Jatropha Genome Database
- JcCA0028681.20
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0028681.20 + phase: 0 /TE/partial
(1035 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse transc... 691 0.0
IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse transc... 428 e-120
IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse transc... 379 e-105
IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse transc... 373 e-103
IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse transc... 347 2e-95
IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse transcri... 343 2e-94
IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse transc... 335 8e-92
IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse transc... 296 3e-80
IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse transc... 288 1e-77
IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse transc... 271 1e-72
IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H... 247 2e-65
IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse transc... 246 3e-65
IMGA|Medtr8g024620.1 hypothetical protein chr08_pseudomolecule_I... 243 3e-64
IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase... 241 2e-63
IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse transc... 239 7e-63
IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase... 223 5e-58
IMGA|AC225611_8.1 contains similarity to reverse trancriptase, r... 216 5e-56
IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse transc... 215 1e-55
IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse transc... 214 1e-55
IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse transc... 211 2e-54
IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse transc... 209 4e-54
IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse transc... 208 9e-54
IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse transcri... 204 2e-52
IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse transcri... 202 9e-52
IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse transc... 201 1e-51
IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse transc... 196 4e-50
IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse transc... 181 2e-45
IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H... 177 3e-44
IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse transc... 170 3e-42
IMGA|AC235669_13.1 RNA-directed DNA polymerase (Reverse transcri... 169 5e-42
IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse transc... 169 6e-42
IMGA|Medtr8g037100.1 hypothetical protein chr08_pseudomolecule_I... 169 8e-42
IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse transc... 167 3e-41
IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse transc... 163 5e-40
IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse transc... 163 5e-40
IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse transc... 162 7e-40
IMGA|Medtr8g105650.1 reverse transcriptase, putative; 100033-105... 157 3e-38
IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse transc... 155 7e-38
IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse transc... 152 8e-37
IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse transc... 147 2e-35
IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putat... 145 8e-35
IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750, ... 144 2e-34
IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase... 143 4e-34
IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse transc... 142 6e-34
IMGA|Medtr5g009520.1 RNA-directed DNA polymerase (reverse transc... 140 4e-33
IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse transc... 139 6e-33
IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse transc... 137 2e-32
IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase chr04_... 136 6e-32
IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H... 135 9e-32
IMGA|Medtr1g117580.1 hypothetical protein chr01_pseudomolecule_I... 126 4e-29
IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750, ... 122 8e-28
IMGA|Medtr2g114260.1 hypothetical protein chr02_pseudomolecule_I... 122 9e-28
IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse transc... 114 2e-25
IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse transc... 109 7e-24
IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse transc... 107 2e-23
IMGA|Medtr6g061920.1 RNA-directed DNA polymerase (Reverse transc... 106 7e-23
IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.... 105 8e-23
IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V... 104 2e-22
IMGA|AC233676_33.1 RNA-directed DNA polymerase (reverse transcri... 103 4e-22
IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse transc... 103 6e-22
IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase... 100 4e-21
IMGA|Medtr4g013050.1 hypothetical protein chr04_pseudomolecule_I... 100 7e-21
IMGA|Medtr4g012970.1 hypothetical protein chr04_pseudomolecule_I... 100 7e-21
IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V... 99 1e-20
IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse transcrip... 98 3e-20
IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse transc... 97 4e-20
IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase... 97 4e-20
IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse transc... 97 5e-20
IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease ... 97 5e-20
IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V... 97 5e-20
IMGA|Medtr5g037770.1 RNA-directed DNA polymerase (Reverse transc... 96 7e-20
IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse transc... 95 2e-19
IMGA|AC233668_29.1 RNA-directed DNA polymerase (reverse transcri... 94 4e-19
IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse transc... 93 5e-19
IMGA|Medtr7g068050.1 hypothetical protein chr07_pseudomolecule_I... 93 7e-19
IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse transc... 92 1e-18
IMGA|CU179634_33.1 RNA-directed DNA polymerase (Reverse transcri... 91 2e-18
IMGA|Medtr6g070340.1 Endonuclease/exonuclease/phosphatase, putat... 91 4e-18
IMGA|Medtr7g084960.1 RNA-directed DNA polymerase (reverse transc... 90 6e-18
IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3 220... 89 1e-17
IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse transc... 87 3e-17
IMGA|Medtr6g024980.1 Putative ribonuclease H protein At1g65750, ... 86 9e-17
IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putat... 86 1e-16
IMGA|Medtr4g084240.1 Polynucleotidyl transferase, Ribonuclease H... 86 1e-16
IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse transc... 85 1e-16
IMGA|Medtr1g009630.1 RNA-directed DNA polymerase, related chr01_... 85 1e-16
IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H... 85 2e-16
IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial chr... 85 2e-16
IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase... 84 3e-16
IMGA|Medtr3g103220.1 RNA-directed DNA polymerase (reverse transc... 84 4e-16
IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse transc... 83 7e-16
IMGA|AC233668_7.1 RNA-directed DNA polymerase (Reverse transcrip... 80 8e-15
IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt0904... 79 8e-15
IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt09043... 79 8e-15
IMGA|Medtr3g162890.1 RNA-directed DNA polymerase (reverse transc... 77 4e-14
IMGA|Medtr3g039900.1 RNA-directed DNA polymerase (Reverse transc... 77 6e-14
IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H... 76 8e-14
IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fo... 75 1e-13
IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 75 1e-13
IMGA|Medtr3g043440.1 Polynucleotidyl transferase, Ribonuclease H... 75 1e-13
IMGA|Medtr4g109120.1 RNA-directed DNA polymerase (Reverse transc... 75 2e-13
IMGA|Medtr5g068610.1 Polynucleotidyl transferase, Ribonuclease H... 75 2e-13
IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse transc... 73 6e-13
IMGA|Medtr7g068430.1 RNA-directed DNA polymerase (reverse transc... 73 6e-13
IMGA|Medtr8g133770.1 hypothetical protein chr08_pseudomolecule_I... 72 2e-12
IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse transc... 72 2e-12
IMGA|Medtr3g010370.1 RNA-directed DNA polymerase (reverse transc... 71 2e-12
IMGA|Medtr7g089950.1 hypothetical protein chr07_pseudomolecule_I... 71 3e-12
IMGA|Medtr1g140870.1 Polynucleotidyl transferase, Ribonuclease H... 71 3e-12
IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H... 70 4e-12
IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H... 70 5e-12
IMGA|Medtr1g087030.1 RNA-directed DNA polymerase (Reverse transc... 70 5e-12
IMGA|Medtr1g016440.1 probable reverse transcriptase At2g02650 -,... 70 5e-12
IMGA|Medtr1g016370.1 probable reverse transcriptase At2g02650 -,... 70 5e-12
IMGA|Medtr3g030620.1 RNA-directed DNA polymerase (reverse transc... 70 6e-12
IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 69 9e-12
IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse transc... 69 1e-11
IMGA|Medtr1g089700.1 reverse transcriptase, putative; 16838-2026... 69 1e-11
IMGA|Medtr4g107070.1 Polynucleotidyl transferase, Ribonuclease H... 69 1e-11
IMGA|Medtr4g032720.1 RNA-directed DNA polymerase, related chr04_... 69 2e-11
IMGA|Medtr4g114300.1 Hemopexin, related, related chr04_pseudomol... 67 3e-11
IMGA|AC233571_22.1 hypothetical protein AC233571.2 95791-97088 H... 67 5e-11
IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse transc... 67 6e-11
IMGA|Medtr2g122180.1 RNA-directed DNA polymerase (reverse transc... 66 7e-11
IMGA|Medtr1g149770.1 contains similarity to reverse trancriptase... 66 8e-11
IMGA|Medtr4g160710.1 RNA-directed DNA polymerase, related, putat... 66 1e-10
IMGA|Medtr5g025230.1 RNA-directed DNA polymerase (reverse transc... 65 1e-10
IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse transcrip... 65 1e-10
IMGA|Medtr3g024820.1 RNA-directed DNA polymerase (reverse transc... 65 2e-10
IMGA|Medtr1g071160.1 RNA-directed DNA polymerase, putative chr01... 64 3e-10
IMGA|Medtr2g010180.1 RNA-directed DNA polymerase (reverse transc... 64 4e-10
IMGA|Medtr5g084580.1 RNA-directed DNA polymerase (reverse transc... 64 4e-10
IMGA|Medtr1g008260.1 RNA-directed DNA polymerase, putative chr01... 64 4e-10
IMGA|Medtr5g105670.1 Polynucleotidyl transferase, Ribonuclease H... 63 7e-10
IMGA|Medtr2g049360.1 RNA-directed DNA polymerase (reverse transc... 62 1e-09
IMGA|Medtr8g087490.1 RNA-directed DNA polymerase, putative chr08... 62 1e-09
IMGA|Medtr2g111150.1 probable reverse transcriptase At2g02650 -,... 62 2e-09
IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase... 61 2e-09
IMGA|AC235675_13.1 RNA-directed DNA polymerase (reverse transcri... 61 3e-09
IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse transc... 60 5e-09
IMGA|Medtr4g157980.1 contains similarity to reverse trancriptase... 60 5e-09
IMGA|Medtr2g114250.1 RNA-directed DNA polymerase (reverse transc... 60 8e-09
IMGA|Medtr2g085670.1 Endonuclease/exonuclease/phosphatase chr02_... 59 8e-09
IMGA|Medtr3g030650.1 RNA-directed DNA polymerase (reverse transc... 59 1e-08
IMGA|Medtr5g086160.1 RNA-directed DNA polymerase (reverse transc... 59 1e-08
IMGA|Medtr3g106940.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V... 58 2e-08
IMGA|Medtr8g109700.1 RNA-directed DNA polymerase (Reverse transc... 58 2e-08
IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, relat... 58 3e-08
IMGA|Medtr2g005350.1 RNA-directed DNA polymerase (reverse transc... 58 3e-08
IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related chr08_... 57 3e-08
IMGA|Medtr2g055530.1 hypothetical protein chr02_pseudomolecule_I... 57 4e-08
IMGA|Medtr8g006140.1 Polynucleotidyl transferase, Ribonuclease H... 57 4e-08
IMGA|Medtr8g005870.1 Polynucleotidyl transferase, Ribonuclease H... 57 4e-08
IMGA|Medtr7g077740.1 RNA-directed DNA polymerase (reverse transc... 57 4e-08
IMGA|Medtr3g076330.1 RNA-directed DNA polymerase (reverse transc... 57 5e-08
IMGA|AC235488_20.1 RNA-directed DNA polymerase (reverse transcri... 57 6e-08
IMGA|AC235488_13.1 RNA-directed DNA polymerase (reverse transcri... 57 6e-08
IMGA|AC235488_29.1 RNA-directed DNA polymerase (reverse transcri... 57 6e-08
IMGA|Medtr6g009380.1 hypothetical protein chr06_pseudomolecule_I... 56 8e-08
IMGA|Medtr5g022410.1 Leucine-rich repeat chr05_pseudomolecule_IM... 56 9e-08
IMGA|Medtr3g138260.1 RNA-directed DNA polymerase (reverse transc... 55 1e-07
IMGA|Medtr7g080740.1 RNA-directed DNA polymerase (reverse transc... 55 2e-07
IMGA|Medtr3g149300.1 RNA-directed DNA polymerase (reverse transc... 55 2e-07
IMGA|Medtr3g025270.1 RNA-directed DNA polymerase (reverse transc... 54 3e-07
IMGA|Medtr6g015400.1 probable reverse transcriptase At2g02650 -,... 54 3e-07
IMGA|Medtr3g097880.1 RNA-directed DNA polymerase (reverse transc... 54 4e-07
IMGA|Medtr3g086350.1 N-6 Adenine-specific DNA methylase chr03_ps... 54 4e-07
IMGA|Medtr2g056130.1 hypothetical protein chr02_pseudomolecule_I... 54 4e-07
IMGA|Medtr8g021560.1 hypothetical protein chr08_pseudomolecule_I... 54 4e-07
IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse transc... 54 5e-07
IMGA|Medtr2g129530.1 RNA-directed DNA polymerase (reverse transc... 54 5e-07
IMGA|Medtr8g109710.1 reverse transcriptase - beet retrotransposo... 53 7e-07
IMGA|AC235567_38.1 hypothetical protein AC235567.1 139216-138758... 53 1e-06
IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H... 52 1e-06
IMGA|Medtr6g031250.1 Polynucleotidyl transferase, Ribonuclease H... 52 1e-06
IMGA|Medtr7g040130.1 RNA-directed DNA polymerase (reverse transc... 52 2e-06
IMGA|Medtr7g039930.1 RNA-directed DNA polymerase (reverse transc... 52 2e-06
IMGA|Medtr2g014330.1 hypothetical protein chr02_pseudomolecule_I... 51 2e-06
IMGA|Medtr2g013680.1 hypothetical protein chr02_pseudomolecule_I... 51 2e-06
IMGA|Medtr3g098050.1 RNA-directed DNA polymerase (reverse transc... 51 3e-06
IMGA|Medtr3g013410.1 RNA-directed DNA polymerase (reverse transc... 51 4e-06
IMGA|Medtr5g038940.1 RNA-directed DNA polymerase (reverse transc... 51 4e-06
IMGA|Medtr1g064980.1 RNA-directed DNA polymerase ; Ribonuclease ... 50 4e-06
IMGA|Medtr4g033120.1 Polynucleotidyl transferase, Ribonuclease H... 50 5e-06
IMGA|Medtr4g023500.1 hypothetical protein chr04_pseudomolecule_I... 49 9e-06
>IMGA|Medtr2g117110.1 RNA-directed DNA polymerase (Reverse
transcriptase); Hemopexin; Polynucleotidyl transferase,
Ribonuclease H fold chr02_pseudomolecule_IMGAG_V3
27457173-27452820 H EGN_Mt090430 20090702
Length = 1147
Score = 691 bits (1782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/859 (42%), Positives = 519/859 (60%), Gaps = 67/859 (7%)
Query: 4 SDHAPLFIQLNYRQVDNNYRRFRFDNSWVGERELDQLVKDVWCNNDSEPLLHKRDVCIKE 63
SDH+P+ + + D R+FRF+NSW+ E ELD +V D W ++ +EP++ + C +E
Sbjct: 76 SDHSPILLCTEQKFYDFKKRQFRFENSWLVEPELDSVVHDGWFHDVNEPMITRLQHCTEE 135
Query: 64 MERWGRQFNKIFWKQKRILKQRIENARDGFDDVT----VQRLKNEWNTILFKEECRMRQI 119
+++WGR K + + + K IE + G DV + LK + N +L +E+ +Q
Sbjct: 136 LDQWGRSLRKRYKEDIQKCKDIIEELQ-GLGDVETDGEIVLLKEKLNLLLIQEDTFWKQR 194
Query: 120 GKQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSA 179
K W+ GD N+K+FHA+ +RK++ KI KL N++ + + LN
Sbjct: 195 AKIFWMKDGDMNAKFFHAAATSRKQKNKITKLFNDEDAVAE--------CLN-------- 238
Query: 180 EESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFW 239
EE N L PFT +E +A F MQ DK+PGPDGLNP F+++FW
Sbjct: 239 EED-----------------NQFLIAPFTDEEFRDAIFQMQSDKAPGPDGLNPTFYKRFW 281
Query: 240 HVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKS 299
+ G+++ C++WL G P L DT+IVL+PKCD+P ++++ RPISLCNV+YKI+AK+
Sbjct: 282 TLCGEEVVAACRRWLHEGNLPTALGDTNIVLIPKCDHPRTMRDLRPISLCNVVYKILAKT 341
Query: 300 LANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSRK-NQRGACALKIDISKA 358
LANRL+++L I QS FV GR I+DN+ +A E+IH +K + +G ALKIDISK
Sbjct: 342 LANRLQRVLDKCISVEQSGFVAGRTITDNILIALEIIHYLKCKTWGIKGEAALKIDISKT 401
Query: 359 YDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLS 418
YDRV+W +L +M +MGF W++WM + VT V Y VL+N VGPI PGRGLRQGDPLS
Sbjct: 402 YDRVDWNYLFSIMEKMGFNPIWIKWMRMSVTMVSYHVLVNDDRVGPIYPGRGLRQGDPLS 461
Query: 419 PYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVN 478
PYLF+ CAEG+S L + A+R L GVKV + P+++HLLFADDSF FF + E +
Sbjct: 462 PYLFILCAEGMSTLIKQAERNNILHGVKVCKRAPTVSHLLFADDSFLFFRANENETRALK 521
Query: 479 DILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKS 538
DIL Y A Q IN+ KS I+FS N+ +S +L V+ IG YLGLPS+IG+S
Sbjct: 522 DILDTYANASDQLINMQKSEIYFSRNVPVTKKNTLSNMLWVSEGIGIRKYLGLPSMIGRS 581
Query: 539 KKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQK 598
KK +F +++DR+ RI S++ LS+AGKEVLIKS+AQAIP+YCMSVF +P SI ++K
Sbjct: 582 KKSIFNYIKDRIWNRISGLSSKMLSQAGKEVLIKSVAQAIPSYCMSVFLLPHSIADDIEK 641
Query: 599 RMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDT 658
+N FWWG K GR GI W++WER+ K GG GFR +H F++AM KQ W + PD
Sbjct: 642 MLNSFWWGMKNEGRGGIRWMSWERLTMRKEWGGMGFRHIHGFDLAMSGKQCWNFLTNPDA 701
Query: 659 LFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPW 718
+ S++FKAKYF N +FL A L P+YVWRSI ++ LK G +WR+G+G T +SH
Sbjct: 702 MVSRIFKAKYFTNENFLGASLGHNPSYVWRSIWSSRIFLKTGYQWRIGDGSTTATVSH-- 759
Query: 719 MPLDHSFWVEDSRDFVDPTMKVRELFVEGEGR-WDVGKVMTLFSMREFRAILGIPISINA 777
++ + R W+ + F++R+ IL IP+
Sbjct: 760 -------------------------LIDAQTRSWNEPLIRNNFNLRDVDEILKIPLLHCE 794
Query: 778 SRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRAL 837
D I+W +DKKG+YSV++ Y V +L R G K+W L PK K FMWR
Sbjct: 795 QNDAIIWRFDKKGVYSVKNAYRVCVDVLINRDEWKVEGDRNKLWSLPIPPKVKHFMWRLG 854
Query: 838 RNVLPTKERLRRRGVEVDI 856
R+ LP ++RL +GV + +
Sbjct: 855 RDCLPNRQRLNCKGVRLSL 873
>IMGA|Medtr8g125530.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
29296065-29298854 H EGN_Mt090430 20090702
Length = 693
Score = 428 bits (1101), Expect = e-120, Method: Compositional matrix adjust.
Identities = 249/679 (36%), Positives = 349/679 (51%), Gaps = 133/679 (19%)
Query: 217 FNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDN 276
++M PDK GPDG NP FFQKFW V DI+ +C WL+ FP +L T+I L+PK +
Sbjct: 2 YSMHPDKCLGPDGFNPGFFQKFWSVCNSDIFSECCSWLNNNQFPPSLNSTNIALIPKGNE 61
Query: 277 PLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELI 336
++K++RPI+LCNVLYK+VAK LANRLK IL + + QSAFVPGR I DN +A E+I
Sbjct: 62 QHNMKDWRPIALCNVLYKLVAKVLANRLKNILHKCVSDNQSAFVPGRSILDNAMIAIEVI 121
Query: 337 HNIKSRKNQRGA-CALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSV 395
H++K K R ALK+DISKAYDR++W +L+ +++++G+ +W++W+M+CV V YSV
Sbjct: 122 HHMKISKRLRDKNVALKLDISKAYDRIDWLYLKEVVIKIGYANRWIRWIMMCVESVDYSV 181
Query: 396 LLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSIT 455
++N + VGPI PG GLRQGDPLSPYLF+ CAEGLS L A+RRG + G+ + N P I+
Sbjct: 182 IVNNESVGPIFPGEGLRQGDPLSPYLFILCAEGLSALIHQAERRGDIHGISICTNSPIIS 241
Query: 456 HLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNIST 515
HLLFA+D F FF +E + +IL+ YE+AL L K F NM ++ T
Sbjct: 242 HLLFANDCFLFFMAEEREVGVMKNILETYEKAL-----LVKQLAF--RNMKFIIVGVFPT 294
Query: 516 ILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIA 575
+L L LPSL+ ++ DR+ +I WS++ LS+A +EVL+KS+
Sbjct: 295 LLKT---------LSLPSLVSALLWEL-----DRIWHKINCWSSKCLSKAEREVLMKSVL 340
Query: 576 QAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFR 635
Q+IP+Y MSV+ +P + ++K +N FWWG R+G+HWL+W+R+ K GG GF+
Sbjct: 341 QSIPSYIMSVYLLPNKLVDAIEKIINAFWWGHGGTTRKGLHWLSWKRLSVHKNYGGMGFK 400
Query: 636 DLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMG 695
DL F H AM
Sbjct: 401 DLTSF--------------------------------------------------HVAM- 409
Query: 696 VLKQGVRWRVGNGETIGVLSHPWM----------PLDHSFWVEDSRDFVDPTMKVRELFV 745
GVRWR+G G +I + W+ PL S +D ++P+ K
Sbjct: 410 ---LGVRWRIGYGASIPLFGASWLKDGCSLSTQSPLYASLAHVKVQDIIEPSTKA----- 461
Query: 746 EGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLL 805
+K G YSVRS Y + +
Sbjct: 462 -----------------------------------------EKNGSYSVRSAYRIYVTKI 480
Query: 806 RGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE- 864
H G W +W L PK ++F+W R PT+ RL RG+ CG
Sbjct: 481 ADNSHLHVPGKWSSIWKLKFPPKIRNFVWPVCRGCFPTRARLSSRGIHCPNDFVLCGTNY 540
Query: 865 EDINHAIVLCSKAKGVWRQ 883
ED H ++ A VWR+
Sbjct: 541 EDSIHVLLEYPGAMQVWRE 559
>IMGA|Medtr4g079290.1 RNA-directed DNA polymerase (Reverse
transcriptase); Polynucleotidyl transferase,
Ribonuclease H fold chr04_pseudomolecule_IMGAG_V3
15868030-15871357 E EGN_Mt090430 20090702
Length = 845
Score = 379 bits (972), Expect = e-105, Method: Compositional matrix adjust.
