Jatropha Genome Database
- JcCA0043431.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0043431.10 + phase: 0
(265 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g137480.1 Ribose 5-phosphate isomerase chr01_pseudomo... 398 e-111
IMGA|Medtr7g140770.1 Ribose 5-phosphate isomerase chr07_pseudomo... 310 4e-85
IMGA|Medtr1g074140.1 Ribose 5-phosphate isomerase; Homeodomain-l... 109 1e-24
IMGA|Medtr2g036830.1 Ribose 5-phosphate isomerase chr02_pseudomo... 105 2e-23
IMGA|Medtr2g036830.2 Ribose 5-phosphate isomerase chr02_pseudomo... 70 2e-12
>IMGA|Medtr1g137480.1 Ribose 5-phosphate isomerase
chr01_pseudomolecule_IMGAG_V3 30487780-30484981 E
EGN_Mt090430 20090702
Length = 268
Score = 398 bits (1022), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/273 (73%), Positives = 230/273 (84%), Gaps = 15/273 (5%)
Query: 1 MAIPYPHL------SMETGLSPLSPYPVILT----QDELKKIAAYKAVEHVESGMVIGLG 50
MAIP PH +ME GL S ++ QD+LKKIAAYKAVE+VESGMV+GLG
Sbjct: 1 MAIPCPHFISSAKAAMEAGLLIPSSPSSSVSVILSQDDLKKIAAYKAVEYVESGMVLGLG 60
Query: 51 TGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQALSVGIPLSDLDSYPIIDLAIDGA 110
TGSTAKHAV RIGEL+RQGKLKNIIGIPTS THEQA+S+GIPLSDLDS+P+IDLAIDGA
Sbjct: 61 TGSTAKHAVARIGELIRQGKLKNIIGIPTSTITHEQAVSLGIPLSDLDSHPVIDLAIDGA 120
Query: 111 DEVDPNLNLVKGRGGSLLREKMIEGACKKFIVIVDESKLVKYVGGSGLAMPVEIVPFCWK 170
DEVDP LNLVKGRGGSLLREKM+EGACKKF+ IVDESKLV Y+GGSGLAMPVE++ FCWK
Sbjct: 121 DEVDPYLNLVKGRGGSLLREKMVEGACKKFVCIVDESKLVNYLGGSGLAMPVEVIRFCWK 180
Query: 171 FTAKRLQELFGYAGCVAKLRTNGSNGKENGGEPFVTDNGNYIVDLYLKGNMGDLKAASDA 230
FTA RLQ LF +GCVAKLRT+G GEP+VTDNGNYIVDLY K ++GDL+ ASDA
Sbjct: 181 FTAGRLQNLFEESGCVAKLRTSGEK-----GEPYVTDNGNYIVDLYFKKSIGDLRVASDA 235
Query: 231 ILRLAGVVEHGMFINMATTVVVAGELGVTIKNK 263
IL +AGVVEHGMF++MATTV+VAGELG+T+K+K
Sbjct: 236 ILNIAGVVEHGMFLDMATTVIVAGELGLTVKSK 268
>IMGA|Medtr7g140770.1 Ribose 5-phosphate isomerase
chr07_pseudomolecule_IMGAG_V3 33954296-33953176 E
EGN_Mt090430 20090702
Length = 280
Score = 310 bits (794), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 158/257 (61%), Positives = 193/257 (75%), Gaps = 6/257 (2%)
Query: 7 HLSMETGLSPLSPYPVILTQDELKKIAAYKAVEHVESGMVIGLGTGSTAKHAVDRIGELL 66
L + T S + LTQD+LKK+AA KAVE+V+SGMV+GLGTGSTA V ++GELL
Sbjct: 30 SLKLRTKPLSFSVKAITLTQDDLKKLAADKAVEYVKSGMVLGLGTGSTAAFVVSKLGELL 89
Query: 67 RQGKLKNIIGIPTSKKTHEQALSVGIPLSDLDSYPIIDLAIDGADEVDPNLNLVKGRGGS 126
G+L NIIG+PTSK+T EQA S+GIPLS LD P +DLAIDGADEVDP LNLVKGRGG+
Sbjct: 90 NSGELTNIIGVPTSKRTEEQARSLGIPLSVLDDNPRLDLAIDGADEVDPFLNLVKGRGGA 149
