVVFSPH----FHITHV 444
Query: 356 VHVPDMHSNLISVGRL-DAENFCSTFRNGKWKL--TKGSMVIANGKKDPKLYVMH--AKL 410
++ P LISV ++ + + F + + K +I G LY +H A
Sbjct: 445 LYSPSFKVYLISVSKICQSLPYHVHFLLNTYVIQDVKTQKMIGLGNLCDGLYRLHPFAPA 504
Query: 411 SRDAFNVAEDDSAVE--------------------LWHKRLGHMSEKGMTTLVKNNMLSG 450
S A ++ S +WH RLGH+S + ++ M S
Sbjct: 505 SPQAHFISSAVSPTNKMSCNSVSSNNNVSSIPSNAIWHFRLGHLSNQRLSM-----MHSL 559
Query: 451 LDKVHLEKYSDCMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPL-MMSYGGNRYFVTFI 509
+ ++ + +A + +L+H D+ GPL + S G++YF+T +
Sbjct: 560 YSSITIDNKAYSIASSK----------------FELLHFDIWGPLSVTSVHGHKYFLTIV 603
Query: 510 NDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHG 569
+D SR WV LK+K +V + K F+ L+ K IR+DNG E+ P F G
Sbjct: 604 DDFSRFLWVILLKNKSEVSNHVKNFVVLIHTHYQITPKYIRSDNGPEFLIP--EFYASKG 661
Query: 570 IRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVP 629
I HQ + +TPQ NG ER ++ ++ R LL +KL FW A++ AV LIN+ P
Sbjct: 662 IIHQKSCVETPQQNGRVERKHQHILNVARALLFQSKLPNFFWSYAVIHAVFLINKVPTPL 721
Query: 630 LQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVF 677
+ +P ++ + +VFGC F +RSKL + R+ +F
Sbjct: 722 FKQKSPYQLLYDSLPDINSFKVFGCLCFASTLLAQRSKLQSRARKSIF 769
>IMGA|Medtr7g025490.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr07_pseudomolecule_IMGAG_V3 6252058-6249983
H EGN_Mt090430 20090702
Length = 509
Score = 126 bits (317), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/365 (24%), Positives = 154/365 (42%), Gaps = 75/365 (20%)
Query: 927 DVKTAFLHGDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLYGLKQAPRQWYKKFEFVMGKQ 986
D FLHGDL+E++YM P+G + + VCKL KSLYGLKQA R+W++K ++
Sbjct: 204 DANNTFLHGDLQEDVYMHPPQG-VSPPRPGQVCKLLKSLYGLKQASRRWFEKLISLLLTI 262
Query: 987 GYKKTTSDQCVFVKKFSXXXXXXXXXXXXXXXXXGQNSVRINSLKKQLSKSFAMKDLGPA 1046
G+ + ++D ++
Sbjct: 263 GFVQASADHSFLIR-------------------------------------------ASP 279
Query: 1047 KQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVSCPLANHFKLSSKQCPSTDG 1106
+ I +K + L Q KY +L + K+VS PL L P D
Sbjct: 280 TSFTALLIYVAHSSKGISLCQRKYCLDLLSDAGLTTCKSVSTPLDYACLLHIDDGPPFD- 338
Query: 1107 EKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRYLRGT 1166
+ + Y +G L+Y + TRPDI+ + +S+F++ P H + RYL+
Sbjct: 339 -----DVLAYRCLIGCLLY-LTTTRPDISFATQQLSQFMAKPSVNHHRTALCVLRYLQVC 392
Query: 1167 TKVCLCFGDEKPI-LVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVALSTT 1225
L F + L+G++DAD G VDSR+S +++Q + + + +
Sbjct: 393 PGRGLFFPRTSEMQLLGFSDADWGGCVDSRRS------------LAFQEAIHRFLFFLRS 440
Query: 1226 EAEFIALTEACKELLWMKKFLNELGIHQERYLIFCDSQSAIHLGKNSSFHSRSKHIDVRY 1285
+++ + H +++CD+QSA+H+ N F+ R+KH+D+
Sbjct: 441 GISCFSISHPRTPM-----------AHIRLSILYCDNQSALHIAANPVFYERTKHLDIDC 489
Query: 1286 HWIRD 1290
H +R+
Sbjct: 490 HIVRE 494
>IMGA|Medtr3g058920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 13083640-13084056 H
EGN_Mt090430 20090702
Length = 138
Score = 122 bits (306), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 83/121 (68%), Gaps = 2/121 (1%)
Query: 462 CMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPLMM-SYGGNRYFVTFINDHSRKTWVYT 520
C+ GK +R AFK R K+VL++VHSD+ GP+ + +Y GNRYF+TF++++S+ W+Y
Sbjct: 18 CLVGKHSRSAFKSELKMRAKHVLNVVHSDIYGPIKVPTYSGNRYFITFVDEYSKMLWLYL 77
Query: 521 LKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGP-FDAFCKEHGIRHQTTPPKT 579
+K K L+VFK+F L E+Q+G KLK + T GGEYT F+++C GI H+ T P T
Sbjct: 78 IKLKSDALEVFKKFKVLPEKQSGMKLKILITYGGGEYTSKDFESYCTNQGIIHEVTTPYT 137
Query: 580 P 580
P
Sbjct: 138 P 138
>IMGA|Medtr4g157500.1 polyprotein-like, putative
chr04_pseudomolecule_IMGAG_V3 39269652-39268814 H
EGN_Mt090430 20090702
Length = 260
Score = 117 bits (293), Expect = 3e-26, Method: Composition-based stats.
