Jatropha Genome Database
- JcCA0029841.30
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0029841.30 + phase: 0 /partial
(361 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr8g025650.1 RNA-binding region RNP-1 (RNA recognition m... 561 e-160
IMGA|Medtr8g132790.2 RNA-binding region RNP-1 (RNA recognition m... 486 e-138
IMGA|Medtr8g132790.1 RNA-binding region RNP-1 (RNA recognition m... 478 e-135
IMGA|Medtr3g133100.2 Nucleotide-binding, alpha-beta plait chr03_... 466 e-132
IMGA|Medtr3g133100.1 Nucleotide-binding, alpha-beta plait chr03_... 466 e-132
IMGA|Medtr3g148180.1 Nucleotide-binding, alpha-beta plait chr03_... 135 3e-32
IMGA|Medtr8g146650.1 RNA-binding region RNP-1 (RNA recognition m... 133 1e-31
IMGA|Medtr4g129250.1 RNA-binding region RNP-1 (RNA recognition m... 129 2e-30
IMGA|Medtr2g117480.1 Nucleotide-binding, alpha-beta plait chr02_... 127 6e-30
IMGA|Medtr3g087340.1 Nucleotide-binding, alpha-beta plait chr03_... 107 7e-24
IMGA|AC233576_3.1 Polyadenylate binding protein, human types 1, ... 105 5e-23
IMGA|Medtr8g146650.3 RNA-binding region RNP-1 (RNA recognition m... 101 7e-22
IMGA|Medtr8g146650.2 RNA-binding region RNP-1 (RNA recognition m... 100 1e-21
IMGA|Medtr8g132520.1 oligouridylate binding protein, putative ch... 97 1e-20
IMGA|Medtr3g147440.1 RNA-binding region RNP-1 (RNA recognition m... 96 2e-20
IMGA|Medtr4g130250.1 Polyadenylate binding protein, human types ... 91 7e-19
IMGA|Medtr1g024150.1 Ribosomal protein S2; Polyadenylate binding... 89 3e-18
IMGA|Medtr7g124520.1 RNA-binding region RNP-1 (RNA recognition m... 89 4e-18
IMGA|Medtr1g073940.1 Polyadenylate binding protein, human types ... 86 2e-17
IMGA|Medtr1g093610.1 RNA-binding region RNP-1 (RNA recognition m... 72 3e-13
IMGA|Medtr4g141620.1 RNA-binding region RNP-1 (RNA recognition m... 72 6e-13
IMGA|Medtr1g076830.1 RNA-binding region RNP-1 (RNA recognition m... 69 2e-12
IMGA|Medtr1g149790.1 RNA-binding region RNP-1 (RNA recognition m... 67 1e-11
IMGA|Medtr1g065570.1 RNA-binding region RNP-1 (RNA recognition m... 66 2e-11
IMGA|Medtr3g105170.1 Nucleotide-binding, alpha-beta plait chr03_... 66 2e-11
IMGA|Medtr3g110200.1 Nucleotide-binding, alpha-beta plait chr03_... 65 5e-11
IMGA|Medtr3g036670.1 Carbohydrate kinase, PfkB; Nucleotide-bindi... 64 1e-10
IMGA|Medtr8g136920.1 RNA-binding region RNP-1 (RNA recognition m... 64 2e-10
IMGA|Medtr4g127970.1 RNA-binding region RNP-1 (RNA recognition m... 62 5e-10
IMGA|Medtr4g154870.1 RNA-binding region RNP-1 (RNA recognition m... 61 9e-10
IMGA|Medtr4g095640.1 RNA-binding region RNP-1 (RNA recognition m... 60 2e-09
IMGA|Medtr3g105170.2 Nucleotide-binding, alpha-beta plait chr03_... 59 4e-09
IMGA|Medtr3g031110.1 Nucleotide-binding, alpha-beta plait chr03_... 58 6e-09
IMGA|Medtr1g149790.2 Calcium-binding EF-hand; Nucleotide-binding... 57 2e-08
IMGA|Medtr5g047590.1 Nucleotide-binding, alpha-beta plait chr05_... 56 2e-08
IMGA|Medtr7g104960.2 Nucleotide-binding, alpha-beta plait chr07_... 56 3e-08
IMGA|Medtr4g095700.1 RNA-binding region RNP-1 (RNA recognition m... 56 3e-08
IMGA|Medtr7g104960.1 Nucleotide-binding, alpha-beta plait chr07_... 56 3e-08
IMGA|Medtr4g095740.1 RNA-binding region RNP-1 (RNA recognition m... 55 4e-08
IMGA|Medtr2g008300.1 Zinc finger, CCHC-type; Nucleotide-binding,... 54 1e-07
IMGA|Medtr1g093820.1 RNA-binding region RNP-1 (RNA recognition m... 54 1e-07
IMGA|Medtr4g041420.1 RNA-binding region RNP-1 (RNA recognition m... 53 2e-07
IMGA|Medtr3g159840.1 Nucleotide-binding, alpha-beta plait chr03_... 53 3e-07
IMGA|Medtr4g041420.2 Nucleotide-binding, alpha-beta plait chr04_... 53 3e-07
IMGA|Medtr5g078930.2 Nucleotide-binding, alpha-beta plait chr05_... 52 3e-07
IMGA|Medtr5g105300.1 Nucleotide-binding, alpha-beta plait chr05_... 52 3e-07
IMGA|Medtr2g030270.1 Nucleotide-binding, alpha-beta plait chr02_... 52 4e-07
IMGA|CU179634_3.1 RNA-binding region RNP-1 (RNA recognition moti... 51 8e-07
IMGA|Medtr5g078930.1 Nucleotide-binding, alpha-beta plait chr05_... 51 9e-07
IMGA|Medtr4g092490.1 RNA-binding region RNP-1 (RNA recognition m... 50 2e-06
IMGA|Medtr3g076980.1 Nucleotide-binding, alpha-beta plait chr03_... 50 2e-06
IMGA|Medtr4g078600.1 RNA-binding region RNP-1 (RNA recognition m... 50 2e-06
IMGA|Medtr5g078580.1 RNA-binding region RNP-1 (RNA recognition m... 48 8e-06
IMGA|Medtr8g118890.1 RNA-binding region RNP-1 (RNA recognition m... 47 1e-05
>IMGA|Medtr8g025650.1 RNA-binding region RNP-1 (RNA recognition
motif) chr08_pseudomolecule_IMGAG_V3 5261567-5257902 E
EGN_Mt090430 20090702
Length = 392
Score = 561 bits (1447), Expect = e-160, Method: Compositional matrix adjust.
Identities = 264/300 (88%), Positives = 276/300 (92%)
Query: 36 IEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYGF 95
IEPIPSGNLPPGFDPSTCRSVYVGN+HTQVTEPLLQEVF+ TG VEGCKL RKEKSSYGF
Sbjct: 9 IEPIPSGNLPPGFDPSTCRSVYVGNVHTQVTEPLLQEVFAGTGPVEGCKLFRKEKSSYGF 68
Query: 96 IHYYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATL 155
IHY+DRRSAALAIL+LNGRHLFGQPIKVNWAYASGQREDTSGH+NIFVGDLSPEVTDATL
Sbjct: 69 IHYFDRRSAALAILTLNGRHLFGQPIKVNWAYASGQREDTSGHYNIFVGDLSPEVTDATL 128
Query: 156 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 215
FACFSVY SCSDARVMWDQKTGRSRGFGFVSFR+QQDAQSAINDLTGKWLGSRQIRCNWA
Sbjct: 129 FACFSVYQSCSDARVMWDQKTGRSRGFGFVSFRSQQDAQSAINDLTGKWLGSRQIRCNWA 188
Query: 216 TKGAGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLD 275
TKGAG VVELTNG+SE+GK+ ++N+ PENNPQYTTVYVGNL E TQLD
Sbjct: 189 TKGAGGIEEKQNSDSKSVVELTNGSSEDGKEISSNDVPENNPQYTTVYVGNLGSEATQLD 248
Query: 276 LHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQSILCGKQIKCSWGSK 335
LHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGN QS LCGK IKCSWGSK
Sbjct: 249 LHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNAQSYLCGKIIKCSWGSK 308
>IMGA|Medtr8g132790.2 RNA-binding region RNP-1 (RNA recognition
motif) chr08_pseudomolecule_IMGAG_V3 31451636-31456534 E
EGN_Mt090430 20090702
Length = 402
Score = 486 bits (1251), Expect = e-138, Method: Compositional matrix adjust.
Identities = 238/315 (75%), Positives = 261/315 (82%), Gaps = 15/315 (4%)
Query: 26 HPAGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKL 85
HPA L PQIEPI SGNLPPGFD STCRSVYVGNIH QV+EPLLQE+FSS G +EGCKL
Sbjct: 20 HPA--LITPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKL 77
Query: 86 IRKEKSSYGFIHYYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 145
IRKEKSSYGF+ Y+DR SAA+AI++LNGR++FGQ IKVNWAY GQREDTSGHF+IFVGD
Sbjct: 78 IRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGD 137
Query: 146 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 205
LSPEVTDATL+ACFS Y SCSDARVMWDQKTGRSRGFGF +AQSAINDLTGKWL
Sbjct: 138 LSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGF-------EAQSAINDLTGKWL 190
Query: 206 GSRQIRCNWATKGAGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVG 265
GSRQIRCNWATKGA VVELT+GTSEE ++ ++++PE NPQYTTVYVG
Sbjct: 191 GSRQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVG 250
Query: 266 NLAPE-----VTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQ 320
NLAPE VT +DLH HFHALG G IE+VRVQRDKGFGFVRYSTH EAALAIQMGNT+
Sbjct: 251 NLAPEARIHTVTSVDLHHHFHALGVGTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTR 310
Query: 321 SILCGKQIKCSWGSK 335
L GK IKCSWGSK
Sbjct: 311 -FLFGKPIKCSWGSK 324
>IMGA|Medtr8g132790.1 RNA-binding region RNP-1 (RNA recognition
motif) chr08_pseudomolecule_IMGAG_V3 31451636-31456534 E
EGN_Mt090430 20090702
Length = 413
Score = 478 bits (1230), Expect = e-135, Method: Compositional matrix adjust.