Identities = 209/527 (39%), Positives = 292/527 (55%), Gaps = 75/527 (14%)
Query: 53 LLHKRDVCIKEMERWGRQFNKIFWKQKRILKQRIENARDGF----------DDVTVQRLK 102
++ K +VC ++ W + N LKQ I+N R D + L+
Sbjct: 3 VVEKLEVCANDLNSWSKAHNNG-------LKQEIDNCRRDLNRCQSQGAAADPSLLTNLR 55
Query: 103 NEWNTILFKEECRMRQIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDN 162
++ +E+ RQ K W GD N+K+FHAS +RK+ +I L+N++G + D
Sbjct: 56 KRMTHLMIQEDKYWRQRAKTHWYRDGDLNTKFFHASATSRKKVNRINFLDNDEGVRIADE 115
Query: 163 DSLEQITLNYFSTVYSAEESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPD 222
+ Q+ YF T++ S + N+++ V+ N +LT PF +E +A F+M PD
Sbjct: 116 QGMSQVAKEYFETLFLESNSTRAPVVNIIEKVVSGDDNIMLTAPFQAEEFKDAMFSMHPD 175
Query: 223 KSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKE 282
K PGPDG NP FFQ+ W
Sbjct: 176 KCPGPDGFNPGFFQQLW------------------------------------------- 192
Query: 283 YRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSR 342
PI+LCNVLYK+VAK LANRLKKIL I E QSAFVP R I DN +A E++H++K
Sbjct: 193 --PIALCNVLYKLVAKVLANRLKKILHKCISESQSAFVPERSILDNAMIAIEVVHHMKVG 250
Query: 343 KNQRGA-CALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKE 401
K R ALK+DISKAYDR++W +L+ +ML+MGF KWVQ +M+CV V YSV++N +
Sbjct: 251 KRVRDKNVALKLDISKAYDRIDWLYLKEVMLKMGFDSKWVQQIMMCVETVDYSVIVNNE- 309
Query: 402 VGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFAD 461
GDPLSPYLF+ C EGLS L + A+R G L GV + N P+I+HLLFAD
Sbjct: 310 -----------LGDPLSPYLFILCDEGLSALIRKAERSGDLHGVSICTNAPTISHLLFAD 358
Query: 462 DSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAG 521
D F FF+ EA+ + +IL YE A GQ I+L K +FFS + L I+ IL V
Sbjct: 359 DCFLFFKVDDNEAQVMKNILHTYELASGQTISLPKYEVFFSTVVPLPLKETITNILGVRA 418
Query: 522 SIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKE 568
+G G YLGLPS++G+SK+ FGF++DR+ +I +WS++ LS+ G+E
Sbjct: 419 VMGTGKYLGLPSMVGRSKEATFGFIKDRIWHKINSWSSKCLSKVGRE 465
Score = 102 bits (253), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 83/151 (54%), Gaps = 4/151 (2%)
Query: 642 MAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGV 701
++ + ++GWR E L +LFKA+YF N DF+ + + P+YVWRSI +A V+KQG
Sbjct: 459 LSKVGREGWRFQTESSNLVCRLFKARYFPNSDFIGSKIGHNPSYVWRSIFSAKIVVKQGA 518
Query: 702 RWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVREL-FVEGEGR-WDVGKVMTL 759
RWR+G+G I L PW L ++ + +P M+V+ F+E + + W + +L
Sbjct: 519 RWRIGSGVNIPFLGAPW--LKDGLFLSTTNPIFEPLMQVKLCDFIEQDVKMWKAPLIHSL 576
Query: 760 FSMREFRAILGIPISINASRDQIMWHWDKKG 790
F + IL P+ D+++W +K G
Sbjct: 577 FDAQTAELILNTPLQPLVLEDKMIWKGEKSG 607
>IMGA|Medtr5g088260.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
34193929-34195112 H EGN_Mt090430 20090702
Length = 373
Score = 373 bits (957), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/385 (47%), Positives = 255/385 (66%), Gaps = 23/385 (5%)
Query: 172 YFSTVYSAEESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLN 231
YF ++ A++S + N++ ++ N+ LTTPF ++E EA F+MQ +K PGPDG N
Sbjct: 8 YFDELFRAKQSTRDPVINVINKVISEEDNHQLTTPFLIEEFKEAMFSMQAEKCPGPDGFN 67
Query: 232 PAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNV 291
P F+Q FW + DI+R+C WL++G P +L T+I L+PK ++K++RPI+LC+V
Sbjct: 68 PGFYQHFWQLCSPDIFRECCSWLESGQLPASLNSTNIALIPKGSEQRTMKDWRPIALCDV 127
Query: 292 LYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSR-KNQRGACA 350
YK+V+K LANRLKKIL I + QSAFVPGR I DN VA E++H +KS+ K ++G A
Sbjct: 128 FYKVVSKVLANRLKKILHKCILDNQSAFVPGRPILDNAMVAIEVVHYMKSKTKGKKGNVA 187
Query: 351 LKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVG-PIRPGR 409
LK+DISKAYDR++W +L+ +M++MGFC +WV W+M+C+ V YSVL+N K VG PI PGR
Sbjct: 188 LKLDISKAYDRIDWLYLKEVMIKMGFCHRWVNWIMMCIETVDYSVLVNQKLVGPPIIPGR 247
Query: 410 GLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEG 469
GL+QGDPLSPYLF+ C EGLS L + A+ RG L G KV
Sbjct: 248 GLQQGDPLSPYLFILCVEGLSALIRQAEARGELHGAKVSTE------------------- 288
Query: 470 SLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAGSIGGGNYL 529
EA + IL YE A GQAI+L KS I++S N ++ NI++IL V +G YL
Sbjct: 289 --TEAHTMKTILAIYEVASGQAISLPKSEIYYSRNTGADVQNNITSILGVQAVLGTSKYL 346
Query: 530 GLPSLIGKSKKQVFGFLQDRLEKRI 554
GLPS+IG+SKK F F++DR+ ++I
Sbjct: 347 GLPSMIGRSKKSTFNFIKDRVWQKI 371
>IMGA|Medtr2g005080.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3 86385-88912
E EGN_Mt090430 20090702
Length = 566
Score = 347 bits (889), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 207/544 (38%), Positives = 285/544 (52%), Gaps = 85/544 (15%)
Query: 402 VGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFAD 461
VGPI PGRGLRQGDPLSPYLF+ EGLS L RG + GVKV R P ++HLLFAD
Sbjct: 4 VGPIVPGRGLRQGDPLSPYLFILVVEGLSTLIHKEVNRGDIHGVKVCRGAPVVSHLLFAD 63
Query: 462 DSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAG 521
+ F F ++ EA+ + ILK YE A GQ INL+KS +FFS NMS ++S I+ V
Sbjct: 64 NCFLFCRANVVEAQRLLTILKTYEAASGQEINLSKSEVFFSRNMSGAAQEDLSRIIGVRH 123
Query: 522 SIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTY 581
+G G YLGLPS+I + K VF F++D + KRI W R LS+AGKEV+IKS+ Q+IP+Y
Sbjct: 124 VMGTGKYLGLPSMIDRDKWSVFSFIKDSIWKRINVWRGRALSKAGKEVMIKSVLQSIPSY 183
Query: 582 CMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFN 641
MS++ +P S+ ++K +N FWWG + RGI W+AWE M C K GG GFR+ FN
Sbjct: 184 IMSIYLLPSSVIDDIEKMVNAFWWGGRS-NNRGIKWMAWEHMACPKEFGGMGFRNFKAFN 242
Query: 642 MAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGV 701
+AM+AKQGW L+ P++L +++FK++YF FL A L
Sbjct: 243 IAMVAKQGWSLLSTPESLVARVFKSRYFPRSSFLGAKL---------------------- 280
Query: 702 RWRVGNGETIGVLSHPWM----------PLD---HSFWVED---SRDFVDPTMKVRELF- 744
VGNG+ + V++ PW+ P H V D D V K+ LF
Sbjct: 281 ---VGNGQQVSVMNDPWVRGVQGSCIQSPQSQGVHILSVSDLIADEDRVWDVDKIESLFP 337
Query: 745 ------------------------VEGEGR-------------WDVGKVMTLFSMREFRA 767
VE G WDV K+ +LF +A
Sbjct: 338 DDMVQAILDTPLFAEVHNDRITWMVECNGSCYILIGSMLKKSVWDVDKIESLFPDDMVQA 397
Query: 768 ILGIPISINASRDQIMWHWDKKGIYSVRSGYYVA--RRLLRGRVHEVDGGWWGKMWCLDA 825
IL P+ D+I W + G Y++ +GY +A L R H + W ++W +++
Sbjct: 398 ILDTPLFAEVHNDRITWMVECNGRYTINTGYKIAMMELLHTDRFHVEEE--WKRIWKVNS 455
Query: 826 SPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGE-EEDINHAIVLCSKAKGVWRQG 884
K ++ +WR R +PT+ RL+ R V+ ++ CP C ED HA V C+ A W
Sbjct: 456 HHKARNLLWRICRGCVPTRLRLQSRHVQCEVICPSCDTVVEDDWHAFVGCTVACESWYWA 515
Query: 885 GYEV 888
G +
Sbjct: 516 GLSI 519
>IMGA|AC233655_32.1 RNA-directed DNA polymerase (Reverse
transcriptase); Endonuclease/exonuclease/phosphatase
AC233655.2 202219-200303 H EGN_Mt090430 20090702
Length = 567
Score = 343 bits (881), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/463 (38%), Positives = 266/463 (57%), Gaps = 56/463 (12%)
Query: 4 SDHAPLFIQLNYRQVDNNYRRFRFDNSWVGERELDQLVKDVWCNNDSEPLLHKRDVCIKE 63
SDH+P+ + + + + R+FRF+N+W+ E EL +V D W ++PLL + +C +E
Sbjct: 158 SDHSPILLNTDPKVYEYKRRQFRFENAWLVEPELPSIVSDGWMRGQADPLLDRLALCTEE 217
Query: 64 MERWGRQFNKIFWKQKRILKQRI---ENARDGFDDVTVQRLKNEWNTILFKEECRMRQIG 120
+++WGR + + + + K+RI + + D+ V LK N +L +EE +Q
Sbjct: 218 LDQWGRSLRRRYKEDIKKCKKRIAELQTLSNNEADIEVVSLKERLNLLLIQEETFWKQRA 277
Query: 121 KQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAE 180
K WL GD NSK+FHA+ +RK+R KI KL +D V + + ++L YFS +++
Sbjct: 278 KSFWLRDGDMNSKFFHAAATSRKQRNKITKLMKDDNTKVTTQEDICTLSLEYFSNLFAPT 337
Query: 181 ESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWH 240
+ V P + A NN+LTTPF DE + F M DK+PG DGLNPAF+++F
Sbjct: 338 PCNTHPVLQAVAPCINAEDNNLLTTPFRDDEFRDVVFQMHSDKAPGSDGLNPAFYKRFSA 397
Query: 241 VIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSL 300
+ G ++ + CKQWL+ G P L +T+IVL+PKC++P ++K+ RPISLCNV+YK++AK+L
Sbjct: 398 LCGGEVIKACKQWLNLGYLPTALGETNIVLIPKCEHPRTMKDLRPISLCNVVYKMLAKAL 457
Query: 301 ANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSRKNQRGACALKIDISKAYD 360
ANRL++ L D
Sbjct: 458 ANRLQRAL---------------------------------------------------D 466
Query: 361 RVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPY 420
+ + F ++ +MGF W+ WM +CVT+VKY +L+N + VGP+ PGRGLRQGDPLSPY
Sbjct: 467 KFEYLF--SILEKMGFNSVWINWMHMCVTNVKYHILVNDEIVGPVIPGRGLRQGDPLSPY 524
Query: 421 LFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDS 463
LF+ CA G++ L + A+R L G+KV P+I+HLLFADDS
Sbjct: 525 LFILCAGGMTSLIKQAERNNILHGIKVCCIAPAISHLLFADDS 567
>IMGA|Medtr1g089710.1 RNA-directed DNA polymerase (Reverse
transcriptase); Histone H2B; Histone-fold;
Polynucleotidyl transferase, Ribonuclease H fold
chr01_pseudomolecule_IMGAG_V3 17931605-17934389 E
EGN_Mt090430 20090702
Length = 802
Score = 335 bits (858), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 193/565 (34%), Positives = 288/565 (50%), Gaps = 17/565 (3%)
Query: 374 MGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLF 433
MGF V+ +M CVT V +SVL+ GK P RGLRQGDPLSPYLF+ CAE LS L
Sbjct: 1 MGFPPNLVKTIMNCVTTVSFSVLIIGKPSNKFYPQRGLRQGDPLSPYLFILCAEVLSGLL 60
Query: 434 QDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAIN 493
G+ G+++ P I+HL FADDS FF +EA + D L+ Y+ GQ +N
Sbjct: 61 TKGLADGKFHGIQIAPTAPPISHLFFADDSLFFCRSEPKEANFLMDTLQLYQDMSGQKVN 120
Query: 494 LNKSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKR 553
L+KS + F+P++ ++ + L + S YLGLP+ G+SK Q F ++ D++ K+
Sbjct: 121 LDKSKMVFNPSLREDIKKDFQVQLPINISNKITKYLGLPTQFGRSKVQDFNYIMDKVIKK 180
Query: 554 IGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRR 613
+ W R LS AG+ VLIK++ QAI + MS F +P C +++ + KFWWG G +
Sbjct: 181 MKGWKERNLSFAGRSVLIKAVVQAIHVFVMSCFLLPQETCDNIERAVCKFWWG-SNGDNK 239
Query: 614 GIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRD 673
IHW+ +++ S +GG GFR+L FNM MLAKQ WRL L SK+FKAKY+ D
Sbjct: 240 KIHWVKKDKVLRSTIDGGLGFRNLRDFNMVMLAKQIWRLHTNQQALISKVFKAKYYPTTD 299
Query: 674 FLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDF 733
L A + P+Y WRS H A+ +L +G +VGNG +I + W+ F V
Sbjct: 300 VLQATVGYAPSYAWRSFHQAIWILNKGCCMKVGNGASIDIWKDQWLHNQIGFKVLTHNPG 359
Query: 734 VDPTMKVRELFVEGEGRW--DVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGI 791
VD +V++L ++ RW D+ + + LF ++E P+ + G
Sbjct: 360 VDNVERVQDLIIDNPQRWNKDLIEHIFLFFLKE-------PLFNKSLLPSTKARTLSCGC 412
Query: 792 YSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRG 851
+ R L R + K+W LD P+ + +WR + LP +E L +RG
Sbjct: 413 IMNLENTLLKRATLLSRFGRPNK---TKIWSLDTIPRHRVLLWRIINKALPVREELHKRG 469
Query: 852 VEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGYEV---GDINISFTNFFLQVLAHGD 907
+ + CP C E E I+H + C ++ + + F N+ + + D
Sbjct: 470 INCSLLCPRCEEGIETIDHLFLNCDCSRRELFGSNLGINFQSNTTADFVNWLISFIYTND 529
Query: 908 KIKSQHFLVYARYIWMARNNALWNN 932
K + IW ARN ++ +
Sbjct: 530 KPPIINLAALLYSIWHARNQKVFED 554
>IMGA|Medtr7g047570.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
11971058-11973594 E EGN_Mt090430 20090702
Length = 628
Score = 296 bits (759), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 181/539 (33%), Positives = 288/539 (53%), Gaps = 25/539 (4%)
Query: 82 LKQRIENARDGFDDVTVQR-LKNEWNTILFKEECRMRQIGKQRWLSWGDQNSKYFHASIK 140
+++RI N R + ++R L+ E + I +EE Q + +WL GD+N++Y+H
Sbjct: 108 IQRRIRNGRGHSGLMRLKRKLQKEMSRIFQQEELMWFQRSRAKWLVDGDRNTRYYHLKTV 167
Query: 141 NRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEESVGIEIF--NLVQPKVTAI 198
R+RR KI+ L N DG V+ + ++ + Y+ +++ E F +L P++
Sbjct: 168 QRRRRNKIIMLRNVDGHWVEIVEEVKDMVNKYYYELFTTNVDTS-EWFQTSLAFPRLDLE 226
Query: 199 QNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGT 258
IL P +EI A F+M P K+PGPDG F+QK W +IG + K+ +
Sbjct: 227 TLEILRHPLVDEEIRSAVFSMTPWKAPGPDGFPAGFYQKSWSIIGKNTCDFIKKLWCSPE 286
Query: 259 FPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSA 318
+ T+I L+PK +P + ++RPISLCN +YKI++K + NRLK + I+ Q+
Sbjct: 287 QLAEINSTNICLIPKVQDPQFVNQFRPISLCNTVYKILSKVIVNRLKNCVAEIVSPFQTG 346
Query: 319 FVPGRLISDNVAVAFELIHNIKSRKNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFCE 378
F+PGR I +N+ VA E+IH C + + YD ++W F+ +L +G
Sbjct: 347 FIPGRSIHENIVVAQEMIH-----------CGSR----QTYDNLSWNFIHMTLLEVGLPM 391
Query: 379 KWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKR 438
+ + +M VT V+ +V NG P +GLRQGDP+SPYLF+ C + LS L +A
Sbjct: 392 EMINVIMHSVTTVRTNVRWNGNRADFFTPKKGLRQGDPISPYLFVICMDKLSHLISEAID 451
Query: 439 RGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSG 498
+G +K GR P I+HL+FADD F + + + V ++L K+ LGQ+I++ K+
Sbjct: 452 KGDWLDLKTGRTGPMISHLMFADDLLLFGQATDSQMRGVMEVLNKFCHLLGQSISIQKTT 511
Query: 499 IFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKS-KKQVFGFLQDRLEKRIGNW 557
IFFS N+ R + I + G YLG+P L GK+ +++ F +L + + ++ W
Sbjct: 512 IFFSSNVYRVTRRLLVDISGFRETTELGKYLGVP-LTGKAPRRKDFQYLVNEVRNKLTAW 570
Query: 558 SNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIH 616
+ S AG+ L KS+ +AIP M +P + +QK F WG KE R+ IH
Sbjct: 571 KSNQFSFAGRVTLAKSVIEAIP---MMNSVVPKAYVQEIQKVQRAFIWGDKE-VRKHIH 625
>IMGA|Medtr1g024000.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
5513052-5515983 E EGN_Mt090430 20090702
Length = 591
Score = 288 bits (736), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 160/347 (46%), Positives = 210/347 (60%), Gaps = 45/347 (12%)
Query: 200 NNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTF 259
N +LT+P T +E+ A F M PDKSP PDG NPAF+Q+FWHV GDDI++ WLD G F
Sbjct: 4 NTMLTSPVTKEELRRALFQMHPDKSPSPDGFNPAFYQRFWHVCGDDIFQAVVSWLDRGYF 63
Query: 260 PKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAF 319
P LT T+I L+ KC++P ++K+ RPISLCNVLYK+V+K LANRLK+ L + E QSAF
Sbjct: 64 PTNLTKTNICLILKCEDPDNMKDLRPISLCNVLYKMVSKLLANRLKRCLDKCVSEEQSAF 123
Query: 320 VPGRLISDNVAVAFELIHNIKSR-KNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFCE 378
V GR I DN + E+IH++K + K RG ALKIDI+KAYD+V W FLRG+++RMGF E
Sbjct: 124 VEGRSILDNALITTEIIHSMKRKTKGWRGELALKIDINKAYDKVGWGFLRGVLMRMGFNE 183
Query: 379 KWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKR 438
KW+QWMM+C GDPLSPYLF+ EGLS L A
Sbjct: 184 KWIQWMMMC--------------------------GDPLSPYLFILVDEGLSTLIHKAVN 217
Query: 439 RGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSG 498
RG + G++V R P ++HLLFADD F F + V+ I K+ G+A L+K+G
Sbjct: 218 RGDIHGIQVCRGAPVVSHLLFADDYFLFCRAN------VDRIWKRINAWRGRA--LSKAG 269
Query: 499 IFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGF 545
+E+M I ++L S YL S+I +K + F
Sbjct: 270 --------KEVM--IKSVLQSIPSYIMSIYLMPSSVIDDIEKMINAF 306
Score = 185 bits (470), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 121/396 (30%), Positives = 182/396 (45%), Gaps = 74/396 (18%)
Query: 548 DRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGK 607
DR+ KRI W R LS+AGKEV+IKS+ Q+IP+Y MS++ +P S+ ++K +N FWWG
Sbjct: 251 DRIWKRINAWRGRALSKAGKEVMIKSVLQSIPSYIMSIYLMPSSVIDDIEKMINAFWWGG 310
Query: 608 KEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAK 667
+ R GI W+AWERM C K GG GF + FN+AM+AKQGW + + ++L +++F+A+
Sbjct: 311 RSNNR-GIKWMAWERMACPKEFGGMGFMNFKAFNIAMVAKQGWSFLSKLESLVARVFEAR 369
Query: 668 YFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWV 727
YF FL A L ++ WRSI + +L G RW VGNG+ + V++ PW+
Sbjct: 370 YFPRSSFLGAKLGNNLSFAWRSIWNSRQILLHGCRWTVGNGQQVSVMNDPWV-------- 421
Query: 728 EDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWD 787
R D ++V IL P+ D+I W +
Sbjct: 422 ---RGVQDDMVQV---------------------------ILDTPLFAEVQNDRITWMME 451
Query: 788 KKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERL 847
+ Y V++ Y +A L R++ C D W+ + V+
Sbjct: 452 RNRRYIVKTDYKLAMMELLWRIY-----------CQDCYKLAIKGAWQRIWKVI------ 494
Query: 848 RRRGVEVDIGCPWCGE-EEDINHAIVLCSKAKGVWRQGGYE------VGDINISFTNFFL 900
CPWC ED +A V C+ A+ W G VG ++ S +F
Sbjct: 495 ----------CPWCDTIVEDDWNAFVGCTVARESWYWAGLSTVRQPRVGTVS-SLADFIF 543
Query: 901 QVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDT 936
+ + + IW A N+ +WN T
Sbjct: 544 DICRSESRDIVGRVALLLWQIWAACNDTIWNYAHHT 579
>IMGA|Medtr3g016900.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
3397609-3394716 E EGN_Mt090430 20090702
Length = 703
Score = 271 bits (693), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 156/446 (34%), Positives = 229/446 (51%), Gaps = 36/446 (8%)
Query: 393 YSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCP 452
+S+L+NG +P RG+RQGDPLSPYLF+ CA+ LS L +L G+ + N P
Sbjct: 284 FSILINGVPTPVFKPKRGIRQGDPLSPYLFILCADVLSGLITKYHDDNKLHGISIANNAP 343
Query: 453 SITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTN 512
+++HL FADDS F + EA+ + +I Y+ GQ INLNKS + F+ N+++ + T
Sbjct: 344 TLSHLTFADDSMVFCRANKSEAQNLMEIFADYQSISGQKINLNKSEMVFNSNLNQTIQTE 403
Query: 513 ISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIK 572
+ + + YLGLP+ + K Q+F F+ + R LS + + VLI+
Sbjct: 404 FQQYMTIKITNNIDKYLGLPTQV--LKNQIFNFIME-----------RNLSFSSRGVLIR 450
Query: 573 SIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGR 632
++ QAIP+Y LS+ F WG E RR IHW + E + SK GG+
Sbjct: 451 AVIQAIPSY--------LSV---------DFGWGGSEEKRR-IHWKSKEVLFKSKFNGGQ 492
Query: 633 GFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHA 692
GFR +H FN A+ AKQ WRL+ +P TL SK KAKY+ + D L A R P++VW SIH
Sbjct: 493 GFRTMHHFNEALFAKQAWRLIHQPQTLISKCLKAKYYPHTDLLRARRGRNPSFVWSSIHH 552
Query: 693 AMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWD 752
A V+++G W++GNG + V W+P + F + +V+EL VE W
Sbjct: 553 AEWVIQKGGCWKIGNGSQVNVWEDNWIPQHNGFKIYTPGANSSSIRQVKELLVEDPRGWH 612
Query: 753 VGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARR-----LLRG 807
+ F E I +P+ D MW + + G Y+V+SGY + L
Sbjct: 613 QSILENHFLSFESERIQQLPLVQEVLEDSYMWMYSQDGNYTVKSGYNFIKEWHYNSLPGP 672
Query: 808 RVHEVDGGWWGKMWCLDASPKDKDFM 833
+ + W W LD P+ KD +
Sbjct: 673 SNNNNNQRIWKASWNLDTIPRHKDLL 698
>IMGA|Medtr2g034130.1 Polynucleotidyl transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 9482517-9480709 E
EGN_Mt090430 20090702
Length = 602
Score = 247 bits (631), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 147/483 (30%), Positives = 238/483 (49%), Gaps = 23/483 (4%)
Query: 548 DRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGK 607
DR+ K++ W + LS G+ VLI+++AQAIP Y MS + +P+S+C +++ + FWWG
Sbjct: 2 DRIRKKLKGWKEKNLSFEGRGVLIRAVAQAIPVYVMSCYLLPISLCEDIERAVCNFWWGG 61
Query: 608 KEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAK 667
E R+ IHW++ + + K+EGG GF+ L FN+AMLAKQ WRL + PD+L +K KAK
Sbjct: 62 TEHTRK-IHWVSKQILFKQKKEGGMGFKILRDFNLAMLAKQIWRLHIYPDSLLAKCLKAK 120
Query: 668 YFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWV 727
Y+ N D L A P+Y WRS+ ++ +L +G WR+GNG+ + + S W+P ++ +
Sbjct: 121 YYPNSDVLKATAGYNPSYAWRSLQKSIWILNKGCCWRIGNGDQVHIQSDNWLPYNNGYKP 180
Query: 728 EDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWD 787
S P V++L E W+ + F + I +PI D +MW +D
Sbjct: 181 IYSNPNSPPM--VKDLLTEFPFDWNYNLLQQNFLPMDSSQIAQLPIIHPNKPDVLMWMFD 238
Query: 788 KKGIYSVRSGY-----YVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLP 842
G Y+V+SGY + A V+ W K+W L P+ K +WR L N LP
Sbjct: 239 LSGSYTVKSGYNAIQNWKATASNDSSASSVNNTLWQKLWNLKTIPRHKSLLWRILNNSLP 298
Query: 843 TKERLRRRGVEVDIGCPWCG-EEEDINHAIVLCSKAKGVWRQGGYEVGDINIS---FTNF 898
++ L RRG++ I CP C +EE + H + CS ++ VW + +IS F+++
Sbjct: 299 LRDNLLRRGIQCSILCPRCNIKEETMTHLFMRCSHSERVWFGSQLSIQMPSISNQQFSDW 358
Query: 899 FLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLKAKEYMISWEHTKLAQ 958
+ + + D +W ARN A+ +I +A + ++
Sbjct: 359 IAETILNKDSNTVIQVAAITYSLWYARNQAVHEDILIPETHIIQRAASSLSAYLKANAKV 418
Query: 959 RSMASESSNTSRQRHAIFPPGRLSNSG------DQSWQAFVDGSIFEQEGMQGFGAVMES 1012
S S+ H G ++S D S+ + + +G G G ++
Sbjct: 419 SETGSSHSSVVSTNH-----GNHASSSEKWKRPDHSFVKVNTDANLQVQGRWGLGCIIRG 473
Query: 1013 EEG 1015
E+G
Sbjct: 474 EDG 476
>IMGA|Medtr7g107300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
25061037-25062481 E EGN_Mt090430 20090702
Length = 407
Score = 246 bits (629), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 139/407 (34%), Positives = 216/407 (53%), Gaps = 7/407 (1%)
Query: 499 IFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWS 558
+ FSPN+S+E I L+V S G YLG+P+ G+SK+Q F F+ +R+ K+ W
Sbjct: 1 MVFSPNISQEFKEEIQKHLHVKISDGIQKYLGMPTQFGRSKEQDFHFIMERIWKKHKGWK 60
Query: 559 NRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWL 618
+ LS G+ VLIK++AQAIPTY MS F +P +C ++K + FWWG + ++ +HW+
Sbjct: 61 KKCLSFEGRGVLIKAVAQAIPTYYMSCFMLPKGLCTKIEKAICSFWWGTTDKNKK-MHWV 119
Query: 619 AWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAP 678
+ +++ SK GG GF+ L FN+AMLAK+ R P++L +K FKA Y+ + D L A
Sbjct: 120 SKKKLFRSKHSGGLGFKTLRDFNLAMLAKKVRRFYTNPNSLIAKCFKANYYPHTDILQAK 179
Query: 679 LSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTM 738
+ P+Y W+SI A+ V+ +G WR+G+G +I + W+P V ++
Sbjct: 180 VGNYPSYAWKSIQNAIWVISKGSCWRIGDGGSINIWEDNWVPTYKGLKVMTTKGPNHFVN 239
Query: 739 KVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGY 798
+V++L E W+ + F I IP+ + D +MW + GIYSV+SGY
Sbjct: 240 RVKDLINNQESLWNKVILEDQFISINIDQISHIPLVNTTNPDSLMWMHNPTGIYSVKSGY 299
Query: 799 YVARRLLRGRVHEVDGG-----WWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVE 853
R +++ W K+W L P+ K +WR L + LP + LR+RG++
Sbjct: 300 NTLRTWQTQQINNTSTSSDETLIWKKIWSLHTIPRHKVLLWRILNDSLPVRSSLRKRGIQ 359
Query: 854 VDIGCPWC-GEEEDINHAIVLCSKAKGVWRQGGYEVGDINISFTNFF 899
CP C + E I H + C +K VW + N+ NF
Sbjct: 360 CYPLCPRCHSKTETITHLFMSCPLSKRVWFGSNLCINFDNLPNPNFI 406
>IMGA|Medtr8g024620.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4663551-4665766 E
EGN_Mt090430 20090702
Length = 587
Score = 243 bits (620), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 145/483 (30%), Positives = 230/483 (47%), Gaps = 43/483 (8%)
Query: 557 WSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIH 616
WS++ LS+AG+EV+IKS+ Q IP+Y MSVF +P ++ ++K +N FWWG R+GIH
Sbjct: 41 WSSQCLSKAGREVMIKSVLQVIPSYIMSVFLLPTTLVDEIEKMVNGFWWGHGGSRRKGIH 100
Query: 617 WLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLD 676
WL+W+++ K GG GF+DL FN+ ML KQGW+ + + L SKLFKA+YF + D+L
Sbjct: 101 WLSWDKLTVHKNYGGMGFKDLTAFNLVMLGKQGWKFQTQTNCLVSKLFKARYFPSSDYLG 160
Query: 677 APLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDP 736
A L +P++VWRSI +A V+++G + G G+ V+ H
Sbjct: 161 AKLGHKPSFVWRSIFSAKRVIREGGKCVSGEGQNSEVIQHA------------------- 201
Query: 737 TMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRS 796
K+ L W+ + F + IL P+ DQ++W +K G YSVRS
Sbjct: 202 --KIHSLIDHNLRCWNQDVIHCYFDNSTAQQILKTPLFRQVEEDQLIWKAEKNGHYSVRS 259
Query: 797 GYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDI 856
Y + + + G+W +W L ASPK K+ +WR LPT+ +L + V
Sbjct: 260 AYRICMEEIGDNSYLHRPGFWNGIWKLKASPKVKNLIWRICLGCLPTRAKLLDKRVNCTS 319
Query: 857 GCPWC-GEEEDINHAIVLCSKAKGVWRQG--------GYEVGDINISFTNFFLQVLAHGD 907
C C G ED H + C +A+ +WR + + + LQ L H
Sbjct: 320 MCSMCDGNYEDDLHVLFDCQRARSIWRDSHLSNDIYVAMQTNNTAADIVSALLQNLPH-- 377
Query: 908 KIKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLKAKEYMISWEHTKLAQ----RSMAS 963
K Q F+ +W +RN +W N+ ++ + +A + + W+ + RS+
Sbjct: 378 -TKIQLFVTLVWSLWKSRNIQVWQNMPESSQSIVERAHQLLHGWKAANNCRNRFDRSVIG 436
Query: 964 ESSNT------SRQRHAIFPPGRLSNSGDQSWQAFVDGSIFEQEGMQGFGAVMESEEGIF 1017
++T S R ++ VD S + G+G + + G F
Sbjct: 437 AETHTVNTMSGSSCTQVQQDQFRCQKPTRGRFKCNVDASFSVHLNVVGYGMCIRDDRGNF 496
Query: 1018 IQA 1020
++A
Sbjct: 497 VKA 499
>IMGA|Medtr8g021900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
4206337-4207793 E EGN_Mt090430 20090702
Length = 357
Score = 241 bits (614), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 120/310 (38%), Positives = 187/310 (60%), Gaps = 3/310 (0%)
Query: 442 LQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFF 501
+ G+ + RN P+I+HL FADD+ F + EA+ + +I +Y+R LGQ INLNKS + F
Sbjct: 30 IMGISIARNAPAISHLFFADDNMIFCRANKSEAKHLKEIFDEYKRVLGQKINLNKSEMVF 89
Query: 502 SPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRF 561
SPN+ + + + + + YLGLP+ +G+SK F F+ +R+ ++ W R
Sbjct: 90 SPNIIQSVKKEFQDFMPIQITDSITKYLGLPTQVGRSKTHTFNFIMERVRAKLKGWKERN 149
Query: 562 LSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWE 621
LS +G+ VLI+++ QA+PTY MS+F IP IC +++ + +FWWG E RR IHW +
Sbjct: 150 LSFSGRGVLIRAVIQALPTYVMSMFLIPEGICDKIEQAICRFWWGGNE-DRRRIHWKNKD 208
Query: 622 RMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSR 681
+ K GG+GFR + FN A+LAKQ WRL+ P + + KAK+F N D L A L
Sbjct: 209 FLFKPKFSGGQGFRTMRSFNEALLAKQVWRLIKYPTSFLATCLKAKHFPNTDVLKAKLGN 268
Query: 682 RPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSF-WVEDSRDFVDPTMKV 740
+P++VW SI+ ++K+G RW +G+G+ I V W+P + F V + +D + V
Sbjct: 269 QPSFVWSSIYHTKWIIKKGGRWLIGDGKKIDVWDDNWLPHQNGFKTVSKPTNNIDIRI-V 327
Query: 741 RELFVEGEGR 750
++L VEG+ +
Sbjct: 328 KDLMVEGQKK 337
>IMGA|Medtr3g138250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35324945-35323011 H EGN_Mt090430 20090702
Length = 613
Score = 239 bits (609), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 156/529 (29%), Positives = 248/529 (46%), Gaps = 65/529 (12%)
Query: 528 YLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFK 587
YLG+P+ +G SK+Q F FL DR+ ++ W + LS G+ +LI+++AQAI TY MS F
Sbjct: 22 YLGMPTHLGMSKEQDFQFLMDRVWNKLKGWKEKSLSFEGRGILIRAVAQAISTYIMSCFL 81
Query: 588 IPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAK 647
+P +C ++K + FWWG + R+ IHW E + SK EGG GF L FN+AMLAK
Sbjct: 82 LPKGLCDKIEKAVCAFWWGSTDNKRK-IHWTKKENLFKSKLEGGMGFNILRDFNLAMLAK 140
Query: 648 QGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGN 707
Q WR EP++L S+ +KAKY+ + + L A + P+Y WRSI A+ ++K+G WR+GN
Sbjct: 141 QDWRFHTEPNSLISRCYKAKYYPHCNVLQATIGNNPSYAWRSIFNALWIIKKGSCWRIGN 200