Identities = 82/247 (33%), Positives = 123/247 (49%), Gaps = 13/247 (5%)
Query: 1021 GQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKM 1080
G + +K L SF +KDLG K +LG+++ ++ + + L Q KY +L
Sbjct: 24 GNSLSEFQHIKSILHSSFKIKDLGQLKYVLGLEVAHSK--QGISLCQRKYCLDLLSDSGT 81
Query: 1081 ENSKAVSCPLANHFKLSSKQCPSTDGEKEVMEKIP-YASAVGSLMYAMVCTRPDIAHSVG 1139
NSK VS KL + P E IP Y +G L+Y + TRPDI
Sbjct: 82 INSKPVSTSSDASLKLHNDSSPP-------YEDIPSYRRLIGRLLY-LNSTRPDITFITQ 133
Query: 1140 VVSRFLSNPGKEHWAAVKWIFRYLRGTTKVCLCFGDEKPI-LVGYTDADMAGDVDSRKST 1198
+S+FLS P + H A + +YL+ L F + L G++D D AG VDSR+S
Sbjct: 134 QLSQFLSKPTQTHHNAALRVLKYLKCCPGKGLFFPRNSSLHLQGFSDVDWAGCVDSRRSI 193
Query: 1199 SGYLITFAGGAVSWQSRLQKCVALSTTEAEFIALTEACKELLWMKKFLNELGIHQERY-L 1257
SG +SW+++ Q V+ S++EAE+ AL A EL W+ L +L I + +
Sbjct: 194 SGQCFFIGNSLISWRTKKQTTVSRSSSEAEYRALASATCELQWILYLLKDLNIQSSKLPV 253
Query: 1258 IFCDSQS 1264
+FCD+Q+
Sbjct: 254 LFCDNQN 260
>IMGA|Medtr6g077130.1 Zinc finger, CCHC-type
chr06_pseudomolecule_IMGAG_V3 15158354-15162093 E
EGN_Mt090430 20090702
Length = 532
Score = 117 bits (293), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/413 (26%), Positives = 185/413 (44%), Gaps = 37/413 (8%)
Query: 5 TSKMISLNGANYHIWRNKMRDLLMVTKMHLPVFGSSKPAD-KTD----EEWAFEHEQVCG 59
S++ G N+ W ++ LL V + V KP + K+D E+W +VC
Sbjct: 38 VSRIEVFKGQNFRRWNERVFTLLDVHGV-ASVLTDVKPDEAKSDAKQIEKWN-NANKVCR 95
Query: 60 Y-IRQFVDDNVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQEGTSVAD 118
+ I + D +++ C+ A+ +WD + Y ++ Q F +
Sbjct: 96 HTILSTISDALFDVYCSYKVAKDIWDNMNVKYTAEEATKQKFVI---------------- 139
Query: 119 HLSEMQVTIHQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTLHSGLSWEFVKNA 178
+E I +L I D + ++ LP SW+ K + + H +S +
Sbjct: 140 --NEYHQLIEELKAENIILPDVFVAAALVEKLPSSWDDYKQQLKHK--HKQMSLNDLIRH 195
Query: 179 VLNEEMRRKAQNLSSSQSDILLADAKRNNHSRGRSQSRSSNTRDKSRGRSNKF--ANI-V 235
++ E+ RK + +++ A+ +NN R Q R N D + +N AN+
Sbjct: 196 IIIEDTSRKECGAARAKALESRANLIQNN---ARKQQRYENKSDHALKVTNPNFKANLGE 252
Query: 236 CHHCGKKGHIKRYCRKFKSDQEKIKGKAKKEESSDDEANVIAEFQLFIEDTINLATQETS 295
C+ CGKKGH +CR K + + K KA + D + + I ++L
Sbjct: 253 CYVCGKKGHKAYHCRYRKVNGQPPKPKANLTQGDDKKYDDDDVIAAVIS-KVHLVNDVQK 311
Query: 296 WVIDSGATLHATSXRENFSSYTP--DNLGMVKIADGKLLKVVGKGDICLETENGXRLILK 353
WV+DSGAT H + RE F+SY D+ V + D + V GKG + L+ +G L L
Sbjct: 312 WVVDSGATRHICAKREAFTSYISVGDDEDQVYLGDSRTTAVNGKGKVILKLTSGKTLALS 371
Query: 354 DVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLTKGSMVIANGKKDPKLYVM 406
DV++VP + +NLISV L+ +F + K ++K ++ + NG D L+V+
Sbjct: 372 DVLNVPTIRTNLISVALLNKVGVKVSFESDKMVMSKNNVFVGNGYCDQGLFVL 424
>IMGA|Medtr8g044860.1 Zinc finger, C2H2-type; Polynucleotidyl
transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 10143838-10146452 H
EGN_Mt090430 20090702
Length = 753
Score = 110 bits (275), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 107/427 (25%), Positives = 168/427 (39%), Gaps = 74/427 (17%)
Query: 289 LATQETSWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGX 348
L + W+IDSGA H S S+ V + +G + V G +
Sbjct: 326 LHVKSNYWLIDSGANEHICSSLSLLHSFYIIKPLHVTLPNGTSVLVHYAGTVSFSPHFH- 384
Query: 349 RLILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLTKGSMVIANGKKDPKLYVMHA 408
I ++ + D+ L + + NF F N ++ K S N
Sbjct: 385 --ITNKMIGLGDLCDGLCRLRIPASSNFSHCFVNN-FQCNKVSYESCNSV---------- 431
Query: 409 KLSRDAFNVAEDDSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKYSD------- 461
+ N + LWH RLGH+S N LS + ++ + + D
Sbjct: 432 -----SCNNNVHIPSTALWHFRLGHLS---------NQRLSQMHHLYPDIHVDNKFICDI 477
Query: 462 CMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPLM-MSYGGNRYFVTFINDHSRKTWVYT 520
C KQ ++ + S N +L++ D+ GPL +S G RYF+T ++DHSR W
Sbjct: 478 CHFAKQRKLPYNSSTSIASSN-FELLYLDIWGPLAKVSIHGQRYFLTIVDDHSRFLWTIL 536
Query: 521 LKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTP 580
K+K +V + F+ L++ + K IR+DNG + AF GI HQ + +TP