Identities = 238/326 (73%), Positives = 261/326 (80%), Gaps = 26/326 (7%)
Query: 26 HPAGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKL 85
HPA L PQIEPI SGNLPPGFD STCRSVYVGNIH QV+EPLLQE+FSS G +EGCKL
Sbjct: 20 HPA--LITPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKL 77
Query: 86 IRKEKSSYGFIHYYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGD 145
IRKEKSSYGF+ Y+DR SAA+AI++LNGR++FGQ IKVNWAY GQREDTSGHF+IFVGD
Sbjct: 78 IRKEKSSYGFVDYFDRSSAAIAIVTLNGRNIFGQSIKVNWAYTRGQREDTSGHFHIFVGD 137
Query: 146 LSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWL 205
LSPEVTDATL+ACFS Y SCSDARVMWDQKTGRSRGFGF +AQSAINDLTGKWL
Sbjct: 138 LSPEVTDATLYACFSAYSSCSDARVMWDQKTGRSRGFGF-------EAQSAINDLTGKWL 190
Query: 206 GSRQIRCNWATKGAGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVG 265
GSRQIRCNWATKGA VVELT+GTSEE ++ ++++PE NPQYTTVYVG
Sbjct: 191 GSRQIRCNWATKGANMNGENQSSESKSVVELTSGTSEEAQEMTSDDSPEKNPQYTTVYVG 250
Query: 266 NLAPE-----VTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQ 320
NLAPE VT +DLH HFHALG G IE+VRVQRDKGFGFVRYSTH EAALAIQMGNT+
Sbjct: 251 NLAPEARIHTVTSVDLHHHFHALGVGTIEDVRVQRDKGFGFVRYSTHGEAALAIQMGNTR 310
Query: 321 SILCGKQI-----------KCSWGSK 335
L GK I KCSWGSK
Sbjct: 311 -FLFGKPIKMHITRKKAVSKCSWGSK 335
>IMGA|Medtr3g133100.2 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 33640121-33629496 F
EGN_Mt090430 20090702
Length = 424
Score = 466 bits (1199), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/315 (70%), Positives = 255/315 (80%), Gaps = 5/315 (1%)
Query: 25 YHPAGLLAPP---QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVE 81
YH G+LA Q+EP+PSGNLPPGFD S CRSVYVGNIH VT+ LL EVF S G +
Sbjct: 12 YHHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLA 71
Query: 82 GCKLIRKEKSSYGFIHYYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNI 141
GCKLIRKEKSSYGF+ Y+DR SAALAI++L+GR L+GQ +KVNWAYA+ REDTSGHFN+
Sbjct: 72 GCKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNV 131
Query: 142 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 201
FVGDLSPEVTDATLFACFSVY +CSDARVMWD KTGRS+G+GFVSFR+ QDAQSAIND+T
Sbjct: 132 FVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMT 191
Query: 202 GKWLGSRQIRCNWATKGA-GXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYT 260
GKWLG+RQIRCNWATKGA G V LTNG+S+ G+D + +APENNP YT
Sbjct: 192 GKWLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYT 251
Query: 261 TVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQ 320
TVYVGNL +VTQ +LH FHALGAGV+EEVRVQ KGFGFVRY+TH EAA+AIQM N +
Sbjct: 252 TVYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGR 311
Query: 321 SILCGKQIKCSWGSK 335
+ GK +KCSWGSK
Sbjct: 312 PVR-GKTMKCSWGSK 325
>IMGA|Medtr3g133100.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 33640121-33629530 F
EGN_Mt090430 20090702
Length = 440
Score = 466 bits (1198), Expect = e-132, Method: Compositional matrix adjust.
Identities = 222/315 (70%), Positives = 255/315 (80%), Gaps = 5/315 (1%)
Query: 25 YHPAGLLAPP---QIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVE 81
YH G+LA Q+EP+PSGNLPPGFD S CRSVYVGNIH VT+ LL EVF S G +
Sbjct: 28 YHHPGMLAAAAMTQMEPVPSGNLPPGFDASACRSVYVGNIHVNVTDKLLAEVFQSAGPLA 87
Query: 82 GCKLIRKEKSSYGFIHYYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNI 141
GCKLIRKEKSSYGF+ Y+DR SAALAI++L+GR L+GQ +KVNWAYA+ REDTSGHFN+
Sbjct: 88 GCKLIRKEKSSYGFVDYHDRASAALAIMTLHGRQLYGQALKVNWAYANSSREDTSGHFNV 147
Query: 142 FVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLT 201
FVGDLSPEVTDATLFACFSVY +CSDARVMWD KTGRS+G+GFVSFR+ QDAQSAIND+T
Sbjct: 148 FVGDLSPEVTDATLFACFSVYTTCSDARVMWDHKTGRSKGYGFVSFRDHQDAQSAINDMT 207
Query: 202 GKWLGSRQIRCNWATKGA-GXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYT 260
GKWLG+RQIRCNWATKGA G V LTNG+S+ G+D + +APENNP YT
Sbjct: 208 GKWLGNRQIRCNWATKGAGGSSNEEKINDSQNAVVLTNGSSDGGQDNSNEDAPENNPSYT 267
Query: 261 TVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQ 320
TVYVGNL +VTQ +LH FHALGAGV+EEVRVQ KGFGFVRY+TH EAA+AIQM N +
Sbjct: 268 TVYVGNLPHDVTQAELHCQFHALGAGVLEEVRVQSGKGFGFVRYNTHEEAAMAIQMANGR 327
Query: 321 SILCGKQIKCSWGSK 335
+ GK +KCSWGSK
Sbjct: 328 PVR-GKTMKCSWGSK 341
>IMGA|Medtr3g148180.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 38523017-38526624 E
EGN_Mt090430 20090702
Length = 420
Score = 135 bits (340), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/293 (32%), Positives = 152/293 (51%), Gaps = 36/293 (12%)
Query: 54 RSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKS----SYGFIHYYDRRSAALAIL 109
++++VG++H + E L F+STG + K+IR +++ YGF+ + +A +
Sbjct: 93 KTLWVGDLHHWMDENYLHRCFASTGEIFSIKVIRNKQTCQTEGYGFVEFTSHGTAEKVLQ 152
Query: 110 SLNGRHLFG--QPIKVNWA-YASG--QREDTSGHFNIFVGDLSPEVTDATLFACFS-VYP 163
+ G + QP ++NWA +++G +R D +IFVGDL+ +VTD L FS YP
Sbjct: 153 TYAGMLMPNTEQPFRLNWATFSTGDHKRSDNVPDLSIFVGDLAADVTDTMLLETFSDKYP 212
Query: 164 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGX 221
S A+V++D TGRS+G+GFV F + + A+N++ G + SR +R AT K +G
Sbjct: 213 SVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALNEMNGVFCSSRAMRIGAATPRKSSGY 272
Query: 222 XXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFH 281
+NGT + +TN TT++VG L P T DL + F
Sbjct: 273 QQGGQ----------SNGTPSQSDTDSTN---------TTIFVGGLDPSATAEDLRQPFS 313
Query: 282 ALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQSILCGKQ-IKCSWG 333
G I V++ KG GFV+++ A A+Q N ++ GKQ ++ SWG
Sbjct: 314 QYGE--IVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTV--GKQTVRLSWG 362
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 80/185 (43%), Gaps = 26/185 (14%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSST-GLVEGCKLIRKEKSS----YGFIHYYDRRSAALAIL 109
S++VG++ VT+ +L E FS V+ K++ + YGF+ + D + A+
Sbjct: 188 SIFVGDLAADVTDTMLLETFSDKYPSVKAAKVVFDANTGRSKGYGFVRFGDDGERSKALN 247
Query: 110 SLNGRHLFGQPIKVNWA-------YASG--------QREDTSGHFNIFVGDLSPEVTDAT 154
+NG + +++ A Y G Q + S + IFVG L P T
Sbjct: 248 EMNGVFCSSRAMRIGAATPRKSSGYQQGGQSNGTPSQSDTDSTNTTIFVGGLDPSATAED 307
Query: 155 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 214
L FS Y ++ +G GFV F N+ +A+ A+ L G +G + +R +W
Sbjct: 308 LRQPFSQYGEIVSVKIP------VGKGCGFVQFANRNNAEEALQKLNGTTVGKQTVRLSW 361
Query: 215 ATKGA 219
A
Sbjct: 362 GRNPA 366
>IMGA|Medtr8g146650.1 RNA-binding region RNP-1 (RNA recognition
motif) chr08_pseudomolecule_IMGAG_V3 35886596-35890858 E
EGN_Mt090430 20090702
Length = 411
Score = 133 bits (335), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/310 (30%), Positives = 160/310 (51%), Gaps = 29/310 (9%)
Query: 34 PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS- 92
P +P +PP +++++G++ + E L FS TG V K+IR ++++
Sbjct: 54 PNAQPPQQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQ 113
Query: 93 ---YGFIHYYDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGD 145
YGF+ + R A + + NG + GQ ++NWA ++SG+ R D S + IFVGD
Sbjct: 114 SEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIFVGD 173
Query: 146 LSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 204
L+ +V+D L F Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G
Sbjct: 174 LAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVL 233
Query: 205 LGSRQIRCNWAT-KGAGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVY 263
+R +R A+ K G + + + + + A N EN+P TT++
Sbjct: 234 CSTRPMRIGPASNKNLG-------------TQTSKASYQNPQGGAQN---ENDPNNTTIF 277
Query: 264 VGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQSIL 323
VGNL P VT L + F G V V++ K GFV+++ + A A+++ N ++L
Sbjct: 278 VGNLDPNVTDEHLKQVFTQYGELV--HVKIPSGKRCGFVQFADRSSAEEALRVLNG-TLL 334
Query: 324 CGKQIKCSWG 333
G+ ++ SWG
Sbjct: 335 GGQNVRLSWG 344
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 49 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYGFIHYYDRRSAALAI 108
DP+ +++VGN+ VT+ L++VF+ G + K+ ++ GF+ + DR SA A+
Sbjct: 270 DPNNT-TIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRC--GFVQFADRSSAEEAL 326
Query: 109 LSLNGRHLFGQPIKVNWAYASGQRE 133
LNG L GQ ++++W + ++
Sbjct: 327 RVLNGTLLGGQNVRLSWGRSPANKQ 351
>IMGA|Medtr4g129250.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 30703448-30699000 F
EGN_Mt090430 20090702
Length = 454
Score = 129 bits (325), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 89/298 (29%), Positives = 146/298 (48%), Gaps = 19/298 (6%)
Query: 50 PSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAA 105
P R++++G++H + E L F+ TG V K+IR +++ YGF+ +Y R A
Sbjct: 112 PEEIRTIWLGDLHHWMDETFLHNCFAHTGEVASAKVIRNKQTGQSEGYGFVEFYTRAMAE 171
Query: 106 LAILSLNGRHL--FGQPIKVNWAYAS-----GQRE--DTSGHFNIFVGDLSPEVTDATLF 156
+ + NG + Q ++NWA S G+R + + ++FVGDL+ +VTDA L
Sbjct: 172 KVLQNFNGTMMPNTDQAFRLNWATFSAAGGGGERRSSEATSDLSVFVGDLAIDVTDAMLQ 231
Query: 157 ACF-SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 215
F S + S A+V+ D TGRS+G+GFV F ++ + A+ ++ G + SR +R A
Sbjct: 232 ETFASKFSSIKGAKVVIDSNTGRSKGYGFVRFGDESERTRAMTEMNGVYCSSRPMRVGVA 291
Query: 216 TKGAGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLD 275
T V L G A E + TT++VG L +++ D
Sbjct: 292 TP--KKTYGNPQQYSSQAVVLAGGGGHSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDED 349
Query: 276 LHRHFHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQSILCGKQIKCSWG 333
L + F L G + V++ KG GFV+ + A AIQ G +++ + ++ SWG
Sbjct: 350 LRQPF--LQFGDVISVKIPVGKGCGFVQLADRKNAEEAIQ-GLNGTVIGKQTVRLSWG 404
>IMGA|Medtr2g117480.1 Nucleotide-binding, alpha-beta plait
chr02_pseudomolecule_IMGAG_V3 27620727-27613740 E
EGN_Mt090430 20090702
Length = 428
Score = 127 bits (320), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 146/295 (49%), Gaps = 18/295 (6%)
Query: 53 CRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRK----EKSSYGFIHYYDRRSAALAI 108
R++++G++ V E L FS TG V K+IR + YGFI + +A +
Sbjct: 14 VRTLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVL 73
Query: 109 LSLNGRHLFG--QPIKVNWA-YASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSV-YP 163
+ NG + G Q ++NWA + G+R +G +IFVGDL+P+VTD L F Y
Sbjct: 74 QTYNGTQMPGTEQTFRLNWASFGIGERRPDAGPDHSIFVGDLAPDVTDYLLQETFRTHYG 133
Query: 164 SCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT--KGAGX 221
S A+V+ D TGRS+G+GFV F ++ + A++++ G + +R +R + AT K G
Sbjct: 134 SVRGAKVVTDPNTGRSKGYGFVKFSDESERNRAMSEMNGVYCSTRPMRISAATPKKTTGY 193
Query: 222 XXXXXXXXXXXVVELTNGTSEEGKDTA--TNEAPENNPQYTTVYVGNLAPEVTQLDLHRH 279
TA PE + TT+YVGNL V++ +L ++
Sbjct: 194 QQNPYAAVVAAAPVPKAIYPVPAYTTAPVNTVPPEYDVNNTTIYVGNLDLNVSEEELKQN 253
Query: 280 FHALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQSILCGKQ-IKCSWG 333
F L G I V+V K GFV++ A A AIQ Q + G+Q I+ SWG
Sbjct: 254 F--LQFGEIVSVKVHPGKACGFVQFGARASAEEAIQ--KMQGKILGQQVIRVSWG 304
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 34 PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSSY 93
P P +PP +D + ++YVGN+ V+E L++ F G + K+ +
Sbjct: 215 PAYTTAPVNTVPPEYDVNNT-TIYVGNLDLNVSEEELKQNFLQFGEIVSVKV--HPGKAC 271
Query: 94 GFIHYYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSG 137
GF+ + R SA AI + G+ L Q I+V+W R+D G
Sbjct: 272 GFVQFGARASAEEAIQKMQGKILGQQVIRVSWGRPQTARQDVPG 315
>IMGA|Medtr3g087340.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 20738248-20732884 E
EGN_Mt090430 20090702
Length = 379
Score = 107 bits (268), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 94/168 (55%), Gaps = 7/168 (4%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKL----IRKEKSSYGFIHYYDRRSAALAILS 110
+ YVGN+ Q++E LL E+F G V + + + YGF+ + A AI
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKV 85
Query: 111 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS-CSDAR 169
LN L+G+PI+VN A + D N+F+G+L P+V + L+ FS + ++ +
Sbjct: 86 LNMIKLYGKPIRVNKASQDKKSLDVGA--NLFIGNLDPDVDEKLLYDTFSAFGVIVTNPK 143
Query: 170 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATK 217
+M D TG SRGFGF+S+ + + + SAI + G++L +RQI ++A K
Sbjct: 144 IMRDPDTGNSRGFGFISYDSFEASDSAIEAMNGQYLCNRQITVSYAYK 191
>IMGA|AC233576_3.1 Polyadenylate binding protein, human types 1, 2,
3, 4 AC233576.2 6823-10801 H EGN_Mt090430 20090702
Length = 622
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 130/281 (46%), Gaps = 46/281 (16%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAALAILS 110
S+YVG++ V + L ++FS V ++ R + + YG+++Y + R AA A+ +
Sbjct: 26 SLYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNYSNARDAANAMEN 85
Query: 111 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 170
LN L G+PI++ +++ T G N+F+ +L + + L FSV+ + +V
Sbjct: 86 LNYVPLNGKPIRIMFSHRDPLIRKT-GFANLFIKNLETSIDNKALHETFSVFGNVLSCKV 144
Query: 171 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGXXXXXXXXXX 230
D G S+G GFV F N Q A++AI L G+ + +++ + +
Sbjct: 145 AMD-SNGHSKGHGFVQFDNDQSAKNAIEKLDGRLMNDKKVYVGYFVRC------------ 191
Query: 231 XXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEE 290
++P++T VYV NL+ T DL + F+ GVI
Sbjct: 192 ---------------------QERSSPKFTNVYVKNLSESYTNEDLKQLFNTF--GVITS 228
Query: 291 VRVQRD-----KGFGFVRYSTHAEAALAIQMGNTQSILCGK 326
V++ +D K FGFV + + AA A++ N + GK
Sbjct: 229 VKIMKDENGNSKRFGFVNFQSSDSAATAVEKLNGSTTNDGK 269
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 92/182 (50%), Gaps = 20/182 (10%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS---YGFIHYYDRRSAALAILSL 111
+VYV N+ T L+++F++ G++ K+++ E + +GF+++ SAA A+ L
Sbjct: 201 NVYVKNLSESYTNEDLKQLFNTFGVITSVKIMKDENGNSKRFGFVNFQSSDSAATAVEKL 260
Query: 112 NGRHLF-GQPIKVNWAYASGQREDTSGHF---------------NIFVGDLSPEVTDATL 155
NG G+ + V A +RE F N+++ ++ + + L
Sbjct: 261 NGSTTNDGKVLFVGRAQKKSEREAELKAFFEQEKLKRYEKFQGANLYLKNIDKSLNEEKL 320
Query: 156 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 215
FS + + + +VM D + GRS+G GFV+F ++A AI+++ GK +G + + + A
Sbjct: 321 KELFSEFGTITSCKVMSDAR-GRSKGVGFVAFTTPEEASKAIDEMNGKIIGQKPVYVSVA 379
Query: 216 TK 217
+
Sbjct: 380 QR 381
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 88/215 (40%), Gaps = 45/215 (20%)
Query: 128 ASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSF 187
++G+ E++S ++VGDL V DA L+ FS RV DQ T S G+G+V++
Sbjct: 18 SAGRFENSS----LYVGDLQGNVNDAQLYDLFSQIAPVISVRVCRDQMTQSSLGYGYVNY 73
Query: 188 RNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGXXXXXXXXXXXXVVELTNGTSEEGKDT 247
N +DA +A+ +L L + IR ++ + L T
Sbjct: 74 SNARDAANAMENLNYVPLNGKPIRIMFSHRDP----------------LIRKTG------ 111
Query: 248 ATNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEEVRVQRD---KGFGFVRY 304
+ +++ NL + LH F G + +V + + KG GFV++
Sbjct: 112 -----------FANLFIKNLETSIDNKALHETFSVFGNVLSCKVAMDSNGHSKGHGFVQF 160
Query: 305 STHAEAALAIQ-----MGNTQSILCGKQIKCSWGS 334
A AI+ + N + + G ++C S
Sbjct: 161 DNDQSAKNAIEKLDGRLMNDKKVYVGYFVRCQERS 195
>IMGA|Medtr8g146650.3 RNA-binding region RNP-1 (RNA recognition
motif) chr08_pseudomolecule_IMGAG_V3 35886596-35890858 E
EGN_Mt090430 20090702
Length = 273
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 102/188 (54%), Gaps = 9/188 (4%)
Query: 34 PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS- 92
P +P +PP +++++G++ + E L FS TG V K+IR ++++
Sbjct: 54 PNAQPPQQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQ 113
Query: 93 ---YGFIHYYDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGD 145
YGF+ + R A + + NG + GQ ++NWA ++SG+ R D S + IFVGD
Sbjct: 114 SEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIFVGD 173
Query: 146 LSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 204
L+ +V+D L F Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G
Sbjct: 174 LAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVL 233
Query: 205 LGSRQIRC 212
+R +R
Sbjct: 234 CSTRPMRI 241