Query: 708 GETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRA 767
G+ +L + W+ + F + A
Sbjct: 201 GQ-------------------------------EDLIMVNSSTWNSELLNNQFLGIDTEA 229
Query: 768 ILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEV-----DGGWWGKMWC 822
I IPI RD +MW ++K G Y+V+SGY + G + + W K+W
Sbjct: 230 IEQIPIIDIFHRDTLMWMFEKTGSYTVKSGYTAIQIWKNGSQNSPSSSSENTKLWKKIWN 289
Query: 823 LDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVW 881
L P+ K +WR L N +P + L +RGV CP C + E +H + C +W
Sbjct: 290 LHTIPRHKTILWRILNNSIPLRSELGKRGVLCSPLCPRCETKIETTDHIFMHCPNISKIW 349
Query: 882 RQGGYEVGDINISFTNFFLQVLAHGDKIKSQHFLVYARY---IWMARNNALWNNI----- 933
+ + +++ +F ++ +K + A IW ARN +++ ++
Sbjct: 350 FRSNLNLKTLDLPIPSFRDWLMHSILTLKEDTIIQIASITYNIWQARNQSIYEHMYKPEA 409
Query: 934 -----RDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNTSRQRHAIFPP--GRLSNSGD 986
D C + FL+A+ +S L S + + S R PP G + D
Sbjct: 410 DIIQRSDRCVSDFLQAQ---LSDTVDNLNHDISYSNAPHQSVARRQWQPPPLGIFKGNSD 466
Query: 987 QSWQAFVDGSIFEQEGMQGFGAVMESEEGIFIQAISGHFTGGMDPFIAE 1035
+ +Q G G GA++ ++ G+ + A + G + AE
Sbjct: 467 AN---------LQQTGWWGLGAIIINDLGLVMAAATWRLKGSEEVITAE 506
>IMGA|Medtr8g034900.1 contains similarity to reverse trancriptase,
related, putative chr08_pseudomolecule_IMGAG_V3
7642559-7645649 E EGN_Mt090430 20090702
Length = 541
Score = 223 bits (567), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 117/334 (35%), Positives = 184/334 (55%), Gaps = 6/334 (1%)
Query: 531 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPL 590
+P+ G+SK+Q F F+ DR+ K++ W + LS G+ LI++IAQAIPTY MS F +P
Sbjct: 1 MPTQFGRSKEQDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAIAQAIPTYVMSCFLLPK 60
Query: 591 SICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGW 650
+C ++K + FWWG + R+ IHW E + + +GG GF+ L FNMAMLAKQ W
Sbjct: 61 GLCEKIEKAVCAFWWGGSDSKRK-IHWTKKENLFKPRHKGGMGFKILRDFNMAMLAKQVW 119
Query: 651 RLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGET 710
R +L S++FKAKYF +D L L +Y WRSI ++ V+++G W++GNG+
Sbjct: 120 RFQTNQKSLISRVFKAKYFPYQDILQTNLGYNLSYAWRSIFHSIWVIQKGSCWKIGNGQK 179
Query: 711 IGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILG 770
+ + W+P + + + V++L E W+ + T F + I
Sbjct: 180 VRIWEDNWIPTHQNLRIFTPNMGNPDVVLVKDLINTDEPSWNNSILNTHFLSIDKDQIEC 239
Query: 771 IPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHE-----VDGGWWGKMWCLDA 825
IP+ A+ D+I+WH+++ G Y+VRSGY + + E ++ W K+W +
Sbjct: 240 IPLINLANDDEIIWHFNQDGNYTVRSGYQAIQNWKITTISEPSNSNIETNLWKKLWTIHT 299
Query: 826 SPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCP 859
P+ K +WR L N LP + L +RG+ + CP
Sbjct: 300 IPRHKMILWRVLNNTLPLRSELGKRGILCNPLCP 333
>IMGA|AC225611_8.1 contains similarity to reverse trancriptase,
related, putative AC225611.10 67770-68780 H EGN_Mt090430
20090702
Length = 336
Score = 216 bits (550), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 113/325 (34%), Positives = 175/325 (53%), Gaps = 6/325 (1%)
Query: 531 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPL 590
+P+ G+SK+Q F FL DR+ K++ W + LS G+ VLI+ +AQAIPTY MS F +P
Sbjct: 1 MPTHFGRSKEQDFNFLMDRIWKKLKGWKEKSLSFEGRGVLIRVVAQAIPTYIMSCFLLPK 60
Query: 591 SICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGW 650
SIC +++ + FWWG E R+ IHW+ + + K +GG GFR+L FN+AMLAKQ W
Sbjct: 61 SICDRIERAICSFWWGSNETKRK-IHWIKKDHLFKFKHDGGMGFRNLRDFNLAMLAKQVW 119
Query: 651 RLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGET 710
RL +P +L ++ +KA+Y+ N D L P+Y WRSI ++ ++ +G R+GNG
Sbjct: 120 RLHTQPQSLIARCYKARYYPNSDVLQVSQGYNPSYAWRSISQSIWIINKGSCKRIGNGYN 179
Query: 711 IGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILG 770
+ W+P +F V + V++L + W+ + F E I
Sbjct: 180 TKIWEDNWIPYHSNFKVLSPKLDTTNINLVKDLIQDNGTEWNTDILQANFIPYEQDLIKQ 239
Query: 771 IPISINASRDQIMWHWDKKGIYSVRSGYYVARRLL-----RGRVHEVDGGWWGKMWCLDA 825
IP+ + + D++MW D G+Y+V+SGY + R W K+W L
Sbjct: 240 IPLINHNNSDELMWMKDTDGLYTVKSGYQAIQSWKQNDQDRPTTSNTSPKIWKKLWALQT 299
Query: 826 SPKDKDFMWRALRNVLPTKERLRRR 850
P+ K MWR + N LP ++ ++
Sbjct: 300 IPRHKMLMWRIINNALPINSKMDKQ 324
>IMGA|Medtr8g053420.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
12119249-12120974 H EGN_Mt090430 20090702
Length = 477
Score = 215 bits (547), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/451 (31%), Positives = 210/451 (46%), Gaps = 44/451 (9%)
Query: 403 GPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADD 462
G RP LRQGDPLSPYLF+ C E LS + +A R + V + RN P ++HL FADD
Sbjct: 13 GQKRPIGRLRQGDPLSPYLFVMCMENLSHMILEAVDDSRWKPVTLSRNGPPLSHLFFADD 72
Query: 463 SFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAGS 522
F + ++ + + D+ K+ G +N +KS FFS ++ + + ++ + +
Sbjct: 73 VLLFSKATVSQVRVMEDVFTKFAGTSGLKVNTSKSRAFFSNVVTHSKINTMVSVTGIHNT 132
Query: 523 IGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYC 582
YLG P G+ K+ + FL D+++ + +W N+ L++AG+ L KS+ AIPTY
Sbjct: 133 SSLDKYLGFPIFHGRMKRVDYDFLIDKVQSCLASWKNKLLNKAGRLTLAKSVLNAIPTYY 192
Query: 583 MSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNM 642
M + P SIC + K KF W +G +G+H ++W+++ K GG G R N
Sbjct: 193 MQISWTPQSICNQLDKMTRKFIWKGTDG--KGVHLVSWDKITRPKSLGGLGVRVARNANT 250
Query: 643 AMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVR 702
A+L K W + + + ++ KY N + LD P + + W S+ A VL+ G+
Sbjct: 251 ALLGKLVWDIHTNANKSWVQILSNKYLGNYNVLDVP-KKNGSTTWNSMLKARSVLRDGLV 309
Query: 703 WRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSM 762
+RVGNG T SFW W + T SM
Sbjct: 310 FRVGNGTT-------------SFWYSS---------------------WTT--LGTFASM 333
Query: 763 REFRAILGIPISIN--ASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGW-WGK 819
+ I I + I D I W GIY+VRSGY+ H+ D W W
Sbjct: 334 VLWVDIHYISLCIRDLIIDDHITWANHLDGIYTVRSGYFWLLTTHSEDHHDEDVSWNW-- 391
Query: 820 MWCLDASPKDKDFMWRALRNVLPTKERLRRR 850
+W + A K K W A LPTK L RR
Sbjct: 392 IWKMKAPEKIKFLFWTASHVSLPTKALLHRR 422
>IMGA|Medtr1g010300.1 RNA-directed DNA polymerase (Reverse
transcriptase); Ribonuclease H
chr01_pseudomolecule_IMGAG_V3 1684225-1680716 E
EGN_Mt090430 20090702
Length = 659
Score = 214 bits (546), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/322 (34%), Positives = 167/322 (51%), Gaps = 5/322 (1%)
Query: 385 MLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQG 444
M C+T S+ NG+++ +P RGLRQGDPLSPYLF+ C E LSL+ Q+ +
Sbjct: 1 MSCITSSSLSLKWNGEKLDSFKPKRGLRQGDPLSPYLFVLCMEKLSLMIQNQVTNNTWRP 60
Query: 445 VKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPN 504
+K+ R+ PS +HLLFADD F E + + V ++L+K+ A G IN+ K S N
Sbjct: 61 IKISRHGPSFSHLLFADDCLLFTEAKSSQVKVVRNVLQKFCFASGLKINIQKLKFMSSSN 120
Query: 505 MSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSR 564
+SR ++L + G YLG P L G+ K F F+ D++ R+ W LSR
Sbjct: 121 VSRHKQHKFESLLQFNHTSHLGKYLGFPMLSGRIKNSDFNFILDKINGRLAGWKMNLLSR 180
Query: 565 AGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMC 624
G+ L KS+ A+P Y M +P IC + + F WGK HW+ W+ +
Sbjct: 181 PGRITLAKSVVTAMPIYTMQNLWLPSGICENIDATVRSFIWGKNY-----CHWVNWKNLT 235
Query: 625 CSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPT 684
K GG G R N+++L K W ++ +P+ L+ ++ + KY N + P +
Sbjct: 236 MPKSCGGLGIRTARNSNISLLGKHIWDILHQPEKLWVQMLRHKYLSNTHIMHTPFKLGDS 295
Query: 685 YVWRSIHAAMGVLKQGVRWRVG 706
+WR+I A+ +L G RVG
Sbjct: 296 CIWRAIVKAVEILGPGFVCRVG 317
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 81/215 (37%), Gaps = 28/215 (13%)
Query: 817 WGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGE--EEDINHAIVLC 874
W +W L S + F W + LP R + D C CG E DI H + C
Sbjct: 340 WSWIWRLQVSENLRHFCWLVMHASLPINAFRGSRHLTSDTSCQRCGAFVESDI-HTLRDC 398
Query: 875 SKAKGVWRQGGYEVGDINISFTN-FFLQVLA-----HGDKIKSQHFLVYARYIWMARNNA 928
AK +WR ++ ++ N F++Q H + F+V IW RN
Sbjct: 399 PMAKKIWRH-------LSPTYPNDFYMQDCQLWFKRHAVRETGTRFIVACYEIWRNRNEE 451
Query: 929 LWNNIRDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNTSRQRHAIFPPGRLSNSGDQS 988
++ N+R + + Y H+ + + + RQ PP +
Sbjct: 452 IFQNVRKATWESVNNIISY-----HSSMVHALGPTNKCHVIRQVRWNPPP-------EDF 499
Query: 989 WQAFVDGSIFEQEGMQGFGAVMESEEGIFIQAISG 1023
+ VDGS F G GFG ++ + G + SG
Sbjct: 500 IKINVDGSSFGNPGNAGFGGLLRNNRGNWTHGFSG 534
>IMGA|Medtr3g009340.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
1329629-1330366 H EGN_Mt090430 20090702
Length = 245
Score = 211 bits (537), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 151/252 (59%), Gaps = 8/252 (3%)
Query: 219 MQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPL 278
M+ +PGPDGL F+ +W V+G + D L+ P T+I L+PK +NP
Sbjct: 1 MKSLAAPGPDGLPALFYHHYWDVLGTEAALDV---LNNNADPSPFNSTNICLIPKKNNPS 57
Query: 279 SLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHN 338
++ PI+L KI+ K++ANRLK IL +I QSAF+PGRLISDN +++E+ H
Sbjct: 58 HPSDFWPIAL-----KIITKTIANRLKPILGEVISGNQSAFLPGRLISDNTLMSYEIFHY 112
Query: 339 IKSRKNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLN 398
+ + +++G +K ++KAYD+V W FL ML+MGF ++V +M CVT V +S+L++
Sbjct: 113 LSNTSSKKGYMGMKTVMAKAYDKVEWTFLEATMLKMGFPHQFVSTIMRCVTTVTFSILID 172
Query: 399 GKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLL 458
G +P RGLRQGDPLSPYLF+ C + S L A + GVK+ P ITHL
Sbjct: 173 GSNSKEFQPQRGLRQGDPLSPYLFIICVDVFSELINKANNNKLIHGVKIVNGAPEITHLF 232
Query: 459 FADDSFFFFEGS 470
FAD + F + +
Sbjct: 233 FADANLTFCKAT 244
>IMGA|Medtr4g159490.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
40247310-40247920 H EGN_Mt090430 20090702
Length = 187
Score = 209 bits (533), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 125/174 (71%), Gaps = 1/174 (0%)
Query: 280 LKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNI 339
+K+ RPISLCNVLYK+V K L NRLK+ L + E QS F R I DN +A E+IH++
Sbjct: 1 MKDLRPISLCNVLYKMVLKLLTNRLKRCLDKCVLEEQSTFFKSRSILDNALIATEIIHSM 60
Query: 340 KSR-KNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLN 398
K + K RG ALKIDISKAYDRV+W FLRG+++RMGF EKW+QWMM+CV+ V YSVL N
Sbjct: 61 KRKTKGWRGELALKIDISKAYDRVDWGFLRGVLMRMGFSEKWIQWMMMCVSSVTYSVLTN 120
Query: 399 GKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCP 452
VGPI PGRGLRQGDPLSPYLF+ AEGLS L G + GV+V R P
Sbjct: 121 FDRVGPIVPGRGLRQGDPLSPYLFILVAEGLSTLIHKIVNSGDIHGVQVCRGAP 174
>IMGA|Medtr3g061320.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
13555953-13554878 H EGN_Mt090430 20090702
Length = 318
Score = 208 bits (530), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 112/332 (33%), Positives = 182/332 (54%), Gaps = 18/332 (5%)
Query: 118 QIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVY 177
Q + WL GD N+K+FH+ + +R+R I L + +G IV+ + + + N+FS+ +
Sbjct: 4 QKSRLLWLKKGDANTKFFHSIMSSRRRANSIFSL-SANGTIVEGVEGIRGLVFNHFSSHF 62
Query: 178 SAEESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQK 237
+ + I NL + Q LT PF++DE+ +A ++ KSPGPDG+N F +
Sbjct: 63 KSVAAERPSIENLNFNILNLGQCGELTKPFSIDEVKQAVWDCDSFKSPGPDGVNMGFVKD 122
Query: 238 FWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVA 297
FW + DDI + G K + +T I L+PK + P L ++RPIS+ LYKI++
Sbjct: 123 FWPELRDDIMHFLSDFHRNGKLSKGINNTFIALIPKIECPQRLNDFRPISMVGSLYKILS 182
Query: 298 KSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSRKNQRGACALKIDISK 357
K L+NRL++++ ++ D + +A E++ + K K + K+D K
Sbjct: 183 KVLSNRLRRVIQIL---------------DGILIANEIVKDAKRLK--KDLLLFKVDFEK 225
Query: 358 AYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPL 417
A+D +NW +L +M +M + W +W+M CV+ SVL+NG + RGLRQGDP
Sbjct: 226 AFDSINWSYLEAVMKKMNYPTLWRKWIMECVSTASTSVLVNGSPTDEFKLERGLRQGDPF 285
Query: 418 SPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGR 449
SP+LFL AEGL+++ + G G K+G+
Sbjct: 286 SPFLFLIAAEGLNVMMKALIEAGLFSGYKLGQ 317
>IMGA|AC233685_57.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233685.2 242381-241350 H EGN_Mt090430
20090702
Length = 268
Score = 204 bits (519), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 154/260 (59%), Gaps = 19/260 (7%)
Query: 371 MLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLS 430
M RMG + V+WM +C+ V Y V++NG+ V PI P RGLRQGDPLSPYLF+ C EGLS
Sbjct: 1 MRRMGLHDILVKWMSMCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLS 60
Query: 431 LLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQ 490
+ A+ R + GVK+ R +THLLFADD F F + ++QE+ ++ +IL+ YE Q
Sbjct: 61 AQLKKAEARVDIHGVKLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQ 120
Query: 491 AINLNKSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRL 550
AIN K I FS N S + + S Y K++ FG+L+D +
Sbjct: 121 AINFRKPEI-FSKNTSEA---------DRSQSKMSYRY---------KKRENFGYLRDGV 161
Query: 551 EKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEG 610
++I W + LS+AG+EVLIK + QAIPTYCMS F +P ++ +Q +N FWWG
Sbjct: 162 WRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSFWWGLNRR 221
Query: 611 GRRGIHWLAWERMCCSKREG 630
+GI WL+W+++ K G
Sbjct: 222 QGKGIDWLSWDKLTTRKEYG 241
>IMGA|AC233572_22.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233572.2 97249-98280 H EGN_Mt090430
20090702
Length = 258
Score = 202 bits (513), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 107/260 (41%), Positives = 149/260 (57%), Gaps = 29/260 (11%)
Query: 371 MLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLS 430
M RMG + V+WM +C+ V Y V++NG+ V PI P RGLRQGDPLSPYLF+ C EGLS
Sbjct: 1 MRRMGLHDILVKWMSMCMNSVNYQVIVNGERVRPIIPKRGLRQGDPLSPYLFIICVEGLS 60
Query: 431 LLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQ 490
+ A+ R + GVK+ R +THLLFADD F F + ++QE+ ++ +IL+ YE Q
Sbjct: 61 AQLKKAEARVDIHGVKLCRGALILTHLLFADDCFIFCKANMQESIKLKEILQSYEAMSEQ 120
Query: 491 AINLNKSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRL 550
AIN K I FS N S ++ FG+L+D +
Sbjct: 121 AINFRKPEI-FSKNTSE----------------------------ADRSQENFGYLRDGV 151
Query: 551 EKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEG 610
++I W + LS+AG+EVLIK + QAIPTYCMS F +P ++ +Q +N FWWG
Sbjct: 152 WRKIQQWFGKHLSKAGREVLIKFVTQAIPTYCMSTFLLPTTLGEEIQIMINSFWWGLNRR 211
Query: 611 GRRGIHWLAWERMCCSKREG 630
+GI WL+W+++ K G
Sbjct: 212 QGKGIDWLSWDKLTTRKEYG 231
>IMGA|Medtr2g111130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
26299553-26300277 H EGN_Mt090430 20090702
Length = 207
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 115/241 (47%), Positives = 144/241 (59%), Gaps = 35/241 (14%)
Query: 280 LKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNI 339
+K+ R ISLCNVLYK+ K QSAFV I DN +A E+IH++
Sbjct: 1 MKDLRLISLCNVLYKMFRKE----------------QSAFVEDHSILDNTLIATEIIHSV 44
Query: 340 KSRKNQ-RGACALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLN 398
K + N RG ALKIDISKAYDRV+ +LRG+++RMGF +L+N
Sbjct: 45 KRKTNGWRGELALKIDISKAYDRVDGGYLRGVLMRMGF------------------MLMN 86
Query: 399 GKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLL 458
VGPI PGRGLRQ DPLSPYLF+ AEGLS L A RG + GV+V P ++HLL
Sbjct: 87 FDRVGPIVPGRGLRQADPLSPYLFILVAEGLSTLIHKAVNRGGIHGVQVCCGAPLVSHLL 146
Query: 459 FADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILN 518
FADD F F ++ EA+ + ILK YE A GQ INL+KS +FFS NMS ++S I+
Sbjct: 147 FADDCFLFCRANVVEAQRLLTILKTYEVASGQEINLSKSEVFFSRNMSGAAQEDLSRIIG 206
Query: 519 V 519
V
Sbjct: 207 V 207
>IMGA|Medtr3g025680.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6753317-6752601 H EGN_Mt090430 20090702
Length = 238
Score = 196 bits (499), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 93/220 (42%), Positives = 142/220 (64%), Gaps = 1/220 (0%)
Query: 534 LIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSIC 593
+IG+SKK +F F++D++ ++I +W R LS+AGKEV+IKS Q+IPTY MS+F IP S+
Sbjct: 1 MIGRSKKDMFKFIKDQVWRKINSWGGRSLSKAGKEVMIKSALQSIPTYFMSIFLIPSSLG 60
Query: 594 VTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLM 653
++K MN FWWG +GI WL+W ++ KR GG GF++L+ FNMA+L KQ WRLM
Sbjct: 61 DEIEKMMNSFWWGNGGNRNKGIRWLSWYKLYVHKRSGGMGFKNLYMFNMALLGKQVWRLM 120
Query: 654 MEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGV 713
+P+ L ++LFKA+Y+ D +A +YVW+SIH A+ ++KQG RW++G + I V
Sbjct: 121 CQPELLIARLFKARYYQRNDIFEAKKGNNSSYVWKSIHEAIPMVKQGTRWKIGKKDKIRV 180
Query: 714 LSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDV 753
W+ ++ ++ + V+EL G+ WD+
Sbjct: 181 FQDRWL-MNGGLAQPAAQYNQLLQLNVKELLQPGQKSWDL 219
>IMGA|Medtr2g049290.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr02_pseudomolecule_IMGAG_V3
13465118-13466957 H EGN_Mt090430 20090702
Length = 509
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 135/526 (25%), Positives = 231/526 (43%), Gaps = 78/526 (14%)
Query: 53 LLHKRDVCIKE-MERWGRQFNKIFWKQKRILKQRIENARDGFDDV--TVQRLKNEWNTIL 109
+LH + C+K+ ++ W + F + I +Q + A+ D + ++ R + E + +
Sbjct: 3 VLHYKMKCLKQKLQVWNKTVVGNFHTKVYIAQQHLSEAQLAIDQMGFSIARSQVELDCMT 62
Query: 110 FKEECRM------RQIGKQRWLSWGDQNSKYFH--ASIKNRKRRAKILKLENEDGDIVQD 161
+ ++ K GD+N+ Y H A I+ + +LK +E + ++
Sbjct: 63 SYSQALNHLNSFWKEKSKTVRFLEGDRNTAYLHRQAKIREAQSYLSMLKHGDEILNRYEE 122
Query: 162 NDSLEQITLNYFSTVYSAEESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQP 221
N+ E+I + VT NN+L+ + +EI A F +
Sbjct: 123 NELPERI----------------------IPHLVTLEDNNMLSVVPSAEEIKRAIFGLNG 160
Query: 222 DKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLK 281
D SPGPDG + F+ FWH+IG D+ + + + L ++L+PK +L
Sbjct: 161 DSSPGPDGFSGHFYHCFWHIIGGDVVKSTQHFFLNNYIMPNLNSNLLILIPKVIGADTLD 220
Query: 282 EYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKS 341
+RPI+L N +KI+ K L +RL I II Q F+PGR I + + VA E+
Sbjct: 221 NFRPIALANFQFKIITKILGDRLGIIAAKIISTHQRGFIPGRSIQECIMVASEV------ 274
Query: 342 RKNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKE 401
FC+ W++ + + S+ +NGK
Sbjct: 275 ----------------------------------FCD----WIITILHSARLSININGKS 296
Query: 402 VGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFAD 461
VG + RG+RQGDPLSP LF E LS ++ RGR+ ++ R+ +H L+AD
Sbjct: 297 VGFFKCTRGVRQGDPLSPILFCIAEEVLSRGIEELVVRGRMTQIRATRSLYIPSHCLYAD 356
Query: 462 DSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAG 521
D F +G+L + + +L+ Y GQ IN KS F++ ++ + I ++ +
Sbjct: 357 DILIFCKGTLANVKNLMHLLEGYGNYSGQLINAQKSK-FYTGSIPLSKINAICSLTGFSQ 415
Query: 522 SIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGK 567
NYLG+ GK K + D+++ R+ W L+ G+
Sbjct: 416 GCIPLNYLGILLFKGKPKSIYLKPIVDKIQLRLNAWKGTLLTFMGR 461
>IMGA|Medtr2g088060.1 Polynucleotidyl transferase, Ribonuclease H fold
chr02_pseudomolecule_IMGAG_V3 19822787-19820648 H
EGN_Mt090430 20090702
Length = 612
Score = 177 bits (448), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 122/410 (29%), Positives = 182/410 (44%), Gaps = 37/410 (9%)
Query: 642 MAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGV 701
++ ++GWR E L +LFKA+YF N DF+ + + P+YVWRSI +A V+KQG
Sbjct: 105 LSKAGREGWRFQTESTNLVCRLFKARYFPNSDFIGSKIGHNPSYVWRSIFSAKIVVKQGA 164
Query: 702 RWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVREL-FVEGEGR-WDVGKVMTL 759
RWR+G+G I L PW+ S + + +P M+V+ F+E + + W + +L
Sbjct: 165 RWRIGSGVNIPFLGAPWLKDGLSLSITNP--IFEPLMQVKLCDFIEQDVKMWKAPLIHSL 222
Query: 760 FSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGK 819
F + IL P+ D+++W +K G YS++S Y + + H G W
Sbjct: 223 FDAQTAELILNTPLQPLVLEDKMIWKGEKNGTYSLKSAYRICVTEIADNSHMHVNGRWNL 282
Query: 820 MWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAK 878
+W L PK K F+WR R PT+ RL RGV + C C ED H ++ C K
Sbjct: 283 IWKLKVPPKIKKFLWRVCRGCFPTRARLNSRGVSCPLDCVHCNHNYEDSIHILIECPKVV 342
Query: 879 GVWRQGGY-------EVGDINISFTNF-FLQVLAHGDKIKSQHFLVYARYIWMARNNALW 930
VWR D NIS F LQ L+ G K + +W RN LW
Sbjct: 343 QVWRNANLWDTIDRVIHQDYNISALIFTLLQNLSSG---KCELMATIMWSLWKCRNMKLW 399
Query: 931 NNIRDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNTS-------RQRHAIF---PPGR 980
+T +A + W+ AQR +S S+ T RQ ++ PGR
Sbjct: 400 QQQLETDSQVLQRATHVLEEWQ---TAQRIRSSSSNQTITPQVRSLRQEEDVWKKPAPGR 456
Query: 981 LSNSGDQSWQAFVDGSIFEQEGMQGFGAVMESEEGIFIQAISGHFTGGMD 1030
++ +D S G G + ++G F+ A + F D
Sbjct: 457 --------YKCNIDASFSTSLNRVGLGMCLRDDDGAFVLARTKWFAHICD 498
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 67/96 (69%)
Query: 473 EAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLP 532
EA+ + +IL YE A GQAI+L KS +FFS + L I+ IL V +G G YLGLP
Sbjct: 16 EAQVMKNILHTYELASGQAISLPKSEVFFSTVVPLPLKETITNILGVRAVMGTGKYLGLP 75
Query: 533 SLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKE 568
S++G+SK+ FGF++DR+ +I +WS++ LS+AG+E
Sbjct: 76 SMVGRSKEATFGFIKDRIWHKINSWSSKCLSKAGRE 111
>IMGA|Medtr5g083870.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873812-31875697 H EGN_Mt090430 20090702
Length = 485
Score = 170 bits (431), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 140/541 (25%), Positives = 216/541 (39%), Gaps = 114/541 (21%)
Query: 505 MSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSR 564
MS +++ IL V +G G YLGL S+IG+SK F +++DR+ ++I +W R LS+
Sbjct: 1 MSHVAQEDLARILGVRLVLGTGKYLGLTSMIGRSKTTTFAYIKDRIWQKINSWRGRALSK 60
Query: 565 AGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMC 624
AGKEV+IK + Q+IP+Y MS++ +P ++ ++ +N F
Sbjct: 61 AGKEVMIKFVLQSIPSYIMSIYVLPRTVINDIEMMLNSF--------------------- 99
Query: 625 CSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPT 684
+ GW + P +L S++FKA+YF FLDA P+
Sbjct: 100 ---------------WWGGGGGNGGWNFLTNPPSLISQIFKARYFPITSFLDAKFGFNPS 144
Query: 685 YVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELF 744
Y WR I + +L +G RW +G+G I V+ PW+ +K +E
Sbjct: 145 YAWRIIWMSRQILSRGCRWSIGDGSHIRVMGDPWLCSGSQL------------LKTKE-- 190
Query: 745 VEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRL 804
W ++ + + D+++W + G+YSVRSGY++ R
Sbjct: 191 ------WA-------------HVVIQTSLFPSVQEDKVVWQEESNGLYSVRSGYHIVVRE 231
Query: 805 LRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCG-E 863
+ H R +PT+ L +R V C WC E
Sbjct: 232 VVPSTH--------------------------YRGCIPTRVNLNQRHVSCTNICLWCDYE 265
Query: 864 EEDINHAIVLCSKAKGVWRQGGYEV---GDINI--SFTNFFLQVLAHGDKIKSQHFLVYA 918
EE HA V C A+ W G V +N+ S + + V
Sbjct: 266 EETYWHAFVECEVARESWFSTGLSVVLLPRVNLFQSLSELIFYICCTESADAGGCIAVML 325
Query: 919 RYIWMARNNALWNNIRDTCYTTFLKAKEYMIS-WEHTKLAQRSMASESSNTSRQRHAIFP 977
+W A NN +WN+ RDT LK +S W+ KLAQ E S++ R + P
Sbjct: 326 WQLWAAHNNVVWNSSRDTP----LKIGRLALSNWQQRKLAQ-----EVSSSGRHVNTPLP 376
Query: 978 PGRLSNSGDQSWQAFVDGSIF---EQEGMQGFGAVMESEEGIFIQAISGHFTGGMDPFIA 1034
W S+F M +V+E E + +AI G D +
Sbjct: 377 VQVRWEKLTHRWMKCNVESVFVAGHSTKMSAHISVLEGEALVLQEAIQVAIAKGWDKVVF 436
Query: 1035 E 1035
E
Sbjct: 437 E 437
>IMGA|AC235669_13.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC235669.1 69436-68759 H EGN_Mt090430
20090702
Length = 225
Score = 169 bits (429), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 122/217 (56%)
Query: 193 PKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQ 252
P+++ + LTT DE+ F+M+ K+PGPDG P FF+ FW IGDDI R
Sbjct: 2 PRLSEQCRDSLTTLILKDEVGSTVFSMKSYKAPGPDGFQPIFFKHFWERIGDDIRRLVHT 61
Query: 253 WLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLII 312
+ G+ ++ T I L+PK NP LK +RPIS CNV++K++ K L +RL+ +L +I
Sbjct: 62 TFNMGSINASIAKTLIFLIPKKSNPQRLKNFRPISFCNVIFKLITKFLVSRLRPLLVDMI 121
Query: 313 DECQSAFVPGRLISDNVAVAFELIHNIKSRKNQRGACALKIDISKAYDRVNWEFLRGMML 372
QS+F+PGR I+DN +A E++H I ++G KID KAYDR NW+FL +
Sbjct: 122 SPLQSSFIPGRGITDNAILAQEVVHFIHHSHAKKGCIVSKIDHEKAYDRHNWDFLELTLH 181
Query: 373 RMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGR 409
GF + M CV SVL NG + P R
Sbjct: 182 GFGFPSTTISLNMSCVRSSNLSVLWNGVKTDHFTPSR 218
>IMGA|Medtr5g030050.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
12585358-12584747 H EGN_Mt090430 20090702
Length = 203
Score = 169 bits (428), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 126/201 (62%), Gaps = 1/201 (0%)
Query: 331 VAFELIHNIK-SRKNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVT 389
+ E++H++K S++++ ALK+ I K Y ++ +L+ +M ++ F +WV+W+M+CV
Sbjct: 2 IVIEVVHHMKISKRSRDKNVALKLYIGKGYVCIDRLYLKEVMQKLEFANRWVRWIMMCVE 61
Query: 390 DVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGR 449
YSV++N + VGPI GRGLRQGDPLSPYLF+ CAEG L + R + + +
Sbjct: 62 TDDYSVIVNNESVGPIFLGRGLRQGDPLSPYLFILCAEGHLALIHKGEWREDMHDISICT 121
Query: 450 NCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSREL 509
N P I+HLLFADD F FF + EA + IL+ YE QAINL KS ++++ N+S L
Sbjct: 122 NAPVISHLLFADDCFLFFWLNEIEAHMMKHILEIYEAVSSQAINLPKSEVYYNHNVSAPL 181
Query: 510 MTNISTILNVAGSIGGGNYLG 530
I+T L+V +G G YL
Sbjct: 182 KDFITTTLDVRAVMGTGKYLN 202
>IMGA|Medtr8g037100.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 7957038-7958530 H
EGN_Mt090430 20090702
Length = 410
Score = 169 bits (427), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 86/253 (33%), Positives = 138/253 (54%), Gaps = 3/253 (1%)
Query: 642 MAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGV 701
MAML KQGWR++ +PDTL ++++KA+YF +FL+A L P++VWRSI+ + +L+ G
Sbjct: 1 MAMLGKQGWRILTKPDTLIARIYKARYFPRCNFLEAELGHNPSFVWRSIYKSKFILRAGS 60
Query: 702 RWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFS 761
RW++G+G +I V ++ WM + + + D ++V + + + WDV + ++FS
Sbjct: 61 RWKIGDGMSISVWNNYWMKDNVTIFPLDDVATTLANLRVSDCLLPNQKSWDVPFLHSIFS 120
Query: 762 MREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMW 821
+ I+ P+ + DQ++W + YSVRS Y + L H G W +W
Sbjct: 121 EQIVEHIVATPLYSSVREDQLIWKKENNEEYSVRSAYRLCLNELLDTSHFKVEGAWDLVW 180
Query: 822 CLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCG-EEEDINHAIVLCSKAKGV 880
L P+ K+ +WR RN LPT++RLR +GV C C EEE H + C+ + +