Sbjct: 537 FKNKSEVPSHIQHFIYLIQNKHKVTPKIIRSDNGHVFL--LSAFYASQGIIHQRSCVETP 594
Query: 581 QLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVWS 640
Q N V LINR P + L+ +P +V
Sbjct: 595 QHN-----------------------------------VFLINRVPTLVLENKSPYQVLY 619
Query: 641 GKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIRS 700
+ +VFGC + + R+KL + R+ VF+GY G +D K++ S
Sbjct: 620 KTLPDINSFKVFGCLCYASTLQSHRTKLQSRARKSVFLGYKSGYKGSFLYDLNTKEIFMS 679
Query: 701 RDAVFVE 707
R+ F E
Sbjct: 680 RNVTFHE 686
>IMGA|Medtr1g013560.1 Polynucleotidyl transferase, Ribonuclease H
fold chr01_pseudomolecule_IMGAG_V3 2535883-2538036 H
EGN_Mt090430 20090702
Length = 680
Score = 107 bits (267), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 95/178 (53%), Gaps = 8/178 (4%)
Query: 459 YSDCMAGKQNRVAFKISQPSRMKNVLDLVHSDLCGPL-MMSYGGNRYFVTFINDHSRKTW 517
Y C K + F PS NV+ + + + GPL + S G+RYF+T ++DH+R W
Sbjct: 494 YPSC---KSSNFEFSALSPSSC-NVVS-ISNYIWGPLSVASVHGHRYFLTILDDHTRFLW 548
Query: 518 VYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPP 577
V LK+K +V K F+ +++ K IRTDNG E+ P +F HGI HQ +
Sbjct: 549 VILLKTKAEVSSHVKNFITMIQNHFHTTPKFIRTDNGPEFMLP--SFYASHGIIHQKSCV 606
Query: 578 KTPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTP 635
+TPQ NG ER ++ ++ R LL +KL FW A+ AV LINR P L +P
Sbjct: 607 ETPQQNGRVERKHQHILNVGRALLYQSKLPPSFWSYAIHHAVFLINRVPTPLLHNQSP 664
>IMGA|Medtr3g089920.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 21314429-21315168 H
EGN_Mt090430 20090702
Length = 210
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 90/188 (47%), Gaps = 40/188 (21%)
Query: 521 LKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYT-GPFDAFCKEHGIRHQTTPPKT 579
+K + FKQ L+E Q GKK+K ++ DNG E+ F+ FCK GI T
Sbjct: 1 MKHRSDASKNFKQLNALLENQFGKKVKRLQIDNGLEFCWSEFNEFCKTEGISRHHMVRNT 60
Query: 580 PQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERVW 639
PQ N +A+RMN+TL+ER RC+LS+A L++ FWGE
Sbjct: 61 PQQNSVAKRMNQTLLERARCMLSNAGLTRTFWGET------------------------- 95
Query: 640 SGKDVSYDHLRVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMIR 699
FGC + + KL+ + ++ VF+GYG YR + P + ++I
Sbjct: 96 -----------GFGCTVYYRV---NEGKLESRAKKRVFVGYGDGVKEYRIWSPSENRVIL 141
Query: 700 SRDAVFVE 707
SR+ VF E
Sbjct: 142 SRNVVFDE 149
>IMGA|Medtr8g128710.1 Polynucleotidyl transferase, Ribonuclease H
fold chr08_pseudomolecule_IMGAG_V3 30179997-30181475 E
EGN_Mt090430 20090702
Length = 98
Score = 91.3 bits (225), Expect = 3e-18, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 59/91 (64%), Gaps = 2/91 (2%)
Query: 579 TPQLNGLAERMNRTLMERVRCLLSHAKLSKRFWGEALLTAVHLINRSPCVPLQYDTPERV 638
TPQ NG+AERMN+TL+E+ R +LS+ L++ FW EA+ T +L+NR P + T +
Sbjct: 5 TPQHNGVAERMNQTLLEKARYMLSNVGLTRTFWAEAVNTTCYLVNRGPHTSINLKTLYEL 64
Query: 639 WSGKDVSYDHLRVFGCKAFVHIP--KDERSK 667
W GK V Y +LRVFGC + H+ K ER K
Sbjct: 65 WPGKSVDYSNLRVFGCTVYYHVNEWKLERRK 95
>IMGA|Medtr3g044280.1 hypothetical retrotransposon, related
chr03_pseudomolecule_IMGAG_V3 12337068-12337358 H
EGN_Mt090430 20090702
Length = 96
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 417 VAEDDSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKYSDCMAGKQNRVAFKISQ 476
+ E VELWHKRL HM EK M L K+N+LS + HL+K C+ K+++V+F+
Sbjct: 1 MVESTEKVELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHS 60
Query: 477 PSRMKNVLDLVHSDLCGPLMM-SYGGNRYFVTFINDH 512
P R +LDLVH L GP+ + GG+ YF++FI+DH
Sbjct: 61 PKR-PTILDLVHCHLFGPMKTGTIGGSTYFLSFIDDH 96
>IMGA|Medtr5g082230.1 hypothetical retrotransposon, related
chr05_pseudomolecule_IMGAG_V3 30910887-30910597 H
EGN_Mt090430 20090702
Length = 96
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 2/97 (2%)
Query: 417 VAEDDSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKYSDCMAGKQNRVAFKISQ 476
+ E VELWHKRL HM EK M L K+N+LS + HL+K C+ K+++V+F+
Sbjct: 1 MVESTEKVELWHKRLCHMIEKDMVKLCKSNVLSDMSNPHLKKCDHCIVEKKSKVSFEFHS 60
Query: 477 PSRMKNVLDLVHSDLCGPLMM-SYGGNRYFVTFINDH 512