>IMGA|Medtr8g146650.2 RNA-binding region RNP-1 (RNA recognition
motif) chr08_pseudomolecule_IMGAG_V3 35886596-35890858 E
EGN_Mt090430 20090702
Length = 277
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 102/187 (54%), Gaps = 9/187 (4%)
Query: 34 PQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS- 92
P +P +PP +++++G++ + E L FS TG V K+IR ++++
Sbjct: 54 PNAQPPQQSAVPPPSSADEVKTLWIGDLQYWMDENYLYNCFSHTGEVGSVKVIRNKQTNQ 113
Query: 93 ---YGFIHYYDRRSAALAILSLNGRHL--FGQPIKVNWA-YASGQ-REDTSGHFNIFVGD 145
YGF+ + R A + + NG + GQ ++NWA ++SG+ R D S + IFVGD
Sbjct: 114 SEGYGFLEFISRAGAERVLQTFNGTIMPNGGQNFRLNWATFSSGEKRHDDSPDYTIFVGD 173
Query: 146 LSPEVTDATLFACFSV-YPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 204
L+ +V+D L F Y S A+V+ D+ TGR++G+GFV F ++ + A+ ++ G
Sbjct: 174 LAADVSDHHLTEVFRTRYNSVKGAKVVIDRTTGRTKGYGFVRFADESEQMRAMTEMQGVL 233
Query: 205 LGSRQIR 211
+R +R
Sbjct: 234 CSTRPMR 240
>IMGA|Medtr8g132520.1 oligouridylate binding protein, putative
chr08_pseudomolecule_IMGAG_V3 31337161-31335694 E
EGN_Mt090430 20090702
Length = 82
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 51/60 (85%), Gaps = 2/60 (3%)
Query: 26 HPAGLLAPPQIEPIPSGNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKL 85
HPA L PQIEPI SGNLPPGFD STCRSVYVGNIH QV+EPLLQE+FSS G +EGCKL
Sbjct: 20 HPA--LITPQIEPILSGNLPPGFDSSTCRSVYVGNIHPQVSEPLLQELFSSAGALEGCKL 77
>IMGA|Medtr3g147440.1 RNA-binding region RNP-1 (RNA recognition
motif) chr03_pseudomolecule_IMGAG_V3 38172161-38182137 E
EGN_Mt090430 20090702
Length = 622
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 119/262 (45%), Gaps = 42/262 (16%)
Query: 52 TCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAALA 107
T S+YVG++ VT+ L ++F+ G V ++ R S YG++++ + AA A
Sbjct: 22 TTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDAAKA 81
Query: 108 ILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSD 167
+ LN L +PI++ +++ SG NIF+ +L + L+ FS++ +
Sbjct: 82 MDVLNFTPLNNKPIRIMYSHRDPSVR-KSGAANIFIKNLDRAIDHKALYDTFSIFGNILS 140
Query: 168 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGXXXXXXX 227
++ D +G S+G+GFV F N++ AQSAI+ L G L + + +
Sbjct: 141 CKIAMD-ASGLSKGYGFVQFENEESAQSAIDKLNGMLLNDKPVYVGHFQR---------- 189
Query: 228 XXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGV 287
++ +D A + A NN VYV NL+ VT DL F G
Sbjct: 190 --------------KQDRDNALSNAKFNN-----VYVKNLSESVTDDDLKNTFGEY--GT 228
Query: 288 IEEVRVQRD-----KGFGFVRY 304
I V RD K FGFV +
Sbjct: 229 ITSAVVMRDVDGKSKCFGFVNF 250
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 128/302 (42%), Gaps = 36/302 (11%)
Query: 49 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEK---SSYGFIHYYDR 101
DPS +S +++ N+ + L + FS G + CK+ YGF+ + +
Sbjct: 103 DPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQFENE 162
Query: 102 RSAALAILSLNGRHLFGQPIKVNWAYASGQRED--TSGHFN-IFVGDLSPEVTDATLFAC 158
SA AI LNG L +P+ V R++ ++ FN ++V +LS VTD L
Sbjct: 163 ESAQSAIDKLNGMLLNDKPVYVGHFQRKQDRDNALSNAKFNNVYVKNLSESVTDDDLKNT 222
Query: 159 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 218
F Y + + A VM D G+S+ FGFV+F N A A+ L GK ++ A K
Sbjct: 223 FGEYGTITSAVVMRD-VDGKSKCFGFVNFENADAAAEAVEALNGKKFDDKEWYVGKALK- 280
Query: 219 AGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHR 278
+EL + K+T N +Y+ NL VT L
Sbjct: 281 ----------KYERELELKERHEQSMKETVDKFYGAN------LYLKNLDDSVTDEKLSE 324
Query: 279 HFHALGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTQSILCGKQIKCSWG 333
F G + ++ RD +G GFV +ST EA A+ N + ++ GK + +
Sbjct: 325 LFSEF--GTVTSCKILRDPQGISRGSGFVAFSTPEEATRALAEMNGK-MVAGKPLYVAPA 381
Query: 334 SK 335
K
Sbjct: 382 QK 383
>IMGA|Medtr4g130250.1 Polyadenylate binding protein, human types 1,
2, 3, 4 chr04_pseudomolecule_IMGAG_V3 31223844-31218133
E EGN_Mt090430 20090702
Length = 654
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 126/277 (45%), Gaps = 42/277 (15%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIR----KEKSSYGFIHYYDRRSAALAILS 110
S+YVG++ VT+ L ++F+ G V ++ R + YG+++Y + + AA A+
Sbjct: 35 SLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARALDV 94
Query: 111 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 170
LN L +PI++ +++ SG NIF+ +L + L FS + + +V
Sbjct: 95 LNFTPLNNRPIRIMYSHRDPSIR-KSGQGNIFIKNLDKAIDHKALHDTFSSFGNILSCKV 153
Query: 171 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGXXXXXXXXXX 230
D +G+S+G+GFV F ++ AQ AI L G L +Q+ +
Sbjct: 154 AVD-GSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLR------------- 199
Query: 231 XXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGVIEE 290
++ +++ + A NN V+V NL+ T +L + F G I
Sbjct: 200 -----------KQERESTGDRAKFNN-----VFVKNLSESTTDDELKKTFGEF--GTITS 241
Query: 291 VRVQRD-----KGFGFVRYSTHAEAALAIQMGNTQSI 322
V RD K FGFV + + +AA A++ N + I
Sbjct: 242 AVVMRDGDGKSKCFGFVNFESTDDAARAVEALNGKKI 278
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 121/281 (43%), Gaps = 35/281 (12%)
Query: 49 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRK---EKSSYGFIHYYDR 101
DPS +S +++ N+ + L + FSS G + CK+ + YGF+ +
Sbjct: 113 DPSIRKSGQGNIFIKNLDKAIDHKALHDTFSSFGNILSCKVAVDGSGQSKGYGFVQFDTE 172
Query: 102 RSAALAILSLNGRHLFGQPIKVNWAYASGQRE---DTSGHFNIFVGDLSPEVTDATLFAC 158
+A AI LNG L + + V +RE D + N+FV +LS TD L
Sbjct: 173 EAAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTGDRAKFNNVFVKNLSESTTDDELKKT 232
Query: 159 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 218
F + + + A VM D G+S+ FGFV+F + DA A+ L GK + ++ A K
Sbjct: 233 FGEFGTITSAVVMRD-GDGKSKCFGFVNFESTDDAARAVEALNGKKIDDKEWYVGKAQKK 291
Query: 219 AGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHR 278
+ EL + K+ A + Q +YV NL + L
Sbjct: 292 SEREH-----------ELKIKFEQSMKEAA------DKYQGANLYVKNLDDSIADEKLKE 334
Query: 279 HFHALGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 314
F + G I +V RD +G GFV +ST EA+ A+
Sbjct: 335 LFSSY--GTITSCKVMRDPNGVSRGSGFVAFSTPEEASRAL 373
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 49 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRK---EKSSYGFIHYYDRRSAA 105
D + +V+V N+ T+ L++ F G + ++R + +GF+++ AA
Sbjct: 208 DRAKFNNVFVKNLSESTTDDELKKTFGEFGTITSAVVMRDGDGKSKCFGFVNFESTDDAA 267
Query: 106 LAILSLNGRHLFGQPIKVNWAYASGQRE---------------DTSGHFNIFVGDLSPEV 150
A+ +LNG+ + + V A +RE D N++V +L +
Sbjct: 268 RAVEALNGKKIDDKEWYVGKAQKKSEREHELKIKFEQSMKEAADKYQGANLYVKNLDDSI 327
Query: 151 TDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQI 210
D L FS Y + + +VM D G SRG GFV+F ++A A+ ++ GK + S+ +
Sbjct: 328 ADEKLKELFSSYGTITSCKVMRD-PNGVSRGSGFVAFSTPEEASRALLEMNGKMVASKPL 386
Query: 211 RCNWATK 217
A +
Sbjct: 387 YVTLAQR 393
>IMGA|Medtr1g024150.1 Ribosomal protein S2; Polyadenylate binding
protein, human types 1, 2, 3, 4
chr01_pseudomolecule_IMGAG_V3 5615321-5620543 F
EGN_Mt090430 20090702
Length = 647
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 130/297 (43%), Gaps = 39/297 (13%)
Query: 34 PQIEPIPSGNLPPGF-DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIR----K 88
P P PS + P + S+YVG++ V + L ++F+ G V ++ R +
Sbjct: 11 PAPVPAPSNGVVPNVANQFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATR 70
Query: 89 EKSSYGFIHYYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSP 148
YG++++ + + AA A+ LN + + I+V +++ SG NIF+ +L
Sbjct: 71 RSLGYGYVNFTNPQDAARALDVLNFTPMNNKSIRVMYSHRDPSSR-KSGTANIFIKNLDK 129
Query: 149 EVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSR 208
+ L FS + ++ D +G+S+G+GFV F + AQ+AI+ L G + +
Sbjct: 130 TIDHKALHDTFSSFGQIMSCKIATD-GSGQSKGYGFVQFEAEDSAQNAIDKLNGMLINDK 188
Query: 209 QIRCNWATKGAGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLA 268
Q+ + ++ +D ++ NN VYV NL+
Sbjct: 189 QVFVGHFLR------------------------KQDRDNVLSKTKFNN-----VYVKNLS 219