Query: 127 LLREKMIEGACKKFIVIVDESKLVKYVGGSGLAMPVEIVPFCWKFTAKRLQELFGYAGCV 186
LLREKM+E A KF+V+VD++KLV +GGSGLAMPVE+V FCWK+ RLQELF G
Sbjct: 150 LLREKMVEAASDKFVVVVDDTKLVSGLGGSGLAMPVEVVQFCWKYNLIRLQELFKEEGVD 209
Query: 187 AKLRTNGSNGKENGGEPFVTDNGNYIVDLYLKGNMGDLKAASDAILRLAGVVEHGMFINM 246
AKLR + S G+P+VTDN NYIVDLY K + D AA I L GVVEHG+F+NM
Sbjct: 210 AKLRVDES------GKPYVTDNSNYIVDLYFKTPIRDANAAGAEISSLEGVVEHGLFLNM 263
Query: 247 ATTVVVAGELGVTIKNK 263
AT+V++AG+ GV +K+K
Sbjct: 264 ATSVIIAGKTGVEVKDK 280
>IMGA|Medtr1g074140.1 Ribose 5-phosphate isomerase;
Homeodomain-like; chr01_pseudomolecule_IMGAG_V3
14953614-14956280 E EGN_Mt090430 20090702
Length = 399
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 53/78 (67%), Positives = 66/78 (84%), Gaps = 5/78 (6%)
Query: 186 VAKLRTNGSNGKENGGEPFVTDNGNYIVDLYLKGNMGDLKAASDAILRLAGVVEHGMFIN 245
+ KLRT+G G EP+VTDNGNYIVDLY K ++GDL+ ASDAIL +AGVVEHGMF++
Sbjct: 327 ILKLRTSGEKG-----EPYVTDNGNYIVDLYFKKSIGDLRVASDAILNIAGVVEHGMFLD 381
Query: 246 MATTVVVAGELGVTIKNK 263
MATTV+VAGELG+T+K+K
Sbjct: 382 MATTVIVAGELGLTVKSK 399
>IMGA|Medtr2g036830.1 Ribose 5-phosphate isomerase
chr02_pseudomolecule_IMGAG_V3 9882668-9886939 E
EGN_Mt090430 20090702
Length = 250
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 118/236 (50%), Gaps = 7/236 (2%)
Query: 29 LKKIAAYKAVEHVESGMVIGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAL 88
L + A Y +V+SGMV+GLG+G + A+ +G LR G LK+++GIPTS + +A
Sbjct: 14 LLQAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRNGNLKDVVGIPTSVASASEAA 73
Query: 89 SVGIPLSDLDSYPIIDLAIDGADEVDP-NLNLVKGRGGSLLREKMIEGACKKFIVIVDES 147
GIPL ID+A D AD V+ + GR E +I+ +K + I++E+
Sbjct: 74 KAGIPLDTYQDSSQIDIAFDDADGVEEGTFVAIIGRRKLQSEESIIQ---EKAMFIIEEN 130
Query: 148 KLVKYVGGSGLAMPVEIVPFCWKFTAKRLQELFGYAGCVAKLRTNGSNGKENGGEPFVTD 207
+Y GG ++PV I W A+ + ++F V + G G G P VT
Sbjct: 131 ---QYKGGLEGSIPVLIQSLNWLAAAEEIDDMFLGDAEVWRRPAIGQAGPLGGDFPLVTG 187
Query: 208 NGNYIVDLYLKGNMGDLKAASDAILRLAGVVEHGMFINMATTVVVAGELGVTIKNK 263
G+ ++D+ + L + + + GVV+HG+ TVV+A G+ + +K
Sbjct: 188 EGHNVLDVIFTSPIPSLAEVAKILDNVDGVVDHGVISKTPCTVVIASPNGLNVLDK 243
>IMGA|Medtr2g036830.2 Ribose 5-phosphate isomerase
chr02_pseudomolecule_IMGAG_V3 9882668-9885129 E
EGN_Mt090430 20090702
Length = 127
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 29 LKKIAAYKAVEHVESGMVIGLGTGSTAKHAVDRIGELLRQGKLKNIIGIPTSKKTHEQAL 88
L + A Y +V+SGMV+GLG+G + A+ +G LR G LK+++GIPTS + +A
Sbjct: 14 LLQAAQYTVDTYVKSGMVVGLGSGHASGMAIQHLGRQLRNGNLKDVVGIPTSVASASEAA 73
Query: 89 SVGIPLSDLDSYPIIDLAIDGADEVD 114
GIPL ID+A D AD V+
Sbjct: 74 KAGIPLDTYQDSSQIDIAFDDADGVE 99