P R +LDLVH L GP+ + GG+ YF++FI+DH
Sbjct: 61 PKR-PTILDLVHCHLFGPMKTGTIGGSTYFLSFIDDH 96
>IMGA|Medtr6g069750.1 Reverse transcriptase, putative
chr06_pseudomolecule_IMGAG_V3 12976555-12977103 H
EGN_Mt090430 20090702
Length = 149
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 28/143 (19%)
Query: 835 MQEEMKSLHENKTFEXXXXXXXXXXXXXXWVFRIKQEEHSSQPRFKARLVVKGFNQRKGI 894
MQ E+ +L T++ W+++IK S R+KARLVVKG+NQ +G
Sbjct: 1 MQAEITALENTGTWKLVDLPPNVKPIGCRWIYKIKHYADGSIQRYKARLVVKGYNQVEGW 60
Query: 895 DFDEIFSPVVK----------------------------MTSIRTVLGMAASFDLEIEQM 926
D+ + +SPV K MT++RTV+ +A+ I ++
Sbjct: 61 DYFDTYSPVAKLTTARLVVKGYNQVEGWDYFDTYSLVAKMTTVRTVIALASINQWHIHKL 120
Query: 927 DVKTAFLHGDLEEEIYMEQPEGF 949
D +AFLHGDL+E++YM P+G
Sbjct: 121 DANSAFLHGDLQEDVYMLIPQGI 143
>IMGA|Medtr3g044270.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr03_pseudomolecule_IMGAG_V3
12336621-12336989 H EGN_Mt090430 20090702
Length = 122
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%)
Query: 273 ANVIAEFQLFIEDTINLATQETSWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLL 332
+N+ + +L + + ++ +SWVIDSG ++H S R+ FSSYT G VK+A +L
Sbjct: 7 SNLTYDNELLLVEEHDIVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEGVL 66
Query: 333 KVVGKGDICLETENGXRLILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLT 388
K VG D+ LE NG +L LKD HV D+ NL+SV +L E + S F WK++
Sbjct: 67 KCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr5g082240.1 Peptidase S8 and S53, subtilisin, kexin,
sedolisin chr05_pseudomolecule_IMGAG_V3
30911334-30910966 H EGN_Mt090430 20090702
Length = 122
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 69/116 (59%)
Query: 273 ANVIAEFQLFIEDTINLATQETSWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLL 332
+N+ + +L + + ++ +SWVIDSG ++H S R+ FSSYT G VK+A +L
Sbjct: 7 SNLTYDNELLLVEEHDIVDSASSWVIDSGISVHVISTRDVFSSYTSGEFGDVKLAHEGVL 66
Query: 333 KVVGKGDICLETENGXRLILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLT 388
K VG D+ LE NG +L LKD HV D+ NL+SV +L E + S F WK++
Sbjct: 67 KCVGHEDVNLEMSNGAKLTLKDEKHVLDIQLNLLSVAKLCDEGYDSLFLRDSWKIS 122
>IMGA|Medtr8g128700.1 Integrase, catalytic region
chr08_pseudomolecule_IMGAG_V3 30179122-30179823 H
EGN_Mt090430 20090702
Length = 193
Score = 82.8 bits (203), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 15/176 (8%)
Query: 353 KDVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLT-----KGSMVIANGKKDPKLYVMH 407
+D+ V D H++ V LD+ G+W LT G++V+A K LY +
Sbjct: 21 EDIALVVDGHTHYTDVWVLDSGASYHICPRGEWFLTYEQLDGGNIVMAASVKRGTLYFLQ 80
Query: 408 AKLSRD-----AFNVAEDDSAVELWHKRLGHMSEKGMTTLVKNNMLSGLDKVHLEKYSDC 462
D +F + ++D +LWH RLGHMSE+GM L K+N+L G K+ S+
Sbjct: 81 GTTLTDYGVVASFEIDQED-MTKLWHMRLGHMSERGMQILAKDNLLYG-HKIKDPGLSEH 138
Query: 463 MA-GKQNRVAFKISQPSRMKNVLDLVHSDLCGPLMM-SYGGNRYFVTFINDHSRKT 516
A GK++R F + R K LD +H D P + S GG++YF++ I+D+SR T
Sbjct: 139 YAFGKRHRNKF-LKVIHRTKGTLDYIHDDCWEPSRVESLGGHKYFLSLIDDYSRMT 193
>IMGA|Medtr3g110550.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
27872933-27871392 E EGN_Mt090430 20090702
Length = 256
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 112/244 (45%), Gaps = 42/244 (17%)
Query: 1021 GQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKITRNRRTKKLWLSQEKYIEKVLQRFKM 1080
G N+ + L L+ +F++KDLG K LG+++ + + L ++Q KY+ +L + M
Sbjct: 12 GNNTPLLQQLVSHLNSAFSLKDLGALKYFLGIEV-KPQSNGSLLITQSKYVRDLLAKTDM 70
Query: 1081 ENSKAVSCPLANHFKLSSKQCPSTDGEKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGV 1140
+ +K++ P+ + KLS DG + S V +L YA + +G
Sbjct: 71 QEAKSLPSPMISDLKLSK------DGSTPFSDPTLCRSIVRALQYA---------NLIGP 115
Query: 1141 VSRFLSNPGKEHWAAVKWIFRYLRGTTKVCLCFGDEKPI------LVGYTDADMAGDVDS 1194
+S + R+L+GT L +PI ++ Y DAD D D
Sbjct: 116 LSN---------------VLRHLKGTLSWGLLV---RPIPTYPLSILAYCDADWGSDPDD 157
Query: 1195 RKSTSGYLITFAGGAVSWQSRLQKCVALSTTEAEFIALTEACKELLWMKKFLNELGIHQE 1254
R + + +SW ++ Q +A S+TEAE+ +L A ELLW+K + L + Q+