Query: 269 PEVTQLDLHRHFHALG---AGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQSI 322
T+ DL F A G + V+ R K FGFV + +AA A++ N + +
Sbjct: 220 ESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAKAVEALNGKKV 276
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 127/291 (43%), Gaps = 34/291 (11%)
Query: 49 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRK---EKSSYGFIHYYDR 101
DPS+ +S +++ N+ + L + FSS G + CK+ + YGF+ +
Sbjct: 111 DPSSRKSGTANIFIKNLDKTIDHKALHDTFSSFGQIMSCKIATDGSGQSKGYGFVQFEAE 170
Query: 102 RSAALAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFAC 158
SA AI LNG + + + V R++ + N++V +LS T+ L
Sbjct: 171 DSAQNAIDKLNGMLINDKQVFVGHFLRKQDRDNVLSKTKFNNVYVKNLSESFTEDDLKNE 230
Query: 159 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 218
F Y + + A +M D GRS+ FGFV+F N +DA A+ L GK + ++ A K
Sbjct: 231 FGAYGTITSAVLMRD-ADGRSKCFGFVNFENAEDAAKAVEALNGKKVDDKEWYVGKAQKK 289
Query: 219 AGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHR 278
+ EL + K++ ++ Q +Y+ NL +T L
Sbjct: 290 SEREQ-----------ELKGRFEQTVKESVVDKF-----QGLNLYLKNLDDSITDEKLKE 333
Query: 279 HFHALGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGNTQSILC 324
F G I ++ RD +G GFV +ST EA+ A+ N + I+
Sbjct: 334 MFSEF--GTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMNGKMIVS 382
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 20/182 (10%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRK---EKSSYGFIHYYDRRSAALAILSL 111
+VYV N+ TE L+ F + G + L+R +GF+++ + AA A+ +L
Sbjct: 212 NVYVKNLSESFTEDDLKNEFGAYGTITSAVLMRDADGRSKCFGFVNFENAEDAAKAVEAL 271
Query: 112 NGRHLFGQPIKVNWAYASGQRE-DTSGHF---------------NIFVGDLSPEVTDATL 155
NG+ + + V A +RE + G F N+++ +L +TD L
Sbjct: 272 NGKKVDDKEWYVGKAQKKSEREQELKGRFEQTVKESVVDKFQGLNLYLKNLDDSITDEKL 331
Query: 156 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 215
FS + + + ++M D G SRG GFV+F ++A A+ ++ GK + S+ + A
Sbjct: 332 KEMFSEFGTITSYKIMRD-PNGVSRGSGFVAFSTPEEASRALGEMNGKMIVSKPLYVAVA 390
Query: 216 TK 217
+
Sbjct: 391 QR 392
>IMGA|Medtr7g124520.1 RNA-binding region RNP-1 (RNA recognition
motif) chr07_pseudomolecule_IMGAG_V3 29250550-29254655 H
EGN_Mt090430 20090702
Length = 629
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 47/285 (16%)
Query: 44 LPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYY 99
+PP P+ S+YVG++H +++ L + FS + ++ R S YG++++
Sbjct: 3 VPPSATPA---SLYVGDLHPDLSDSQLHDAFSDFKTLASVRICRDSSSGKSLCYGYVNFL 59
Query: 100 DRRSAALAILSLNGRHLFGQPIKVNWAYAS-GQREDTSGHFNIFVGDLSPEVTDATLFAC 158
A AI N L G+ I+V W+ R+ G N+FV +L+ + ++ L
Sbjct: 60 SPHDAIRAIEVKNHSTLNGKAIRVMWSRRDPDARKSCIG--NVFVKNLAESIDNSGLEDM 117
Query: 159 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 218
F + + ++V+ + G+S+G+GFV F ++ A +AI L G +G +QI K
Sbjct: 118 FKKFGNILSSKVVMSE-DGKSKGYGFVQFETEESANAAIERLNGYLVGDKQIYVGKFVKK 176
Query: 219 AGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHR 278
+ G DT +YT +Y+ NL ++++ L
Sbjct: 177 SDRISS-------------------GPDT----------RYTNLYMKNLDLDISETLLRE 207
Query: 279 HFHALGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAIQMGN 318
F + G I + V +D KGFGFV + +A A++ N
Sbjct: 208 KFSSFGK--IISLAVAKDSNGMSKGFGFVNFDNPEDAKRAMETMN 250
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 122/281 (43%), Gaps = 35/281 (12%)
Query: 49 DPSTCRS----VYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKE---KSSYGFIHYYDR 101
DP +S V+V N+ + L+++F G + K++ E YGF+ +
Sbjct: 89 DPDARKSCIGNVFVKNLAESIDNSGLEDMFKKFGNILSSKVVMSEDGKSKGYGFVQFETE 148
Query: 102 RSAALAILSLNGRHLFGQPIKVNWAYASGQREDT---SGHFNIFVGDLSPEVTDATLFAC 158
SA AI LNG + + I V R + + + N+++ +L ++++ L
Sbjct: 149 ESANAAIERLNGYLVGDKQIYVGKFVKKSDRISSGPDTRYTNLYMKNLDLDISETLLREK 208
Query: 159 FSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKG 218
FS + V D G S+GFGFV+F N +DA+ A+ + G LGS+ + A K
Sbjct: 209 FSSFGKIISLAVAKDS-NGMSKGFGFVNFDNPEDAKRAMETMNGLQLGSKILYVARAQKK 267
Query: 219 AGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHR 278
A ++ + EE + + +N +YV N+ V+ L
Sbjct: 268 AERE------------QILHQQFEEKRKEQVLKYKGSN-----IYVKNIDDNVSDEGLRD 310
Query: 279 HFHALGAGVIEEVRVQRD-----KGFGFVRYSTHAEAALAI 314
HF G I ++ RD KGFGFV +ST EA A+
Sbjct: 311 HFSV--CGTITSAKIMRDDKGISKGFGFVCFSTPEEANKAV 349
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 84/181 (46%), Gaps = 19/181 (10%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEK---SSYGFIHYYDRRSAALAILSL 111
++Y+ N+ ++E LL+E FSS G + + + +GF+++ + A A+ ++
Sbjct: 190 NLYMKNLDLDISETLLREKFSSFGKIISLAVAKDSNGMSKGFGFVNFDNPEDAKRAMETM 249
Query: 112 NGRHLFGQPIKVNWAYASGQREDTSGH---------------FNIFVGDLSPEVTDATLF 156
NG L + + V A +RE NI+V ++ V+D L
Sbjct: 250 NGLQLGSKILYVARAQKKAEREQILHQQFEEKRKEQVLKYKGSNIYVKNIDDNVSDEGLR 309
Query: 157 ACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 216
FSV + + A++M D K G S+GFGFV F ++A A+N G + + + A
Sbjct: 310 DHFSVCGTITSAKIMRDDK-GISKGFGFVCFSTPEEANKAVNSFHGFMFHGKPLYVSLAQ 368
Query: 217 K 217
+
Sbjct: 369 R 369
>IMGA|Medtr1g073940.1 Polyadenylate binding protein, human types 1,
2, 3, 4 chr01_pseudomolecule_IMGAG_V3 14861469-14857245
E EGN_Mt090430 20090702
Length = 543
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 120/274 (43%), Gaps = 42/274 (15%)
Query: 51 STCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAAL 106
S ++YVG++H+ VT+ L + FS + ++ + + YG+++ + A
Sbjct: 12 SPAATLYVGDLHSDVTDAQLYKAFSEFNTLISARVCKDSATGKSLCYGYVNLSSHQEAIR 71
Query: 107 AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 166
AI N L G+ I+V W SG N+FV +L+ + + L F Y +
Sbjct: 72 AIELKNHSSLNGKVIRVMWLSRDADAR-KSGKGNVFVKNLAASIDNVGLHDLFQKYGNIL 130
Query: 167 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGXXXXXX 226
+++ + G+S+GFG++ F +++ A AI + G + +QI +
Sbjct: 131 SSKIARSE-DGKSKGFGYIQFDSEESANVAIQKMNGSTVRDKQIYVGKFIR--------- 180
Query: 227 XXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAG 286
+ P+ + ++T +YV NL P VT+ L F + G
Sbjct: 181 --------------------KSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGK- 219
Query: 287 VIEEVRVQRD-----KGFGFVRYSTHAEAALAIQ 315
I + +++D KGFGFV Y + +A A++
Sbjct: 220 -IVSLAIKKDENGQSKGFGFVNYDSPDDARRAME 252
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 116/268 (43%), Gaps = 37/268 (13%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKE---KSSYGFIHYYDRRSAALAILSL 111
+V+V N+ + L ++F G + K+ R E +G+I + SA +AI +
Sbjct: 104 NVFVKNLAASIDNVGLHDLFQKYGNILSSKIARSEDGKSKGFGYIQFDSEESANVAIQKM 163
Query: 112 NGRHLFGQPIKVNWAYASGQRE--DTSGHF-NIFVGDLSPEVTDATLFACFSVYPSCSDA 168
NG + + I V +R D F N++V +L P VT+ L FS +
Sbjct: 164 NGSTVRDKQIYVGKFIRKSERSLPDLDAKFTNLYVKNLDPVVTEKHLGEKFSSFGKIVSL 223
Query: 169 RVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGAGXXXXXXXX 228
+ D+ G+S+GFGFV++ + DA+ A+ + G GS+ + A K
Sbjct: 224 AIKKDE-NGQSKGFGFVNYDSPDDARRAMEAMDGSQFGSKILYVARAQKKVEREQI---- 278
Query: 229 XXXXVVELTNGTSEEG-KDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHRHFHALGAGV 287
L + E+G K +N +YV N+ V +L HF A G
Sbjct: 279 -------LHHLFVEKGLKHMGSN-----------IYVKNIDTSVGDEELRDHFSACGE-- 318
Query: 288 IEEVRVQRD-----KGFGFVRYSTHAEA 310
+ +V RD KGFGFV +ST EA
Sbjct: 319 VLSAKVMRDDKGTSKGFGFVCFSTVVEA 346
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 15/164 (9%)
Query: 55 SVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEK---SSYGFIHYYDRRSAALAILSL 111
++YV N+ VTE L E FSS G + + + E +GF++Y A A+ ++
Sbjct: 195 NLYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAM 254
Query: 112 NGRHLFGQPIKVNWAYASGQREDTSGHF-----------NIFVGDLSPEVTDATLFACFS 160
+G + + V A +RE H NI+V ++ V D L FS
Sbjct: 255 DGSQFGSKILYVARAQKKVEREQILHHLFVEKGLKHMGSNIYVKNIDTSVGDEELRDHFS 314
Query: 161 VYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 204
A+VM D K G S+GFGFV F +A +++ G+
Sbjct: 315 ACGEVLSAKVMRDDK-GTSKGFGFVCFSTVVEAFKSMSCFNGEL 357
