Jatropha Genome Database

JcCA0032471.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0032471.10 - phase: 1 /partial
         (397 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr3g147720.1 bZIP transcription factor, bZIP_1 chr03_pse...   328   3e-90
IMGA|Medtr4g129920.1 bZIP transcription factor, bZIP_1 chr04_pse...   241   3e-64
IMGA|Medtr8g047750.1 bZIP transcription factor, bZIP_1 chr08_pse...   119   3e-27
IMGA|Medtr3g016390.1 bZIP transcription factor, bZIP_1 chr03_pse...   115   3e-26
IMGA|Medtr7g127260.1 Basic leucine zipper chr07_pseudomolecule_I...   108   5e-24
IMGA|Medtr6g017880.1 cAMP response element binding, putative chr...   107   1e-23
IMGA|Medtr7g104860.1 bZIP transcription factor, bZIP_1 chr07_pse...   105   5e-23
IMGA|Medtr2g107890.1 hypothetical protein chr02_pseudomolecule_I...    92   5e-19
IMGA|Medtr5g095290.1 bZIP transcription factor, bZIP_1 chr05_pse...    89   3e-18
IMGA|Medtr2g107870.1 bZIP transcription factor, bZIP_1 chr02_pse...    75   6e-14

>IMGA|Medtr3g147720.1 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 38313295-38308510 E
           EGN_Mt090430 20090702
          Length = 431

 Score =  328 bits (841), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 205/385 (53%), Positives = 231/385 (60%), Gaps = 44/385 (11%)

Query: 18  LNFKNFTNDP-VSDTGGGSRLPGNFPLARQTSIYSLTFDELQSTMGGIGKDFGSMNMDEL 76
           +NFK F NDP  S  GGG    GNFPL RQ S+YSLT DE  ++MGG GKDFGSMNMDEL
Sbjct: 1   MNFKGFGNDPGASGNGGGRIAAGNFPLTRQPSVYSLTVDEFMNSMGGSGKDFGSMNMDEL 60

Query: 77  LKNIWTAEETQNMVAASTGPQESLQRQGSLTLPRTLSQKTVDEVWKDISKEYVNXXXXXX 136
           LKNIW+AEE Q M          LQRQGSLTLPRTLSQKTVDEVWKDISK+Y        
Sbjct: 61  LKNIWSAEEVQTM-GGEEAISNHLQRQGSLTLPRTLSQKTVDEVWKDISKDY----GGPN 115

Query: 137 XVANVPQRQQTLGEMTLEEFLVRAGVVREDAQIAGKINANGGFYGDLARSGNNSGFGLGF 196
             A + QRQ TLGEMTLEEFLVRAGVVREDA+       N G + DL   GNN   GL F
Sbjct: 116 LAAPMTQRQPTLGEMTLEEFLVRAGVVREDAK------PNDGVFLDLGNVGNNGNLGLAF 169

Query: 197 ---QQNRVLA-------LNSNNTNQISMHS-SNLPLNVNGVRSN---------------- 229
              Q N+V         +N N+   + + S +NLPLNVNG+RS                 
Sbjct: 170 QAQQMNKVAGFMGNGNRINGNDDPLVGLQSPTNLPLNVNGIRSTNQQQQMQNSQSQAQQQ 229

Query: 230 XXXXXXXXXXXXXXXXXIFPKQPTLGYVTQMPLQTSPGIRSGIMGIG-----DXXXXXXX 284
                            IFPKQP L Y TQMPL  + G+R GI+G+      +       
Sbjct: 230 HQNQQLQQLQQQQQQQQIFPKQPGLNYATQMPLSNNQGMRGGIVGLSPDHGMNGNLVQGG 289

Query: 285 XXXXXXXXXXXXXXXTGSPANQLSSDGITKSNGDTSSVSPVPYVFNGGLRGRRATGAVEK 344
                            SPANQ+SSD + KSNGDTSSVSPVPYVFNGG+RGR+  GAVEK
Sbjct: 290 GIGMVGLAPGAVQIGAVSPANQISSDKMGKSNGDTSSVSPVPYVFNGGMRGRKGNGAVEK 349