Sbjct: 158 RSVDA--CVFLGPNLISWWAKKQAVIARSSTEAEYSSLALAKSELLWIKTYGARLKVIQK 215
Query: 1255 RYLI 1258
+ +
Sbjct: 216 KLFV 219
>IMGA|Medtr1g076760.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 15437706-15436255 H
EGN_Mt090430 20090702
Length = 186
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 58/95 (61%), Gaps = 13/95 (13%)
Query: 605 KLSK-RFWGEALLTAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKD 663
KLSK GEAL T VH++N SP V LQY+ +++W K++SYDHL VFGCK +
Sbjct: 102 KLSKGSMIGEALSTIVHVLNLSPSVSLQYEVRDKIWLRKNISYDHLCVFGCKTY------ 155
Query: 664 ERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKKMI 698
VK++ C+F+ Y D YRF+D KK+I
Sbjct: 156 ------VKSQHCMFLCYDLDGADYRFYDCDMKKLI 184
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 40/62 (64%)
Query: 332 LKVVGKGDICLETENGXRLILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLTKGS 391
LK VG G++ + NG +L LKDV +VPD+ NL+SV +L E + F WKL+KGS
Sbjct: 48 LKSVGLGEVKWKMSNGTKLTLKDVNYVPDIRLNLLSVAKLRDEGYDRLFSQYSWKLSKGS 107
Query: 392 MV 393
M+
Sbjct: 108 MI 109
>IMGA|CU571152_16.1 Polynucleotidyl transferase, Ribonuclease H fold
CU571152.5 61656-61988 H EGN_Mt090430 20090702
Length = 110
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 500 GGNRYFVTFINDHSRKTWVYTLKSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYT- 558
GG RYFV FI+D+S TW+Y +K++ ++ ++ F +++ Q K +K R DN EY
Sbjct: 2 GGARYFVLFIDDYSHFTWIYMIKNRHELTQIYINFAKMIQTQFSKVIKVFRRDNAMEYRD 61
Query: 559 GPFDAFCKEHGIRHQTTPPKTPQLNGLAERMNRTLMERVRCLLSHA 604
+F E G + + P T Q G AER +R +++ V +L A
Sbjct: 62 SKLLSFLSEQGTFSEFSYPYTSQQKGRAERKHRHILDSVCAMLISA 107
>IMGA|Medtr5g093020.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
36507044-36505941 H EGN_Mt090430 20090702
Length = 367
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 1220 VALSTTEAEFIALTEACKELLWMKKFLNELGIH-QERYLIFCDSQSAIHLGKNSSFHSRS 1278
V+ S++EAE+ A+ E+ W+ L + + L++CDSQSA H+ N+SFH R+
Sbjct: 249 VSKSSSEAEYRAMATTVCEIQWLTYLLQDFNLQFHTPALLYCDSQSARHIAANTSFHERT 308
Query: 1279 KHIDVRYHWIRDVLEMKQLQLEKIHTDENGSDMLTKIL 1316
KHI++ H +R+ L+ K L + + + +D+LTK L
Sbjct: 309 KHIELDCHIVREKLQQKLFHLLPVSSSQQLADVLTKPL 346
>IMGA|Medtr4g019480.1 Integrase, catalytic region
chr04_pseudomolecule_IMGAG_V3 3983257-3980975 H
EGN_Mt090430 20090702
Length = 102
Score = 67.8 bits (164), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 42/66 (63%)
Query: 470 VAFKISQPSRMKNVLDLVHSDLCGPLMMSYGGNRYFVTFINDHSRKTWVYTLKSKDQVLD 529
V+F S P + N+LDLVHSD+C S G YFVTFI+DHSRK + +KSK QV
Sbjct: 32 VSFHESSPHKRPNLLDLVHSDICMMDSKSIDGASYFVTFIDDHSRKVQTFVMKSKGQVPC 91
Query: 530 VFKQFL 535
+F Q +
Sbjct: 92 IFMQVI 97
>IMGA|Medtr8g044880.1 polyprotein-like, putative
chr08_pseudomolecule_IMGAG_V3 10147539-10149356 H
EGN_Mt090430 20090702
Length = 196
Score = 67.0 bits (162), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 84/167 (50%), Gaps = 21/167 (12%)
Query: 1159 IFRYLRGTTKVCLCFGDEKPILV-GYTDADMA-GDVDSRKSTSGYLITFAGGAVSWQSRL 1216
+ YL+G L F + + + GYT+AD A G D+R+S S
Sbjct: 3 VLSYLKGCPGKGLFFPRQSSLQIQGYTNADWAVGCKDTRRSIS----------------- 45
Query: 1217 QKCV-ALSTTEAEFIALTEACKELLWMKKFLNELGIHQERY-LIFCDSQSAIHLGKNSSF 1274
++C S++EAE+ AL A EL + L +L ++ + +++CD+QSAI++ N F
Sbjct: 46 EQCFFCWSSSEAEYRALASATCELQRLTYLLRDLKVNCIKPPVLYCDNQSAIYIAANPVF 105
Query: 1275 HSRSKHIDVRYHWIRDVLEMKQLQLEKIHTDENGSDMLTKILPKDKF 1321
H +KH+++ H +R+ L+ +L I + + +D TK L F
Sbjct: 106 HECTKHLEIDCHIVREKLQAGLFKLLPISSKDQVADFFTKSLLPQPF 152
>IMGA|Medtr5g089840.1 copia LTR rider, related
chr05_pseudomolecule_IMGAG_V3 34952559-34951978 H
EGN_Mt090430 20090702
Length = 154
Score = 66.6 bits (161), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 2/115 (1%)
Query: 80 RTLWDKLEELYASKSGNNQLFYLTKLMNFKYQEGTSVADHLSEMQVTIHQLSNMGIKFDD 139
+ LW+KLE LY +K +N+L + N + EGT ++DHLS + + +L ++ +K DD
Sbjct: 19 KELWEKLEGLYQAKGISNRLLLKEQFHNLRMDEGTKISDHLSTLNNIVSELESIEVKIDD 78