>IMGA|Medtr1g093610.1 RNA-binding region RNP-1 (RNA recognition
motif) chr01_pseudomolecule_IMGAG_V3 19101701-19095066 E
EGN_Mt090430 20090702
Length = 240
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 51/74 (68%)
Query: 139 FNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 198
+ +F GDL EV D L F+ +PS + ARV+ D++TG+++G+GF+SF N D +A+
Sbjct: 132 YRLFCGDLGNEVNDDVLSKAFTRFPSFNMARVVRDKRTGKTKGYGFISFANPADLAAALK 191
Query: 199 DLTGKWLGSRQIRC 212
++ GK++G+R I+
Sbjct: 192 EMNGKYVGNRPIKL 205
>IMGA|Medtr4g141620.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 35001150-35007246 F
EGN_Mt090430 20090702
Length = 567
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 92/197 (46%), Gaps = 21/197 (10%)
Query: 43 NLPPGFDPS-TCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIH 97
N+ P DP R+V+ + + TE + E FS G V +LI S G+I
Sbjct: 190 NVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIE 249
Query: 98 YYDRRSAALAILSLNGRHLFGQPIKVNWAYASG---QREDTSG----------HFNIFVG 144
+YD S +AI +L+G+ L GQP+ V + A Q +SG ++VG
Sbjct: 250 FYDAMSVPMAI-ALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYGAVDRKLYVG 308
Query: 145 DLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 204
+L +T+A L F + ++ D +TG +GFGFV F + + A++A L GK
Sbjct: 309 NLHFNMTEANLREIFEPFGQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKAA-QSLNGKL 367
Query: 205 -LGSRQIRCNWATKGAG 220
+ R I+ + T G
Sbjct: 368 EIAGRTIKVSSVTDHVG 384
>IMGA|Medtr1g076830.1 RNA-binding region RNP-1 (RNA recognition
motif) chr01_pseudomolecule_IMGAG_V3 15462280-15464789 F
EGN_Mt090430 20090702
Length = 280
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 91/201 (45%), Gaps = 29/201 (14%)
Query: 42 GNLPPGFDPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIH 97
G+ P + P+ + ++VGN+ V L E+F + G VE ++I + + +GF+
Sbjct: 74 GDDTPSYSPN--QRLFVGNLPFSVDSAQLAEIFENAGDVEMVEVIYDKSTGRSRGFGFVT 131
Query: 98 YYDRRSAALAILSLNGRHLFGQPIKVNWAYASGQREDTS--------------------- 136
A LNG + G+ ++VN R + S
Sbjct: 132 MSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPPPRSENSRFGENPRFGGDRPRGPPRGGS 191
Query: 137 --GHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQ 194
G + VG+L+ V + L + F +A+V++D+++GRSRGFGFV+F + +
Sbjct: 192 SDGDNRVHVGNLAWGVDNLALESLFGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVD 251
Query: 195 SAINDLTGKWLGSRQIRCNWA 215
SAI L G L R IR + A
Sbjct: 252 SAIRTLDGADLNGRAIRVSPA 272
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 96/236 (40%), Gaps = 26/236 (11%)
Query: 110 SLNGRHLFGQPIKVNWAYASGQREDT----------SGHFNIFVGDLSPEVTDATLFACF 159
SL+ H F + V+ + Q EDT S + +FVG+L V A L F
Sbjct: 47 SLSISHRFISRVAVSSEF--DQEEDTFDDGDDTPSYSPNQRLFVGNLPFSVDSAQLAEIF 104
Query: 160 SVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWATKGA 219
V++D+ TGRSRGFGFV+ + + ++A L G + R++R N
Sbjct: 105 ENAGDVEMVEVIYDKSTGRSRGFGFVTMSSAAEVEAAAQQLNGYVVDGRELRVNAGPPPP 164
Query: 220 GXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYTTVYVGNLAPEVTQLDLHRH 279
G G + +N V+VGNLA V L L
Sbjct: 165 PRSENSRFGENPRF----GGDRPRGPPRGGSSDGDNR-----VHVGNLAWGVDNLALESL 215
Query: 280 F----HALGAGVIEEVRVQRDKGFGFVRYSTHAEAALAIQMGNTQSILCGKQIKCS 331
F L A VI + R +GFGFV +S+ E AI+ + L G+ I+ S
Sbjct: 216 FGEQGQVLEAKVIYDRESGRSRGFGFVTFSSADEVDSAIRTLDGAD-LNGRAIRVS 270
>IMGA|Medtr1g149790.1 RNA-binding region RNP-1 (RNA recognition
motif); Calcium-binding EF-hand
chr01_pseudomolecule_IMGAG_V3 33134581-33131894 E
EGN_Mt090430 20090702
Length = 311
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 84/182 (46%), Gaps = 14/182 (7%)
Query: 49 DPSTCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKL----IRKEKSSYGFIHYYDRRSA 104
+ + R ++VGN+ ++ L ++F G V ++ I + F+ + A
Sbjct: 103 ESTQSRRLFVGNLPFSLSSSQLAQLFGEAGNVVSVEILYDDITNRSRGFAFVTMGNVEDA 162
Query: 105 ALAILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHF--------NIFVGDLSPEVTDAT 154
AI +G + G+ IKVN+ G+R + I+ G+L ++T
Sbjct: 163 EEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLGWDMTSQY 222
Query: 155 LFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 214
L F+ P A+V++++ G+SRG+GFVSF +D + A++ + G + R +R
Sbjct: 223 LRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRPLRLKL 282
Query: 215 AT 216
A
Sbjct: 283 AV 284
>IMGA|Medtr1g065570.1 RNA-binding region RNP-1 (RNA recognition
motif) chr01_pseudomolecule_IMGAG_V3 13058238-13061069 F
EGN_Mt090430 20090702
Length = 285
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 85/197 (43%), Gaps = 39/197 (19%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
++ G+L V A L Y S V++D+ TG+SRGF FV+ +D + I +L
Sbjct: 115 LYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNL 174
Query: 201 TGKWLGSRQIRCNWATKGAGXXXXXXXXXXXXVVELTNGTSEEGKDTATNEAPENNPQYT 260
GK R +R N++ D + P
Sbjct: 175 DGKEFMGRTLRVNFS------------------------------DKPKPKEPLYPETEY 204
Query: 261 TVYVGNLAPEVTQLDLHRHFH----ALGAGVIEEVRVQRDKGFGFVRYSTHAE--AALAI 314
++VGNLA VT L + F +GA V+ + + +G+GFV Y+T +E ALAI
Sbjct: 205 KLFVGNLAWTVTSESLTQAFQEHGTVVGARVLFDGETGKSRGYGFVSYATKSEMDTALAI 264
Query: 315 QMGNTQSILCGKQIKCS 331
M N + L G+ ++ S
Sbjct: 265 -MDNVE--LEGRTLRVS 278
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/166 (25%), Positives = 80/166 (48%), Gaps = 6/166 (3%)
Query: 56 VYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAALAILSL 111
+Y GN+ V LL + G E +++ + + F+ I +L
Sbjct: 115 LYFGNLPYSVDSALLAGLIEEYGSAELIEVLYDRDTGKSRGFAFVTMSCVEDCNAVIQNL 174
Query: 112 NGRHLFGQPIKVNWAYASGQREDT--SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDAR 169
+G+ G+ ++VN++ +E + +FVG+L+ VT +L F + + AR
Sbjct: 175 DGKEFMGRTLRVNFSDKPKPKEPLYPETEYKLFVGNLAWTVTSESLTQAFQEHGTVVGAR 234
Query: 170 VMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 215
V++D +TG+SRG+GFVS+ + + +A+ + L R +R + A
Sbjct: 235 VLFDGETGKSRGYGFVSYATKSEMDTALAIMDNVELEGRTLRVSLA 280
>IMGA|Medtr3g105170.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 26247518-26245658 F
EGN_Mt090430 20090702
Length = 146
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
+F+G LS V D +L F+ Y +ARV+ D++TGRSRGFGFV+F +++ A SA++ +
Sbjct: 38 LFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSALS-M 96
Query: 201 TGKWLGSRQIRCNWA 215
G+ L R IR ++A
Sbjct: 97 DGQDLNGRNIRVSYA 111
>IMGA|Medtr3g110200.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 27732870-27731832 E
EGN_Mt090430 20090702
Length = 135
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 49/75 (65%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
+FVG LS V + +L FS + ++ R+++D+ +GR+RGFGFV F N+ A+SA + +
Sbjct: 38 LFVGGLSWSVDEKSLKDAFSSFGDVTEVRIVYDKDSGRARGFGFVIFSNEDAAKSAKDAM 97
Query: 201 TGKWLGSRQIRCNWA 215
GK L R +R N+A
Sbjct: 98 DGKALLGRPLRINFA 112
>IMGA|Medtr3g036670.1 Carbohydrate kinase, PfkB; Nucleotide-binding,
alpha-beta plait chr03_pseudomolecule_IMGAG_V3
9736282-9740531 E EGN_Mt090430 20090702
Length = 453
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 49/77 (63%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
+FVG +S + +L FS Y DAR++ D+++GRS+GFGFV++ ++A SAI L
Sbjct: 52 LFVGGISYNTDEQSLSDAFSKYGQVLDARIIMDRESGRSKGFGFVTYNTVEEASSAIQAL 111
Query: 201 TGKWLGSRQIRCNWATK 217
G+ L R++ N+A +
Sbjct: 112 DGQDLYGRRVGVNFANE 128
>IMGA|Medtr8g136920.1 RNA-binding region RNP-1 (RNA recognition
motif); WW/Rsp5/WWP chr08_pseudomolecule_IMGAG_V3
32720878-32734059 E EGN_Mt090430 20090702
Length = 851
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 56 VYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYG----FIHYYDRRSAALAILSL 111
++VG++ TE ++ +F G V LI+ K+ FI Y A AI +L
Sbjct: 166 LFVGSVPRTATEEDIRPLFEEHGNVVEVALIKDRKTGQHQGCCFIKYATSEEADQAIRAL 225
Query: 112 NGRHLFGQ---PIKVNWAYASGQREDTSG-HFNIFVGDLSPEVTDATLFACFSVYPSCSD 167