Query: 345 VVERRQRRMIKNRESAARSRARKQV 369
           V+ERRQRRMIKNRESAARSRARKQ 
Sbjct: 350 VIERRQRRMIKNRESAARSRARKQA 374


>IMGA|Medtr4g129920.1 bZIP transcription factor, bZIP_1
           chr04_pseudomolecule_IMGAG_V3 31039879-31043409 E
           EGN_Mt090430 20090702
          Length = 376

 Score =  241 bits (616), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 162/359 (45%), Positives = 204/359 (56%), Gaps = 71/359 (19%)

Query: 36  RLPGNFPLARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAEETQNMVAAS-- 93
           + PG+  LA Q+SIYSLTFDELQST+GG+GKDFGSMNMDELLKNIW  EETQ + + +  
Sbjct: 11  KTPGSVNLASQSSIYSLTFDELQSTIGGVGKDFGSMNMDELLKNIWNVEETQALTSLTGG 70

Query: 94  ---TGPQE----SLQRQGSLTLPRTLSQKTVDEVWKDISKEYVNXXXXXXXVANVPQRQQ 146
               GP      +LQ+QGSLTLPRTLSQ+ VDEVW+D+ K+           +++PQRQ 
Sbjct: 71  GVGEGPNNPNGGTLQKQGSLTLPRTLSQRKVDEVWRDLMKD---------SGSSMPQRQP 121

Query: 147 TLGEMTLEEFLVRAGVVRED----AQIAGKINANGGFYGDLARSGNNSGFGLGFQQ-NRV 201
           TLGE+TLEEFLVRAGVV+ED    AQ   + N N  ++ D +RS NN+   LGFQQ N  
Sbjct: 122 TLGEVTLEEFLVRAGVVKEDTPNHAQQIERPN-NNEWFSDFSRSNNNTNL-LGFQQPNGN 179

Query: 202 LALNSNNTNQISMHSSNLPLNVNGVRSNXXXXXXXXXXXXXXXXXIFPKQPTLGYVTQMP 261
               S+N N +  H   +PL  + +  N                 +FPK  T+ + + M 
Sbjct: 180 NGDMSDNNNLVPKH---VPLPPSSINLN----------HSQRPPPLFPKPTTVAFASPMH 226

Query: 262 L-----------QTSPGIRSGIMGIGDXXXXXXXXXXXXXXXXXXXXXXTGSPANQLSSD 310
           L              PG+  G +G+                          SP +++S D
Sbjct: 227 LLNNAQLGNNGRSVGPGV--GTLGLS----------------ASNITAPVASPGSKMSPD 268

Query: 311 GITKSNGDTSSVSPVPYVFNGGLRGRRATGAVEKVVERRQRRMIKNRESAARSRARKQV 369
            ITK N D S +SPVPY  N   RGR+    VEK VERRQ+RMIKNRESAARSRARKQ 
Sbjct: 269 LITKRNLDPSLLSPVPYAIN---RGRKCV-PVEKGVERRQKRMIKNRESAARSRARKQA 323


>IMGA|Medtr8g047750.1 bZIP transcription factor, bZIP_1
           chr08_pseudomolecule_IMGAG_V3 10819105-10821284 E
           EGN_Mt090430 20090702
          Length = 308

 Score =  119 bits (298), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 63/127 (49%), Positives = 82/127 (64%), Gaps = 10/127 (7%)

Query: 43  LARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAEETQNMVAASTGPQES--- 99
           L RQ S+YSLT DE+Q+ +G +GK   SMN+DELLKN+WT E  Q+    + G  +S   
Sbjct: 19  LVRQNSVYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEVNQSTNTDNEGTAQSSEA 78