Sbjct: 181 KLKVPPRVKNLIWRICRNFLPTRKRLRDKGVNCTTVCALCNLEEEGSMHLLFKCAGSMNI 240
Query: 881 WR--QGGYEVGDI 891
W Y V I
Sbjct: 241 WSMWNAYYSVNHI 253
>IMGA|Medtr3g097870.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
23554745-23554236 H EGN_Mt090430 20090702
Length = 169
Score = 167 bits (422), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 78/153 (50%), Positives = 102/153 (66%)
Query: 384 MMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQ 443
M +C+ V Y VL+NG+ VGPI P RGLRQGDPLSPYLF+ CAEGLS L + A+ RG +
Sbjct: 1 MTMCIESVNYQVLVNGESVGPINPKRGLRQGDPLSPYLFILCAEGLSALLRRAETRGDIH 60
Query: 444 GVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSP 503
GVKV R P +THLLFA D F F S+ + ++ ++L YE GQAI+ KS IFF
Sbjct: 61 GVKVCRGAPLLTHLLFAYDCFLFCRSSIMKCTKIKEVLHVYESVTGQAIHFEKSEIFFGK 120
Query: 504 NMSRELMTNISTILNVAGSIGGGNYLGLPSLIG 536
N S+ I +L V+ ++G G YLG+PS++G
Sbjct: 121 NTSQADRKAIKNLLQVSANMGNGKYLGMPSMVG 153
>IMGA|Medtr4g070130.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13557404-13554904 H EGN_Mt090430 20090702
Length = 447
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 133/241 (55%), Gaps = 44/241 (18%)
Query: 317 SAFVPGRLISDNVAVAFELIHNIKSRKNQRGA-CALKIDISKAYDRVNWEFLRGMMLRMG 375
S F+PGRLI DN +A E+I+++K K R LK+DISKAYDR++W +L+ +M++MG
Sbjct: 70 SDFIPGRLILDNAMIAIEVIYHMKISKRMRDKNVTLKLDISKAYDRIDWLYLKQIMVKMG 129
Query: 376 FCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQD 435
F W++W+M+CV V Y V++N + VGPI PGRG RQGDPLS YLF+ CA+
Sbjct: 130 FVTHWIRWIMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCAK-------- 181
Query: 436 AKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLN 495
D+ +EA + IL+ YE A GQAI+L
Sbjct: 182 -------------------------DE---------REANVMKHILETYEAASGQAISLP 207
Query: 496 KSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFG-FLQDRLEKRI 554
KS +++S ++ + I++IL IG YLGL +IG+S G FL RL +
Sbjct: 208 KSKVYYSRSVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQSAYFPHGDFLSSRLGANL 267
Query: 555 G 555
G
Sbjct: 268 G 268
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 665 KAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHS 724
++ YF + DFL + L +V RSI +A V+KQG RWR+G+G TI +LS PW+ + S
Sbjct: 249 QSAYFPHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPWLKDECS 308
Query: 725 FWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMW 784
+++ +KV+++ W+ + LF + IL + D+++W
Sbjct: 309 LTMDNPMYVPLSHVKVQDITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVHEDKLIW 368
Query: 785 HWDKKG 790
+K G
Sbjct: 369 KVEKNG 374
>IMGA|Medtr4g069720.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
13373662-13371162 H EGN_Mt090430 20090702
Length = 447
Score = 163 bits (412), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 94/241 (39%), Positives = 133/241 (55%), Gaps = 44/241 (18%)
Query: 317 SAFVPGRLISDNVAVAFELIHNIKSRKNQRGA-CALKIDISKAYDRVNWEFLRGMMLRMG 375
S F+PGRLI DN +A E+I+++K K R LK+DISKAYDR++W +L+ +M++MG
Sbjct: 70 SDFIPGRLILDNAMIAIEVIYHMKISKRMRDKNVTLKLDISKAYDRIDWLYLKQIMVKMG 129
Query: 376 FCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQD 435
F W++W+M+CV V Y V++N + VGPI PGRG RQGDPLS YLF+ CA+
Sbjct: 130 FVTHWIRWIMMCVEIVDYFVIVNNESVGPIFPGRGFRQGDPLSLYLFILCAK-------- 181
Query: 436 AKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLN 495
D+ +EA + IL+ YE A GQAI+L
Sbjct: 182 -------------------------DE---------REANVMKHILETYEAASGQAISLP 207
Query: 496 KSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFG-FLQDRLEKRI 554
KS +++S ++ + I++IL IG YLGL +IG+S G FL RL +
Sbjct: 208 KSKVYYSRSVPGHVQDFITSILGDCTLIGTIKYLGLTFMIGQSAYFPHGDFLSSRLGANL 267
Query: 555 G 555
G
Sbjct: 268 G 268
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 65/126 (51%)
Query: 665 KAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHS 724
++ YF + DFL + L +V RSI +A V+KQG RWR+G+G TI +LS PW+ + S
Sbjct: 249 QSAYFPHGDFLSSRLGANLGFVLRSIFSAKMVVKQGARWRIGSGATIPLLSTPWLKDECS 308
Query: 725 FWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMW 784
+++ +KV+++ W+ + LF + IL + D+++W
Sbjct: 309 LTMDNPMYVPLSHVKVQDITEPSTKVWNTTVISNLFDHNTTQLILNTHLQPLVHEDKLIW 368
Query: 785 HWDKKG 790
+K G
Sbjct: 369 KVEKNG 374
>IMGA|Medtr3g019330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
3889810-3888042 H EGN_Mt090430 20090702
Length = 489
Score = 162 bits (410), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 141/292 (48%), Gaps = 31/292 (10%)
Query: 570 LIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKRE 629
+IKS+ QAI +Y MS+F++P ++ T+++ MN FWWG + I+WL+WE++ K
Sbjct: 1 MIKSVLQAIMSYVMSLFQLPTTLITTIERMMNSFWWGHDRSTHQSINWLSWEKLSMHKSH 60
Query: 630 GGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRS 689
GG GF+DL FN+AML KQGW+ + + ++L + F
Sbjct: 61 GGMGFKDLSAFNLAMLGKQGWKFLSDTNSLVTPRF------------------------- 95
Query: 690 IHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEG 749
+++ RW + +G ++ +L P + S + F KV+ L E
Sbjct: 96 ------IVRGRARWSISSGVSLPILDAPLLSNGESIDGSITEGFYVRDFKVQSLISEHGK 149
Query: 750 RWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRV 809
R +V V +FS AIL P+ +D+++W ++ G Y+VRS Y + L
Sbjct: 150 RRNVPLVRQVFSNDIVDAILNTPLYDQVHQDRLIWKAERNGCYTVRSAYRLCVEKLMDVS 209
Query: 810 HEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWC 861
+ G W +W L PK K+ + R R LPT+ RL+ +GV C C
Sbjct: 210 YLHRPGSWNNIWRLKVPPKVKNLLVRMCRGCLPTRARLQDKGVSCPTNCGSC 261
>IMGA|Medtr8g105650.1 reverse transcriptase, putative;
100033-105622, related chr08_pseudomolecule_IMGAG_V3
23385469-23384651 H EGN_Mt090430 20090702
Length = 244
Score = 157 bits (397), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 89/268 (33%), Positives = 141/268 (52%), Gaps = 29/268 (10%)
Query: 531 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPL 590
+P+ G+SK+ F F+ DR+ K++ W + LS G+ LI+++AQAIPTY MS F +P
Sbjct: 1 MPTHFGRSKEHDFHFIMDRIWKKLKGWKEKSLSFEGRGTLIRAVAQAIPTYVMSCFLLPK 60
Query: 591 SICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGW 650
+C ++K + FWWG + ++ IHW E + + +GG GF+ L FNMAMLAKQ
Sbjct: 61 GLCEKIEKVVCAFWWGGTD-SKKKIHWTKRENLFKPRHKGGMGFKILRDFNMAMLAKQ-- 117
Query: 651 RLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGET 710
A L P+Y WRSI ++ V+++G W++GNG+
Sbjct: 118 --------------------------ANLGYSPSYAWRSIFHSIWVIQKGSCWKIGNGQK 151
Query: 711 IGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILG 770
+ + W+P H+F + + V++L E W+ + T F + I
Sbjct: 152 VRIWEDNWIPTHHNFRIFTPNLGNPDVVLVKDLTNMDEPSWNNSILNTHFLSIDKDQIEC 211
Query: 771 IPISINASRDQIMWHWDKKGIYSVRSGY 798
IP+ A+ D+IMWH+++ G Y+V SGY
Sbjct: 212 IPLINLANDDEIMWHFNQDGKYTVHSGY 239
>IMGA|Medtr2g111140.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
26300425-26300964 H EGN_Mt090430 20090702
Length = 179
Score = 155 bits (393), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 112/179 (62%), Gaps = 1/179 (0%)
Query: 570 LIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKRE 629
+IK + Q+IP+Y MS++ +P S+ ++K +N FWWG + RGI W+AWER+ C K
Sbjct: 1 MIKYVLQSIPSYIMSIYLLPNSVIDDIEKMINAFWWGGRSN-NRGIKWMAWERVACPKEF 59
Query: 630 GGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRS 689
GG FR+ FN+AM+AKQGW + +PD+L +++FK++YF FL A L P++ WRS
Sbjct: 60 GGMRFRNFKAFNIAMVAKQGWSFLSKPDSLVARIFKSRYFPRSSFLGAKLGNNPSFAWRS 119
Query: 690 IHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGE 748
I + +L G RW +G+G+ + V++ PW+ H W++ + ++ V +L + E
Sbjct: 120 IWNSCQLLLYGCRWTIGDGQQVSVMNDPWVRGVHGSWIQSPQGQDVHSLPVSDLIADEE 178
>IMGA|Medtr3g044190.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
12265782-12266442 H EGN_Mt090430 20090702
Length = 195
Score = 152 bits (384), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 67/174 (38%), Positives = 110/174 (63%)
Query: 583 MSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNM 642
MS+F +P S+C ++K MN FWWG R+GIH ++W+++ K++GG F+ L FNM
Sbjct: 1 MSLFTLPSSLCDEIEKMMNSFWWGHSGSHRKGIHRMSWDKLSMHKKDGGMSFKSLGTFNM 60
Query: 643 AMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVR 702
AML KQGWR++ +PDTL ++++KA+YF +FL+A L P++VWRSI + +L+ G R
Sbjct: 61 AMLGKQGWRILTKPDTLIARIYKARYFPRCNFLEAELGHNPSFVWRSICKSKFILRAGSR 120
Query: 703 WRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKV 756
W++G+G +I V ++ WM + + + D ++V + + + WD K
Sbjct: 121 WKIGDGTSISVWNNYWMKDNVTIFPLDDVATTLANLRVSDCLLPNQKSWDCVKT 174
>IMGA|Medtr7g068060.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr07_pseudomolecule_IMGAG_V3
13863857-13863375 E EGN_Mt090430 20090702
Length = 116
Score = 147 bits (372), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/112 (59%), Positives = 83/112 (74%)
Query: 355 ISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQG 414
+SKAYDR+NWE+LR +MLR+GF KW W+M+CV VKY VL+N + GPI PG GLR+G
Sbjct: 1 MSKAYDRINWEYLRRVMLRLGFDAKWFGWIMMCVESVKYKVLVNQESEGPILPGSGLRKG 60
Query: 415 DPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFF 466
DPLSPYLF+ CA+GL+ L A+ RG L GV+V P+ THLLF DD F F
Sbjct: 61 DPLSPYLFILCAQGLTSLIDKAEGRGDLHGVRVCTGAPTFTHLLFVDDCFLF 112
>IMGA|Medtr4g021840.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 4275704-4277642 H
EGN_Mt090430 20090702
Length = 171
Score = 145 bits (367), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 66/146 (45%), Positives = 101/146 (69%)
Query: 439 RGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSG 498
+G + G+K R P+++HLLFADD F F + E + + IL++YE A GQ +NL KS
Sbjct: 7 KGDIPGIKNFRRGPAVSHLLFADDCFIFCRAKVNEVQHLISILREYEEASGQQVNLAKSE 66
Query: 499 IFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWS 558
+FF NMS+ +++ IL V ++G G YLGLPS++G+SKK FG+++D++ ++I +W
Sbjct: 67 VFFGNNMSQAAKQDLANILGVKHALGTGTYLGLPSMVGRSKKATFGYIKDKIWRKINSWR 126
Query: 559 NRFLSRAGKEVLIKSIAQAIPTYCMS 584
R LS++GKE +IKS+ Q IP+Y MS
Sbjct: 127 GRSLSKSGKETMIKSVLQLIPSYIMS 152
>IMGA|Medtr4g160830.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 40910518-40909919 H
EGN_Mt090430 20090702
Length = 199
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 112/197 (56%), Gaps = 1/197 (0%)
Query: 548 DRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGK 607
DR+ K++ W + LS G+ VLI+++ Q IPTY MS F +P +C +++ + FWWG
Sbjct: 2 DRIWKKLKGWKEKSLSFEGRGVLIRAVTQVIPTYYMSCFLLPKGLCEKIERVVCSFWWGS 61
Query: 608 KEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAK 667
++ IHW E + K +GG F+ L FN+AMLAKQ WR +TL +K FK+K
Sbjct: 62 -TNTKKKIHWKNKEILFKFKHDGGMVFKSLRDFNIAMLAKQVWRFHTNLNTLIAKCFKSK 120
Query: 668 YFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWV 727
Y+ + D L+A L P Y WRSI A+ + +G WRVG G+ I + W+P HS V
Sbjct: 121 YYPHTDILEADLGNNPNYAWRSIQNAIWPILKGSCWRVGKGDNIRIWDDNWIPTYHSLRV 180
Query: 728 EDSRDFVDPTMKVRELF 744
+ + KV++L
Sbjct: 181 LNPKRNNPHINKVKDLI 197
>IMGA|Medtr1g122150.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26788772-26788104 H EGN_Mt090430 20090702
Length = 222
Score = 143 bits (361), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 111/221 (50%), Gaps = 5/221 (2%)
Query: 644 MLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRW 703
MLAKQ WR +P +L S+ FKAKYF D L APL P+Y WRSIH ++ V+ +G W
Sbjct: 1 MLAKQVWRFHTKPHSLISRCFKAKYFPQSDILQAPLGCNPSYAWRSIHNSIWVILKGSCW 60
Query: 704 RVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMR 763
++GNGE+ V W+PL + F + + V++L WD + LF
Sbjct: 61 KIGNGESAKVWGDNWVPLHNGFKILTQKMEPFSIRHVKDLINMDSFSWDTEILNNLFLPI 120
Query: 764 EFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVAR-----RLLRGRVHEVDGGWWG 818
+ I IPI + D+ MW + G+Y+V+SGY + + D W
Sbjct: 121 DKDHIEQIPIINTTNIDEYMWMHEPTGVYTVKSGYKAIKEWQDQQFSSTASSSCDTQVWK 180
Query: 819 KMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCP 859
K+W + P+ K +WR L+N LP + L RGV I CP
Sbjct: 181 KLWAIHTIPRHKVLLWRILQNSLPVRSELSNRGVPCSILCP 221
>IMGA|Medtr5g088270.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34195188-34196556 H EGN_Mt090430 20090702
Length = 307
Score = 142 bits (359), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 88/138 (63%)
Query: 583 MSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNM 642
MSVF +P ++ ++K +N FWWG RRGIHWL+ ++ K GG GF+DL FN+
Sbjct: 1 MSVFLLPTTLVDQIEKMINGFWWGNGGSNRRGIHWLSCNKLRVHKNHGGMGFKDLTAFNL 60
Query: 643 AMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVR 702
AML KQGW+ + + L SKLFKA+YF D+L A L ++VWRSI++A V + GVR
Sbjct: 61 AMLGKQGWKFQFQSECLVSKLFKARYFPQSDYLGAKLGHNLSFVWRSIYSARRVARSGVR 120
Query: 703 WRVGNGETIGVLSHPWMP 720
W++GN I + PW+
Sbjct: 121 WKIGNSVNIPIFDAPWLA 138
>IMGA|Medtr5g009520.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
2111344-2110511 H EGN_Mt090430 20090702
Length = 277
Score = 140 bits (352), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 137/271 (50%), Gaps = 17/271 (6%)
Query: 22 YRRFRFDNSWVGERELDQLVKDVWCNNDSEPLLHKRDVCIKEMERWGRQFNKIFWKQKRI 81
+ RF F+N+W+ + + V + W + + K +C+ ++ W R
Sbjct: 14 HNRFMFENAWLIDPKFHNFVCNKWHSYGENDISAKSSMCVADISLWNRN-------HFLH 66
Query: 82 LKQRIENARDGFDDVTVQ----------RLKNEWNTILFKEECRMRQIGKQRWLSWGDQN 131
LK I+N R D V Q L+ + +L KE+ RQ K W GD N
Sbjct: 67 LKHDIDNCRRKLDCVLSQVHAGNIKYFNALRKCMSHLLAKEDTFWRQRAKTHWFREGDLN 126
Query: 132 SKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEESVGIEIFNLV 191
+++FHA+ +R++ + L N ++D+ L + +YF+ ++ ++ + + +
Sbjct: 127 TRFFHAAATSRRKINCLTSLVNTPSTRIKDSLVLCSVPRDYFAEIFHKPINILYPVLDAI 186
Query: 192 QPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCK 251
P ++ N LTT FT+DE +A F+M+ DK GP NP F+Q FW +IG +I+++
Sbjct: 187 NPSISEDANTNLTTLFTIDEFRDAMFSMKLDKYLGPGRFNPDFYQYFWPLIGQEIFQESY 246
Query: 252 QWLDTGTFPKTLTDTHIVLLPKCDNPLSLKE 282
WL TGTF TL T+I L+PK D +S+K+
Sbjct: 247 SWLTTGTFLSTLNLTNIALIPKDDGQISMKD 277
>IMGA|Medtr5g029030.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
12035165-12036141 H EGN_Mt090430 20090702
Length = 250
Score = 139 bits (351), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 129/244 (52%), Gaps = 13/244 (5%)
Query: 627 KREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYV 686
K GG GFR FN+AML KQGW+L+ DT+ ++++KAKY+ N FL A L +Y+
Sbjct: 3 KEYGGMGFRHFFGFNLAMLGKQGWKLLTNQDTIVARIYKAKYYPNTYFLGARLGHNQSYI 62
Query: 687 WRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVE 746
WRSI A +++ G RWR+GNG+ I V + PW+ D + V +R +KV +L
Sbjct: 63 WRSIFALQVLVRGGQRWRIGNGKNIAVWTDPWLREDKNSVVSSTRVQGTENLKVADLMDS 122
Query: 747 GEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGY-YVARRLL 805
W+ G + LF+ ++ AI + ++ D+ +W ++ +G Y+V+S Y Y L+
Sbjct: 123 NGVTWNWGLIAALFNEQDKAAIAKLALTNREGEDKRIWKFNSQGFYTVKSAYRYAMETLI 182
Query: 806 RGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVD--IGCPWCGE 863
+ V W KM + + K F+WR LR+ GV++ + C WC +
Sbjct: 183 DNEEYRVPRE-WLKMLKMQIPQRIKVFLWRVLRD---------SEGVDLAMILWCLWCRQ 232
Query: 864 EEDI 867
+ +
Sbjct: 233 NDKV 236
>IMGA|Medtr3g024790.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
6317912-6319402 H EGN_Mt090430 20090702
Length = 456
Score = 137 bits (346), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 122/501 (24%), Positives = 206/501 (41%), Gaps = 78/501 (15%)
Query: 394 SVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPS 453
S+ +NG + G + RG+RQGDPLSP LF E LS G+++ +K R+
Sbjct: 2 SISINGSQRGYFKCARGVRQGDPLSPLLFCSAEEVLSRGILKLVDDGKVELIKASRDTQI 61
Query: 454 ITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIFFSPNMSRELMTNI 513
+H +ADD + +G L E + D+ +Y GQ INL KS I FS +S ++
Sbjct: 62 PSHCFYADDLMVYCKGKLYSLEALKDLFTRYASCSGQVINLGKSFI-FSGGVSNNML--- 117
Query: 514 STILNVAG-SIGGGN--YLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVL 570
ST++N+ G +IG + YLG P GK F + D+++ ++ +W LS AG+ L
Sbjct: 118 STMVNLLGFNIGSLSFTYLGAPIFKGKPNTIHFQPIADKIKLKLASWKAYLLSIAGRVQL 177
Query: 571 IKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREG 630
+KS+ Q + +R+C E
Sbjct: 178 VKSVVQGM-----------------------------------------MKRVCADLDER 196
Query: 631 GRGFRDLHCFNMAMLAKQGWRLMMEPDT----LFSKLFKAKY-FHNRDFLDAPLSRRPTY 685
G + L C + A K W ++ +T + S+ + Y H+ + +
Sbjct: 197 RLGTKSLICLSEATNLKLCWDVLHSNETWAVIIRSRTLRGTYCIHHHIY---------SS 247
Query: 686 VWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWM--PLDHSFWVEDSRDFVDPTMKVREL 743
+ I +K+ W V NG+ I W PL + + S + + +
Sbjct: 248 IRSGIKQEFNTIKENTSWLVENGDNIQFWLDSWCRKPLIQA--LNLSLNQIQNLPQCISS 305
Query: 744 FVEGEGRWDVGKVMTLFSMREFRAILG-IPISINASRDQIMWHWDKKGIYSVRSGYYVAR 802
+++ +WD + L +M + R ++ + I + D+++W G S++ Y
Sbjct: 306 YIQN-NQWDTPNEL-LHAMPDLRRLVTQVTIPVQQKEDELIWCHSTNGTLSMKEVY---- 359
Query: 803 RLLRGRVHEVDGGWWGKM-WCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWC 861
+ H W K+ W D P +WR + N LPT E L RG + C C
Sbjct: 360 ---ESKKHHYPKRKWAKLIWSKDYPPSKYLMVWRLMLNKLPTNENLTERGCNLPSMCSLC 416
Query: 862 GEE-EDINHAIVLCSKAKGVW 881
++ E+ H C + +W
Sbjct: 417 SKQSENSFHLYFECPYSFNIW 437
>IMGA|Medtr4g159480.1 Endonuclease/exonuclease/phosphatase
chr04_pseudomolecule_IMGAG_V3 40245955-40247247 H
EGN_Mt090430 20090702
Length = 395
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/257 (33%), Positives = 135/257 (52%), Gaps = 27/257 (10%)
Query: 4 SDHAPLFIQL--NYRQVDNNYRRFRFDNSWVGERELDQLVKDVWCNNDSEPLLHKRDVCI 61
SDH P+ + + + RQ+ +NY F+F+NSW+ L+++V D W L + C
Sbjct: 163 SDHTPILLDIVPSVRQM-HNYS-FKFENSWL----LEEVVVDGWGGTTGLELGDRVVNCS 216
Query: 62 KEMERWGRQFNKIFWKQKRI-LKQRIENARDGFDDVTVQRLKNEWNTILFKEECRMRQIG 120
+++ WGR+ KR+ K+ I +++ ++ EE +Q
Sbjct: 217 TKLQSWGRR--------KRVRFKEEINQCVRILEELRASQM----------EEAFWKQRV 258
Query: 121 KQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAE 180
K WL GD N+K+FH S R + K+ KL +DG + + + +YF ++SA
Sbjct: 259 KMHWLKEGDINTKFFHTSAIARGKVKKVSKLRTDDGITDTTQEDMCNVAQSYFEQLFSAN 318
Query: 181 ESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWH 240
V + +L+ V+ N ILT+P T E+ +A F MQPDKSPGP+G N AF+Q+FW+
Sbjct: 319 AGVHEPVLDLMNKCVSIDDNIILTSPITKQELRQALFQMQPDKSPGPNGFNQAFYQRFWY 378
Query: 241 VIGDDIWRDCKQWLDTG 257
V GDDI++ WLD G
Sbjct: 379 VCGDDIFQAVVSWLDRG 395
>IMGA|Medtr4g129960.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
31059249-31058149 H EGN_Mt090430 20090702
Length = 344
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 132/260 (50%), Gaps = 11/260 (4%)
Query: 696 VLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGK 755
VL +G RWR+G+G I V+ PW+ +H W+ ++ + + +L +EG WDV K
Sbjct: 2 VLLRGCRWRIGDGTQIRVMHDPWLRNEHGGWLASPQNQDVYDLFLADLMIEGGKEWDVDK 61
Query: 756 VMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYV-ARRLLRGRVHEVDG 814
+ L S ++L P+ + DQ++W ++ G+YSV++GY + AR ++ ++V G
Sbjct: 62 IFDLLSFESANSVLKTPLFPSVQDDQVIWQEEQNGVYSVKTGYRIDARDVVPASQYQVRG 121
Query: 815 GWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVL 873
W K+W + + PK ++ +WR +PT+ +L R V CPWCG E + + HA +
Sbjct: 122 D-WNKLWKVCSPPKARNLLWRICPGCIPTRVKLVHRQVPCAYLCPWCGLEAETDWHAFIG 180
Query: 874 CSKAKGVWRQGGYEVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNI 933
C+ AK W G + F + + + L++ IW ARN+ +WN
Sbjct: 181 CTIAKESWSFAGLSELLHELVFN---ICSCESANAVGRGAVLLWQ--IWSARNDVVWN-- 233
Query: 934 RDTCYTTFLKAKEYMISWEH 953
DTC T+ +I W+
Sbjct: 234 -DTCETSITIGGLAVIGWQQ 252
>IMGA|Medtr1g117580.1 hypothetical protein
chr01_pseudomolecule_IMGAG_V3 25273871-25275952 H
EGN_Mt090430 20090702
Length = 663
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 104/182 (57%)
Query: 629 EGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWR 688
G F+ L FN+AML KQGWR++ PDTL +K++KA+YF +FL+A + +P++VWR
Sbjct: 476 NGSMSFKSLGTFNLAMLGKQGWRILTNPDTLIAKIYKARYFSRCNFLEATIGHKPSFVWR 535
Query: 689 SIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGE 748
SI + +LK G RW++GNG +I V ++ WM + + + + ++V + +
Sbjct: 536 SICNSKFILKAGSRWKIGNGTSIPVWNNYWMKDNVTLYPLEDVASTLANLRVSDCILPNH 595
Query: 749 GRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGR 808
W++ + ++F+ + I+ P+ + D+++W + G YSVRS Y++ L
Sbjct: 596 KSWNLPFLHSVFNHQVVEHIINTPLFPSVHEDRLIWKKENNGEYSVRSAYHLCMNELLDT 655
Query: 809 VH 810
H
Sbjct: 656 SH 657
>IMGA|Medtr4g084360.1 Putative ribonuclease H protein At1g65750,
chr04_pseudomolecule_IMGAG_V3 17721962-17723166 E
EGN_Mt090430 20090702
Length = 188
Score = 122 bits (306), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 64/166 (38%), Positives = 96/166 (57%), Gaps = 19/166 (11%)
Query: 499 IFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWS 558
I FS N++ +NI IL + G YLG+P+ +GKSK+Q
Sbjct: 42 IIFSKNVADIEQSNIIQILGMKKVEGFSKYLGVPTHMGKSKRQ----------------- 84
Query: 559 NRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWL 618
+ LS AG+ LIK+++QAIPTY MS F +P + C + + + FWWG +R HW+
Sbjct: 85 -KHLSFAGRSTLIKAVSQAIPTYIMSGFLLPKNFCQQLDRVICDFWWGSNTDSKR-THWI 142
Query: 619 AWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLF 664
WE++C +K+ GG GFR+L FN+A+LAKQ WR+ + +L +K+
Sbjct: 143 KWEKLCKAKKNGGLGFRNLRAFNIALLAKQIWRIQTQNQSLMAKVL 188
>IMGA|Medtr2g114260.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 26977303-26977923 H
EGN_Mt090430 20090702
Length = 178
Score = 122 bits (306), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 68/199 (34%), Positives = 106/199 (53%), Gaps = 29/199 (14%)
Query: 515 TILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSI 574
+IL + S YLG+ + G+SK+Q F FL+DR+ K++ W + +S G+ LI+++
Sbjct: 9 SILPIKISTSIQKYLGITTHFGRSKEQDFNFLKDRIWKKLKGWKEKSVSFEGRAFLIRAV 68
Query: 575 AQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGF 634
AQAIPTY MS F +P +C ++K + FWWG E ++ +HW E + SK EGG GF
Sbjct: 69 AQAIPTYIMSCFLLPKGLCSRIEKVVCFFWWGSTEHKKK-MHWTKREHLFKSKLEGGMGF 127
Query: 635 RDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAM 694
+ L FN+A L KQ + + WRSI+ A
Sbjct: 128 KILRGFNLAKLTKQ----------------------------VNIGSNSNFAWRSIYNAK 159
Query: 695 GVLKQGVRWRVGNGETIGV 713
V+++G WR+GNG+++ +
Sbjct: 160 WVIQKGSCWRIGNGQSVNI 178
>IMGA|Medtr5g013050.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
3891819-3892634 H EGN_Mt090430 20090702
Length = 213
Score = 114 bits (286), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 121/257 (47%), Gaps = 58/257 (22%)
Query: 300 LANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSR-KNQRGACALKIDISKA 358
+NRL+ ++ I + FV R I +N AFE++H + + K + G LK+DI K
Sbjct: 10 FSNRLRPLIRKYISLEHTTFVTSRSIMNNALSAFEILHFMCCKHKGKIGDVVLKLDIPKT 69
Query: 359 YDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLS 418
+D VNW +L+ +++ M FC +W+QW L+G + P P+S
Sbjct: 70 FDTVNWSYLQDVVIIMDFCTRWLQWK------------LHGIHICHKTP--------PIS 109
Query: 419 PYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVN 478
LF ADD+ F + + EA +
Sbjct: 110 YLLF-------------------------------------ADDNVHFCKTFVSEAPCLK 132
Query: 479 DILKKYERALGQAINLNKSGIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKS 538
+I+ E A G+ IN +K GI FS N+SR ++ +IS++L V SIGGG YLGLPS++ S
Sbjct: 133 NIISDIEAASGKTINFDKLGISFSKNISRNVVNSISSLLGVNESIGGGEYLGLPSMVRHS 192
Query: 539 KKQVFGFLQDRLEKRIG 555
K +F Q + +++
Sbjct: 193 NKIIFQLPQCKSMEKVS 209
>IMGA|Medtr2g100330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23354620-23355450 H EGN_Mt090430 20090702
Length = 276
Score = 109 bits (273), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 124/272 (45%), Gaps = 25/272 (9%)
Query: 538 SKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQ 597
SK ++ F ++ + +R+ +W + L++ G+ L+KS+ +IP Y M V +P S C ++
Sbjct: 4 SKGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESID 63
Query: 598 KRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPD 657
+ F W R I+ + WE++ K+ GG R N ++L + WRL D
Sbjct: 64 RLAINFLWKGSSNFR--IYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCD 121
Query: 658 TLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVG---------NG 708
+L+ K+ KYFH L + + W +I A L+ G +R+G N
Sbjct: 122 SLWVKVLTHKYFHADKLLTVT-RKSGSVTWNAIMKARFTLRDGFDFRLGDDNSSFWFVNW 180
Query: 709 ETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAI 768
IG L+ + + D D ++V+++FV G W+ + T ++
Sbjct: 181 SGIGKLTEKVLYV----------DIHDLNLRVKDVFVNGA--WNFNHIYTTLPASITDSL 228
Query: 769 LGIPISINAS-RDQIMWHWDKKGIYSVRSGYY 799
+PI +N+ D W + GIYS GYY
Sbjct: 229 KILPICLNSRVTDGYTWKGNLHGIYSAEDGYY 260
>IMGA|Medtr3g024330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5982582-5983034 H EGN_Mt090430 20090702
Length = 150
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 72/108 (66%)
Query: 570 LIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKRE 629
+IK I Q+IPTY +S+F IP S+ ++K MN FWW +GI WL+W+++ KR
Sbjct: 1 MIKYILQSIPTYFISIFLIPSSLGDEIEKIMNYFWWENGGNRNKGIRWLSWDKLYVHKRS 60
Query: 630 GGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDA 677
G GF++L+ FNMA+ KQ WRLM +P+ L ++LFKA+Y+ D +A
Sbjct: 61 RGMGFKNLYMFNMALHDKQVWRLMCQPELLVARLFKARYYRRNDIFEA 108
>IMGA|Medtr6g061920.1 RNA-directed DNA polymerase (Reverse
transcriptase); Deoxyribonuclease I
chr06_pseudomolecule_IMGAG_V3 11215607-11213885 H
EGN_Mt090430 20090702
Length = 405
Score = 106 bits (264), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 121/281 (43%), Gaps = 28/281 (9%)
Query: 118 QIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVY 177
Q + WL D NSK+FH + R+R +L +E DG + + N+F Y
Sbjct: 144 QKSRLNWLREDDANSKFFHGIMSARRRGNALLFIE-VDGTRFEGVTNFRGAVFNHFQHHY 202
Query: 178 SAEESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQK 237
+ ++ + LT F EI A ++ KSPG +G++ F +
Sbjct: 203 KSIYITRPSADDMAFKTMYVEDGGSLTGLFLEGEIKHAVWSCDSYKSPGANGISLNFIKD 262
