Jatropha Genome Database
- JcCA0043071.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0043071.10 + phase: 0 /partial
(258 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr5g020810.1 Glycoside hydrolase, catalytic core chr05_p... 321 3e-88
IMGA|AC235094_8.1 Glycoside hydrolase, family 5 AC235094.1 41278... 268 1e-72
IMGA|Medtr4g118250.1 Glycoside hydrolase, family 5 chr04_pseudom... 266 6e-72
IMGA|Medtr1g103540.1 Mannan endo-1,4-beta-mannosidase 4 precurso... 266 7e-72
IMGA|Medtr1g103510.1 Mannan endo-1,4-beta-mannosidase 4 precurso... 249 7e-67
IMGA|Medtr8g005200.1 Glycoside hydrolase, family 5 chr08_pseudom... 235 1e-62
IMGA|Medtr8g005480.1 Glycoside hydrolase, family 5 chr08_pseudom... 235 1e-62
IMGA|Medtr4g118240.1 Profilin/allergen chr04_pseudomolecule_IMGA... 234 2e-62
IMGA|Medtr4g107960.1 Glycoside hydrolase, family 5 chr04_pseudom... 209 1e-54
IMGA|Medtr1g103530.1 NADH/Ubiquinone/plastoquinone (complex I) c... 190 7e-49
IMGA|Medtr7g080430.1 Glycoside hydrolase, catalytic core chr07_p... 75 3e-14
>IMGA|Medtr5g020810.1 Glycoside hydrolase, catalytic core
chr05_pseudomolecule_IMGAG_V3 7872320-7875527 E
EGN_Mt090430 20090702
Length = 438
Score = 321 bits (822), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 156/260 (60%), Positives = 192/260 (73%), Gaps = 10/260 (3%)
Query: 1 TVLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLL 60
TVL R NS TG+ YKD+PTIMAWELMNEPRCTSDPSGRTIQ WI EMAS +KSID NHLL
Sbjct: 177 TVLNRYNSFTGIHYKDDPTIMAWELMNEPRCTSDPSGRTIQGWITEMASLVKSIDRNHLL 236
Query: 61 EAGLEGFYGPTSSSKQQYNPNF-QIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEGQE 119
EAGLEGFYG ++ + ++NP IGTDFIANN+IPGIDFATVH YPDQW+ +SN + Q
Sbjct: 237 EAGLEGFYGQSTPQRTKFNPTINNIGTDFIANNRIPGIDFATVHCYPDQWVQSSNEQDQL 296
Query: 120 SFLNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAY--NQRDQLFTTIYSAIYSSARXXX 177
SFLNNWL+ H DAQ L KP+L AEFGKS + + + NQRDQLF T+Y IY+SA+
Sbjct: 297 SFLNNWLSAHFLDAQYALKKPILVAEFGKSFKDSGFSSNQRDQLFNTVYYKIYASAKRGG 356
Query: 178 XXXXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKLNKIRKMYARLRNIEKWN 237
+FWQL+TEGM+SF DGY ++ ++ STA++I QS KL IRK+YA++ N +W
Sbjct: 357 PASGALFWQLLTEGMESFDDGYGILLGQSTSTANVIAQQSHKLYLIRKIYAKIANERRWK 416
Query: 238 RAREIRQAQWWAGKNSSKVG 257
RAR + G+ SS+ G
Sbjct: 417 RAR-------FNGRRSSRDG 429
>IMGA|AC235094_8.1 Glycoside hydrolase, family 5 AC235094.1
41278-38255 E EGN_Mt090430 20090702
Length = 429
Score = 268 bits (686), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 117/225 (52%), Positives = 167/225 (74%), Gaps = 5/225 (2%)