Query: 140 KILGLMVLASLPESWETLKISITNSTLHSGLSWEFVKNAVLNEEMRRKAQNLSSS 194
+ L ++ SLP S+ LK + LS+E V +++EEM K+ +SS
Sbjct: 79 EDKTLRIILSLPPSYVHLKPVLMYG--KESLSFEEVATKIISEEMTMKSDESTSS 131
>IMGA|Medtr8g015810.1 Ty1/copia-element polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 2876704-2878630 E
EGN_Mt090430 20090702
Length = 64
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 926 MDVKTAFLHGDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLYGLKQAPRQWYKK 978
MDV AFLHGDL+E++YM+ P GF VCKL+KS Y LK AP+ W+ K
Sbjct: 1 MDVHNAFLHGDLQEDVYMKLPRGF-HTSSSRLVCKLRKSQYVLKHAPQCWFAK 52
>IMGA|Medtr8g043330.1 F6N18.1, related chr08_pseudomolecule_IMGAG_V3
9341518-9340611 H EGN_Mt090430 20090702
Length = 155
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 69/176 (39%), Gaps = 49/176 (27%)
Query: 1103 STDGEKEVMEKIPYASAVGSLMYAMVCTRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRY 1162
S D E M Y +G L Y M RP IAH VG+V
Sbjct: 27 SEDTNDEPMNATIYRQIIGPLRY-MCNKRPYIAHGVGLVK-------------------- 65
Query: 1163 LRGTTKVCLCFGDEKPILVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVAL 1222
GD D +KST+ YL +SW S+ Q VAL
Sbjct: 66 ---------------------------GDQDDKKSTTCYLFMIGAAPISWSSKKQGIVAL 98
Query: 1223 STTEAEFIALTEACKELLWMKKFLNELGIHQ-ERYLIFCDSQSAIHLGKNSSFHSR 1277
S++EA+++A + A + LW++ L EL + +R + D++ AI L H +
Sbjct: 99 SSSEAKYVATSYAACQALWIEMLLEELNAFEVDRIKLLVDNKLAIDLADRPISHGK 154
>IMGA|Medtr3g097190.1 copia-type polyprotein, putative
chr03_pseudomolecule_IMGAG_V3 23165389-23165052 H
EGN_Mt090430 20090702
Length = 85
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 1180 LVGYTDADMAGDVDSRKSTSGYLITFAGGAVSWQSRLQKCVALSTTEAEFIALTEACKEL 1239
L GY+D+D GD R+STSG L F A+SW ++ Q ALS+ EAE+IA T A +
Sbjct: 13 LEGYSDSDRCGDRMDRRSTSGCLFKFNDAAISWCTKRQPITALSSCEAEYIAGTFAACQA 72
Query: 1240 LWMKKFLNEL 1249
+W+ + EL
Sbjct: 73 IWLDNVIKEL 82
>IMGA|Medtr3g101210.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr03_pseudomolecule_IMGAG_V3
24473881-24473486 H EGN_Mt090430 20090702
Length = 131
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 15/141 (10%)
Query: 1052 MKITRNRRTKKLWLSQEKYIEKVLQRFKMENSKAVSCPLANHFKLSSKQCPSTDGEKEVM 1111
M+I N +K L L Q Y ++L++F M + + + K+ E E +
Sbjct: 1 MEILIN--SKGLILHQTDYASEILKKFNMLDCNSTITHADANIIYEVKE------EDEGV 52
Query: 1112 EKIPYASAVGSLMYAMVC-TRPDIAHSVGVVSRFLSNPGKEHWAAVKWIFRYLRGTTKVC 1170
+ + +GSL Y +C +RP I++ VG+VSRF+SNP K ++ + K I RY+ T +
Sbjct: 53 DPTMFRRLIGSLRY--LCQSRPGISYLVGIVSRFMSNPLKTNFLSAKKILRYINSTLQYG 110
Query: 1171 LCF----GDEKPILVGYTDAD 1187
+ F E+ + GY+DAD
Sbjct: 111 ILFLVVQATEQLDMEGYSDAD 131
>IMGA|Medtr5g086750.1 Reverse transcriptase, RNA-dependent DNA
polymerase chr05_pseudomolecule_IMGAG_V3
33354025-33354392 H EGN_Mt090430 20090702
Length = 108
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 958 VCKLKKSLYGLKQAPRQWYKKFEFVMGKQGYKKTTSDQCVFVKKFSXXXXXXXXXXXXXX 1017
V L+KSLYGLKQA R WY K + + G++++ +D +F
Sbjct: 2 VYWLRKSLYGLKQASRNWYSKLSQALIEYGFQESHADHSLFTYS-RESIFMAVLIYVDDL 60
Query: 1018 XXXGQNSVRINSLKKQLSKSFAMKDLGPAKQILGMKITRN 1057
G ++ I + K+ L + F MKDLGP K LG+++ R
Sbjct: 61 VIAGNDTDTITNFKQYLKQCFHMKDLGPLKYFLGLELARG 100
>IMGA|Medtr3g097840.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 23539798-23540964 E
EGN_Mt090430 20090702
Length = 54
Score = 58.9 bits (141), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 617 TAVHLINRSPCVPLQYDTPERVWSGKDVSYDHLRVFGCKAFVHIPKDERS 666
TA+ LIN +P + L D RVW GK Y +LRV GC+AFVHIP +++
Sbjct: 3 TAIDLINLTPSILLDGDVRNRVWIGKYACYGYLRVLGCRAFVHIPSPQKT 52
>IMGA|Medtr3g044010.1 hypothetical protein
chr03_pseudomolecule_IMGAG_V3 12181817-12181315 H
EGN_Mt090430 20090702
Length = 133
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 58/123 (47%), Gaps = 29/123 (23%)
Query: 326 IADGKLLKVVGKGDICLETENGXRLILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGKW 385
+A+ + KVVG G I + T NG L +V VP M N IS+ LD + F