Query: 238 FWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVA 297
FW ++ D+ R + K + T I L+PK
Sbjct: 263 FWGLLKGDMIRFFNDFHRHDRLSKGINSTFIALIPKV----------------------- 299
Query: 298 KSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSRKNQRGACALKIDISK 357
L NRL+ I+ +I Q+ FV G I D + +A EL+ + RK + K+D K
Sbjct: 300 --LVNRLQNIIGSVISPSQTTFVSGCQILDGLLIANELVDDACKRK--QDLLLFKVDFEK 355
Query: 358 AYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLN 398
A+D V+W++L M+ RM F W +WM C++ SVL+N
Sbjct: 356 AFDSVDWKYLHTMLRRMNFPRLWCKWMWECISTPFVSVLVN 396
>IMGA|AC146793_2.1 RNA-directed DNA polymerase, related AC146793.7
10132-10811 E EGN_Mt090430 20090702
Length = 170
Score = 105 bits (263), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 61/183 (33%), Positives = 89/183 (48%), Gaps = 28/183 (15%)
Query: 618 LAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDA 677
++ E++ GG F+DL F MAML KQGWR +P +L S+LFKA+YF N F+ +
Sbjct: 1 MSLEKLSVHNCFGGMRFKDLTSFIMAMLGKQGWRFQTDPTSLVSRLFKARYFSNSSFIQS 60
Query: 678 PLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPT 737
+ P+YV+RSI +A ++K W VG+G I L PW L + + +P
Sbjct: 61 SIGHNPSYVYRSIFSAKIMVKHDALWPVGSGANIPFLGAPW--LKDGLSLSTTNSIFEP- 117
Query: 738 MKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSG 797
LF+ R IL P+ + D+++W DK G Y VRS
Sbjct: 118 ---------------------LFAQR----ILNTPLQHLVTEDKLIWKGDKSGKYFVRSA 152
Query: 798 YYV 800
Y +
Sbjct: 153 YRI 155
>IMGA|Medtr7g021160.1 Ribonuclease H chr07_pseudomolecule_IMGAG_V3
5113686-5112454 H EGN_Mt090430 20090702
Length = 410
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 119/286 (41%), Gaps = 18/286 (6%)
Query: 768 ILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEV------DGGWWGKMW 821
I IPI ++D++MW ++ GIYSV+SGY R + H + W K+W
Sbjct: 14 IEQIPIINTTNQDELMWMYELNGIYSVKSGYQAIRSWQIQQKHNTTPNCSSETTVWKKLW 73
Query: 822 CLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGV 880
L P+ K +WR L N LP + L +RG+ I CP C + E I H + C
Sbjct: 74 KLHTIPRHKVILWRILHNSLPVRSELNKRGIHCSILCPRCNSKMETITHTFMTCPNILRT 133
Query: 881 WRQGGYEV---GDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTC 937
W + N +F N+ + H D+ IW +RN +++ N
Sbjct: 134 WFGSSLTIKFPDQPNPNFVNWLFDFILHEDEQIIIQTAAIIYSIWFSRNLSIFENKTLPE 193
Query: 938 YTTFLKAKEYMISWE---HTKLAQRSMASESSNTSRQRHAIFPPGRLSNSGD--QSWQAF 992
L+A+ + ++ T Q + SSN S + +NS + F
Sbjct: 194 EDIILRAEHSIQEYKAATKTDPGQADSMTRSSNASTTHNNSTACTTHNNSTKWRRPETGF 253
Query: 993 VDG---SIFEQEGMQGFGAVMESEEGIFIQAISGHFTGGMDPFIAE 1035
V + + G G GA++ EEG+ + A + GG D +AE
Sbjct: 254 VKANGDANLKYAGSWGIGAIIRDEEGLVMAAATWKVNGGEDTLMAE 299
>IMGA|AC233676_33.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233676.2 127681-128151 H
EGN_Mt090430 20090702
Length = 156
Score = 103 bits (258), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 83/141 (58%)
Query: 203 LTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKT 262
LT PFT++ + + ++ K P PDG+N +F + FW + DD R ++ G +
Sbjct: 10 LTKPFTVEVVMQVVWDCDRYKIPRPDGINLSFIKDFWPKLQDDFMRFISEFHRNGKLSRG 69
Query: 263 LTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPG 322
+ +T I L+PK ++ L ++RPIS+ LYK+++K + NRL + +P II E QSAF+ G
Sbjct: 70 INNTFIALIPKVESSQRLNDFRPISMVESLYKVISKVITNRLCQDMPGIISEMQSAFIHG 129
Query: 323 RLISDNVAVAFELIHNIKSRK 343
R I D + +A EL+ K K
Sbjct: 130 RQILDEILIANELVEEAKRLK 150
>IMGA|Medtr3g125040.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
31944726-31943241 H EGN_Mt090430 20090702
Length = 351
Score = 103 bits (256), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 108/227 (47%), Gaps = 42/227 (18%)
Query: 583 MSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNM 642
MS F +P +C +++ + FWWG + R+ IHW + + SK GG GF++L FN+
Sbjct: 1 MSCFLLPQGLCDRIERVVCSFWWGGSDSNRK-IHWTKNDSLFQSKDSGGFGFKNLRDFNL 59
Query: 643 AMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVR 702
MLAKQ WR +P + L++G
Sbjct: 60 DMLAKQAWRFYTQPHS-------------------------------------NLQKGGC 82
Query: 703 WRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMK-VRELFVEGEGRWDVGKVMTLFS 761
WR+GNG +I + W+P ++ F S + +P ++ V++LF++ WD + F
Sbjct: 83 WRIGNGHSIKIWEDNWIPSNNDF-KTISPNIGNPNIQLVKDLFLQDGSGWDTDLIKNNFL 141
Query: 762 MREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYV--ARRLLR 806
+ I IPI + D+ MW ++ G+YSV++GY + +R+ +R
Sbjct: 142 HIDRDNITQIPIINTSKNDEYMWMHEQNGVYSVKNGYQILQSRKSIR 188
>IMGA|Medtr4g042860.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
10317892-10316821 H EGN_Mt090430 20090702
Length = 341
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 127/310 (40%), Gaps = 31/310 (10%)
Query: 633 GFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHA 692
G + L FN+AMLAKQG R+ ++ + K+ YF +FL A + P + WRSI
Sbjct: 2 GVKTLKDFNLAMLAKQGLRIFHHGESFLTTCLKSHYFPRCNFLQAGIGFNPGFTWRSIVQ 61
Query: 693 AMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWD 752
A L W+P + + + V EL E GRW+
Sbjct: 62 AR-------------------LEDIWLPHQYGHKLWSPKPSGSNIHLVAELIHEECGRWN 102
Query: 753 VGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVAR--RLLRGRVH 810
V F + + IL IP+ + +D +W +K + + + R RL H
Sbjct: 103 AHLVNEFFLPFKAQQILQIPVFPSQQQDCFIWAVNKNDEF---TEFLKERRERLNSNYSH 159
Query: 811 -EVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCG-EEEDIN 868
+ G W K+W + P+ +W L N LP + L RGV+ C C ++E IN
Sbjct: 160 SSLQNGVWNKLWRVKTIPRHTHLIWCILHNWLPVRSALFNRGVQCSPLCCLCDQQQESIN 219
Query: 869 HAIVLCSKAKGVWRQGGYE-VGDIN----ISFTNFFLQVLAHGDKIKSQHFLVYARYIWM 923
H + C +K VW + DIN I F+ + V+A+ + Q +W
Sbjct: 220 HLFMECGWSKAVWFASPLSLIFDINGGEQILFSIWLEHVVAYENNCTIQLIFAICYGLWT 279
Query: 924 ARNNALWNNI 933
N ++ I
Sbjct: 280 LLNKRCFDGI 289
>IMGA|Medtr4g013050.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 2458849-2459642 H
EGN_Mt090430 20090702
Length = 155
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 69/222 (31%)
Query: 319 FVPGRLISDNVAVAFELIHNIK-SRKNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFC 377
F+ R I DN + FE++H++K + LK+DI+KAY++++W +L+ +ML+MG
Sbjct: 2 FISKRSILDNAMIPFEVVHHMKIDTRMSNNIATLKLDINKAYNQIDWVYLKKVMLKMGLS 61
Query: 378 EKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAK 437
+ VGPI GRGL Q DPL PYL++ CAEG S L + A+
Sbjct: 62 QSC-------------------NLVGPIILGRGLCQSDPLFPYLYILCAEGFSALNRQAE 102
Query: 438 RRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKS 497
RR SFF S
Sbjct: 103 RRA------------------INMASFF-------------------------------S 113
Query: 498 GIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSK 539
I++S ++ I+ IL V ++G G +LGLP +IGK+K
Sbjct: 114 KIYYSTTAEEQIQATITHILGVQAALGIGKFLGLPFMIGKNK 155
>IMGA|Medtr4g012970.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 2420499-2421292 H
EGN_Mt090430 20090702
Length = 155
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 69/222 (31%)
Query: 319 FVPGRLISDNVAVAFELIHNIK-SRKNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFC 377
F+ R I DN + FE++H++K + LK+DI+KAY++++W +L+ +ML+MG
Sbjct: 2 FISKRSILDNAMIPFEVVHHMKIDTRMSNNIATLKLDINKAYNQIDWVYLKKVMLKMGLS 61
Query: 378 EKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAK 437
+ VGPI GRGL Q DPL PYL++ CAEG S L + A+
Sbjct: 62 QSC-------------------NLVGPIILGRGLCQSDPLFPYLYILCAEGFSALNRQAE 102
Query: 438 RRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKS 497
RR SFF S
Sbjct: 103 RRA------------------INMASFF-------------------------------S 113
Query: 498 GIFFSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSK 539
I++S ++ I+ IL V ++G G +LGLP +IGK+K
Sbjct: 114 KIYYSTTAEEQIQATITHILGVQAALGIGKFLGLPFMIGKNK 155
>IMGA|Medtr1g084160.1 Ribonuclease H chr01_pseudomolecule_IMGAG_V3
16870634-16874775 H EGN_Mt090430 20090702
Length = 651
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 101/436 (23%), Positives = 166/436 (38%), Gaps = 27/436 (6%)
Query: 603 FWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSK 662
F WG R +H +W +C K G G R N+ + K GW L + D + K
Sbjct: 38 FIWGDTPSHRH-VHLASWASICTPKSYAGLGLRTACDMNLTAMMKVGWSLSHKKDAFWVK 96
Query: 663 LFKAKYFHNRDFLDAPLSRRP-TYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPL 721
+ KAKY D + + + + +WR I + + WRVG G+ I S W+P
Sbjct: 97 IIKAKYRCGNDIMPRIQTNKAGSNLWRGICRNWEKVTPNLIWRVGQGDNINFWSDMWVPG 156
Query: 722 DHSFWVEDSRDF-VDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISIN-ASR 779
+ +D M + F G W++ ++ L I +P + AS
Sbjct: 157 AGPLSCHTNLPITIDDDMLTVKEFANDAGDWNLSLLVNLLPPWIIEQIRSLPAPHSEASV 216
Query: 780 DQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRN 839
D + W G +S + +A + + + +W + K +W+ R
Sbjct: 217 DSLAWEGSLDGEFS----HALAYESILSLTPSNNSNLYKCIWKWQGPERIKFLLWKVARK 272
Query: 840 VLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGYEVGDINISFTNF 898
+L T RG+ + C C E E I H I C AK W +G+ + +F NF
Sbjct: 273 ILLTNLTRNSRGMAPNDRCSICNSEPESIIHTIRECHLAKATWNT---ILGNTSPNFYNF 329
Query: 899 ------FLQVLAHGD-KIKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLKAKEYMISW 951
F L+ D + S F V +W RNN ++NNI T+ ++ + +
Sbjct: 330 GELQHWFFWNLSRRDIEGWSTIFAVTVDCLWWDRNNYIFNNITLDVVTSTIRINTMVTNI 389
Query: 952 EH--TKLAQRSMASESSNTSRQRHAIFPPGRLSNSGDQSWQAFVDGSIFEQEGMQGFGAV 1009
+ T L R S +S+ + PP +SG + DG++ + G +
Sbjct: 390 KETWTDLNLRIPKSNNSSAASTIQNCIPP----SSGTV--KLNCDGAVKDYGSRAACGGI 443
Query: 1010 MESEEGIFIQAISGHF 1025
F+ S
Sbjct: 444 ARDSADTFLWGFSAKL 459
>IMGA|AC233668_8.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 19990-20214 H
EGN_Mt090430 20090702
Length = 74
Score = 97.8 bits (242), Expect = 3e-20, Method: Composition-based stats.
Identities = 44/73 (60%), Positives = 53/73 (72%)
Query: 402 VGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFAD 461
VG I PGRGLRQGDPLSPYLF+ CAEGLS L +R G L+G+ + + P+I HLLFAD
Sbjct: 2 VGLIIPGRGLRQGDPLSPYLFILCAEGLSTLIDKDERCGDLRGISICTHAPTICHLLFAD 61
Query: 462 DSFFFFEGSLQEA 474
D F FF + +EA
Sbjct: 62 DCFLFFRANEKEA 74
>IMGA|Medtr2g100610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23480965-23481815 H EGN_Mt090430 20090702
Length = 251
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 24/249 (9%)
Query: 538 SKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQ 597
SK ++ F ++ + +R+ +W + L++ G+ L+KS+ +IP Y M V +P S C ++
Sbjct: 4 SKGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESID 63
Query: 598 KRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPD 657
+ F W R I+ + WE++ K+ GG R N ++L + WRL D
Sbjct: 64 RLAINFLWKGSSNFR--IYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCD 121
Query: 658 TLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVG---------NG 708
+L+ K+ KYFH L + + W +I A L+ G +R+G N
Sbjct: 122 SLWVKVLTHKYFHADKLLTVT-RKSGSVTWNAIMKARFTLRDGFDFRLGDDNSSFWFVNW 180
Query: 709 ETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAI 768
IG L+ + + D D ++V+++FV G W+ + T ++
Sbjct: 181 SGIGKLTEKVLYV----------DIHDLNLRVKDVFVNGA--WNFNHIYTTLPASITDSL 228
Query: 769 LGIPISINA 777
+PI +N+
Sbjct: 229 KILPICLNS 237
>IMGA|Medtr4g084370.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
17724162-17724986 H EGN_Mt090430 20090702
Length = 274
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 108/264 (40%), Gaps = 20/264 (7%)
Query: 663 LFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLD 722
+ KAK+F N +A +Y WRS A V+++G W VGNG I + W+P
Sbjct: 1 MLKAKHFPNNTIWEAHQKPGISYSWRSFLQARWVIQKGSYWTVGNGNLINIWEDRWLPDQ 60
Query: 723 HSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQI 782
+ F V + KV +L W+ + LF E I IP+ D +
Sbjct: 61 NGFKVFSKKPNNCDIQKVSDLIDYTTLSWNTPLIHKLFLPFETDQIHQIPLINTNEDDDL 120
Query: 783 MWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLD---------ASPKDK-DF 832
+W G YSV+ GY+ ++ R + G C D P++K
Sbjct: 121 VWAHTNNGSYSVKYGYH----FIKNREEQAQGQPGNSSTCCDPISKNLWNQTIPQNKIQL 176
Query: 833 MWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGYEVGDI 891
+WR + N LP K L + G+ D CP CG E I+H + CS + VW +
Sbjct: 177 IWRIMNNGLPVKRNLMQCGIRCDPLCPGCGNHIESISHTFMQCSWVQRVWFASPLTLNFQ 236
Query: 892 NI-----SFTNFFLQVLAHGDKIK 910
N+ F + L GDK K
Sbjct: 237 NLDPDHPEFIEWLSLQLQKGDKKK 260
>IMGA|Medtr2g100360.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
23360766-23362551 H EGN_Mt090430 20090702
Length = 379
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 24/249 (9%)
Query: 538 SKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQ 597
SK ++ F ++ + +R+ +W + L++ G+ L+KS+ +IP Y M V +P S C ++
Sbjct: 4 SKGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESID 63
Query: 598 KRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPD 657
+ F W R I+ + WE++ K+ GG R N ++L + WRL D
Sbjct: 64 RLAINFLWKGSSNFR--IYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCD 121
Query: 658 TLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGET------- 710
+L+ K+ KYFH L + + W +I A L+ G +R+G+ +
Sbjct: 122 SLWVKVLTHKYFHADKLLTVT-RKSGSVTWNAIMKARFTLRDGFDFRLGDDNSSFWFVNW 180
Query: 711 --IGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAI 768
IG L+ + + D D ++V+++FV G W+ + T ++
Sbjct: 181 SGIGKLTEKVLYV----------DIHDLNLRVKDVFVNGA--WNFNHIYTTLPASITDSL 228
Query: 769 LGIPISINA 777
+PI +N+
Sbjct: 229 KILPICLNS 237
>IMGA|Medtr4g140270.1 RNA-directed DNA polymerase ; Ribonuclease H,
putative chr04_pseudomolecule_IMGAG_V3 34349081-34347530
H EGN_Mt090430 20090702
Length = 346
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 114/249 (45%), Gaps = 24/249 (9%)
Query: 538 SKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQ 597
SK ++ F ++ + +R+ +W + L++ G+ L+KS+ +IP Y M V +P S C ++
Sbjct: 4 SKGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESID 63
Query: 598 KRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPD 657
+ F W R I+ + WE++ K+ GG R N ++L + WRL D
Sbjct: 64 RLAINFLWKGSSNFR--IYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCD 121
Query: 658 TLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVG---------NG 708
+L+ K+ KYFH L + + W +I A L+ G +R+G N
Sbjct: 122 SLWVKVLTHKYFHADKLLTVT-RKSGSVTWNAIMKARFTLRDGFDFRLGDDNSSFWFVNW 180
Query: 709 ETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAI 768
IG L+ + + D D ++V+++FV G W+ + T ++
Sbjct: 181 SGIGKLTEKVLYV----------DIHDLNLRVKDVFVNGA--WNFNHIYTTLPASITDSL 228
Query: 769 LGIPISINA 777
+PI +N+
Sbjct: 229 KILPICLNS 237
>IMGA|Medtr2g100590.1 Ribonuclease H chr02_pseudomolecule_IMGAG_V3
23474829-23476616 H EGN_Mt090430 20090702
Length = 477
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 62/249 (24%), Positives = 115/249 (46%), Gaps = 24/249 (9%)
Query: 538 SKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQ 597
SK ++ F ++ + +R+ +W + L++ G+ L+KS+ +IP Y M V +P S C ++
Sbjct: 4 SKGEILNFFEENISQRLASWQHHLLNKVGRMTLVKSVLNSIPYYYMQVAWLPQSTCESID 63
Query: 598 KRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPD 657
+ F W R I+ + WE++ K+ GG R N ++L + WRL D
Sbjct: 64 RLAINFLWKGSSNFR--IYLVGWEKITKPKKLGGLEIRKAREANTSLLGRLVWRLHQNCD 121
Query: 658 TLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGET------- 710
+L+ K+ KYFH L + + W +I A L+ G +R+G+ +
Sbjct: 122 SLWVKVLTHKYFHADKLLTVT-RKSGSVTWNAIMKARFTLRDGFDFRLGDDNSSFWFVNW 180
Query: 711 --IGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAI 768
IG L+ + + D D ++V+++FV G W+ + T ++
Sbjct: 181 SGIGKLTEKVLYV----------DIHDLNLRVKDVFVNGA--WNFNHIYTTLPASITDSL 228
Query: 769 LGIPISINA 777
+PI +N+
Sbjct: 229 KILPICLNS 237
>IMGA|Medtr5g037770.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr05_pseudomolecule_IMGAG_V3
15923468-15924026 H EGN_Mt090430 20090702
Length = 136
Score = 96.3 bits (238), Expect = 7e-20, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 65/91 (71%)
Query: 238 FWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVA 297
FW + +DI++DC +WL+ G FP +L T+I L+ K + ++K++RPI+LCNVLYK+++
Sbjct: 39 FWSICSEDIFKDCCEWLELGQFPASLNTTNITLISKDNIHTTVKDWRPITLCNVLYKLIS 98
Query: 298 KSLANRLKKILPLIIDECQSAFVPGRLISDN 328
K LA+ LK +LP I + QS F+ GR I DN
Sbjct: 99 KVLADGLKGVLPKCIYDNQSTFLSGRSILDN 129
>IMGA|Medtr5g073410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26368918-26367637 H EGN_Mt090430 20090702
Length = 409
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 132/341 (38%), Gaps = 33/341 (9%)
Query: 696 VLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGK 755
+++ G RW++GN I + PW+ V ++V L + W+
Sbjct: 2 IVRSGARWKIGNNINIPMFEAPWLRNGGVISGVGQSSDVLQNVRVHSLIDQNTNGWNYNM 61
Query: 756 VMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGG 815
V F + I+ PI D ++W +K G YSV+ + G
Sbjct: 62 VNYYFDYDTVQEIIRTPIFHQVEEDALIWKAEKNGHYSVK--------------RQAVGI 107
Query: 816 WWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGE-EEDINHAIVLC 874
+G K +F+WR R+ LPT+ RL +GV C C E ED H + C
Sbjct: 108 AFGDS---KVPLKVNNFLWRVCRDCLPTQARLLDKGVNCTYLCGLCEECYEDTTHVLFDC 164
Query: 875 SKAKGVWRQGGY--EVGDINISFTN---FFLQVLAHGDKIKSQHFLVYARYIWMARNNAL 929
KA+ VW +V + ++ L +L K K + F + +W +RN +
Sbjct: 165 PKARNVWLNCSMVDKVSSVMLNHNTAAEIILALLKELTKEKFEQFAMNLWSLWKSRNLRI 224
Query: 930 WNNIRDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNTSRQR----HAIFPPGRLSNS- 984
W NI +TC +A++ ++ W + ++ ++ +Q H + LS+
Sbjct: 225 WQNISETCQAISARAQQMLVEWREANMRKQKCSAAGHMVVQQADVNMHYVGASSLLSSHI 284
Query: 985 -----GDQSWQAFVDGSIFEQEGMQGFGAVMESEEGIFIQA 1020
+ +D + E GFG + G F +A
Sbjct: 285 KWTKPQQGKLKCNIDAAFSEDLNHVGFGLCIRDAAGNFRKA 325
>IMGA|AC233668_29.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 112870-111301 H
EGN_Mt090430 20090702
Length = 281
Score = 93.6 bits (231), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 75/122 (61%), Gaps = 6/122 (4%)
Query: 237 KFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIV 296
KF+H + +W L T FP+ L +T+IVL+PK DNP + + PISL LYKI+
Sbjct: 161 KFFHALTRKLWN-----LRTSEFPEKLVETNIVLIPKKDNPETTWDLHPISLGKFLYKII 215
Query: 297 AKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSR-KNQRGACALKIDI 355
+K L NRL+++LP I + FV I DNV VA +++H++K + K ++G A KID
Sbjct: 216 SKVLGNRLERLLPKCISQEHLTFVENISILDNVLVASKILHHMKCKSKGKKGEAASKIDT 275
Query: 356 SK 357
SK
Sbjct: 276 SK 277
>IMGA|Medtr5g021560.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
8248910-8249829 H EGN_Mt090430 20090702
Length = 241
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 118/285 (41%), Gaps = 59/285 (20%)
Query: 653 MMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIG 712
M +P++L ++FK++YF + +L L P + WRSI + +L G R +GNG+ +
Sbjct: 1 MSKPESLVVRVFKSRYFPHSSYLGPKLGYNPNFAWRSIWNSRQLLLYGCRCTIGNGQQVS 60
Query: 713 VLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIP 772
V++ PW+ W++ + +++V +L V+ E WD+ K+ +LF +AIL P
Sbjct: 61 VMNDPWVRGTREKWIQSPQSQGVRSLRVSDLIVDEERVWDIDKLESLFPDDMVQAILDTP 120
Query: 773 ISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDF 832
+ D+I W ++ G
Sbjct: 121 LFAEVHNDRIAWMKERSG------------------------------------------ 138
Query: 833 MWRALRNVLPTKERLRRRGVEVDIGCPWCGE-EEDINHAIVLCSKAKGVWRQGGYEVGDI 891
R + T RL+ R V+ ++ CPWC ED HA V C+ E
Sbjct: 139 -----RGCVLTCLRLQSRHVQCEVLCPWCDTVVEDDWHAFVGCT----------VEHESC 183
Query: 892 NISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDT 936
+ + LQ I + L+ + IW ARN+ +WN+ T
Sbjct: 184 YWARLSTVLQSRVGTANIAGRVALLLWK-IWAARNDVIWNDAHHT 227
>IMGA|Medtr7g068050.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 13863114-13862631 H
EGN_Mt090430 20090702
Length = 114
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 70/113 (61%), Gaps = 16/113 (14%)
Query: 609 EGGRR--GIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKA 666
GG R GI WL+W+++ KR GG GF++L+ FNMA+L Q WRLM +P+ + +F+A
Sbjct: 6 NGGNRNKGIRWLSWDKLFVHKRNGGMGFKNLYLFNMALLGNQVWRLMSQPE---NAIFEA 62
Query: 667 KYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWM 719
+N +YVW+SIH A+ ++KQG RW++GNG+ I V W+
Sbjct: 63 NKGNNL-----------SYVWKSIHEAIPMVKQGTRWKIGNGDKIRVFQDRWL 104
>IMGA|Medtr3g009350.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
1330505-1330813 H EGN_Mt090430 20090702
Length = 102
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 62/93 (66%), Gaps = 1/93 (1%)
Query: 528 YLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFK 587
YLG+P+ +G++K+QVF FLQDR+ K++ W R LS AG+ VLIK +A+AIPTY MS F
Sbjct: 10 YLGMPTGMGRNKRQVFEFLQDRIWKKLKGWKERNLSFAGRSVLIKVVAEAIPTYIMSGFL 69
Query: 588 IPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAW 620
+P S C ++K + WWG + HW+ W
Sbjct: 70 LPKSFCNQLEKLICNIWWGSNTDQGK-THWINW 101
>IMGA|CU179634_33.1 RNA-directed DNA polymerase (Reverse
transcriptase) CU179634.6 121572-121327 H EGN_Mt090430
20090702
Length = 81
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 56/79 (70%)
Query: 352 KIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGL 411
K+DI KAYD +NW FL +M +MGF +W++W+ C++ VK+SVL+N + G RGL
Sbjct: 3 KLDIQKAYDHLNWNFLLKLMEKMGFAFRWIKWIEHCISTVKFSVLINRETNGFFSSQRGL 62
Query: 412 RQGDPLSPYLFLFCAEGLS 430
RQGDPLSP+LF+ EG S
Sbjct: 63 RQGDPLSPFLFIMGMEGSS 81
>IMGA|Medtr6g070340.1 Endonuclease/exonuclease/phosphatase, putative
chr06_pseudomolecule_IMGAG_V3 13241205-13239102 H
EGN_Mt090430 20090702
Length = 201
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
Query: 123 RWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEES 182
WL GD N+K+FH + R+R I+KL+ ++G VQ +++ + N+F + +
Sbjct: 2 HWLKDGDANTKFFHDILAARRRGNSIVKLD-DNGSEVQGVENIRGVVFNHFKNHFRSVMV 60
Query: 183 VGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVI 242
+ NL + + + L PF+L+E+ + ++ KSP PDG+N F +FW +
Sbjct: 61 DRLGAENLNFNMIGMFETSELVKPFSLEEVKQVVWDCDTFKSPWPDGINLGFLTEFWQEV 120
Query: 243 GDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISL---CNVLYK 294
DD+ R ++ G + L +T I L+PK ++P L ++ ISL C+V K
Sbjct: 121 KDDLMRFFGEFHRKGRLSRGLNNTFIGLIPKVESPQKLSDFWSISLKNGCDVTEK 175
>IMGA|Medtr7g084960.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
18459835-18459356 H EGN_Mt090430 20090702
Length = 144
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 82/155 (52%), Gaps = 15/155 (9%)
Query: 629 EGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWR 688
+GG F++L FN+AML KQGWRLM+ PD+L ++L+KAKY+ +F ++ L +P++VWR
Sbjct: 5 DGGMSFKNLPTFNLAMLGKQGWRLMINPDSLVARLYKAKYYPRCNFFESTLGHKPSFVWR 64
Query: 689 SIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGE 748
SI +GE I V + W+ D + + F ++V + +
Sbjct: 65 SI---------------CDGEDISVWYNKWIANDVTLIPHANGHFPLADLRVSDCMLHDR 109
Query: 749 GRWDVGKVMTLFSMREFRAILGIPISINASRDQIM 783
W++ + ++F I+ P+ + + D+++
Sbjct: 110 KEWNLPFLQSIFDHHVVENIVNTPLYPSVTEDRLI 144
>IMGA|Medtr2g095830.1 Lipocalin chr02_pseudomolecule_IMGAG_V3
22005738-22006807 E EGN_Mt090430 20090702
Length = 168
Score = 89.0 bits (219), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 91/181 (50%), Gaps = 17/181 (9%)
Query: 696 VLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGK 755
+++ G RWR+GNG++I V + PW+ D KV +L + GE W+ G
Sbjct: 4 IVRGGQRWRIGNGKSIAVWTDPWLREDE---------------KVADL-MSGES-WNWGM 46
Query: 756 VMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGG 815
+ +F+ + +AI + + D+I+W +++ G Y+VRS Y A L V G
Sbjct: 47 IAGIFNDHDRKAISNLALLNRDGEDRIIWKFNRYGNYTVRSAYRYAMETLVDNVEYRVSG 106
Query: 816 WWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEEEDINHAIVLCS 875
W KMW L + K F+WRA+R LPT+ RL+ + V CP+C + N + +
Sbjct: 107 EWLKMWSLKIPQRIKVFLWRAVRGALPTRMRLQDKVVPCTDCCPFCETNYENNWHVFMGV 166
Query: 876 K 876
K
Sbjct: 167 K 167
>IMGA|Medtr2g095450.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
21818522-21818196 H EGN_Mt090430 20090702
Length = 108
Score = 87.4 bits (215), Expect = 3e-17, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 62/99 (62%)
Query: 385 MLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQG 444
M+CV + YSVL+N + I GRGLR+GDPLS YLF+ C +G+S+L + R R+ G
Sbjct: 1 MMCVGSIFYSVLVNDETTNLIYLGRGLRKGDPLSLYLFILCMKGISMLMRQTYRGDRMHG 60
Query: 445 VKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKK 483
V++ RN P ++HLL + F F + + E E + +I K
Sbjct: 61 VQIFRNEPIMSHLLVVNGCFPFCKANCVEDENMKEIQTK 99
>IMGA|Medtr6g024980.1 Putative ribonuclease H protein At1g65750,
chr06_pseudomolecule_IMGAG_V3 5466766-5467589 H
EGN_Mt090430 20090702
Length = 259
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 122/271 (45%), Gaps = 25/271 (9%)
Query: 507 RELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAG 566
+ ++ +ISTI+ VA G+ L P + G+ + V+ + D++ KR+ W L++AG
Sbjct: 7 KRVIQDISTIIFVADL---GHCLCFPLIKGRVSRNVYNNVVDKVLKRLATWKGNILNKAG 63
Query: 567 KEVLIKSIAQAIPT-YCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCC 625
+ L+KS+ AIP Y F PL +G R + + W +
Sbjct: 64 RACLVKSVTTAIPVRYDGKEF--PLG----------------GDGLSRTWNHVNWNMVTT 105
Query: 626 SKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTY 685
KR GG G R+ ++A+L+K W ++ D L+ K+ KY +N +P+
Sbjct: 106 PKRFGGLGIREARLTDLALLSKLVWNMLHNKDKLWVKVLSHKYLYNTSLWMNKKHNKPSI 165
Query: 686 VWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFV 745
R I A+ G +RVG+G++ + ++ W L + + D M +++++
Sbjct: 166 TCRGILHAITSFAPGYNFRVGSGDS-SIWNNDWTQLGPLCQLVPFVNISDSVMCLKDVW- 223
Query: 746 EGEGRWDVGKVMTLFSMREFRAILGIPISIN 776
G+W++ + T+ I +P N
Sbjct: 224 -ENGKWNLQGLATMIPTDIVHYIHQLPAPTN 253
>IMGA|Medtr4g160470.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 40668899-40668561 H
EGN_Mt090430 20090702
Length = 112
Score = 85.5 bits (210), Expect = 1e-16, Method: Composition-based stats.