Query: 100 -LQRQGSLTLPRTLSQKTVDEVWKDISKEYVNXXXXXXXVANVPQRQQTLGEMTLEEFLV 158
            LQRQ SL L    S+KTVDEVW+DI ++  +            +RQ TLGEMTLE+FLV
Sbjct: 79  CLQRQASLALKAAFSKKTVDEVWRDIQQKKDSEEKKSR------ERQTTLGEMTLEDFLV 132

Query: 159 RAGVVRE 165
           +AG+V E
Sbjct: 133 KAGIVAE 139



 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/28 (89%), Positives = 26/28 (92%)

Query: 342 VEKVVERRQRRMIKNRESAARSRARKQV 369
           VEK VERRQ+RMIKNRESAARSRARKQ 
Sbjct: 232 VEKTVERRQKRMIKNRESAARSRARKQA 259


>IMGA|Medtr3g016390.1 bZIP transcription factor, bZIP_1
           chr03_pseudomolecule_IMGAG_V3 3166755-3168592 E
           EGN_Mt090430 20090702
          Length = 300

 Score =  115 bits (289), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 64/140 (45%), Positives = 88/140 (62%), Gaps = 12/140 (8%)

Query: 42  PLARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAEETQNMVAASTGPQES-- 99
           PLARQ S+Y+LT DE+Q+ +G +GK   SMN+DELLKN+WT E  Q++   +    ++  
Sbjct: 19  PLARQNSMYNLTLDEVQNHLGDLGKPLSSMNLDELLKNVWTVEANQSIRMENENTAQAGE 78

Query: 100 --LQRQGSLTLPRTLSQKTVDEVWKDISKEYVNXXXXXXXVANVPQRQQTLGEMTLEEFL 157
              QRQ +L+L   LS+KTVDEVW+DI +   +       +      Q TLGEMTLE+FL
Sbjct: 79  VVFQRQPNLSLTGPLSKKTVDEVWRDIQQSNDHEEVKSQEI------QSTLGEMTLEDFL 132

Query: 158 VRAGVVREDAQIAGKINANG 177
           V+AGVV   A  + + N NG
Sbjct: 133 VKAGVV--SAASSNRKNTNG 150



 Score = 55.8 bits (133), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 3/63 (4%)

Query: 309 SDGITKSNGDTSSVSPVPYVFNGGLRGRRATGA---VEKVVERRQRRMIKNRESAARSRA 365
           SD +  ++G  +  SPV    +   +  R  G    +E+ VER+Q+RMIKNRESAARSRA
Sbjct: 210 SDSVPYTDGQVALASPVIGNLSDTQKSARKRGPEDMIERTVERKQKRMIKNRESAARSRA 269

Query: 366 RKQ 368
           RKQ
Sbjct: 270 RKQ 272


>IMGA|Medtr7g127260.1 Basic leucine zipper
           chr07_pseudomolecule_IMGAG_V3 29797969-29803044 E
           EGN_Mt090430 20090702
          Length = 439

 Score =  108 bits (270), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 63/134 (47%), Positives = 77/134 (57%), Gaps = 17/134 (12%)

Query: 49  IYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAEETQNMVAAST-------------- 94
           IYSLT DE Q ++   GK+FGSMNMDE L +IW AEE Q   A++               
Sbjct: 53  IYSLTLDEFQHSLCDSGKNFGSMNMDEFLSSIWNAEENQQQAASNNNNSNNNNLSAAQKG 112

Query: 95  -GPQESLQRQGSLTLPRTLSQKTVDEVWKDISKEYVNXXXXXXXVANVPQ--RQQTLGEM 151
              Q SL RQ SL++P  L +KTV++VW +I KE  N         N     RQ T GEM
Sbjct: 113 ISKQASLPRQNSLSIPAPLCRKTVEQVWSEIHKEQQNHHNINNVAQNTESTPRQPTFGEM 172