+ RH PI+V YA G+RE + +FVG L+ + + + FS Y D
Sbjct: 226 HNRHTLPGGVGPIQVR--YADGERERLGAVEYKLFVGSLNKQASVKEVEEVFSKYGRIED 283
Query: 168 ARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKW 204
+M D + +SRG GFV + ++ A +AIN L G +
Sbjct: 284 VYLMRDDQK-QSRGCGFVKYSHRDMALAAINALNGIY 319
>IMGA|Medtr4g127970.1 RNA-binding region RNP-1 (RNA recognition
motif); Aminoacyl-tRNA synthetase, class I
chr04_pseudomolecule_IMGAG_V3 29951512-29955787 E
EGN_Mt090430 20090702
Length = 401
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 7/170 (4%)
Query: 51 STCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAAL 106
+T R ++V + + T L+ VFSS G ++ +I + + YGF+ Y A L
Sbjct: 73 TTRRKLFVRGLSGETTTETLRTVFSSYGDLDEAIVIFDKATGRSKGYGFVVYRHVDGAVL 132
Query: 107 AILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCS 166
A L + + G+ A A D S +FVG++ EV+ +L + FS Y
Sbjct: 133 A-LKEPSKKIDGRMTVTQLAAAGSTGGDVSSR-KVFVGNVPFEVSAESLLSEFSKYGEIE 190
Query: 167 DARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWAT 216
+ + +D+ +G++RGF F ++ ++ A++++ + + K + Q+ C +A
Sbjct: 191 EGPLGFDKASGKTRGFAFFVYKTEEGAKNSVAE-SMKTVDGHQVICKFAV 239
>IMGA|Medtr4g154870.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 38120198-38118785 E
EGN_Mt090430 20090702
Length = 292
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%)
Query: 140 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 199
++ V +LS + + L F + + S V DQKTG SRGFGFV+F +++DAQ AIN
Sbjct: 212 SVRVTNLSEDTREPDLLELFRPFGAVSRVYVAIDQKTGMSRGFGFVNFVSREDAQRAINK 271
Query: 200 LTGKWLGSRQIRCNWAT 216
L G + +R WAT
Sbjct: 272 LNGYGYDNLILRVEWAT 288
>IMGA|Medtr4g095640.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 19936051-19937060 E
EGN_Mt090430 20090702
Length = 161
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%)
Query: 138 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 197
+ FVG L+ + L FS Y D++++ D++TGRSRGFGFV+F N++ AI
Sbjct: 5 EYRCFVGGLAWATDNEALEKAFSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAI 64
Query: 198 NDLTGKWLGSRQIRCNWA 215
+ G+ L R I N A
Sbjct: 65 EAMNGQDLDGRNITVNQA 82
>IMGA|Medtr3g105170.2 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 26247518-26245658 F
EGN_Mt090430 20090702
Length = 105
Score = 58.9 bits (141), Expect = 4e-09, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 41/58 (70%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIN 198
+F+G LS V D +L F+ Y +ARV+ D++TGRSRGFGFV+F +++ A SA++
Sbjct: 38 LFIGGLSYNVDDQSLRDAFTTYGDVVEARVITDRETGRSRGFGFVNFTSEESATSALS 95
>IMGA|Medtr3g031110.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 8665186-8667027 F
EGN_Mt090430 20090702
Length = 128
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 104 AALAILSLNGRHLFGQPIKVNWA----------YASGQREDTSGHFNIFVGDLSPEVTDA 153
A A LNG + G+ IKVN +G+ + ++VG+L+ VT
Sbjct: 7 ANAAAEKLNGTEIGGREIKVNITEKPLTTEGLPVQAGESTFVDSPYKVYVGNLAKNVTSD 66
Query: 154 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 213
+L FS + A+V T +S GFGFV+F + +D ++AI+ L ++IR N
Sbjct: 67 SLKKFFSEKGNALSAKVSRAPGTSKSSGFGFVTFSSDEDVEAAISSFNNALLEGQKIRVN 126
Query: 214 WA 215
A
Sbjct: 127 KA 128
>IMGA|Medtr1g149790.2 Calcium-binding EF-hand; Nucleotide-binding,
alpha-beta plait chr01_pseudomolecule_IMGAG_V3
33134581-33131894 E EGN_Mt090430 20090702
Length = 156
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 10/123 (8%)
Query: 104 AALAILSLNGRHLFGQPIKVNWAYAS--GQREDTSGHF--------NIFVGDLSPEVTDA 153
A AI +G + G+ IKVN+ G+R + I+ G+L ++T
Sbjct: 7 AEEAIRMFDGTTVGGRAIKVNFPEVPIVGKRVQMGSTYRGYVDSPHKIYAGNLGWDMTSQ 66
Query: 154 TLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCN 213
L F+ P A+V++++ G+SRG+GFVSF +D + A++ + G + R +R
Sbjct: 67 YLRKAFAKQPGLLSAKVVYERNNGKSRGYGFVSFETAEDVEVALSAMNGVEVQGRPLRLK 126
Query: 214 WAT 216
A
Sbjct: 127 LAV 129
>IMGA|Medtr5g047590.1 Nucleotide-binding, alpha-beta plait
chr05_pseudomolecule_IMGAG_V3 20093600-20096443 F
EGN_Mt090430 20090702
Length = 170
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 44/75 (58%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
++VG L+ EV ++ L A F + D + DQ T + R FGFV+F ++DA +A++++
Sbjct: 12 LYVGGLAEEVNESILHAAFIPFGDIKDVKTPLDQATQKHRSFGFVTFLEREDASAAMDNM 71
Query: 201 TGKWLGSRQIRCNWA 215
G L R + N+A
Sbjct: 72 DGAELYGRVLTVNYA 86
>IMGA|Medtr7g104960.2 Nucleotide-binding, alpha-beta plait
chr07_pseudomolecule_IMGAG_V3 23940509-23935426 E
EGN_Mt090430 20090702
Length = 445
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 138 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 197
H IFV L + T ATL FS Y D + + D+ +G+S+G+GF+ F+ + A++A+
Sbjct: 85 HRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARNAL 144
Query: 198 NDLTGKWLGSRQIRCNWATKG 218
+ K +G+R C A+ G
Sbjct: 145 KEPQ-KKIGNRMTACQLASIG 164
>IMGA|Medtr4g095700.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 19963139-19964257 E
EGN_Mt090430 20090702
Length = 190
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%)
Query: 138 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 197
+ FVG L+ L FS + +D++V+ D++TGRSRGFGFV+F ++ + AI
Sbjct: 7 EYRCFVGGLAWATDSQALEQAFSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAI 66
Query: 198 NDLTGKWLGSRQIRCNWA 215
++ G+ + R I N A
Sbjct: 67 EEMNGQDIDGRNITVNEA 84
>IMGA|Medtr7g104960.1 Nucleotide-binding, alpha-beta plait
chr07_pseudomolecule_IMGAG_V3 23940509-23935426 E
EGN_Mt090430 20090702
Length = 451
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 136 SGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQS 195
+ H IFV L + T ATL FS Y D + + D+ +G+S+G+GF+ F+ + A++
Sbjct: 83 ASHRKIFVHGLGWDTTSATLINAFSQYGEIEDCKAVTDKVSGKSKGYGFILFKRRSGARN 142
Query: 196 AINDLTGKWLGSRQIRCNWATKG 218
A+ + K +G+R C A+ G
Sbjct: 143 ALKE-PQKKIGNRMTACQLASIG 164
>IMGA|Medtr4g095740.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 19980347-19981422 E
EGN_Mt090430 20090702
Length = 164
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 44/78 (56%)
Query: 138 HFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI 197
+ FVG L+ L FS Y D++++ D++TGRSRGFGFV+F +++ + AI
Sbjct: 7 EYRCFVGGLAWATDSEALEKAFSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAI 66
Query: 198 NDLTGKWLGSRQIRCNWA 215
+ G+ + R I N A
Sbjct: 67 EGMNGQDMDGRNITVNEA 84
>IMGA|Medtr2g008300.1 Zinc finger, CCHC-type; Nucleotide-binding,
alpha-beta plait chr02_pseudomolecule_IMGAG_V3
1495121-1498384 E EGN_Mt090430 20090702
Length = 334
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 131 QREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQ 190
Q DT F F+G L+ +D L F Y +A+V+ D+ +GRSRGFGFV+F ++
Sbjct: 65 QMSDTD-EFRCFIGGLAWSTSDRRLKDAFEKYGKLVEAKVVVDKFSGRSRGFGFVTFDDK 123
Query: 191 QDAQSAINDLTGKWLGSRQIRCNWA 215
+ + AI + G L R I + A
Sbjct: 124 EAMEEAIEAMNGIDLDGRTITVDKA 148
>IMGA|Medtr1g093820.1 RNA-binding region RNP-1 (RNA recognition
motif) chr01_pseudomolecule_IMGAG_V3 19226322-19217124 E
EGN_Mt090430 20090702
Length = 962
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 73/171 (42%), Gaps = 19/171 (11%)
Query: 55 SVYVGNIHTQVTE---------PLLQEVFSSTGLV-EGCKLIRKEKSSYGFIHYYDRRSA 104
S ++H Q E PL + GL+ EGC + + Y +SA
Sbjct: 197 SAMAEDVHRQAREIGTVCSIKHPLSRNDLQQHGLLQEGCTF------NASAVLYTSVKSA 250
Query: 105 ALAILSLNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPS 164
++ +L+ + + G + WA G + + + V +L + + + FS +
Sbjct: 251 RASVATLHKKEIGGGTV---WARQLGGEGAKTQKWKLIVRNLPFKAKENEIRDAFSSAGT 307
Query: 165 CSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNWA 215
+ + TG S+GF FV F +QDA++AI L G GSR I +WA
Sbjct: 308 VWEVFIPQKSDTGLSKGFAFVKFTCKQDAENAIRKLNGSKFGSRLIAVDWA 358
>IMGA|Medtr4g041420.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 9812122-9803521 E
EGN_Mt090430 20090702
Length = 272