Query: 2 VLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLLE 61
VLTR N+ITG+AYKD+PTI AWELMNEPR SD SG++ Q W++EMA+Y+KSID NHLLE
Sbjct: 208 VLTRNNTITGLAYKDDPTIFAWELMNEPRSQSDSSGKSFQDWVSEMAAYVKSIDSNHLLE 267
Query: 62 AGLEGFYGPTSSSKQQYNPNFQIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEGQESF 121
GLEGFYG + K NP + +GTDFI+NNQ+P IDF T+H YP+ W+ +S+ Q +F
Sbjct: 268 VGLEGFYGESMPEK---NPGYGVGTDFISNNQVPEIDFTTIHLYPESWVSSSDEAAQNAF 324
Query: 122 LNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAYN--QRDQLFTTIYSAIYSSARXXXXX 179
++ W+ +HIQD+++IL+KP+L EFGKSS+ + YN +R+ F +++ +Y SA
Sbjct: 325 VDKWVQDHIQDSKDILNKPILITEFGKSSKYSGYNVEKRNSYFEKLFNFVYDSASNGGAC 384
Query: 180 XXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKLNKIR 224
+FWQ + +G+DSFRDGYEV+ ENPST ++I QS++++ ++
Sbjct: 385 AGGLFWQFIAQGLDSFRDGYEVILEENPSTVTVISQQSKRMSNLK 429
>IMGA|Medtr4g118250.1 Glycoside hydrolase, family 5
chr04_pseudomolecule_IMGAG_V3 27429650-27427419 E
EGN_Mt090430 20090702
Length = 411
Score = 266 bits (681), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 119/222 (53%), Positives = 157/222 (70%), Gaps = 2/222 (0%)
Query: 1 TVLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLL 60
TVLTR N+IT +AYKDEPTIMAWEL+NEPRC D SG+ I W+ EMA Y+KSID HLL
Sbjct: 179 TVLTRINTITKIAYKDEPTIMAWELINEPRCQVDYSGKIINEWVKEMAPYVKSIDKKHLL 238
Query: 61 EAGLEGFYGPTSSSKQQYNPNFQIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEGQES 120
E GLEGFYG + ++QYNP FQ+G+DF++NN + IDF T+H+YPD WL N Q
Sbjct: 239 EVGLEGFYGDSIPDRKQYNPGFQVGSDFVSNNLVKDIDFGTIHAYPDNWLAGQNDTMQME 298
Query: 121 FLNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAYN--QRDQLFTTIYSAIYSSARXXXX 178
F+ W+ +H+QD++ IL KP++F EFG S + Y+ RD T+YS+IYS A+
Sbjct: 299 FMQRWITSHLQDSRTILKKPLVFTEFGMSKNDSGYSIEARDSFMNTVYSSIYSLAQNGGT 358
Query: 179 XXXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKL 220
+ WQL+ EGMDS+ DGYE+V ++NPST+S+I QS K+
Sbjct: 359 FAGGLVWQLLDEGMDSYDDGYEIVLTQNPSTSSVISQQSSKM 400
>IMGA|Medtr1g103540.1 Mannan endo-1,4-beta-mannosidase 4 precursor,
putative chr01_pseudomolecule_IMGAG_V3 21602207-21604359
H EGN_Mt090430 20090702
Length = 402
Score = 266 bits (680), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 125/227 (55%), Positives = 167/227 (73%), Gaps = 4/227 (1%)
Query: 2 VLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLLE 61
VLTR+N+I+GV YKD+PTI AWELMNEPR +D SG++IQ W++EMA Y+KSID NH+LE
Sbjct: 175 VLTRKNTISGVLYKDDPTIFAWELMNEPRYVND-SGKSIQNWVSEMAPYVKSIDSNHMLE 233
Query: 62 AGLEGFYGPTSSSKQQYNPNF-QIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEGQES 120