Query: 152 TLEEFLVRAGVVRE 165
           TLE+FLV+AGVVRE
Sbjct: 173 TLEDFLVKAGVVRE 186


>IMGA|Medtr6g017880.1 cAMP response element binding, putative
           chr06_pseudomolecule_IMGAG_V3 4400920-4399693 E
           EGN_Mt090430 20090702
          Length = 229

 Score =  107 bits (267), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 63/139 (45%), Positives = 86/139 (61%), Gaps = 20/139 (14%)

Query: 41  FPLARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAEETQ-------NMVAAS 93
            PL+R  S+Y+LT DE+Q+ +G +GK  GSMN+DELLK++W+ E  +       ++ A +
Sbjct: 14  LPLSRSGSLYNLTLDEVQNHLGNLGKPLGSMNLDELLKSVWSVEAGEVSDFGGSDVAATA 73

Query: 94  TGPQESLQ-----RQGSLTLPRTLSQKTVDEVWKDI--SKEYVNXXXXXXXVANVPQRQQ 146
            G  +  Q      Q SLTL   LS+KTVDEVWKD+   K  V+            ++QQ
Sbjct: 74  GGNMQHNQLGGFNSQESLTLSGDLSKKTVDEVWKDMQGKKRGVDRDRKSR------EKQQ 127

Query: 147 TLGEMTLEEFLVRAGVVRE 165
           TLGEMTLE+FLV+AGVV E
Sbjct: 128 TLGEMTLEDFLVKAGVVGE 146


>IMGA|Medtr7g104860.1 bZIP transcription factor, bZIP_1
           chr07_pseudomolecule_IMGAG_V3 23917021-23913325 E
           EGN_Mt090430 20090702
          Length = 320

 Score =  105 bits (261), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/147 (40%), Positives = 91/147 (61%), Gaps = 24/147 (16%)

Query: 43  LARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAEETQNMVAASTGPQESLQR 102
           LAR+ S+Y+LTFDE+Q+ +G +GK  GSMN+DELLK++WT+E TQ      +G  +   +
Sbjct: 16  LAREGSLYNLTFDEVQNQLGNLGKPLGSMNLDELLKSLWTSEATQG-SGLDSGTTDGYMQ 74

Query: 103 QGS---------LTLPRTLSQKTVDEVWKDISKEYVNXXXXXXXVANVPQRQQTLGEMTL 153
            G          LTL   LS+KT+DEVW+D+ ++           A+  +R  TLGEMTL
Sbjct: 75  HGQLASGSSMNPLTLSGDLSKKTIDEVWRDMQQK---------KSASPDRRTATLGEMTL 125

Query: 154 EEFLVRAGVV-----REDAQIAGKINA 175
           E+FL++AGV       ED  ++G++++
Sbjct: 126 EDFLMKAGVATESFPSEDNAMSGRVDS 152



 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/37 (78%), Positives = 31/37 (83%), Gaps = 1/37 (2%)

Query: 334 RGRRATGAV-EKVVERRQRRMIKNRESAARSRARKQV 369
           R R A+G V EK VERRQ+RMIKNRESAARSRARKQ 
Sbjct: 235 RKRVASGVVVEKTVERRQKRMIKNRESAARSRARKQA 271


>IMGA|Medtr2g107890.1 hypothetical protein
           chr02_pseudomolecule_IMGAG_V3 25493244-25486909 E
           EGN_Mt090430 20090702
          Length = 324

 Score = 92.0 bits (227), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/193 (34%), Positives = 104/193 (53%), Gaps = 26/193 (13%)

Query: 44  ARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAEE--------TQNMVAASTG 95
           ++QTSI SLT DE Q   G   K F S+NMDE L +IW++ +        T+N+V     
Sbjct: 23  SKQTSILSLTLDEFQCKSG---KSFSSLNMDEFLASIWSSNDEATTHTHNTKNVVTT--- 76