Sbjct: 1 MANSYVSKVVGMGSIKIRTHNGKFCTLNEVRPVPHMTKNQISLSLLDKKGFS-------- 52
Query: 386 KLTKGSMVIANGKKDPKLYVMHAKLSRDAFNVAEDDSAVELWHKRLGHMSEKGMTTLVKN 445
K +V+A+ + D H ++R LWH RLGHMSE GM L K+
Sbjct: 53 --FKSEVVVASSEID------HKDMTR-------------LWHMRLGHMSESGMQILAKD 91
Query: 446 NML 448
N+L
Sbjct: 92 NLL 94
>IMGA|Medtr7g135120.1 Copia protein, related
chr07_pseudomolecule_IMGAG_V3 32083970-32083668 H
EGN_Mt090430 20090702
Length = 100
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 43/65 (66%)
Query: 1261 DSQSAIHLGKNSSFHSRSKHIDVRYHWIRDVLEMKQLQLEKIHTDENGSDMLTKILPKDK 1320
D++SAI+L KNS FH + KH++ R+H++RD + +L +E T + +D+ TK L +D+
Sbjct: 17 DNKSAINLAKNSIFHGKRKHVETRFHFMRDQVNKNELIVEYCPTQDQLTDLFTKALKRDQ 76
Query: 1321 FEYCR 1325
F R
Sbjct: 77 FLKLR 81
>IMGA|Medtr8g012170.1 polyprotein, putative
chr08_pseudomolecule_IMGAG_V3 1857213-1857446 H
EGN_Mt090430 20090702
Length = 77
Score = 57.0 bits (136), Expect = 6e-08, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 943 MEQPEGFIKKGKEDYVCKLKKSLYGLKQAPRQWYKKFEFVMGKQGYKKTTSDQCVFV 999
M QP GF+ + VCKL+KSLYGLKQAP+ W++ + + ++ SD +F+
Sbjct: 1 MSQPYGFVHPQHPNQVCKLRKSLYGLKQAPQAWFQALQKFLLGYNFQNAKSDTSLFI 57
>IMGA|Medtr5g049200.1 retroelement pol polyprotein-like, related
chr05_pseudomolecule_IMGAG_V3 21011474-21012209 E
EGN_Mt090430 20090702
Length = 210
Score = 56.6 bits (135), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 76/174 (43%), Gaps = 41/174 (23%)
Query: 291 TQETSWVIDSGATLHATSXRE----------------NFSSYTPDNLGMVKIADGKLLKV 334
T+ SW++DSGA+ H T + N + T G VK+ DG
Sbjct: 31 TKLESWILDSGASNHMTGTLQYMHDVKEVIGCPVGLPNCRTTTCTKEGTVKLTDG----- 85
Query: 335 VGKGDICLETENGXRLILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGKWKLTK---GS 391
L L++V++VP ++ NLIS+ +L E C+ NG + +
Sbjct: 86 ---------------LRLENVLYVPKLNCNLISISQLLDELNCNVQFNGNFCAIQDRTSK 130
Query: 392 MVIANGKKDPKLYVMHAKLSRDAFNVAEDDSAVELWHKRLGHMSEKGMTTLVKN 445
M+I G++ LY A V E + +E+WHKRLGH S K T LV N
Sbjct: 131 MLIGAGEQRDGLYFFREVPKVKACKV-EGTNQLEVWHKRLGHPSWK-TTQLVSN 182
>IMGA|Medtr4g110620.1 polyprotein-like, related
chr04_pseudomolecule_IMGAG_V3 25158785-25159321 H
EGN_Mt090430 20090702
Length = 178
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 5/146 (3%)
Query: 68 NVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQEGTSVADHLSEMQVTI 127
N+ ++ N A+ KLE LY +K +NQLF K N EGT + +HL + I
Sbjct: 24 NLPANVQNLRSAKEFCKKLEGLYQAKKISNQLFPKEKFHNLHMDEGTKIFNHLCTLNDII 83
Query: 128 HQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTLHSGLSWEFV--KNAVLNEEMR 185
+L ++ +K D+ L ++ SLP + LK+ + LS+E V K +++EE R
Sbjct: 84 FELESIKVKIYDEDKALSLILSLPPFYVHLKLVLMYG--KESLSFEEVATKIKIISEERR 141
Query: 186 RKAQNLSSSQSDILLADAKRNNHSRG 211
K+ S+S S +LL + N G
Sbjct: 142 MKSDE-STSSSLMLLTKSGANGKRIG 166
>IMGA|Medtr3g169320.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 44131380-44131084 H
EGN_Mt090430 20090702
Length = 98
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 48/89 (53%), Gaps = 2/89 (2%)
Query: 522 KSKDQVLDVFKQFLNLVERQTGKKLKCIRTDNGGEYTGPFDAFCKEHGIRHQTTPPKTPQ 581
K+K +V + F+ +E Q K+K +RTDNG E+ P F GI HQT+ +TPQ
Sbjct: 4 KTKSEVSKSVQNFILNIENQFNCKVKTVRTDNGPEFLMP--DFYSSKGIEHQTSCVETPQ 61
Query: 582 LNGLAERMNRTLMERVRCLLSHAKLSKRF 610
NG ER ++ ++ R +L +K F
Sbjct: 62 QNGRVERKHQHILNVARAMLFQSKFMVLF 90
>IMGA|Medtr6g036540.1 Zinc finger, CCHC-type
chr06_pseudomolecule_IMGAG_V3 8117470-8116658 H
EGN_Mt090430 20090702
Length = 270
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 107/272 (39%), Gaps = 47/272 (17%)
Query: 9 ISLNGANYHIWRNKMRDLLMVTKMHLPVFGSSKP-----ADKTDEEWAFEHEQVCGYIRQ 63
I+LNG+NY+ W M L ++ V G K A+K EEW ++ Q+ + R+
Sbjct: 12 ITLNGSNYNQWPEAMCGFLKGRRLWRYVTGDKKCPTISLAEKL-EEWDSKNHQIITWCRK 70
Query: 64 FVDDNVYNHICNETHARTLWDKLEELYASKSGNNQLFYLTKLMNFKYQEGTSVADHLSEM 123
+++ +A+ +WD L++ Y ++Q L L N K Q G V + L++M
Sbjct: 71 TSTPSIHLQFGRFENAKEVWDYLKQRYTISDLSHQYQLLKDLSNLKQQSGQPVYEFLAQM 130