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 129 SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR 188
+GQ DT+ + +FVG L+ E T+ F + +A V+ D+ TGRS+G+GFV+FR
Sbjct: 7 AGQFGDTT-YTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFR 65
Query: 189 NQQDAQSAINDLTGKWLGSRQIRCNWATKG 218
A A D + R+ CN A+ G
Sbjct: 66 EPDAAMRACVD-AAPIIDGRRANCNLASLG 94
>IMGA|Medtr3g159840.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 41938986-41943869 E
EGN_Mt090430 20090702
Length = 385
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 134 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 193
DT+ + +FVG L+ E T+ F + +A V+ D+ TGRS+G+GFV+FR+ + A
Sbjct: 25 DTT-YTKVFVGGLAWETQSETMRRYFEQFGDILEAVVITDKNTGRSKGYGFVTFRDPEAA 83
Query: 194 QSAINDLTGKWLGSRQIRCNWATKG 218
+ A D + + R+ CN A+ G
Sbjct: 84 RRACADPS-PVIDGRRANCNLASHG 107
>IMGA|Medtr4g041420.2 Nucleotide-binding, alpha-beta plait
chr04_pseudomolecule_IMGAG_V3 9812122-9803521 E
EGN_Mt090430 20090702
Length = 267
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 129 SGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFR 188
+GQ DT+ + +FVG L+ E T+ F + +A V+ D+ TGRS+G+GFV+FR
Sbjct: 7 AGQFGDTT-YTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYGFVTFR 65
Query: 189 NQQDAQSAINDLTGKWLGSRQIRCNWATKG 218
A A D + R+ CN A+ G
Sbjct: 66 EPDAAMRACVD-AAPIIDGRRANCNLASLG 94
>IMGA|Medtr5g078930.2 Nucleotide-binding, alpha-beta plait
chr05_pseudomolecule_IMGAG_V3 29267432-29265562 E
EGN_Mt090430 20090702
Length = 140
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 134 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 193
D + +++ V +++ T LF F Y D + D++TG SRGF FV ++ +A
Sbjct: 11 DIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEA 70
Query: 194 QSAINDLTGKWLGSRQIRCNWATKG 218
A++ L G+ + R+I +A G
Sbjct: 71 SKAVDRLDGRMVDGREITVQFAKYG 95
>IMGA|Medtr5g105300.1 Nucleotide-binding, alpha-beta plait
chr05_pseudomolecule_IMGAG_V3 42290661-42295471 E
EGN_Mt090430 20090702
Length = 479
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 85/180 (47%), Gaps = 31/180 (17%)
Query: 51 STCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAAL 106
S +++G I E L+E FS+ G V+ +++ + +GF+ + D A+
Sbjct: 3 SDSGKLFIGGISWDTNEERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVFID---PAV 59
Query: 107 AILSLNGRH-LFGQPIKVNWAYASGQRED------TSGHFN----------IFVGDLSPE 149
A + + +H + G+ ++ A R+D TSG + IFVG L+
Sbjct: 60 ADIVVQEKHNIDGRMVEAKKAVP---RDDQNVLSRTSGSIHGSPGPGRTRKIFVGGLAST 116
Query: 150 VTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI----NDLTGKWL 205
VT++ F + + +D VM+D T R RGFGF+++ +++ + ++L GK +
Sbjct: 117 VTESDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKTFHELNGKMV 176
>IMGA|Medtr2g030270.1 Nucleotide-binding, alpha-beta plait
chr02_pseudomolecule_IMGAG_V3 8352616-8348567 E
EGN_Mt090430 20090702
Length = 522
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 90/190 (47%), Gaps = 37/190 (19%)
Query: 48 FDPSTCR------SVYVGNIHTQVTEPLLQEVFSSTG-LVEGCKLIRKEKSS-----YGF 95
F STCR +++G I E L++ F + G +VE +I K++++ +GF
Sbjct: 33 FFQSTCRVEMDPGKLFIGGISWDTNEDRLRQYFQNFGDVVEA--VIMKDRTTGRARGFGF 90
Query: 96 IHYYDRRSAALAILSLNGRHLF-GQPIKVNWAYASGQ-----REDTSGHFN--------- 140
+ + D A ++ +H+ G+ ++ A R ++S H +
Sbjct: 91 VVFADPSVAERVVME---KHVIDGRTVEAKKAVPRDDQNVFTRSNSSSHGSPAPTPIRTK 147
Query: 141 -IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI-- 197
IFVG L+ VT++ F + + +D VM+D T R RGFGF+++ +++ + +
Sbjct: 148 KIFVGGLASTVTESDFKNYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLHK 207
Query: 198 --NDLTGKWL 205
++L GK +
Sbjct: 208 TFHELNGKMV 217
>IMGA|CU179634_3.1 RNA-binding region RNP-1 (RNA recognition motif)
CU179634.6 7913-3383 H EGN_Mt090430 20090702
Length = 324
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 140 NIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAIND 199
+FVG L+ E TL F + +A V+ D+ TGRS+G+GFV+FR+ + + A D
Sbjct: 35 KVFVGGLAWETQSDTLRRFFEQFGEILEAVVITDKNTGRSKGYGFVTFRDPESTRRACAD 94
Query: 200 LTGKWLGSRQIRCNWATKG 218
+ R+ CN A+ G
Sbjct: 95 -PAPIIDGRRANCNLASLG 112
>IMGA|Medtr5g078930.1 Nucleotide-binding, alpha-beta plait
chr05_pseudomolecule_IMGAG_V3 29267432-29263849 E
EGN_Mt090430 20090702
Length = 267
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 134 DTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDA 193
D + +++ V +++ T LF F Y D + D++TG SRGF FV ++ +A
Sbjct: 11 DIADTYSLLVLNITFRTTADDLFPLFDKYGKVVDIFIPRDRRTGESRGFAFVRYKYADEA 70
Query: 194 QSAINDLTGKWLGSRQIRCNWATKG 218
A++ L G+ + R+I +A G
Sbjct: 71 SKAVDRLDGRMVDGREITVQFAKYG 95
>IMGA|Medtr4g092490.1 RNA-binding region RNP-1 (RNA recognition
motif); SPOC chr04_pseudomolecule_IMGAG_V3
19334351-19327591 E EGN_Mt090430 20090702
Length = 973
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 51 STCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSSYGFIHYYDRRSAALAILS 110
+ ++YV N+ VT+ L ++F G ++ + +Y F+ + A A +
Sbjct: 24 TPSNNLYVANLSPDVTDSDLMDLFVQYGALD--SVTSYSARNYAFVFFKRIDDAKAAKNA 81
Query: 111 LNGRHLFGQPIKVNWAYASGQREDTSGHFNIFVGDLSPEVTDATLFACFSVYPSCSDARV 170
L G + G +++ +A + + ++VG +SP VT L A F + D +
Sbjct: 82 LQGFNFRGNSLRIEFARPAKTCKQ------LWVGGISPAVTKEDLEADFRKFGKVEDFKF 135
Query: 171 MWDQKTGRSRGFGFVSFRNQQDAQSAINDLTGKWLGSRQIRCNW 214
D+ T V F N DA A+ + GK +G IR ++
Sbjct: 136 FRDRNT------ACVEFFNLDDAIQAMKIMNGKHIGGENIRVDF 173
>IMGA|Medtr3g076980.1 Nucleotide-binding, alpha-beta plait
chr03_pseudomolecule_IMGAG_V3 18015649-18011383 E
EGN_Mt090430 20090702
Length = 512
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 77/174 (44%), Gaps = 19/174 (10%)
Query: 51 STCRSVYVGNIHTQVTEPLLQEVFSSTGLVEGCKLIRKEKSS----YGFIHYYDRRSAAL 106
S +++G I E L+E F++ G V ++R + +GF+ + D A
Sbjct: 34 SDLGKLFIGGISWDTDEERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAER 93
Query: 107 AILS---LNGRHLFGQPI-------KVNWAYASGQREDTSGHFN-IFVGDLSPEVTDATL 155
I+ ++GR + + +N S Q G IFVG L +T++
Sbjct: 94 VIIDKHIIDGRTVEAKKAVPRDDQQNINRQTGSVQGSPGPGRTKKIFVGGLPSTITESDF 153
Query: 156 FACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAI----NDLTGKWL 205
F + + +D VM+D T R RGFGF+++ +++ + ++L GK +
Sbjct: 154 KMYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFHELNGKMV 207
>IMGA|Medtr4g078600.1 RNA-binding region RNP-1 (RNA recognition
motif) chr04_pseudomolecule_IMGAG_V3 15432850-15431831 E
EGN_Mt090430 20090702
Length = 112
Score = 49.7 bits (117), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/78 (30%), Positives = 43/78 (55%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
+F+ LS + L F + + +V+ + +TG S+G+GFV F ++ A +A +L
Sbjct: 35 LFIAGLSYNTNETVLRDTFEQHGQIIEVKVICNHRTGESKGYGFVRFNSETAAATARKEL 94
Query: 201 TGKWLGSRQIRCNWATKG 218
G+ + R+IR +A KG
Sbjct: 95 HGQIVDGRRIRVGYAHKG 112
>IMGA|Medtr5g078580.1 RNA-binding region RNP-1 (RNA recognition
motif) chr05_pseudomolecule_IMGAG_V3 29128664-29124287 E
EGN_Mt090430 20090702
Length = 393
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 43/73 (58%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
+FVG + + T+ + A F+ Y D ++ D+ TG+S+GF F+++ +Q+ A+++L
Sbjct: 38 VFVGGIPFDFTEGDVIAVFAQYGEVVDINLVRDKGTGKSKGFAFIAYEDQRSTNLAVDNL 97
Query: 201 TGKWLGSRQIRCN 213
G + R IR +
Sbjct: 98 NGAQVSGRIIRVD 110
>IMGA|Medtr8g118890.1 RNA-binding region RNP-1 (RNA recognition
motif) chr08_pseudomolecule_IMGAG_V3 26833327-26828157 E
EGN_Mt090430 20090702
Length = 555
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 2/81 (2%)
Query: 141 IFVGDLSPEVTDATLFACFSVYPSCSDARVMWDQKTGRSRGFGFVSFRNQQDAQSAINDL 200
I+VG L TD T+ F++Y + D +++ DQ+T + + FV+F N + A AIND+
Sbjct: 9 IYVGGLPYGATDETIRTVFNLYGAILDVKIINDQRTI-GKCYCFVTFTNPRSAIDAINDM 67
Query: 201 TGKWLGSRQIRCNWA-TKGAG 220
G+ + R ++ N ++G G
Sbjct: 68 NGRTINGRVVKVNGVKSRGGG 88