Query: 96  PQESLQRQ--GSLTLPRTLSQKTVDEVWKDISKEYVN-XXXXXXXVANVPQRQQTLGEMT 152
            Q ++ +Q   S ++P  + +KTVDEVW +I K             +   ++QQTLGEM+
Sbjct: 77  -QHTISQQFGNSFSVPPPICKKTVDEVWSEIHKNQQQFKETNNLKRSETLKKQQTLGEMS 135

Query: 153 LEEFLVRAGVVREDAQIAGKINANGGFYGDL------ARSGNNSGFGLGFQQNRVLALNS 206
           LE+FLV+AGVV++ + +  K N NG    ++      +  G     G+GF   + ++ N 
Sbjct: 136 LEDFLVKAGVVQQSSALPFK-NHNGNVSSNMRPLNIASCYGLRPSMGMGF-STQCVSRNG 193

Query: 207 NNTNQISMHSSNL 219
             T Q+  H++NL
Sbjct: 194 LATYQMLSHNNNL 206


>IMGA|Medtr5g095290.1 bZIP transcription factor, bZIP_1
           chr05_pseudomolecule_IMGAG_V3 37754591-37758985 E
           EGN_Mt090430 20090702
          Length = 264

 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/137 (45%), Positives = 82/137 (59%), Gaps = 14/137 (10%)

Query: 32  GGGSRLPGNFPLARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIWTAE--ETQNM 89
           G  S L  N  L +Q S Y LT DE+ S +G +GK  GSMN+DELL+N+WTAE  +   M
Sbjct: 7   GQQSHLQAN-QLVKQNSWYGLTLDEVNSLLGDLGKPLGSMNLDELLQNVWTAEGNKVVGM 65

Query: 90  VAASTGPQESLQRQGSLTLPRTLSQKTVDEVWKDI----SKEYVNXXXXXXXVANVPQRQ 145
            +       SLQRQ S+TL R LS KTVD+VW++I     K+Y +          V  R+
Sbjct: 66  ESEQVSSSSSLQRQASMTLARALSGKTVDDVWREIQLGQKKQYGDD-------VKVEDRE 118

Query: 146 QTLGEMTLEEFLVRAGV 162
            +LG  TLE+FLV+AG+
Sbjct: 119 MSLGGTTLEDFLVQAGL 135



 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 27/36 (75%)

Query: 334 RGRRATGAVEKVVERRQRRMIKNRESAARSRARKQV 369
           R R A  A EK +ERR RR IKNRESAARSRARKQ 
Sbjct: 180 RKRDAPDAYEKALERRLRRKIKNRESAARSRARKQA 215


>IMGA|Medtr2g107870.1 bZIP transcription factor, bZIP_1
           chr02_pseudomolecule_IMGAG_V3 25477813-25476338 E
           EGN_Mt090430 20090702
          Length = 296

 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 84/169 (49%), Gaps = 17/169 (10%)

Query: 41  FPLARQTSIYSLTFDELQSTMGGIGKDFGSMNMDELLKNIW------TAEETQNMVAAST 94
           F    Q S  SLT D+ Q       K+F S+NMDE L +IW      TA+   N  + +T
Sbjct: 6   FEQEDQNSALSLTLDDFQCNND---KNFSSLNMDEFLASIWSSNDEDTAQTHNNTESVAT 62

Query: 95  GPQESLQRQG-SLTLPRTLSQKTVDEVWKDISKEYVNXXXXXXXVAN-VPQRQQTLGEMT 152
                 Q+ G S ++P  + +KT DEVW +I K             N   ++Q+T GEMT
Sbjct: 63  AEHTISQQLGNSSSVPPPICKKTSDEVWSEIHKNQPQFKEANNLKRNETLKKQETPGEMT 122

Query: 153 LEEFLVRAGVVREDAQIAGKINANGGFYGDL-----ARSGNNSGFGLGF 196
            E+FLV+AGVV++ + ++ + N +G    ++     A SG      +GF
Sbjct: 123 FEDFLVKAGVVKQSSSLSFQ-NHSGNVSNNMEPLNIASSGLRPSMEVGF 170