Query: 124 QVTIHQLSNMGIKFDDKILGLMVLASLPESWETLKISITNSTLHSGLSWEFVKNAVLNEE 183
++ +QL++ L LP TL + L + +EE
Sbjct: 131 EIIWNQLASCE----------PFLNPLP-------------TLENALP------CLKSEE 161
Query: 184 MRRKAQNLSSSQSDILLADAKRNNHSRGRSQSRSSNTRDKSRGRSNKFANIVCHHCGKKG 243
R L Q ++ A K+ Q + D N+ CH+C KKG
Sbjct: 162 TRL---GLLRQQDNLAFAVTKKIPKFCRVCQMTGHSFPD--------CPNVECHNCKKKG 210
Query: 244 HI-KRYCRKFKSDQEKIKGKAKKEESSDDEAN 274
HI CR K+ I+ + D N
Sbjct: 211 HIASNCCRYCKTPGHLIQNCPTRPPQHDQNKN 242
>IMGA|Medtr4g104320.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 22711151-22711574 H
EGN_Mt090430 20090702
Length = 99
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 34/49 (69%)
Query: 925 QMDVKTAFLHGDLEEEIYMEQPEGFIKKGKEDYVCKLKKSLYGLKQAPR 973
D+K FL+G LEE ++++QP G K KE+ V KL K LYGLKQAPR
Sbjct: 50 HFDMKLYFLNGSLEETMFVKQPSGLEIKCKEENVYKLHKDLYGLKQAPR 98
>IMGA|Medtr4g025100.1 Integrase, catalytic region; Zinc finger,
CCHC-type; Retrotransposon gag protein, putative
chr04_pseudomolecule_IMGAG_V3 5913545-5913860 H
EGN_Mt090430 20090702
Length = 84
Score = 53.9 bits (128), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 1231 ALTEACKELLWMKKFLNELGI-HQERYLIFCDSQSAIHLGKNSSFHSRSKHIDVRYHWIR 1289
AL +A E W+ FL++ I H +I+CD+ S++H+ N FH R+KHI++ H +R
Sbjct: 3 ALAQATSEGKWILYFLDDFPIPHSSPIIIYCDNNSSMHIVANPVFHERTKHIEIDCHVVR 62
Query: 1290 DVLE 1293
D ++
Sbjct: 63 DKIK 66
>IMGA|Medtr8g096240.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 21119820-21118370 E
EGN_Mt090430 20090702
Length = 93
Score = 53.5 bits (127), Expect = 6e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 923 IEQMDVKTAFLHGDLEEEIYMEQPEGFIKKGKE-DYVCKLKKSLYGLKQAPRQWYKKFEF 981
+ Q+D+K AF GD+ E++Y+E P FI +G D+V +L K+ Y LKQ+ R W K
Sbjct: 29 LHQLDIKHAFQFGDVIEKVYIEPPPRFIAQGDLCDFVYRLYKASYNLKQSLRAWSDKVSA 88
Query: 982 VMGK 985
V+ K
Sbjct: 89 VLQK 92
>IMGA|Medtr1g102740.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21153367-21155226 E
EGN_Mt090430 20090702
Length = 234
Score = 53.5 bits (127), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%)
Query: 296 WVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKDV 355
WV+DSG T H+T R F IA+G + + G G + +E+ +G +LIL +V
Sbjct: 13 WVVDSGCTTHSTYDRNLFKELKKTTNTKATIANGAYIPIEGIGTVEIESRSGVKLILNNV 72
Query: 356 VHVPDMHSNLISVGRLDAENFCSTFRNGK 384
++P+ +L+SV L E + F+ K
Sbjct: 73 NYIPENCYSLLSVAGLLEEGYQVLFKRNK 101
>IMGA|Medtr7g116810.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 27118605-27118065 H
EGN_Mt090430 20090702
Length = 141
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 650 RVFGCKAFVHIPKDERSKLDVKTRQCVFIGYGQDQFGYRFFDPLQKK 696
++FGC +FV+I D RSKLD + +CVFIGY Q GY + P K
Sbjct: 10 KIFGCTSFVYIQSDGRSKLDPRALKCVFIGYSSTQKGYICYHPPSHK 56
>IMGA|Medtr1g102780.1 gag-pol polyprotein, related
chr01_pseudomolecule_IMGAG_V3 21184395-21181931 E
EGN_Mt090430 20090702
Length = 311
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 48/94 (51%)
Query: 291 TQETSWVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRL 350
T WV++SG T H+T R F IA+G + + G G + +E+ +G +L
Sbjct: 31 TPSNFWVVESGCTTHSTYDRNLFKELKKTTNTKATIANGAYIPIEGIGTVEIESRSGVKL 90
Query: 351 ILKDVVHVPDMHSNLISVGRLDAENFCSTFRNGK 384
IL +V ++P+ +L+SV L E + F+ K
Sbjct: 91 ILNNVNYIPENCYSLLSVAGLLEEGYQVLFKRNK 124
>IMGA|Medtr5g046390.1 gag-pol polyprotein, related
chr05_pseudomolecule_IMGAG_V3 19508075-19507539 H
EGN_Mt090430 20090702
Length = 178
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 62/117 (52%), Gaps = 9/117 (7%)
Query: 296 WVIDSGATLHATSXRENFSSYTPDNLGMVKIADGKLLKVVGKGDICLETENGXRLILKDV 355
W+IDSGAT + T RE F+ ++++A+G + G G I + +G +L+L +V
Sbjct: 12 WLIDSGATNNLTCDREVFTELDKSYSSVIRVANGAEITSEGIGTIVFKNHSGSKLVL-NV 70
Query: 356 VHVPDMHSNLISVGRLDAENFCSTFRNGKWKLTKGSMVIANGKKDPKLYVMHAKLSR 412
++VP + NL+SV +L +NG L + + N + + +++ + K +R
Sbjct: 71 LYVPQISENLLSVPQL--------LKNGYKVLFEHESCMINDQNNEEVFKIQMKKNR 119