Identities = 40/79 (50%), Positives = 53/79 (67%)
Query: 421 LFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDI 480
LF+ CAEGLS+L + + RG + G+KV R P +THLLF DD F F + +EA+ +++
Sbjct: 24 LFIICAEGLSVLLKKLEARGEIHGIKVCRGAPLLTHLLFVDDCFLFCRANEKEAQALSEA 83
Query: 481 LKKYERALGQAINLNKSGI 499
LKKYE A Q INL KS I
Sbjct: 84 LKKYEEASRQPINLQKSKI 102
>IMGA|Medtr4g084240.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr04_pseudomolecule_IMGAG_V3
17645335-17644567 H EGN_Mt090430 20090702
Length = 185
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 14/104 (13%)
Query: 601 NKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLF 660
N FWWG RGI WL+W+++ K G GF DL FN+AMLAKQGW+ P++L
Sbjct: 3 NFFWWGHGGANNRGISWLSWKKLLMHKVHAGVGFIDLPAFNLAMLAKQGWKFQTNPESL- 61
Query: 661 SKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWR 704
FL A L P+YVW +I A +++ VRWR
Sbjct: 62 -------------FLTARLGDNPSYVWDNILQACLIVRNEVRWR 92
>IMGA|Medtr5g073420.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
26369293-26369057 H EGN_Mt090430 20090702
Length = 78
Score = 85.1 bits (209), Expect = 1e-16, Method: Composition-based stats.
Identities = 37/78 (47%), Positives = 52/78 (66%)
Query: 570 LIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKRE 629
+IKS+ QAIP+Y MS+F + S+ ++K +N FWW RGIHWL+WE++ K+
Sbjct: 1 MIKSVLQAIPSYVMSIFLLLSSLIDAIEKMLNAFWWEHGGSNNRGIHWLSWEKLTLHKQY 60
Query: 630 GGRGFRDLHCFNMAMLAK 647
GG F+DL FN+AML K
Sbjct: 61 GGMSFKDLTAFNLAMLGK 78
>IMGA|Medtr1g009630.1 RNA-directed DNA polymerase, related
chr01_pseudomolecule_IMGAG_V3 1363994-1362753 E
EGN_Mt090430 20090702
Length = 180
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 9/180 (5%)
Query: 123 RWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLN----YFSTVYS 178
W GD N+K FHAS R K++ ED + V+ ++ I+ +FS ++
Sbjct: 2 HWYRDGDLNTKCFHAS---ALLREKLILSYFEDANEVRAQ--MKYISSMWPKIHFSGLFQ 56
Query: 179 AEESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKF 238
+SV + N ++ +N L PF ++E E F++ DK PG G N F+Q F
Sbjct: 57 VTDSVRASVINATNQVISEDENTYLVVPFCVEEFKEEMFSLLADKCPGSKGFNLGFYQHF 116
Query: 239 WHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAK 298
W + DI+ + WL +L T++ L PK + + + I+LCN+LY+++ K
Sbjct: 117 WQICSFDIFWEYCYWLTNFQISASLNSTNMTLTPKGNEWRYMMDCIIITLCNLLYEVMLK 176
>IMGA|Medtr3g124260.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 31444078-31442691 H
EGN_Mt090430 20090702
Length = 404
Score = 85.1 bits (209), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 71/149 (47%)
Query: 696 VLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGK 755
V++ G RW +G+G I +++ PW+ + D V L + W+
Sbjct: 2 VVRHGTRWIIGSGYDISMINEPWIGMGLRVPPAAPDDLSYQGYSVGHLIHQDVKTWNEPL 61
Query: 756 VMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGG 815
V+ +F + IL P+ + + D+++W +K G YSVRS Y V + H G
Sbjct: 62 VICIFEAGTAQQILNTPLFLQVNEDKLVWKPEKNGQYSVRSAYRVCVEEIADMSHLHTNG 121
Query: 816 WWGKMWCLDASPKDKDFMWRALRNVLPTK 844
+WG +W L PK K+ +WR R LPT+
Sbjct: 122 FWGGIWKLKVPPKVKNMLWRVCRECLPTR 150
>IMGA|Medtr5g090160.1 Haem peroxidase, plant/fungal/bacterial
chr05_pseudomolecule_IMGAG_V3 35125187-35123779 E
EGN_Mt090430 20090702
Length = 360
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 111/249 (44%), Gaps = 13/249 (5%)
Query: 740 VRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYY 799
V++L + W+ + F E I +P++ ++D +MW + + G+YSV++GY
Sbjct: 2 VKDLLIGSPPDWNKKLIEDTFIPFEGIQIQQLPLTDKENQDSLMWMFSETGVYSVKTGYQ 61
Query: 800 VARRLLRGR-----VHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEV 854
+ R E+ W K+W L P+ K +W+ + LP + L RG+
Sbjct: 62 AIQCWKNNRDQGPSSEEIMKTVWKKVWGLQTIPRHKVLIWKIINRALPVRSELINRGIRC 121
Query: 855 DIGCPWCGEE-EDINHAIVLCSKAKGVW--RQGGYEVGDINIS-FTNFFLQVLAHGDK-- 908
+ CP C E INH + C + W Q G + N++ F ++ + + + DK
Sbjct: 122 SLLCPRCDSTIETINHLFLNCEHTRREWFGSQLGINFQNENLTDFIDWLISFILNNDKST 181
Query: 909 IKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNT 968
I + L+Y+ +W ARN ++ N +AK ++S+++ + A + +T
Sbjct: 182 IITMAALLYS--VWHARNQLVFKNKDIHGEVVIQRAKNSILSYKNVQQADLDHLNNIDST 239
Query: 969 SRQRHAIFP 977
A P
Sbjct: 240 RSMHRAQVP 248
>IMGA|Medtr1g122160.1 contains similarity to reverse trancriptase,
related, putative chr01_pseudomolecule_IMGAG_V3
26789109-26788828 H EGN_Mt090430 20090702
Length = 93
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 531 LPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPL 590
+P+ G+SK+Q F F+ D++ K++ W + LS G+ VLI+++AQAIPTY MS F +P
Sbjct: 1 MPTQFGRSKEQDFHFIMDKIWKKLKGWKEKCLSFEGRGVLIRAVAQAIPTYYMSCFLLPK 60
Query: 591 SICVTMQKRMNKFWWGKKEGGRRGIHW 617
+C ++K + FWWG G +R IHW
Sbjct: 61 GLCTKIEKAVCSFWWG-TAGDKRKIHW 86
>IMGA|Medtr3g103220.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
25344775-25343668 H EGN_Mt090430 20090702
Length = 206
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 29/139 (20%)
Query: 581 YCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCF 640
YCMSVF +P +I ++ M F+WG K+ G R I+ L W+ M K GG FRDL +
Sbjct: 34 YCMSVFLLPTTIREEIEHVMKSFYWGLKKNGGRSINRLKWDNMTPCKDHGGLKFRDLEGY 93
Query: 641 NMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQG 700
N+AML KQ +L+ + +L +K AKY
Sbjct: 94 NLAMLVKQKLKLLTKFPSLLTKAPNAKYIFKN---------------------------- 125
Query: 701 VRWRVGNGETIGVLSHPWM 719
RWR+G+G I V ++PW+
Sbjct: 126 -RWRIGDGNNINVWTYPWI 143
>IMGA|Medtr5g083860.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
31873419-31873604 H EGN_Mt090430 20090702
Length = 61
Score = 82.8 bits (203), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 37/61 (60%), Positives = 44/61 (72%)
Query: 374 MGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLF 433
MGF +KW++WMM+CV+ YS+L+N VGPI GRGLRQGDPLS YLF AEGL L
Sbjct: 1 MGFDDKWIRWMMMCVSSATYSILMNFNRVGPIITGRGLRQGDPLSSYLFSMVAEGLCALI 60
Query: 434 Q 434
Sbjct: 61 H 61
>IMGA|AC233668_7.1 RNA-directed DNA polymerase (Reverse
transcriptase) AC233668.2 19636-19893 H EGN_Mt090430
20090702
Length = 85
Score = 79.7 bits (195), Expect = 8e-15, Method: Composition-based stats.
Identities = 45/85 (52%), Positives = 59/85 (69%), Gaps = 1/85 (1%)
Query: 280 LKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNI 339
+ ++R I+L NVLYK+VAK LANRLKKIL I E QSAF R I DN ++ E IH++
Sbjct: 1 MNDWRLIALWNVLYKLVAKVLANRLKKILHKCISEYQSAFASERSILDNAMISIEAIHHM 60
Query: 340 K-SRKNQRGACALKIDISKAYDRVN 363
K S+K + ALK+DISK DR++
Sbjct: 61 KVSKKVRDKNVALKLDISKVCDRID 85
>IMGA|AC233662_12.1 Lipocalin AC233662.1 48072-47128 H EGN_Mt090430
20090702
Length = 275
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 750 RWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRV 809
R+ + ++ F +AI + + +D+++W +++ IY+VRS Y A + L V
Sbjct: 4 RYSLHPIIIEFFTHFRKAISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNV 63
Query: 810 HEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDIN 868
G W KMW L + K F+WRA+R V PT+ R++ +GV CP+C E+
Sbjct: 64 EYRILGEWLKMWSLKIPQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDW 123
Query: 869 HAIVLCSKAKGVWRQGG 885
H + C + K +WR G
Sbjct: 124 HVFMGCEEVKTIWRTTG 140
>IMGA|AC233657_3.1 Lipocalin AC233657.1 16055-16999 H EGN_Mt090430
20090702
Length = 275
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 1/137 (0%)
Query: 750 RWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRV 809
R+ + ++ F +AI + + +D+++W +++ IY+VRS Y A + L V
Sbjct: 4 RYSLHPIIIEFFTHFRKAISNLALLNRDGKDRLIWKFNRHEIYTVRSAYRYAMKTLVDNV 63
Query: 810 HEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDIN 868
G W KMW L + K F+WRA+R V PT+ R++ +GV CP+C E+
Sbjct: 64 EYRILGEWLKMWSLKIPQRVKVFLWRAVRGVFPTRMRMQDKGVPCTDCCPFCETNYENDW 123
Query: 869 HAIVLCSKAKGVWRQGG 885
H + C + K +WR G
Sbjct: 124 HVFMGCEEVKTIWRTTG 140
>IMGA|Medtr3g162890.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
42636230-42638565 E EGN_Mt090430 20090702
Length = 167
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 85/157 (54%), Gaps = 11/157 (7%)
Query: 94 DDVTVQR-LKNEWNTILFKEECRMRQIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKLE 152
D + +R L+NE+N +L +E+ Q ++ W+ + ++N+K+FH R+RR K+ L
Sbjct: 16 DLINFERHLQNEYNKVLAQEKMLWYQKSRENWIKFENKNTKFFHVQTVIRRRRNKVAGL- 74
Query: 153 NEDGDIVQDNDSLEQITLNYFSTVY-----SAEESVGIEIFNLVQPKVTAIQNNILTTPF 207
N DG + DSL + L+YF +++ ++ S+ F P ++ N L
Sbjct: 75 NIDGIWCINEDSLRREALSYFRSLFQEGGPTSPSSLHFSHF----PHISIDLYNSLCLNP 130
Query: 208 TLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGD 244
+L+E+ + F+M K+PG DG P FF+ FW+++
Sbjct: 131 SLEEVKFSLFSMNSYKAPGQDGFQPIFFKTFWNIVSS 167
>IMGA|Medtr3g039900.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr03_pseudomolecule_IMGAG_V3
10722310-10721876 H EGN_Mt090430 20090702
Length = 126
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 66/122 (54%)
Query: 209 LDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHI 268
++E+ + +N KSPG G+N F + FW ++ ++ G K + T I
Sbjct: 3 VEEVKQVVWNYDSYKSPGLGGINFGFIKDFWPDFQEEFTCFITEFHGNGKLSKGINITFI 62
Query: 269 VLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDN 328
L+ K DN + ++RPISL + LYK+++K LANRL+ + +I E Q AF+ R I D
Sbjct: 63 TLIRKIDNSQRVNDFRPISLVSNLYKVLSKVLANRLRCVTESVISETQLAFIHHRQILDG 122
Query: 329 VA 330
A
Sbjct: 123 HA 124
>IMGA|Medtr8g093640.1 Polynucleotidyl transferase, Ribonuclease H fold
chr08_pseudomolecule_IMGAG_V3 20655028-20657384 H
EGN_Mt090430 20090702
Length = 376
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 35/252 (13%)
Query: 794 VRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVE 853
V+S Y + L H G W +W L PK ++ +WR R L T+ RL +GV+
Sbjct: 30 VKSAYRLCVEELIDASHLRRPGNWSSIWKLKVPPKVRNLIWRICRLCLSTRIRLHDKGVQ 89
Query: 854 VDIGCPWC-GEEEDINHAIVLCSKAKGVWRQGGY--EVGDINISFTNFFLQVLAHGDKIK 910
C C ED+ H CS A VWR G +V N + + V A D +
Sbjct: 90 CPTQCVSCESSHEDMAHLFFACSFAIQVWRLSGLWSDVSAANSNDDSNIGTVFALLDMLT 149
Query: 911 SQHFLVYARYIWMA---RNNALWNNIRDTCYTTFLKAKEYMISWE--HTKLAQRSMASES 965
++ +V+A +W RN +W ++ + +A+ + W+ +TK S A+ +
Sbjct: 150 TKQRVVFAATVWSLWKHRNLKVWEDVTEVAAVVVDRARVMITEWQIANTKTPAESRAATT 209
Query: 966 SNTSRQRHAIFPPGR-LSNSGDQS--------WQAFVDG-------SIFEQE-GMQGFGA 1008
+ PP + LSNS + + WQ G ++F G G
Sbjct: 210 A----------PPTQLLSNSAEVNSSDDGLVLWQKPTSGRYKCNVDAVFSSNFNRTGIGI 259
Query: 1009 VMESEEGIFIQA 1020
+ EEG F+ A
Sbjct: 260 CIHDEEGAFVLA 271
>IMGA|AC225507_9.1 Polynucleotidyl transferase, Ribonuclease H fold
AC225507.11 35556-36938 E EGN_Mt090430 20090702
Length = 358
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 104/243 (42%), Gaps = 20/243 (8%)
Query: 783 MWHWDKKGIYSVRSGYYVARRLLRGR-----VHEVDGGWWGKMWCLDASPKDKDFMWRAL 837
MW + G Y+V+SGY + + W K+W L P+ K +WR L
Sbjct: 1 MWMYSNNGNYTVKSGYEALQSWKNNSNPGPSTSSQNNNIWKKLWALHTIPRHKMIVWRIL 60
Query: 838 RNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGYEV---GDINI 893
N LP + L +RGV CP C E NH + C + + VW + + I
Sbjct: 61 HNTLPVRTELNKRGVNCPPLCPRCYSNLETTNHIFMSCERTQRVWFGSQLSIRFPDNSTI 120
Query: 894 SFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLKAKEYMISWEH 953
+F+++ +++ + IW ARN A++ N L ++ I ++
Sbjct: 121 NFSDWLFDAISNQTEEIIIKISAITYSIWHARNKAIFEN-------HILAYEQATIKPQN 173
Query: 954 TKLAQRSM-ASESSNTSRQRHAIFPPGRLSNSGDQSWQAFVDGSIFEQEGMQGFGAVMES 1012
+ S+ A+ ++NT+R+R + R + +A D ++ + +G G G ++ +
Sbjct: 174 PNIVLSSLSATSNTNTTRRRSNV--RSRWQKPLNNILKANCDANL-QVQGRWGLGCIIRN 230
Query: 1013 EEG 1015
+G
Sbjct: 231 ADG 233
>IMGA|Medtr3g103760.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
25622719-25621333 H EGN_Mt090430 20090702
Length = 441
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 110/276 (39%), Gaps = 20/276 (7%)
Query: 659 LFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPW 718
L+ +L +Y + L A + +W SI A VLK G WRVG+ + S PW
Sbjct: 8 LWVQLLSDRYAMGVNTLLASARPSVSVIWSSILHARDVLKDGFSWRVGSDNS-SFWSCPW 66
Query: 719 MPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPISINAS 778
L + D D + V+++ ++ + T I I NAS
Sbjct: 67 SSLGILGRIPPYIDIHDLQLTVKDVISSNNPHTNI--LYTQLPPFAADTINNIHFKFNAS 124
Query: 779 -RDQIMWHWDKKGIYSVRSGY--YVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWR 835
D +WH +K G Y+ +SGY ++R+ L + W +W L K K F W
Sbjct: 125 VEDTFIWHNNKNGTYTPKSGYSWLLSRKELVIISNPPPSCSW--IWKLHMPEKIKLFFWL 182
Query: 836 ALRNVLPTKERLRRRGVEVDIGCPWCG-EEEDINHAIVLCSKAKGVWRQGGYEVGDINIS 894
A N +PT L R + C CG +E H + C+ +K +W++ G+ D
Sbjct: 183 ACHNSVPTLSMLNHRNIAPSPVCSRCGLHDETFLHCVRDCAHSKSIWQRIGFIHND---- 238
Query: 895 FTNFFLQVLAH----GDKIKSQHFLVYARYIWMARN 926
FF + H + + F A W RN
Sbjct: 239 ---FFSTSVTHEWLKNNSVGHLSFTFAATIWWAWRN 271
>IMGA|Medtr3g043440.1 Polynucleotidyl transferase, Ribonuclease H
fold chr03_pseudomolecule_IMGAG_V3 11780720-11779218 H
EGN_Mt090430 20090702
Length = 425
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/318 (23%), Positives = 128/318 (40%), Gaps = 32/318 (10%)
Query: 566 GKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCC 625
G+ L+KS+ Q++ +C+SV+ P+ + +++ M F W R+ + ++W ++C
Sbjct: 3 GRVQLVKSLIQSMLLHCISVYSFPVKLTKDIERWMRNFVWSGDVNQRKLVT-VSWHKVCL 61
Query: 626 SKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDF-LDAPLSRRP- 683
+EGG G R L N +G L + + L S A + +R P+S
Sbjct: 62 PLKEGGLGIRSLSKIN------EGANLKLCRELLHSNYQWAHFLRSRVLKKKKPISYHIF 115
Query: 684 TYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWM--PLDHSFWVEDSRDFVDPTMKVR 741
+ VW I + W +G+G I + W PL F ++ D
Sbjct: 116 SSVWSGIKHKYTEVLANSSWNLGDGANINFWTDSWCGKPLVEEFSIDPGLH--DNLSSTV 173
Query: 742 ELFVEGEGRWDVGKVMTLFSMREFRAILGIP----ISINASRDQIMWHWDKKGIYSVRSG 797
LF+E + +W + + + ++ F I I I + A D+++ G +
Sbjct: 174 NLFIE-DAKWKIPQSL----LQNFPNIQNIVEKVIIPVIAKDDEMLSKLSSNGELCFKDA 228
Query: 798 YYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIG 857
Y L H + W +W P MWR L N LPT + RG +
Sbjct: 229 Y------LFHCSHGQNIAWAKIIWNKCIPPSKSMMMWRRLHNKLPTDDIPGSRGCQF--- 279
Query: 858 CPWCGEEEDINHAIVLCS 875
P ++ +H I LCS
Sbjct: 280 -PSMNQKRFTSHPIPLCS 296
>IMGA|Medtr4g109120.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr04_pseudomolecule_IMGAG_V3
24335493-24334934 H EGN_Mt090430 20090702
Length = 100
Score = 75.1 bits (183), Expect = 2e-13, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 53/85 (62%)
Query: 248 RDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKI 307
++C WL+ +L T+IVL+PK ++K +RPISLCNVL+K++ K LANRLK +
Sbjct: 15 QECCSWLNDNQIFSSLNATNIVLIPKGREQKTMKYWRPISLCNVLHKLLTKVLANRLKLV 74
Query: 308 LPLIIDECQSAFVPGRLISDNVAVA 332
L + QS FV R I DN +A
Sbjct: 75 LRKCVSYNQSTFVSSRSILDNAMIA 99
>IMGA|Medtr5g068610.1 Polynucleotidyl transferase, Ribonuclease H fold
chr05_pseudomolecule_IMGAG_V3 24592281-24593243 H
EGN_Mt090430 20090702
Length = 320
Score = 75.1 bits (183), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 15/216 (6%)
Query: 826 SPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQG 884
S K K F+WRA+R VLPT+ RL+ +GV CP+C E+ H + C + K VWR
Sbjct: 10 SAKGKFFLWRAVRGVLPTRMRLQDKGVPCTDCCPFCETNYENDWHVFMGCEEVKTVWRTA 69
Query: 885 GY-----EVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYT 939
G E+ SF N F +L K + + IW RN+ +W+
Sbjct: 70 GLCDLIAEIVADAASFANCFFSLLCRLTTNKCKDMTMILWCIWRRRNDKVWDGDLKLVSI 129
Query: 940 TFLKAKEYMISWEHTKLAQRSMASESSNTSRQRHAIFPPGRLSNSGDQSWQAFVDGSIFE 999
A+E + W+ +A+++ A +Q PP + + VD +IF
Sbjct: 130 AIQLAREALFQWQ---IARQNTAEPHQTQQQQTIQWQPPAQ------GVLKCNVDAAIFN 180
Query: 1000 QEGMQGFGAVMESEEGIFIQAISGHFTGGMDPFIAE 1035
+ + G I+A + + G P AE
Sbjct: 181 ELKSLCTCICIRDHRGQIIKAATNWYEGNPLPQEAE 216
>IMGA|Medtr5g040610.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
17349249-17348078 H EGN_Mt090430 20090702
Length = 340
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 89/221 (40%), Gaps = 20/221 (9%)
Query: 813 DGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAI 871
D W K+W L P+ K+F+WR + N LP + L +RG++ CP C + EDINHA
Sbjct: 31 DTTIWKKLWALKTIPRHKNFLWRVINNSLPLRSELGKRGIQCSPLCPHCNSKIEDINHAF 90
Query: 872 VLCSKAKGVWRQGGYEVGDINISFTNF---FLQVLAHGDKIKSQHFLVYARYIWMARNNA 928
+ CS VW + TNF + H + + +IW RN
Sbjct: 91 MTCSYITRVWFGSQLNINIDKSPITNFSDWISYAIEHNEPDITIQIADLTYHIWFDRNQR 150
Query: 929 LWNNIRDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNTSRQRHAIFPPGRLSNSGDQS 988
++ + R +A + + L Q + A+ + + P R++ +
Sbjct: 151 VFEDKRIPEEDIIHRAANSIHDFHEAHLPQNAKATLACYSGYSS----KPKRVT-----T 201
Query: 989 WQAFVDGSI-------FEQEGMQGFGAVMESEEGIFIQAIS 1022
W+ D + + +G G G + +G+ + A +
Sbjct: 202 WKKPTDNLVKMNSDANLQVDGWWGLGTIARDNKGLVLAAAT 242
>IMGA|Medtr7g068430.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
14039604-14037230 H EGN_Mt090430 20090702
Length = 514
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/368 (25%), Positives = 161/368 (43%), Gaps = 59/368 (16%)
Query: 611 GRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFH 670
G R I W++W+ +C K GG G RD+ N+++LAK WRL+ +TL+ ++ +Y
Sbjct: 9 GGRKISWVSWKVVCPPKEVGGLGVRDVSLVNLSLLAKWKWRLLQGGNTLWKEILVERYGS 68
Query: 671 N-RDFLDAPLSRRPTYVWRSIHAAMGVLKQG-VRW-------RVGNGETIGVLSHPWMPL 721
+FL+ + T R + + K V W +VGNG T G W
Sbjct: 69 KVGEFLEEGVGVWQTNASRWWKDLVSLAKGNEVDWFYEDVIRKVGNGATTGFWKTAWRG- 127
Query: 722 DHSFWVEDSRDFVDPTMK---VRELFVE--GEGRWDVGKVMTLF--SMREFRAILGI--P 772
F ++ R F T + ++E+++ G GRW LF + +LG+
Sbjct: 128 GEPFMMKLHRLFSIATFQEATIQEMWISNVGRGRWRFSWRCQLFVWEVNLLDELLGVLEG 187
Query: 773 ISINASRDQIMWHWDKKGIYSVRS------GYYVA--------RRLLRGRVHEVDGGWWG 818
+ D+ W +K I++V+S G +A RR+ R
Sbjct: 188 FELGEVEDKWRWKLEKDDIFTVKSINIKLEGRGLAEVVCPEGERRVFR------------ 235
Query: 819 KMWCLDASPKDKDFMWRALRNVLPTKERLRRRGV---EVDIGCPWCGE-EEDINHAIVLC 874
++W AS K +DF+W+AL + +PT+ R V C C + E +H + C
Sbjct: 236 QIWKTGASSKVRDFVWKALLDWIPTRVNFGIRNCLPPGVGSNCVHCMDFSESTSHLFLHC 295
Query: 875 SKAKGVWRQGGYEVGDIN-ISFTNFFL--QVLAHG---DKIKSQHFLVYARYIWM---AR 925
A+ VW D+N I N F+ + + G K+++ +++ IW+ AR
Sbjct: 296 DLARNVWLS-LMSCLDLNFIMPPNLFIHWKCWSGGPFIKKVRNGLRMIWEAGIWVIWKAR 354
Query: 926 NNALWNNI 933
N+ ++NN+
Sbjct: 355 NDRIFNNV 362
>IMGA|Medtr8g133770.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 31993480-31994567 H
EGN_Mt090430 20090702
Length = 318
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 110/259 (42%), Gaps = 22/259 (8%)
Query: 766 RAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVAR-RLLRGRVHEVDGGWWGKMWCLD 824
+AIL P+ D+I W ++ G Y+V++ Y +A LL V+G ++W ++
Sbjct: 25 QAILDRPLFAEVHNDRIAWMMERSGRYTVKTDYKLAMMELLHTDQFHVEGEC-HRIWKVN 83
Query: 825 ASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQ 883
+ K + +WR R + + RL+ R V ++ CPWC ED HA V C+ + W
Sbjct: 84 SPHKAHNLLWRICRGCVLMRLRLQSRHVLCEVLCPWCDTTVEDDWHAFVGCTVVRESWYW 143
Query: 884 GGYEVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLK 943
G + + + + L++ IW AR + +WN+ T +
Sbjct: 144 AG---------LSTVLQSRVGTANTVGRVALLLWQ--IWAARKDVIWNDAHHTSTSIGRT 192
Query: 944 AKEYMISWEHT-KLAQRSMASESSNTSRQRHAIFPPGRLSNSGDQSW-QAFVDGSIFEQE 1001
+ W+ K S+A N + ++++ R ++W VD + +++
Sbjct: 193 TLDAWQQWQEVHKQPSSSIAQHGQNRVQANNSVWEKPR------ETWLNCNVDAAFHDRQ 246
Query: 1002 GMQGFGAVMESEEGIFIQA 1020
+ F + G FI+A
Sbjct: 247 HITSFVCCVRDSRGQFIRA 265
>IMGA|Medtr7g077130.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
16025455-16024014 E EGN_Mt090430 20090702
Length = 70
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 408 GRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFF 467
GR LRQ DPLSP+LF+ CAEGLS L ++A+ + G P + HLLFADD F FF
Sbjct: 6 GRSLRQADPLSPHLFIICAEGLSSLIREAEVGEIISGTSTCSGAPLVFHLLFADDCFLFF 65
Query: 468 EG 469
+
Sbjct: 66 KA 67
>IMGA|Medtr3g010370.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
1763115-1762355 H EGN_Mt090430 20090702
Length = 169
Score = 71.2 bits (173), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 58/114 (50%)
Query: 227 PDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPI 286
PDGL F IG DI L+ P + T I L PK ++P +YR I
Sbjct: 7 PDGLTTLFINLKGETIGPDIINYVFTVLNNMGGPCNINYTFICLFPKENDPKLPSDYRSI 66
Query: 287 SLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIK 340
L V+ KIV K++AN++ ILP I QSAF+ RLI DN A++ H +K
Sbjct: 67 FLSIVVVKIVTKTIANKINTILPNFISLQQSAFLHNRLIFDNTLFAYQAFHYLK 120
>IMGA|Medtr7g089950.1 hypothetical protein
chr07_pseudomolecule_IMGAG_V3 19938157-19937405 H
EGN_Mt090430 20090702
Length = 97
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%)
Query: 211 EI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVL 270
E + F+M DKSPG +GLN FFQK W +IG +I+ WLD +F L DT + L
Sbjct: 22 EFRQPVFSMHLDKSPGSNGLNSGFFQKIWPLIGTEIFETRCLWLDACSFSPNLNDTSVAL 81
Query: 271 LPKCDNPLSLKEYRPI 286
+ + D+P S+K+ RP+
Sbjct: 82 IARADHPESMKDLRPM 97
>IMGA|Medtr1g140870.1 Polynucleotidyl transferase, Ribonuclease H fold
chr01_pseudomolecule_IMGAG_V3 31282395-31281349 H
EGN_Mt090430 20090702
Length = 309
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 97/236 (41%), Gaps = 15/236 (6%)
Query: 791 IYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRR 850
+YSV++GY + V G W +W + A K K W A LPT+ L+ R
Sbjct: 4 LYSVKAGYQWLTSHVNSNVMLAIAGSWKWIWRVAAPEKIKFLFWTAYHQSLPTRGMLQHR 63
Query: 851 GVEVDIGCPWCG-EEEDINHAIVLCSKAKGVWRQGGYEVGDINISFTNFFLQVLAHGDKI 909
G+ CP C E E+I H C A+ +W G++ +IN L G +