GLEGFY T K+Q+NPN Q+GTDFI+NNQIP IDFAT+H YPDQW+ S Q
Sbjct: 234 IGLEGFYSETMLQKKQFNPNTAQVGTDFISNNQIPQIDFATIHIYPDQWIQGSEETTQNV 293
Query: 121 FLNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAY--NQRDQLFTTIYSAIYSSARXXXX 178
F++ W+ HIQD+ +L KP++ AEFGKSS++A Y ++RD F +Y+AI +SA
Sbjct: 294 FVDKWIGAHIQDSNTVLGKPIIIAEFGKSSKSAGYSIDKRDSYFKKVYNAISTSAISGGS 353
Query: 179 XXXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKLNKIRK 225
+FWQL+++GMD+ DGYEV+F + ST+ +I QS K++ IRK
Sbjct: 354 CAGGIFWQLLSQGMDNMGDGYEVIFENSLSTSQVIKQQSLKMSSIRK 400
>IMGA|Medtr1g103510.1 Mannan endo-1,4-beta-mannosidase 4 precursor,
putative chr01_pseudomolecule_IMGAG_V3 21573797-21581692
E EGN_Mt090430 20090702
Length = 471
Score = 249 bits (637), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 120/225 (53%), Positives = 157/225 (69%), Gaps = 3/225 (1%)
Query: 2 VLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLLE 61
VLTR N+I GV YKD+PTI AWEL+NEPR +D SG +IQ W+ EMA+++KSID HLLE
Sbjct: 248 VLTRNNTINGVLYKDDPTIFAWELINEPRYVND-SGNSIQNWVREMATFVKSIDNKHLLE 306
Query: 62 AGLEGFYGPTSSSKQQYNPNFQIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEGQESF 121
GLEGFY T+ KQ + ++GTDFI+NNQIP IDFAT+H YPD+WL SN + F
Sbjct: 307 IGLEGFYAETTPQKQFNLNSVKVGTDFISNNQIPQIDFATIHVYPDEWLQGSNETAKSHF 366
Query: 122 LNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAYN--QRDQLFTTIYSAIYSSARXXXXX 179
++ W+ HIQD+ IL KP++ AEFGKSS++ Y+ RD F +Y+AI SA
Sbjct: 367 VDEWIEAHIQDSNTILKKPLVIAEFGKSSKSHGYSIAIRDNYFKKVYNAISRSAINGGSC 426
Query: 180 XXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKLNKIR 224
+FWQL+++GMD++ DGYEVVF PST II QS K++ I+
Sbjct: 427 AGGIFWQLLSQGMDTYGDGYEVVFENCPSTGEIIKQQSMKMSHIK 471
>IMGA|Medtr8g005200.1 Glycoside hydrolase, family 5
chr08_pseudomolecule_IMGAG_V3 123372-120703 E
EGN_Mt090430 20090702
Length = 483
Score = 235 bits (600), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 146/225 (64%), Gaps = 5/225 (2%)
Query: 1 TVLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLL 60
TVL R N++T + YK++PTI AWELMNEPRCTSD G T+Q WI EMA Y+KSID HLL
Sbjct: 229 TVLNRVNTLTNITYKEDPTIFAWELMNEPRCTSDSLGDTLQEWIKEMAFYVKSIDPKHLL 288
Query: 61 EAGLEGFYGPTSSSKQQYNPNF---QIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEG 117
E GLEGFYGP++ + Q+NPN Q+GTDFI N+Q+ G+DFA+ H YPD W+ S +
Sbjct: 289 EIGLEGFYGPSTPQRFQFNPNSYAQQVGTDFIRNHQVLGVDFASAHIYPDSWISQSVADS 348
Query: 118 QESFLNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAYNQ--RDQLFTTIYSAIYSSARX 175
F+ +W+ HI DA+ L PV+F EFG S++ YN RD L T+Y I +S +
