Jatropha Genome Database

JcCA0028741.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0028741.30 + phase: 0 
         (357 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g104240.1 Protein of unknown function DUF341 chr07_ps...   357   4e-99
IMGA|Medtr5g074690.1 hypothetical protein chr05_pseudomolecule_I...   221   4e-58
IMGA|Medtr5g034080.1 Protein of unknown function DUF341 chr05_ps...   202   3e-52
IMGA|Medtr5g074690.2 hypothetical protein chr05_pseudomolecule_I...    89   3e-18

>IMGA|Medtr7g104240.1 Protein of unknown function DUF341
           chr07_pseudomolecule_IMGAG_V3 23587380-23589417 E
           EGN_Mt090430 20090702
          Length = 257

 Score =  357 bits (917), Expect = 4e-99,   Method: Compositional matrix adjust.
 Identities = 159/204 (77%), Positives = 183/204 (89%)

Query: 1   MKILCLHGFRTSGSFLQKQISKWDPSILAHFDLDFPNGIFPAGGKSDIDGIFPPPYFEWF 60
           +KILCLHGFRTSGSF++KQISKWDPSI + F L+FP+G FPAGGKSDI+GIFPPPYFEWF
Sbjct: 9   LKILCLHGFRTSGSFIKKQISKWDPSIFSQFHLEFPDGKFPAGGKSDIEGIFPPPYFEWF 68

Query: 61  QYNQDFTEYTNLDKCISYLCEYITTKGPFDGLLGFSQGATLSALLLGYQLQGKVLKEHPP 120
           Q+++DFT YTNLD+CISYL EYI   GPFDG LGFSQGATLSALL+GYQ QGK+LKEHPP
Sbjct: 69  QFDKDFTVYTNLDECISYLTEYIIANGPFDGFLGFSQGATLSALLIGYQAQGKLLKEHPP 128

Query: 121 MKLFISISGTKFRDPSICDIAYKDIMKIKSVHFIGAKDWLRLPSEELATAFDSPLIIRHP 180
           +K  +SISG+KFRDPSICD+AYKD +K KSVHFIG KDWL++PSEELA+AFD PLIIRHP
Sbjct: 129 IKFLVSISGSKFRDPSICDVAYKDPIKAKSVHFIGEKDWLKIPSEELASAFDKPLIIRHP 188

Query: 181 QGHTVPRLDEAAIEQLRGWVAEIL 204
           QGHTVPRLDE +  QL+ +VAEIL
Sbjct: 189 QGHTVPRLDEVSTGQLQNFVAEIL 212


>IMGA|Medtr5g074690.1 hypothetical protein
           chr05_pseudomolecule_IMGAG_V3 26999850-27001442 F
           EGN_Mt090430 20090702
          Length = 227

 Score =  221 bits (563), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 100/202 (49%), Positives = 138/202 (68%)

Query: 2   KILCLHGFRTSGSFLQKQISKWDPSILAHFDLDFPNGIFPAGGKSDIDGIFPPPYFEWFQ 61
           +ILCLHGFRTSG  ++KQI KW  ++L   DL F +  FP  GKSD++GIF PPY+EWFQ
Sbjct: 11  RILCLHGFRTSGEIMKKQIHKWPQNVLDKLDLVFVDAPFPCNGKSDVEGIFDPPYYEWFQ 70

Query: 62  YNQDFTEYTNLDKCISYLCEYITTKGPFDGLLGFSQGATLSALLLGYQLQGKVLKEHPPM 121
           +N++FTEYTN D+C+ Y+ +Y+   GPFDGLLGFSQGA LS  L G Q +G  L + P +
Sbjct: 71  FNKEFTEYTNFDECLQYIEDYMIKHGPFDGLLGFSQGAILSGGLPGLQEKGVALTKVPKV 130

Query: 122 KLFISISGTKFRDPSICDIAYKDIMKIKSVHFIGAKDWLRLPSEELATAFDSPLIIRHPQ 181
           K  I I G KFR PS+ + AY   +   S+HF+G  D+L+   +EL  +   P++I HP+
Sbjct: 131 KFLIIIGGAKFRAPSVVEKAYSSQIGCPSLHFLGEHDFLKEYGKELIDSCVEPVVIHHPK 190

Query: 182 GHTVPRLDEAAIEQLRGWVAEI 203
           GHTVPRLD+ ++  +  ++  I
Sbjct: 191 GHTVPRLDDKSLNTMMSFIERI 212


>IMGA|Medtr5g034080.1 Protein of unknown function DUF341
           chr05_pseudomolecule_IMGAG_V3 13948935-13946850 E
           EGN_Mt090430 20090702
          Length = 227

 Score =  202 bits (513), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 97/207 (46%), Positives = 135/207 (65%), Gaps = 5/207 (2%)

Query: 2   KILCLHGFRTSGSFLQKQISKWDPSILAHFDLDFPNGIFPAGGKSDIDGIFPPPYFEWFQ 61
           KILCLHGFRTSG  L+K + +W  +++   DL F +G FPA GKSD++GIF PPY+EWFQ
Sbjct: 10  KILCLHGFRTSGEILKKLVLRWPETVIQKLDLVFLDGPFPAQGKSDVEGIFDPPYYEWFQ 69

Query: 62  YNQDFTEYTNLDKCISYLCEYITTKGPFDGLLGFSQGATLSALLLGYQLQGKVLKEHPPM 121
            N+ FTEY N ++C++Y+ +Y+   GPFDG+LGFSQGA L+A L G Q QG  L++   +
Sbjct: 70  SNEGFTEYRNFEECLAYIEDYMLKNGPFDGVLGFSQGAFLAAALPGMQAQGAALQKISKI 129

Query: 122 KLFISISGTKF-----RDPSICDIAYKDIMKIKSVHFIGAKDWLRLPSEELATAFDSPLI 176
           K  I ISG KF       P +   A+   +   S+H IG  D+L+  S  L   F  P++
Sbjct: 130 KFLILISGAKFGGMNYGTPKLASNAFSKPIDCPSLHIIGDMDFLKPESIILREGFVDPVV 189

Query: 177 IRHPQGHTVPRLDEAAIEQLRGWVAEI 203
           I HP+GHT+PRLDE ++  + G++  I
Sbjct: 190 IHHPKGHTIPRLDEKSLPTMLGFINTI 216


>IMGA|Medtr5g074690.2 hypothetical protein
          chr05_pseudomolecule_IMGAG_V3 26999850-27001442 F
          EGN_Mt090430 20090702
          Length = 85

 Score = 89.0 bits (219), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/63 (58%), Positives = 48/63 (76%)

Query: 2  KILCLHGFRTSGSFLQKQISKWDPSILAHFDLDFPNGIFPAGGKSDIDGIFPPPYFEWFQ 61
          +ILCLHGFRTSG  ++KQI KW  ++L   DL F +  FP  GKSD++GIF PPY+EWFQ
Sbjct: 11 RILCLHGFRTSGEIMKKQIHKWPQNVLDKLDLVFVDAPFPCNGKSDVEGIFDPPYYEWFQ 70

Query: 62 YNQ 64
          +N+
Sbjct: 71 FNK 73