Sbjct: 64 GMLHSASCPRCPMENENIMHCFRDCVFARQLWLSLGFD--NINFFMEQSVSSWLRRGSES 121
Query: 910 KSQH-FLVYARYIWMARNNALWNNIRDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNT 968
++ F+ +IW ARN + T Y LK + Y +S K+ ++ +
Sbjct: 122 DNKSLFMSACWWIWRARNLLCMEDEHITIYQ--LKMEVYKLSALIHKIFTVTVPANEIGR 179
Query: 969 SRQRHAIFPPGRLSNSGDQSWQAFVDGSIFEQEGMQGFGAVMESEEGIFIQAISGH 1024
H + + N VDGS F G+ GFG V+ +G +I G+
Sbjct: 180 WTSWHPVESSATVLN---------VDGSSFGNPGISGFGGVLRRHDGSWIYGFGGN 226
>IMGA|Medtr1g089830.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
18011505-18012272 H EGN_Mt090430 20090702
Length = 179
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 769 LGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVH---EVDGGWWGKMWCLDA 825
L + + + R+ ++W+ +K G YSVRS Y + + H VDG W L
Sbjct: 29 LSLAVILFCIRNMLIWNTEKNGNYSVRSAYRICVTKIADNTHLHVSVDGNL---SWKLKV 85
Query: 826 SPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQ 883
PK K+F+WR R PT+ RL GV I C C ED H +V C K VWR
Sbjct: 86 PPKVKNFVWRVRRGCFPTRARLSSGGVAYPIDCVTCDSNYEDSIHVLVECPKVVQVWRN 144
>IMGA|Medtr1g147120.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr01_pseudomolecule_IMGAG_V3
32701852-32701244 H EGN_Mt090430 20090702
Length = 202
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 51/186 (27%), Positives = 77/186 (41%), Gaps = 9/186 (4%)
Query: 768 ILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASP 827
I +P+ D I+W+ G Y+++S Y + + R + G W +W L +P
Sbjct: 9 ICRLPLHSRTHSDTIIWNASPNGSYTIKSAYKMCVSISDQRSNYHVSGDWKLIWSLCVAP 68
Query: 828 KDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGY 886
K K F WR LR LPT+ L+ GV C C + ED H + C A W+
Sbjct: 69 KIKHFCWRLLRGCLPTRSNLQSCGVHCQSTCVVCNRDLEDEMHMFMHCKFATDCWKAANL 128
Query: 887 -----EVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYTTF 941
N SF++ +L + F+ R IW A L+ + + T+
Sbjct: 129 WSKIASYMTSNGSFSSIMFAILRSLEVDNHVGFVAILRSIWCA---CLFMGTKTSQCTSI 185
Query: 942 LKAKEY 947
L A EY
Sbjct: 186 LCASEY 191
>IMGA|Medtr1g087030.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr01_pseudomolecule_IMGAG_V3
17409058-17408195 H EGN_Mt090430 20090702
Length = 228
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 9/101 (8%)
Query: 341 SRKNQRGACALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGK 400
SRK+ RG LK+D AYD VNWE GF E W QW+ + + V +NG
Sbjct: 21 SRKSGRGLMMLKVDFKTAYDSVNWE---------GFSETWRQWISTYLASSRVPVQVNGI 71
Query: 401 EVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGR 441
+GLRQG P SP+ FL AE L++ ++ +R R
Sbjct: 72 STDKFSIPQGLRQGYPSSPFQFLIVAEELNVTKKNCRRTKR 112
>IMGA|Medtr1g016440.1 probable reverse transcriptase At2g02650 -,
related, related chr01_pseudomolecule_IMGAG_V3
3173721-3173118 H EGN_Mt090430 20090702
Length = 143
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 777 ASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRA 836
S D+++W D G+YSVRSGY +A R + H G W +W + A K ++ +WR
Sbjct: 15 VSMDKVVWQ-DSNGLYSVRSGYRIAAREVASSTHYYIQGEWNAIWKVQAPHKARNLLWRI 73
Query: 837 LRNVLPTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVLCSKAKGVWRQGG 885
+PT+ +L +R V C WC EE+ N HA V A+ W G
Sbjct: 74 CWGCIPTRSKLIQRHVPCTNRCTWCDGEEETNWHAFVGYDVARESWFFSG 123
>IMGA|Medtr1g016370.1 probable reverse transcriptase At2g02650 -,
related, related chr01_pseudomolecule_IMGAG_V3
3148938-3149541 H EGN_Mt090430 20090702
Length = 143
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 777 ASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRA 836
S D+++W D G+YSVRSGY +A R + H G W +W + A K ++ +WR
Sbjct: 15 VSMDKVVWQ-DSNGLYSVRSGYRIAAREVASSTHYYIQGEWNAIWKVQAPHKARNLLWRI 73
Query: 837 LRNVLPTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVLCSKAKGVWRQGG 885
+PT+ +L +R V C WC EE+ N HA V A+ W G
Sbjct: 74 CWGCIPTRSKLIQRHVPCTNRCTWCDGEEETNWHAFVGYDVARESWFFSG 123
>IMGA|Medtr3g030620.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
8345624-8344229 H EGN_Mt090430 20090702
Length = 222
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 15/111 (13%)
Query: 569 VLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKR 628
+L K Q I T+ MS+F +P+S C +++ MN FW G RGI+W++W+++ K
Sbjct: 1 MLNKYALQFILTHFMSLFTLPVSHCDEIERMMNSFWRCHSGGQSRGINWISWDKLSMHKN 60
Query: 629 EGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPL 679
+GG KQ WRLM P +L ++ +K +Y+ F ++ L
Sbjct: 61 DGG---------------KQSWRLMTNPISLVARTYKERYYLRCIFFESTL 96
>IMGA|Medtr3g147880.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
38411077-38409788 H EGN_Mt090430 20090702
Length = 359
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 100/238 (42%), Gaps = 17/238 (7%)
Query: 789 KGIYSVRSGYYVARRLLRGRVHEVDGGW-WGKMWCLDASPKDKDFMWRALRNVLPTKERL 847
KGIYS +S Y+ L R H+V+ + +W L S + FMW+ + LPTK L
Sbjct: 13 KGIYSTKSAYHT----LLNRFHDVENNHNFNWIWKLKVSSNIQFFMWQICLSSLPTKSIL 68
Query: 848 RRRGVEVDIGCPWC-GEEEDINHAIVLCSKAKGVWRQGGYEVGDINISFTNFFLQVLAHG 906
R + CP C EE + H ++ C+ AK VW++ + I + + + +
Sbjct: 69 VSRHIAPSATCPICNASEEAMIHCLLTCTIAKEVWKK-CFNTSLIPPADDSSLGSWVENC 127
Query: 907 DKIKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLKAKEYMISWEHTKLAQRSMASESS 966
K L+ W ARN +++ I+ F+ E + HT A + +
Sbjct: 128 FKNHGIFPLLIMWKCWCARNKFIFDGIKT---PFFIIVAECNALYMHTVKAFGIGGTCAR 184
Query: 967 NTSRQRHAIFPPGRLSNSGDQSWQAF-VDGSIFEQEGMQGFGAVMESEEGIFIQAISG 1023
+ R + D W A VDGS G GFG ++ + EG + +SG
Sbjct: 185 GSEVAREVCW------KRPDTGWIALNVDGSALTNPGAAGFGGIIRNHEGRLMLGLSG 236
>IMGA|Medtr2g055540.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
14903666-14903472 H EGN_Mt090430 20090702
Length = 64
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%)
Query: 570 LIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKRE 629
+IKS+ Q+IPTY MS+F IP SI ++K MN FWW +GI WL+W+++ KR+
Sbjct: 1 MIKSVLQSIPTYFMSIFLIPSSIGDEIEKIMNSFWWENGGNRNKGIKWLSWDKLSVHKRD 60
Query: 630 GG 631
GG
Sbjct: 61 GG 62
>IMGA|Medtr1g089700.1 reverse transcriptase, putative; 16838-20266,
related chr01_pseudomolecule_IMGAG_V3 17930727-17931209
H EGN_Mt090430 20090702
Length = 160
Score = 68.9 bits (167), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/150 (25%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 82 LKQRIENARDGFDDVTVQRLKNEWNTILFKEECRMRQIGKQRWLSWGDQNSKYFHASIKN 141
LK +I +A+ ++ ++ N +L +EE Q K +WL +GD N+K+FH
Sbjct: 3 LKNKIPDAKV---KSQIKEIETNLNDVLLQEEVWWAQRAKTQWLKYGDNNTKFFHFKASQ 59
Query: 142 RKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEESVGIE-IFNLVQPKVTAIQN 200
RK++ I + +++G D+ + I NYF+ ++S + +++ +V +
Sbjct: 60 RKKKNYIYSITDKNGREWNDDIHIHDIFTNYFADIFSTSHPTEVHNNLDVISNRVPTDRQ 119
Query: 201 NILTTPFTLDEI*EAAFNMQPDKSPGPDGL 230
L+ FT++E+ +M+ +PG DG+
Sbjct: 120 AELSADFTIEEVEATMKSMKATSAPGLDGI 149
>IMGA|Medtr4g107070.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr04_pseudomolecule_IMGAG_V3
23293240-23293037 H EGN_Mt090430 20090702
Length = 67
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 43/67 (64%)
Query: 583 MSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNM 642
MS+F +P S+ +K +N FW+G G+HW++W+++ K GG GF+DL FN+
Sbjct: 1 MSIFILPTSLIDATEKMLNGFWYGHGRLLNMGMHWMSWDKLTIHKNHGGMGFKDLKYFNI 60
Query: 643 AMLAKQG 649
AML KQG
Sbjct: 61 AMLRKQG 67
>IMGA|Medtr4g032720.1 RNA-directed DNA polymerase, related
chr04_pseudomolecule_IMGAG_V3 7955036-7954024 H
EGN_Mt090430 20090702
Length = 320
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/268 (22%), Positives = 114/268 (42%), Gaps = 21/268 (7%)
Query: 686 VWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWM--PLDHSFWVEDSRDFVDPTMKVREL 743
+W + ++ RW +GNG+ I + WM PL + + P++K
Sbjct: 46 IWLGVKDKFSMVSANTRWIIGNGDNIRLWFDNWMGSPLVT---ILALPPHLFPSLKATLA 102
Query: 744 FVEGEGRWDVGKVMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARR 803
FV +G+W++ +++ F + + IL + + ++ D+ +W G S + +A +
Sbjct: 103 FVINDGKWNIPRIILDFPLVAAQ-ILQVTLPVSPLPDKCVWLHSHDGELSSK----LAFQ 157
Query: 804 LLRGRVHEVDGGWWGKMWCLDASPKDKDFM-WRALRNVLPTKERLRRRGVEVDIGCPWC- 861
L +D W + P F+ WR + + LPT E L+ RG + CP C
Sbjct: 158 FLNPAPPNLD---WAAVIRRPCIPPSHSFIFWRFMLSKLPTDENLQLRGCTLVSMCPLCY 214
Query: 862 GEEEDINHAIVLCSKAKGVWRQGGYEVG-DINISFTNFFLQVLAHGDKIKSQHFLVYA-- 918
+ E H + C+ +K +W G ++ I ++ + L + + + LV A
Sbjct: 215 NQAESSTHLFLECAFSKTIWNWLGIKLQRSIPLASPSSLLSFIPQRCSSQLRDVLVAAIV 274
Query: 919 ---RYIWMARNNALWNNIRDTCYTTFLK 943
IW+ARN +N + + T K
Sbjct: 275 HSVHAIWLARNAVRFNASSISLHATMAK 302
>IMGA|Medtr4g114300.1 Hemopexin, related, related
chr04_pseudomolecule_IMGAG_V3 26096856-26098250 H
EGN_Mt090430 20090702
Length = 256
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 70/161 (43%), Gaps = 30/161 (18%)
Query: 1 APISDHAPLFI-QLNYRQVDNNYRRFRFDNSWVGERELDQLVKDVWCNNDSEPLLHKRDV 59
AP SD PL + Q R V ++F+F+N+W E + +V D W ++ ++ K +V
Sbjct: 36 APASDRYPLLLKQKETRCVWVPRKKFQFENAWCVEPGIHDIVSDSWLSSTCMQVVEKLEV 95
Query: 60 CIKEMERWGRQFNKIFWKQKRILKQRIENARDGFDDVTVQRLKNEWNTILFKEECRMRQI 119
C ++ W + N LKQ IEN R + CR R
Sbjct: 96 CANDLNSWSKAHNN-------GLKQEIENCRCDLN------------------RCRSRGA 130
Query: 120 G----KQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDG 156
K W GD N+KYFHAS +RK+ L+N +G
Sbjct: 131 AAYPTKTHWYHDGDLNTKYFHASTTSRKKVNPHYVLDNNEG 171
>IMGA|AC233571_22.1 hypothetical protein AC233571.2 95791-97088 H
EGN_Mt090430 20090702
Length = 158
Score = 66.6 bits (161), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 42/71 (59%)
Query: 362 VNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYL 421
VN F + GF + W++WMM+CV+ + YS+L VG I GRG+ QG PLS YL
Sbjct: 83 VNRRFFYMSTVSRGFGDTWIRWMMMCVSFITYSILRKFDRVGHIILGRGIPQGAPLSTYL 142
Query: 422 FLFCAEGLSLL 432
F+ EG LL
Sbjct: 143 FILVTEGKRLL 153
>IMGA|Medtr5g088710.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
34427458-34427919 H EGN_Mt090430 20090702
Length = 153
Score = 66.6 bits (161), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/147 (26%), Positives = 68/147 (46%), Gaps = 1/147 (0%)
Query: 696 VLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGK 755
++KQG RWR+G+G+TI +L PW+ S +++ +KV + W+
Sbjct: 2 MVKQGARWRIGSGDTIPLLDAPWLKDGRSLTMDNPMYAPLSHVKVPNIIEPSTKVWNTTL 61
Query: 756 VMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGG 815
+ +F+ + IL P+ D++ W +K G YSV S Y + + + H
Sbjct: 62 ISNMFNHNTTQLILNTPLQPLVHEDKLTWKAEKNGNYSVSSAYRICVTEIADKSHLHIPA 121
Query: 816 WWGKMWCLDASPKDKDFMWRALRNVLP 842
W L P ++F+WR + +LP
Sbjct: 122 RWNLTRKLKVPPMIRNFVWR-VSGLLP 147
>IMGA|Medtr2g122180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
29251624-29251866 H EGN_Mt090430 20090702
Length = 80
Score = 66.2 bits (160), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 280 LKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNI 339
+K R ISLCN+LYK+V+ LANRLK L + QS+F+ GR I DN +A ++ H++
Sbjct: 1 MKVLRSISLCNILYKMVSNLLANRLKHCLDKCVSGEQSSFIEGRSILDNTLIATKITHSM 60
Query: 340 KSR-KNQRGACALKIDISK 357
K + K RG L ID+ +
Sbjct: 61 KRKTKGWRGELTLDIDLVR 79
>IMGA|Medtr1g149770.1 contains similarity to reverse trancriptase,
related, related chr01_pseudomolecule_IMGAG_V3
33129977-33130712 E EGN_Mt090430 20090702
Length = 100
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 644 MLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSI-HAAMGVLKQGVR 702
MLA+QGWR++ ++LF K +YF +FL+A L P+Y WRSI M V+
Sbjct: 1 MLARQGWRIIQNEESLFGSCLKRRYFPRTNFLNATLGYNPSYTWRSILQDRMEVIDHVGL 60
Query: 703 WRVGNGETIGVLSHPWMPLDH 723
WRVG+G++ + W+P
Sbjct: 61 WRVGDGKSTKIWGDNWLPYQQ 81
>IMGA|Medtr4g160710.1 RNA-directed DNA polymerase, related, putative
chr04_pseudomolecule_IMGAG_V3 40774925-40774579 H
EGN_Mt090430 20090702
Length = 77
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/61 (50%), Positives = 40/61 (65%)
Query: 439 RGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSG 498
RG + G+KV R P +THLLF DD F F + +EA+ +++ LKKYE A Q INL KS
Sbjct: 9 RGEIHGIKVCRGAPLLTHLLFVDDCFLFCRANEKEAQALSEALKKYEEASRQPINLQKSK 68
Query: 499 I 499
I
Sbjct: 69 I 69
>IMGA|Medtr5g025230.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
10087747-10088046 H EGN_Mt090430 20090702
Length = 99
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 46/70 (65%)
Query: 640 FNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQ 699
FN A+L KQ WRL+ +++ +K+FK++YF +F+++ + +P+Y WRS+ A +
Sbjct: 15 FNKALLGKQCWRLITNTNSIIAKVFKSRYFPRSNFMESTIGYQPSYSWRSMFNAKDFIDL 74
Query: 700 GVRWRVGNGE 709
G R +GNG+
Sbjct: 75 GARSSIGNGQ 84
>IMGA|AC233668_9.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC233668.2 20356-20538 H
EGN_Mt090430 20090702
Length = 60
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 44/59 (74%)
Query: 523 IGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTY 581
+G YLGLPS++G+SK+ FGF++DR+ +I +WS++ L + +EV+IK + Q IP+Y
Sbjct: 1 MGTCKYLGLPSMMGRSKEATFGFIKDRIWHKINSWSSKCLFKVSREVMIKPVLQFIPSY 59
>IMGA|Medtr3g024820.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6346550-6346888 H EGN_Mt090430 20090702
Length = 112
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Query: 300 LANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSRKNQRGACALKIDISKAY 359
L RL K++ +I QS F+ R + D V E+I SRK+++ K+D KAY
Sbjct: 2 LVGRLAKVIHCVISANQSTFIKVRQLVDGVVAVNEIID--LSRKSKKECLTFKVDFEKAY 59
Query: 360 DRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLR 412
D V+W FL MM ++ F W W+ + SVL+NG + I RGL+
Sbjct: 60 DLVSWIFLDYMMRKLSFGVIWRCWIRDRIFSGSLSVLVNGSPMEEINIQRGLK 112
>IMGA|Medtr1g071160.1 RNA-directed DNA polymerase, putative
chr01_pseudomolecule_IMGAG_V3 14149157-14148915 H
EGN_Mt090430 20090702
Length = 80
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 43/77 (55%)
Query: 371 MLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLS 430
M +MGFC KW WM C+ VL+NG GRGLRQGDPLS +LFL AEG +
Sbjct: 1 MEKMGFCVKWRNWMSKCLRLTFMLVLVNGSPTKEFGVGRGLRQGDPLSMFLFLLAAEGFN 60
Query: 431 LLFQDAKRRGRLQGVKV 447
++ + +G ++
Sbjct: 61 VILSKSVHLDLFEGYQL 77
>IMGA|Medtr2g010180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
2418197-2417610 H EGN_Mt090430 20090702
Length = 174
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 66/140 (47%), Gaps = 22/140 (15%)
Query: 371 MLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLS 430
MLR+ F +W +W+ +CV SVL+NG + GL+Q DPL+ +LFLF EGLS
Sbjct: 1 MLRLRFPHRWCRWIRVCVFYGSLSVLVNGCPTEEVDIQGGLKQCDPLALFLFLFVVEGLS 60
Query: 431 LLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQ 490
L + A+ G KV ++ + + IL+ +E + G
Sbjct: 61 GLVRLAEATSLFHGFKV---------------------TTMANLQALKTILRCFELSSGL 99
Query: 491 AINLNKSGIFFSPNMSRELM 510
+N +KS +F N+ E +
Sbjct: 100 KVNFSKS-LFMGVNVGPEFL 118
>IMGA|Medtr5g084580.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
32212318-32210868 H EGN_Mt090430 20090702
Length = 201
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 1/123 (0%)
Query: 541 QVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRM 600
+ + + ++ ++ +W LS AG+ L KS+ +A+PTY M IP + QK
Sbjct: 17 RAYFYSPKKVRNKLASWKASHLSFAGRVNLAKSVIEAVPTYPMMSCAIPKACLQDSQKVQ 76
Query: 601 NKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLF 660
F WG + ++ +H + W M KR GG G R L N A L K GW+L ++ +
Sbjct: 77 KAFIWGDND-FQKHVHAVNWSTMTKPKRCGGLGIRRLEEMNEACLLKLGWKLRRGKNSFW 135
Query: 661 SKL 663
+ L
Sbjct: 136 TDL 138
>IMGA|Medtr1g008260.1 RNA-directed DNA polymerase, putative
chr01_pseudomolecule_IMGAG_V3 642619-642876 H
EGN_Mt090430 20090702
Length = 85
Score = 63.9 bits (154), Expect = 4e-10, Method: Composition-based stats.
Identities = 29/78 (37%), Positives = 44/78 (56%)
Query: 200 NNILTTPFTLDEI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTF 259
+N L +T++E+ EA ++ +PGPDG+ F+Q FW+VIG DI L+ G
Sbjct: 2 SNFLEADYTINEVIEATQQLKGSSAPGPDGITALFYQIFWNVIGQDILDYTLNILNKGGN 61
Query: 260 PKTLTDTHIVLLPKCDNP 277
P + T + L+PK NP
Sbjct: 62 PGQINHTFLSLIPKITNP 79
>IMGA|Medtr5g105670.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr05_pseudomolecule_IMGAG_V3
42445166-42445565 H EGN_Mt090430 20090702
Length = 118
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 13/128 (10%)
Query: 618 LAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKYFHNRDFLDA 677
L+W+R+ K G F+ L F + P++L S+LFK KYF D+L +
Sbjct: 4 LSWKRLMPPKNFDGMRFKSLKFF-------------INPNSLLSRLFKTKYFLTSDYLTS 50
Query: 678 PLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETIGVLSHPWMPLDHSFWVEDSRDFVDPT 737
L +YVWRS+ A V + +W GE + + W +DH
Sbjct: 51 SLRHNLSYVWRSVWMAKIVTQSRFKWSANIGENMSIWDLEWFEIDHHIEKSLGLHTTFKN 110
Query: 738 MKVRELFV 745
MKV +L V
Sbjct: 111 MKVSDLMV 118
>IMGA|Medtr2g049360.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
13487492-13487806 H EGN_Mt090430 20090702
Length = 104
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 30/102 (29%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 288 LCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVAVAFELIHNIKSRKNQRG 347
+ ++YK+++K L+++L K+ ++ + QS FV G I D + + + I + + KN
Sbjct: 1 MVGIMYKVLSKVLSSKLSKVTGSVVSDSQSTFVQGIHILDKILIDNKAIGDARRFKND-- 58
Query: 348 ACALKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVT 389
K+D K +D ++ + L +M+ M F W +W+M+CVT
Sbjct: 59 LLLFKVDFEKDFDSMDCKGLETLMVEMNFHTLWQKWIMVCVT 100
>IMGA|Medtr8g087490.1 RNA-directed DNA polymerase, putative
chr08_pseudomolecule_IMGAG_V3 18192188-18193266 H
EGN_Mt090430 20090702
Length = 144
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 251 KQWLDTGTFPKTLTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPL 310
+Q+ + P++ + + L+PK D+ SL E+ PISL LYK++ K LA+R ++
Sbjct: 72 QQFFFNASLPRSFSSYFMALIPKVDSSQSLWEFHPISLIGSLYKLIVKVLASRFTSVMDK 131
Query: 311 IIDECQSAFVPGR 323
II QSAF+ GR
Sbjct: 132 IISPNQSAFLKGR 144
>IMGA|Medtr2g111150.1 probable reverse transcriptase At2g02650 -,
related, putative chr02_pseudomolecule_IMGAG_V3
26303076-26303699 H EGN_Mt090430 20090702
Length = 188
Score = 62.0 bits (149), Expect = 2e-09, Method: Composition-based stats.
Identities = 48/179 (26%), Positives = 74/179 (41%), Gaps = 29/179 (16%)
Query: 766 RAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVA-RRLLRGRVHEVDGGWWGKMWCLD 824
+AIL P+ D+I W ++ G Y+V++GY +A LL V+G
Sbjct: 3 QAILDTPLFAEVQNDRITWMMERNGRYTVKTGYKLAMMELLHTDWFHVEG---------- 52
Query: 825 ASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQ 883
+ +PT+ RLR R V+ ++ CPWC ED HA V C+ A+ W
Sbjct: 53 ----------EICKGCVPTRLRLRSRYVQCEVICPWCDTAVEDDWHAFVGCTIARESWYW 102
Query: 884 GGY------EVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDT 936
G VG +F + + + + IW ARN+ +WN+ T
Sbjct: 103 AGLSTVLQTRVG-TESRLLDFVFDICCSESRDTAGRVALLLWQIWAARNDVIWNDAHHT 160
>IMGA|Medtr1g009220.1 contains similarity to reverse trancriptase,
related, related chr01_pseudomolecule_IMGAG_V3
1138065-1137052 H EGN_Mt090430 20090702
Length = 208
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 5/158 (3%)
Query: 653 MMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSI-HAAMGVLKQGVRWRVGNGETI 711
M D L S+ K +YF FL A + P+Y WRSI A + V+++ WRV +G I
Sbjct: 1 MHNDDLLISQCLKERYFPRISFLRAFVGYCPSYTWRSIMQACVDVIEKIDIWRVRDGHLI 60
Query: 712 GVLSHPWMPLD--HSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAIL 769
+ W+ H W + M V + + W+ + F E + IL
Sbjct: 61 HIWEDNWLSYQNGHKIWSPKPSNC--DIMFVSDFIHDDIRCWNAPLINDTFLPFEAQQIL 118
Query: 770 GIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRG 807
+P + +D+ +W + I+SV+S Y+ + G
Sbjct: 119 QLPFFFSQLQDEFVWDVSRSTIFSVKSAYHFLKTRCEG 156
>IMGA|AC235675_13.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235675.1 34455-34255 H
EGN_Mt090430 20090702
Length = 66
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 600 MNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTL 659
MN FWWG G + I WL+W ++ K GG GF+DL+ N+A+L KQ WRL+ P+ L
Sbjct: 1 MNSFWWGNGGGLNKEIKWLSWSKLDL-KENGGMGFKDLYMSNLALLGKQVWRLVTNPNFL 59
Query: 660 FSKL 663
++L
Sbjct: 60 VARL 63
>IMGA|Medtr3g021630.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
5450314-5449526 H EGN_Mt090430 20090702
Length = 117
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 780 DQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRN 839
DQ++W +K G YSV++ Y + + H WG +W L PK K+ +WR R+
Sbjct: 10 DQLIWRLEKNGQYSVKTAYRLCMENIADNSHLYRIENWGSIWKLKVPPKVKNLLWRICRD 69
Query: 840 VLPTKERLRRRGVEV 854
LPT+ RL +GV V
Sbjct: 70 CLPTQARLLDKGVTV 84
>IMGA|Medtr4g157980.1 contains similarity to reverse trancriptase,
related, related chr04_pseudomolecule_IMGAG_V3
39513788-39514207 H EGN_Mt090430 20090702
Length = 139
Score = 60.1 bits (144), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/106 (32%), Positives = 53/106 (50%), Gaps = 2/106 (1%)
Query: 771 IPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGK-MWCLDASPKD 829
+P+ D MW + K IYSV+SGY R + R + +W L+ P+
Sbjct: 28 LPLIKEDIEDIFMWMYTKDNIYSVKSGYNFIREWYQNRGQRTSNNTANQTIWNLNTIPRH 87
Query: 830 KDFMWRALRNVLPTKERLRRRGVEVDIGCPWC-GEEEDINHAIVLC 874
KDF+ R L + +P + L +G+ D+ CP C + E +NH I+ C
Sbjct: 88 KDFLGRILNDPVPVRYALHLKGLLNDMLCPRCVTKMETLNHVIMEC 133
>IMGA|Medtr2g114250.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
26976018-26976599 H EGN_Mt090430 20090702
Length = 193
Score = 59.7 bits (143), Expect = 8e-09, Method: Composition-based stats.