Sbjct: 349 HIPFVKSWMEAHIDDAEKYLGMPVVFGEFGVSAKDPGYNSTYRDTLINTVYKTILNSTKK 408
Query: 176 XXXXXXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKL 220
+ WQ +G D DGY +V S+ PST+S+I QS +L
Sbjct: 409 GGSGAGSLLWQFFPDGTDYMDDGYAIVLSKAPSTSSMISLQSTRL 453
>IMGA|Medtr8g005480.1 Glycoside hydrolase, family 5
chr08_pseudomolecule_IMGAG_V3 291382-294051 E
EGN_Mt090430 20090702
Length = 463
Score = 235 bits (600), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 111/225 (49%), Positives = 146/225 (64%), Gaps = 5/225 (2%)
Query: 1 TVLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLL 60
TVL R N++T + YK++PTI AWELMNEPRCTSD G T+Q WI EMA Y+KSID HLL
Sbjct: 209 TVLNRVNTLTNITYKEDPTIFAWELMNEPRCTSDSLGDTLQEWIKEMAFYVKSIDPKHLL 268
Query: 61 EAGLEGFYGPTSSSKQQYNPNF---QIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEG 117
E GLEGFYGP++ + Q+NPN Q+GTDFI N+Q+ G+DFA+ H YPD W+ S +
Sbjct: 269 EIGLEGFYGPSTPQRFQFNPNSYAQQVGTDFIRNHQVLGVDFASAHIYPDSWISQSVADS 328
Query: 118 QESFLNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAYNQ--RDQLFTTIYSAIYSSARX 175
F+ +W+ HI DA+ L PV+F EFG S++ YN RD L T+Y I +S +
Sbjct: 329 HIPFVKSWMEAHIDDAEKYLGMPVVFGEFGVSAKDPGYNSTYRDTLINTVYKTILNSTKK 388
Query: 176 XXXXXXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKL 220
+ WQ +G D DGY +V S+ PST+S+I QS +L
Sbjct: 389 GGSGAGSLLWQFFPDGTDYMDDGYAIVLSKAPSTSSMISLQSTRL 433
>IMGA|Medtr4g118240.1 Profilin/allergen
chr04_pseudomolecule_IMGAG_V3 27419501-27413227 E
EGN_Mt090430 20090702
Length = 213
Score = 234 bits (598), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 139/202 (68%), Gaps = 2/202 (0%)
Query: 21 MAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLLEAGLEGFYGPTSSSKQQYNP 80
MAWEL+NEPRC D SG+ I W+ EMA Y+KSID HLLE GLEGFYG + ++QYNP
Sbjct: 1 MAWELINEPRCQVDYSGKIINEWVKEMAPYVKSIDKKHLLEVGLEGFYGDSIPDRKQYNP 60
Query: 81 NFQIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEGQESFLNNWLNNHIQDAQNILHKP 140
FQ+G+DF++NN + IDF T+H+YPD WL N Q F+ W+ +H+QD++ IL KP
Sbjct: 61 GFQVGSDFVSNNLVKDIDFGTIHAYPDNWLAGQNDTMQMEFMQRWITSHLQDSRTILKKP 120
Query: 141 VLFAEFGKSSRTAAYN--QRDQLFTTIYSAIYSSARXXXXXXXXMFWQLMTEGMDSFRDG 198
++F EFG S + Y+ RD T+YS+IYS A+ + WQL+ EGMDS+ DG
Sbjct: 121 LVFTEFGMSKNDSGYSIEARDSFMNTVYSSIYSLAQNGGTFAGGLVWQLLDEGMDSYDDG 180
Query: 199 YEVVFSENPSTASIIVDQSQKL 220
YE+V ++NPST+S+I QS K+
Sbjct: 181 YEIVLTQNPSTSSVISQQSSKM 202
>IMGA|Medtr4g107960.1 Glycoside hydrolase, family 5
chr04_pseudomolecule_IMGAG_V3 23720889-23717166 E
EGN_Mt090430 20090702
Length = 427
Score = 209 bits (531), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 96/231 (41%), Positives = 142/231 (61%), Gaps = 6/231 (2%)
Query: 1 TVLTRRNSITGVAYKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNHLL 60
T+LTR+N+ITG+ Y+ +P I WEL+NEPRC +DPSG T+Q WI EM++++KSID HL+
Sbjct: 184 TILTRKNTITGIEYRHDPIIFGWELINEPRCITDPSGDTLQDWIEEMSTFVKSIDKKHLV 243
Query: 61 EAGLEGFYGPTSSSKQQYNP----NFQIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTE 116
GLEGFYGP + NP ++G+DFI N+Q IDF +VH YPD W + E
Sbjct: 244 TIGLEGFYGPNDPKRLTVNPPEGWASRLGSDFIRNSQTSNIDFTSVHIYPDHWFHKQDFE 303
Query: 117 GQESFLNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAY--NQRDQLFTTIYSAIYSSAR 174
FL+ W+ +HI+D N+L+KPVLF+E+G S + + R++++ I + SA+
Sbjct: 304 EYMKFLSKWMLSHIEDGDNVLNKPVLFSEYGLSDSIENFSLSNREKMYKKILDISHKSAK 363
Query: 175 XXXXXXXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKLNKIRK 225
+ WQ + GM F D + +V E PS S+ ++ S +L K+ K
Sbjct: 364 KNQSGAGALVWQFLVSGMSEFIDDFGMVPWEKPSMYSLFIEHSCRLTKVNK 414
>IMGA|Medtr1g103530.1 NADH/Ubiquinone/plastoquinone (complex I)
chr01_pseudomolecule_IMGAG_V3 21596629-21600691 H
EGN_Mt090430 20090702
Length = 505
Score = 190 bits (482), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 130/227 (57%), Gaps = 38/227 (16%)
Query: 1 TVLTRRNSITGVA--YKDEPTIMAWELMNEPRCTSDPSGRTIQAWIAEMASYLKSIDGNH 58
VLTR+N+I+GV YKD+PTI AWELMNEPR G++IQ WI+EM Y+KS+DGNH
Sbjct: 176 VVLTRKNTISGVLVLYKDDPTIFAWELMNEPRV--HDFGKSIQNWISEMVPYVKSLDGNH 233
Query: 59 LLEAGLEGFYGPTSSSKQQYNPNFQIGTDFIANNQIPGIDFATVHSYPDQWLPNSNTEGQ 118
LLE GLEGFYG T K+Q L +S+ +
Sbjct: 234 LLEIGLEGFYGETMPEKKQ--------------------------------LRHSDEAAK 261
Query: 119 ESFLNNWLNNHIQDAQNILHKPVLFAEFGKSSRTAAY--NQRDQLFTTIYSAIYSSARXX 176
F + W+ HIQDA IL KP++ EFG SR Y +QRD F IYSAI +SA
Sbjct: 262 GVFFDKWIGAHIQDANTILVKPIIVQEFGTFSRLPGYRTDQRDSYFNKIYSAISTSAISG 321
Query: 177 XXXXXXMFWQLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKLNKI 223
+FWQLM++GMD + DGYEVV NPSTA +I QS K++ I
Sbjct: 322 GSCAGGIFWQLMSQGMDGYGDGYEVVLKNNPSTAEVIRQQSLKMSNI 368
>IMGA|Medtr7g080430.1 Glycoside hydrolase, catalytic core
chr07_pseudomolecule_IMGAG_V3 17002675-17003294 E
EGN_Mt090430 20090702
Length = 113
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 56/95 (58%), Gaps = 12/95 (12%)
Query: 126 LNNHIQDAQNILHKPVLFAEFGKSSRTAAYNQRDQLFTTIYSAIYSSARXXXXXXXXMFW 185
++ HI+D + L PV+F+EF D L +T+YS+I +S + + W
Sbjct: 1 MDAHIEDTEKYLGMPVVFSEF------------DTLISTVYSSILNSTKKGGSGAGSLLW 48
Query: 186 QLMTEGMDSFRDGYEVVFSENPSTASIIVDQSQKL 220
Q+ EGMD+ DGY +VFS++PST+SI+ QS +L
Sbjct: 49 QVFFEGMDNMDDGYAIVFSKSPSTSSIVTLQSTRL 83