Identities = 46/179 (25%), Positives = 80/179 (44%), Gaps = 17/179 (9%)
Query: 20 NNYRRFRFDNSWVGERELDQLVKDVWCNNDSEPLLHKRDVCIKEMERWGRQ-----FNKI 74
N+ + F+ W + + ++K W N S ++ K + + WGR NKI
Sbjct: 15 NHKKLIIFEQPWAQDAWSNTILKTAWNNTQSTNIV-KLQHTLDHLYAWGRNKFCDLANKI 73
Query: 75 FWKQKRILKQRIE-NARDGFDDVTVQRLKNEWNTILFKEECRMRQIGKQRWLSWGDQNSK 133
Q + K + + ++D + V ++ + L +EE Q K WL GDQN+K
Sbjct: 74 KIIQTSLDKLKTQVPSQDCIKQIKV--METTLDEYLKQEELWRTQRAKVHWLQHGDQNTK 131
Query: 134 YFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFSTVYSAEESVGIEIFNLVQ 192
FH + RKR+ I +++ DG+ Q+ + I NYF ++ + FN+ Q
Sbjct: 132 IFHYKVSQRKRKNTITSIQDPDGNSWQETYKIYSIFSNYFQNIFDS--------FNITQ 182
>IMGA|Medtr2g085670.1 Endonuclease/exonuclease/phosphatase
chr02_pseudomolecule_IMGAG_V3 19361131-19359840 H
EGN_Mt090430 20090702
Length = 402
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 87/176 (49%), Gaps = 14/176 (7%)
Query: 4 SDHAPLFIQLNYRQVDNNYRRFR---FDNSWVGERELDQLVKDVWCNNDSEPLLHKRDVC 60
SDH PL ++L R+ +R + F++ W+ +R + VK+ W NN+ + +K C
Sbjct: 227 SDHMPLLLRLGPRKPKMRRQRIKVLHFEDWWLRDRHITDAVKEGW-NNEENNIHNKNSSC 285
Query: 61 IKEMERWGRQ-FNKIFWKQKRIL--KQRIE--NARDGFDDVTVQ--RLKNEWNTILFKEE 113
+K++ WG+ F I KRI+ K+R++ N R D + ++ R + + +L EE
Sbjct: 286 VKDLTEWGKDGFGDI---SKRIVNTKKRLDELNGRSRQDGIIIEIRRQQVILDDLLESEE 342
Query: 114 CRMRQIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQIT 169
Q + WL GD+N+ +FH RK + + ++ G + D + ++
Sbjct: 343 IWWAQRSRAMWLKHGDKNTSFFHQKASQRKAKNWAETIIDDHGKVFTDEKEIARVV 398
>IMGA|Medtr3g030650.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
8360899-8363574 H EGN_Mt090430 20090702
Length = 139
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 410 GLRQGDPLSPYLFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEG 469
G++QGDPL+P+ FL AE LS+ + A+ G KV R S+THL + DD+FFF
Sbjct: 68 GIQQGDPLTPFFFLPVAEALSMYVKKAEALGICTSFKVSRFGLSVTHLQYVDDTFFFIGK 127
Query: 470 SLQE 473
+ E
Sbjct: 128 TAME 131
>IMGA|Medtr5g086160.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
33033257-33037285 E EGN_Mt090430 20090702
Length = 178
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 4/101 (3%)
Query: 783 MWHWDKKGIYSVRSGYYVARRL-LRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVL 841
MW D G+Y+VRSG RL + G+ H G W +W PK ++ WR R L
Sbjct: 1 MWLADMSGVYTVRSGCNFGMRLAVEGKNHVT--GDWSSLWHTRVPPKTRNLAWRICRRCL 58
Query: 842 PTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVLCSKAKGVW 881
PT+ RL R V+ + C C ++ D + H + C W
Sbjct: 59 PTRRRLHERRVQGPLNCAVCEDQVDDDWHLLFHCKTMAEYW 99
>IMGA|Medtr3g106940.1 Ribonuclease H chr03_pseudomolecule_IMGAG_V3
27054842-27053784 E EGN_Mt090430 20090702
Length = 348
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 89/246 (36%), Gaps = 37/246 (15%)
Query: 801 ARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPW 860
+R+L+ H W +W L K K +W A +NV+PT L RR + C
Sbjct: 18 SRQLISSLAHPS----WSWIWNLQVPEKYKFLIWLACQNVVPTLSLLHRRNIAPSPTCAR 73
Query: 861 CGEE-EDINHAIVLCSKAKGVWRQGGYEVGDINISFTNFFLQVLAHG------DKIKSQH 913
CGEE E H + C ++ +W++ G+ D FF AH
Sbjct: 74 CGEEDETFLHCVRDCHFSRSIWQKIGFTCND-------FFTATSAHDWFKIGMSSSLPDI 126
Query: 914 FLVYARYIWMARNNALWNN----IRDTCYTTFLKAKEYMISWEHTKLAQRSMASESSNTS 969
F ++W RN NN + C A + +++ + E+ N S
Sbjct: 127 FFAGLWWVWRHRNLMCLNNENMSLFRLCNNIVSAAADINSAFD---------SEENVNHS 177
Query: 970 RQRHAIFPPGRLSNSGDQSWQAFVDGSIFEQEGMQGFGAVMESEEGIFIQAISGHFTGGM 1029
+ F N D VDGS G+G ++ + G+ I SG
Sbjct: 178 DR----FVKWNNRNHHDHILN--VDGSCLGTPSRTGYGDILRNSAGLLISGFSGFIPNST 231
Query: 1030 DPFIAE 1035
D AE
Sbjct: 232 DILQAE 237
>IMGA|Medtr8g109700.1 RNA-directed DNA polymerase (Reverse
transcriptase) chr08_pseudomolecule_IMGAG_V3
24673361-24673122 H EGN_Mt090430 20090702
Length = 79
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 311 IIDECQSAFVPGRLISDNVAVAFELIHNIKSRKNQRGACALKIDISKAYDRVNWEFLRGM 370
+I QSAF+ GR + D V ++I +RK ++ K+D KAYD V+W FL M
Sbjct: 4 LISSNQSAFIKGRQLVDGVVTVNKIIDV--ARKTKKECLIFKVDFEKAYDSVSWSFLDYM 61
Query: 371 MLRMGFCEKWVQWMMLCV 388
M +G ++W +W+ CV
Sbjct: 62 MRILGVSDRWCRWIRACV 79
>IMGA|Medtr4g134320.1 RNA-directed DNA polymerase, related, related
chr04_pseudomolecule_IMGAG_V3 32379758-32380006 H
EGN_Mt090430 20090702
Length = 82
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%)
Query: 425 CAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKY 484
CA GLS L +++ G + +KV R P +THLL F F+ +L E+ ++ ++L Y
Sbjct: 2 CAVGLSALLKESGGSGDIHDIKVCRGAPILTHLLLLMIDFLFWRANLSESTKIKEVLCYY 61
Query: 485 ERALGQAINLNKSGIF 500
+ G+AIN KS I
Sbjct: 62 KAVSGKAINFQKSKIL 77
>IMGA|Medtr2g005350.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
191396-191058 H EGN_Mt090430 20090702
Length = 112
Score = 57.8 bits (138), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 46/88 (52%)
Query: 211 EI*EAAFNMQPDKSPGPDGLNPAFFQKFWHVIGDDIWRDCKQWLDTGTFPKTLTDTHIVL 270
EI +A +M+ K PG D P F++ FW VIG+++ G T ++
Sbjct: 24 EIYQALMSMKSYKVPGLDEFQPIFYKMFWEVIGNNVCSFVSSTFKRGIVDPYYVATLMMF 83
Query: 271 LPKCDNPLSLKEYRPISLCNVLYKIVAK 298
+ DNP SLK+ R + C+V YK+V+K
Sbjct: 84 IFIVDNPHSLKKSRLFNFCDVNYKLVSK 111
>IMGA|Medtr8g128940.1 RNA-directed DNA polymerase, related
chr08_pseudomolecule_IMGAG_V3 30299266-30298795 H
EGN_Mt090430 20090702
Length = 120
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 756 VMTLFSMREFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGG 815
+ +FS E IL IP+S D+ +WHW++ G +SVRS +++ + + E
Sbjct: 18 IKEIFSEFEANQILNIPLSWRLPSDKRVWHWERNGNFSVRSAHHLIKDVDARNTLEASST 77
Query: 816 ----WWGKMWCLDASPKDKDFMWRALRNVLPTKERLRRRGV 852
W +W + A K+F+ R R++LP + RL+R+G+
Sbjct: 78 NGQEIWKAVWRIKAPHSVKNFLRRLTRDILPARCRLKRKGL 118
>IMGA|Medtr2g055530.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 14903417-14903223 H
EGN_Mt090430 20090702
Length = 64
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%)
Query: 653 MMEPDTLFSKLFKAKYFHNRDFLDAPLSRRPTYVWRSIHAAMGVLKQGVRWRVGNGETI 711
M +P+ L ++LFKA Y+ +A +YVW+SIH A+ ++KQG +W +GNG+ I
Sbjct: 1 MSQPELLVARLFKAWYYPRNYIFEAKKGHNSSYVWKSIHEAIPMVKQGTQWTIGNGDKI 59
>IMGA|Medtr8g006140.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
577887-575821 H EGN_Mt090430 20090702
Length = 278
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 766 RAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLL----RGRVHEVDGGWWGKMW 821
+AIL P+ + D+I+W ++ G Y+V++ Y +A L R + E D G
Sbjct: 3 QAILDTPLFVEVQNDRIVWMMERNGRYTVKTDYKLAMMELLHTDRFHLKENDIG------ 56
Query: 822 CLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGV 880
+ R +PT+ LR R V+ ++ CPWC ED HA V C +
Sbjct: 57 --------------SGRGCVPTRLLLRSRHVQCEVICPWCDTAVEDDWHAFVGCMVS--- 99
Query: 881 WRQGGYEVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYTT 940
S +F + + S + IW+ARN+ +WN+ T +
Sbjct: 100 -------------SLADFVFDICCSESRDISGRVALLHWKIWVARNDIIWNDAHHTSTSI 146
Query: 941 FLKAKEYMISWEHTKLAQRSMASESSNTSRQRHAIFPPGRLS--NSGDQSW-QAFVDGSI 997
A + W+ + + Q G +S + W + VD +
Sbjct: 147 GRTALDAWQQWQEVHKHPSPVVVQHRQNRVQ-------GNISIWEKPSEMWLKCNVDATF 199
Query: 998 FEQEGMQGFGAVMESEEGIFIQA 1020
+ + F + G FI+A
Sbjct: 200 HDHNHLTSFVCCVRDFHGQFIRA 222
>IMGA|Medtr8g005870.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
490235-488169 H EGN_Mt090430 20090702
Length = 278
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 51/263 (19%)
Query: 766 RAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLL----RGRVHEVDGGWWGKMW 821
+AIL P+ + D+I+W ++ G Y+V++ Y +A L R + E D G
Sbjct: 3 QAILDTPLFVEVQNDRIVWMMERNGRYTVKTDYKLAMMELLHTDRFHLKENDIG------ 56
Query: 822 CLDASPKDKDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGV 880
+ R +PT+ LR R V+ ++ CPWC ED HA V C +
Sbjct: 57 --------------SGRGCVPTRLLLRSRHVQCEVICPWCDTAVEDDWHAFVGCMVS--- 99
Query: 881 WRQGGYEVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYTT 940
S +F + + S + IW+ARN+ +WN+ T +
Sbjct: 100 -------------SLADFVFDICCSESRDISGRVALLHWKIWVARNDIIWNDAHHTSTSI 146
Query: 941 FLKAKEYMISWEHTKLAQRSMASESSNTSRQRHAIFPPGRLS--NSGDQSW-QAFVDGSI 997
A + W+ + + Q G +S + W + VD +
Sbjct: 147 GRTALDAWQQWQEVHKHPSPVVVQHRQNRVQ-------GNISIWEKPSEMWLKCNVDATF 199
Query: 998 FEQEGMQGFGAVMESEEGIFIQA 1020
+ + F + G FI+A
Sbjct: 200 HDHNHLTSFVCCVRDFHGQFIRA 222
>IMGA|Medtr7g077740.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
16448205-16447339 E EGN_Mt090430 20090702
Length = 254
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 82/197 (41%), Gaps = 19/197 (9%)
Query: 768 ILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASP 827
I G+ + N S D+ W D G YSV Y+ L + D +W
Sbjct: 34 INGVILQHNIS-DRWQWDSDYGGGYSVGGAYH----HLTTQAEPPDVPLGDLIWHKQVPL 88
Query: 828 KDKDFMWRALRNVLPTKERLRRRGV---EVDIGCPWCGEEEDINHAIVLCSKAKGVWR-- 882
K F WR LR+ LPTK L RRG+ E + CG EE +H + C+ +W
Sbjct: 89 KVSIFAWRLLRDRLPTKNHLFRRGIINSEACMCVTGCGMEETTSHLFIHCTTFGSLWHLI 148
Query: 883 -----QGGYEVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMA---RNNALWNNIR 934
G + +IN F F+ H +S L++ +W+ RNN L+NNI+
Sbjct: 149 RSLIGMSGADPFNINDHFIQ-FIHSTGHSKARQSFLQLIWLLCVWVVWNERNNRLFNNIQ 207
Query: 935 DTCYTTFLKAKEYMISW 951
T K + + + W
Sbjct: 208 TTVDNLADKVRFHSLWW 224
>IMGA|Medtr3g076330.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
17637941-17639415 E EGN_Mt090430 20090702
Length = 123
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 111 KEECRMRQIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITL 170
K C+ + +WL GD NSK+FH + +R+ I + ED I + + +
Sbjct: 6 KRTCQSLNQSRSQWLREGDANSKFFHFIMFSRRHFNTICSVLVEDVRI-EGVEPVRNAIF 64
Query: 171 NYFSTVYSAEESVGIEIFNLVQPKVTAIQNNILTTPFTLDEI*EAAFNMQPDKSPGPDG 229
+F+ + ++ V I NL ++ L PF++DE+ EA ++ KSPGPDG
Sbjct: 65 THFAQHFKSQNVVRPSISNLRFRVLSVTAGGGLIKPFSVDEVKEAIWDCDSYKSPGPDG 123
>IMGA|AC235488_20.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235488.1 85313-83267 H
EGN_Mt090430 20090702
Length = 380
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 381 VQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRG 440
+ WM C+ + VL+NG I RGL+QGDPL+ +L L AE + + +A
Sbjct: 1 MAWMKPCIFEWSMLVLVNGSLAVKIDIRRGLKQGDPLALFLLLLMAESFNGVISNAMSHN 60
Query: 441 RLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIF 500
+G K+ I+HL + DD+ E S+ +V K+ ++ Q IN+
Sbjct: 61 LFKGFKIKNEGGGISHLQYMDDALSIGEASMPSGLKV-----KFYKSCLQGINV------ 109
Query: 501 FSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNR 560
FS + M + LN + YLGL + K + ++L +++ +W N+
Sbjct: 110 FS-----KFMGMVCKFLNCIERVMPLKYLGLSVGVNPLKLVTWEPTLEQLSQKLQSWGNK 164
>IMGA|AC235488_13.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235488.1 57815-55346 H
EGN_Mt090430 20090702
Length = 380
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 381 VQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRG 440
+ WM C+ + VL+NG I RGL+QGDPL+ +L L AE + + +A
Sbjct: 1 MAWMKPCIFEWSMLVLVNGSLAVKIDIRRGLKQGDPLALFLLLLMAESFNGVISNAMSHN 60
Query: 441 RLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIF 500
+G K+ I+HL + DD+ E S+ +V K+ ++ Q IN+
Sbjct: 61 LFKGFKIKNEGGGISHLQYMDDALSIGEASMPSGLKV-----KFYKSCLQGINV------ 109
Query: 501 FSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNR 560
FS + M + LN + YLGL + K + ++L +++ +W N+
Sbjct: 110 FS-----KFMGMVCKFLNCIERVMPLKYLGLSVGVNPLKLVTWEPTLEQLSQKLQSWGNK 164
>IMGA|AC235488_29.1 RNA-directed DNA polymerase (reverse
transcriptase), related AC235488.1 131244-129198 H
EGN_Mt090430 20090702
Length = 380
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 81/180 (45%), Gaps = 16/180 (8%)
Query: 381 VQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLFCAEGLSLLFQDAKRRG 440
+ WM C+ + VL+NG I RGL+QGDPL+ +L L AE + + +A
Sbjct: 1 MAWMKPCIFEWSMLVLVNGSLAVKIDIRRGLKQGDPLALFLLLLMAESFNGVISNAMSHN 60
Query: 441 RLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERALGQAINLNKSGIF 500
+G K+ I+HL + DD+ E S+ +V K+ ++ Q IN+
Sbjct: 61 LFKGFKIKNEGGGISHLQYMDDALSIGEASMPSGLKV-----KFYKSCLQGINV------ 109
Query: 501 FSPNMSRELMTNISTILNVAGSIGGGNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNR 560
FS + M + LN + YLGL + K + ++L +++ +W N+
Sbjct: 110 FS-----KFMGMVCKFLNCIERVMPLKYLGLSVGVNPLKLVTWEPTLEQLSQKLQSWGNK 164
>IMGA|Medtr6g009380.1 hypothetical protein
chr06_pseudomolecule_IMGAG_V3 1542043-1542210 H
EGN_Mt090430 20090702
Length = 55
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 370 MMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRGLRQGDPLSPYLFLF 424
MM+ + F +W + +C+ + Y +L+NG+ G + P RGL+QGDPLS YLF+
Sbjct: 1 MMINLCFHNRWANTISICMESIYYQMLVNGEREGHVVPKRGLKQGDPLSRYLFIL 55
>IMGA|Medtr5g022410.1 Leucine-rich repeat
chr05_pseudomolecule_IMGAG_V3 8738399-8741638 E
EGN_Mt090430 20090702
Length = 639
Score = 55.8 bits (133), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 73/163 (44%), Gaps = 16/163 (9%)
Query: 776 NASRDQIMWHWDKKGIYSVRSGYYVARRL--LRGRVHEVDGGWWGKMWCLDASPKDKDFM 833
N D +W + +G+++V+S Y L L + D + ++W A K F
Sbjct: 365 NHENDSWVWKGEAEGVFTVKSMYKKLEGLFILEDTWGDEDRRVFHQLWKSPAPSKVIAFS 424
Query: 834 WRALRNVLPTKERLRRRGV---EVDIGCPW-CGEEEDINHAIVLCSKAKGVWRQGGYEVG 889
W+ L + +PT+ L RR EV + C W GE E H + CS A+GVW + + V
Sbjct: 425 WKMLLDRIPTRTNLSRRNALPPEVPLNCVWRVGEREMTKHLFLHCSLARGVWLRLMHWVD 484
Query: 890 DINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNN 932
+ I N L+++ H IW ARN+ ++ +
Sbjct: 485 IMFIMPNNLGLKLVWHAT----------IWLIWKARNDLIFKD 517
>IMGA|Medtr3g138260.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
35326334-35325873 H EGN_Mt090430 20090702
Length = 153
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 5/143 (3%)
Query: 60 CIKEMERWGRQFNKIFWKQKRILKQRIENARDGFDD----VTVQRLKNEWNTILFKEECR 115
+ ++ RW R + R+L+ +E + G + +++L+ + + +L +EE
Sbjct: 11 TLDQLHRWSRDKFGDVPSKIRMLQNTLEALKKGIPTKDCILKIKQLEVDLDDLLKQEELW 70
Query: 116 MRQIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKLENEDGDIVQDNDSLEQITLNYFST 175
Q K WL GD N+KYFH RKR+ I ++++ G+ QD++ + I N+F
Sbjct: 71 WAQRAKVHWLKHGDLNTKYFHHKASQRKRKNYISNIQDQSGNFWQDSNKIHSIFSNHFQN 130
Query: 176 VYSAEE-SVGIEIFNLVQPKVTA 197
++S+ + ++ V+ +V +
Sbjct: 131 IFSSSHYNDNSNVYEAVKNRVNS 153
>IMGA|Medtr7g080740.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
17251172-17255125 E EGN_Mt090430 20090702
Length = 230
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 82/192 (42%), Gaps = 20/192 (10%)
Query: 764 EFRAILGIPISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKM-WC 822
E RA+L + D+ W D Y+VR Y + L V ++GG G++ W
Sbjct: 14 ECRALLDNVVVQYNVYDRWQWDPDPHEGYTVRGAY---QALTSMEVPTIEGG--GELIWH 68
Query: 823 LDASPKDKDFMWRALRNVLPTKERLRRRGV--EVDIGC-PWCGEEEDINHAIVLCSKAKG 879
K WR L++ LPT+ L+RRG+ + C CG EE +H + C
Sbjct: 69 KQVPLKVSILAWRMLKDKLPTRSNLQRRGILAAANTTCLSGCGLEETASHIFLYCEVFGS 128
Query: 880 VWRQGGYEVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYT 939
+W+ +G + + FLQ++ +L+ IW RNN L+ NI
Sbjct: 129 LWQHIRSWIG-MTLKARRSFLQLI----------WLLCVWLIWNERNNRLFKNIETLIIQ 177
Query: 940 TFLKAKEYMISW 951
KAK + + W
Sbjct: 178 MLEKAKYHSLWW 189
>IMGA|Medtr3g149300.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
39012800-39013657 H EGN_Mt090430 20090702
Length = 264
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
Query: 576 QAIPTYCMSVFKIPLSICVTMQKRMNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFR 635
AI + + K+P + + F WG G ++ I W+AW+ C K EGG G R
Sbjct: 3 SAILIFYLGFMKMPTKVWKKVVAIQRSFLWGGANGSKK-ICWVAWKDACKPKMEGGLGVR 61
Query: 636 DLHCFNMAMLAKQGWRLMMEPDTLFSKLFKAKY 668
DL N+A+L K W L+ + ++ + A+Y
Sbjct: 62 DLRLVNLALLGKWRWILLQKETGVWRMIIAARY 94
>IMGA|Medtr3g025270.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
6508962-6510031 H EGN_Mt090430 20090702
Length = 291
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 41/64 (64%)
Query: 271 LPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPGRLISDNVA 330
+ + D+P + ++RPIS +YKI+A LANRL+ ++ +I + QSAF G+ I D +
Sbjct: 162 VEEVDSPQCVNDFRPISFVGCMYKILANVLANRLRTVIGTVIFDSQSAFDRGKQILDGII 221
Query: 331 VAFE 334
+A E
Sbjct: 222 IANE 225
>IMGA|Medtr6g015400.1 probable reverse transcriptase At2g02650 -,
related, related chr06_pseudomolecule_IMGAG_V3
3835970-3836323 H EGN_Mt090430 20090702
Length = 117
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 774 SINASRDQIMWHWDKKGIYSVRSGY-YVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDF 832
S+ + D+++ +++ KG Y+V+ Y Y L+ + + W +MW + S K F
Sbjct: 3 SLQENDDKLVSNFNNKGRYTVKPTYKYDMETLVNNEQYRISVDWM-RMWKIRVSQSRKVF 61
Query: 833 MWRALRNVLPTKERLRRRGVEVDIGCPWC--GEEEDINHAIVLCSKAKGVWRQG 884
+WR LR V PT L+ RG+ CP C E D N +++ + + + G
Sbjct: 62 LWRELRGVFPTHVSLQVRGIPCSDICPHCETNYENDYNTCLLVVKRQNNMAKGG 115
>IMGA|Medtr3g097880.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
23554988-23554803 H EGN_Mt090430 20090702
Length = 61
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 29/46 (63%), Positives = 33/46 (71%), Gaps = 1/46 (2%)
Query: 318 AFVPGRLISDNVAVAFELIHNIK-SRKNQRGACALKIDISKAYDRV 362
AFV R I DNV A E+IH++K RK + G ALKIDISKAYDRV
Sbjct: 15 AFVENRSIIDNVIAAHEVIHHMKCKRKGKVGEVALKIDISKAYDRV 60
>IMGA|Medtr3g086350.1 N-6 Adenine-specific DNA methylase
chr03_pseudomolecule_IMGAG_V3 20173394-20172638 H
EGN_Mt090430 20090702
Length = 131
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 34/64 (53%)
Query: 351 LKIDISKAYDRVNWEFLRGMMLRMGFCEKWVQWMMLCVTDVKYSVLLNGKEVGPIRPGRG 410
K+ K YD +NW FL M R+GF +W W+ C+ VL+NG + I RG
Sbjct: 68 FKVGFKKPYDSINWSFLDYMRTRLGFSARWCNWIQTCLFCGNLFVLVNGCSIEEINIQRG 127
Query: 411 LRQG 414
L+QG
Sbjct: 128 LKQG 131
>IMGA|Medtr2g056130.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 15253178-15253955 H
EGN_Mt090430 20090702
Length = 128
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 772 PISINASRDQIMWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKD 831
P+ + +D+++W +K G Y VRS Y + + H W ++W L+ K +
Sbjct: 43 PLIQSVYKDKLIWKAEKDGQYLVRSSYRLCVNTIVDNSHLHKPSGWNEIWKLEVPSKVNN 102
Query: 832 FMWRALRNVLPTKERLRRRG 851
F+WR RN LPT RL RG
Sbjct: 103 FVWRVCRNCLPTWARLTYRG 122
>IMGA|Medtr8g021560.1 hypothetical protein
chr08_pseudomolecule_IMGAG_V3 4040558-4040926 H
EGN_Mt090430 20090702
Length = 83
Score = 53.9 bits (128), Expect = 4e-07, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 421 LFLFCAEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFF 467
LF+ CAEGL L + + G L GVK+ RN IT +LFADD F FF
Sbjct: 27 LFILCAEGLCALIKYVEASGELHGVKICRNTLIITRILFADDYFLFF 73
>IMGA|Medtr2g104180.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
24503551-24503384 H EGN_Mt090430 20090702
Length = 55
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 37/52 (71%)
Query: 540 KQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLS 591
K +F +++DR+ KRI +W + L +AG+E+LIK + Q +P Y MS+F + +S
Sbjct: 2 KVIFNYVRDRIWKRIESWHGKHLFKAGREILIKFVVQLVPAYQMSIFLLLMS 53
>IMGA|Medtr2g129530.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr02_pseudomolecule_IMGAG_V3
31333511-31334185 H EGN_Mt090430 20090702
Length = 122
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 600 MNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWR 651
MN FWWG G + I WL+W ++ K GG GF+DL+ N+A+L KQ WR
Sbjct: 1 MNSFWWGNGGGLNKEIKWLSWSKLDL-KENGGMGFKDLYMSNLALLGKQVWR 51
>IMGA|Medtr8g109710.1 reverse transcriptase - beet retrotransposon,
putative chr08_pseudomolecule_IMGAG_V3 24674546-24673629
H EGN_Mt090430 20090702
Length = 305
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 3 ISDHAPLFIQLNYRQVDNNYRRFRFDNSWVGERELDQLVKDVWCNNDSEP-------LLH 55
+SDH+P + L Y + FRF+N W+ R+ ++V+ W N S P L
Sbjct: 82 VSDHSP--VVLRYSSQSWGPKPFRFNNFWLSHRDFGEVVQRSW--NRSRPPEWMAVRLST 137
Query: 56 KRDVCIKEMERWGRQ-FNKI------FWKQKRILKQRIENA--RDGFDDVTVQRLKNEWN 106
K +++ W Q F ++ + +L+ R+E + + + + W
Sbjct: 138 KLKTLKGDLKYWHSQAFGRLEGRIEELVEALNLLELRVERSPLSSADSEAKFKGFHDLW- 196
Query: 107 TILFKEECRMRQIGKQRWLSWGDQNSKYFHASIKNRKRRAKILKL 151
+L E ++ Q RWL GD NS YFH++I R+RR IL L
Sbjct: 197 ALLRARESQLFQQSCSRWLREGDANSAYFHSNINLRRRRNSILAL 241
>IMGA|AC235567_38.1 hypothetical protein AC235567.1 139216-138758 H
EGN_Mt090430 20090702
Length = 84
Score = 52.8 bits (125), Expect = 1e-06, Method: Composition-based stats.
Identities = 28/67 (41%), Positives = 37/67 (55%)
Query: 428 GLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYERA 487
GLS+L A+ + VK+ R I HLLF DDSF FF + EA+ + +L Y A
Sbjct: 18 GLSVLLHRAQLECNIHIVKICRGSAIINHLLFVDDSFIFFRENEGEAQHRHHMLNVYADA 77
Query: 488 LGQAINL 494
GQ IN+
Sbjct: 78 SGQCINI 84
>IMGA|Medtr8g026870.1 Polynucleotidyl transferase, Ribonuclease H
fold, putative chr08_pseudomolecule_IMGAG_V3
5935308-5934228 H EGN_Mt090430 20090702
Length = 292
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 64/128 (50%), Gaps = 4/128 (3%)
Query: 714 LSHPWMPLDHSFWVEDSRDFVDPTMKVRELFVEGEGRWDVGKVMTLFSMREFRAILGIPI 773
++ W+ H W++ + + V +L + E WD+ K+ +LF+ +AIL P+
Sbjct: 1 MNDSWIRGVHGSWIQSPQSHDVHNLHVSDLIADEERVWDIDKIESLFTDDMVQAILDTPL 60
Query: 774 SINASRDQIMWHWDKKGIYSVRSGYYVA-RRLLRGRVHEVDGGWWGKMWCLDASPKDKDF 832
D+I W ++ G Y+V++ Y + +LL V+G W ++W +++ K ++
Sbjct: 61 FSEVQNDRITWMMERNGRYTVKTDYKLTMMKLLHNDRFHVEGE-WHRIWNVNSPHKARNM 119
Query: 833 MWRALRNV 840
R R+V
Sbjct: 120 --RESRDV 125
>IMGA|Medtr6g031250.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr06_pseudomolecule_IMGAG_V3
7154274-7154825 H EGN_Mt090430 20090702
Length = 183
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 78/183 (42%), Gaps = 16/183 (8%)
Query: 833 MWRALRNVLPTKERLRRRGVEVDIGCPWCGEEEDIN-HAIVLCSKAKGVWRQGGY----- 886
MW R+ LP +RL +GVE C C N H ++C+ + WR+
Sbjct: 1 MWHLGRDCLPIGQRLNCKGVECTSNCVICQSYTKYNWHLFLVCADSITCWRKVNIWSLLE 60
Query: 887 EVGDINISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNNIRDTCYTTFLKAKE 946
E+ D SF + F ++ + F + + IW RN LW N ++ +A+
Sbjct: 61 ELMDGAESFGDVFTRMWQRLLVEQLMSFSMTSWSIWKKRNLKLWKNKIESLDQILQRAQV 120
Query: 947 YMISWEHTKLAQRSMASESSNTSRQRHA-IFPPGRLSNSGDQSWQAFVDGSIFEQEGMQG 1005
+ +WE + Q+S + T +Q HA ++ P R + VD +IF + +
Sbjct: 121 VLNAWEWARRVQQS----HTMTQQQTHATVWQPPRAGLL-----KCNVDATIFTVDRIIS 171
Query: 1006 FGA 1008
GA
Sbjct: 172 MGA 174
>IMGA|Medtr7g040130.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
9574348-9570239 H EGN_Mt090430 20090702
Length = 81
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 263 LTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPG 322
+ D I L+PK + +K++R I++CNV YK + K +A+RL+ + I CQS+FVP
Sbjct: 14 INDKFIFLIPKKEVVTFVKDFRHINICNVSYKKITKIIAHRLRFGMSKINGPCQSSFVPA 73
Query: 323 RLISDNV 329
DN+
Sbjct: 74 GESGDNI 80
>IMGA|Medtr7g039930.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr07_pseudomolecule_IMGAG_V3
9405780-9401671 H EGN_Mt090430 20090702
Length = 81
Score = 52.0 bits (123), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 41/67 (61%)
Query: 263 LTDTHIVLLPKCDNPLSLKEYRPISLCNVLYKIVAKSLANRLKKILPLIIDECQSAFVPG 322
+ D I L+PK + +K++R I++CNV YK + K +A+RL+ + I CQS+FVP
Sbjct: 14 INDKFIFLIPKKEVVTFVKDFRHINICNVSYKKITKIIAHRLRFGMSKINGPCQSSFVPA 73
Query: 323 RLISDNV 329
DN+
Sbjct: 74 GESGDNI 80
>IMGA|Medtr2g014330.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 3620402-3620930 H
EGN_Mt090430 20090702
Length = 89
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 600 MNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTL 659
+N F W + +G+ WL W+++ SK++G GFR+ + F +
Sbjct: 2 INSFGWCNEGNKNKGVKWLFWDKLSTSKKDGCMGFRNPYIF----------------KAM 45
Query: 660 FSKLFKAKYFHNR-DFLDAPLSRRPTYVWRSIHAAMGVLKQGVR 702
++ +FKA Y + L+A Y+WRSI +LKQ VR
Sbjct: 46 YNLIFKAMYLTVQISLLEASWGSNSIYLWRSICKTNPILKQRVR 89
>IMGA|Medtr2g013680.1 hypothetical protein
chr02_pseudomolecule_IMGAG_V3 3141918-3141390 H
EGN_Mt090430 20090702
Length = 89
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 17/104 (16%)
Query: 600 MNKFWWGKKEGGRRGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTL 659
+N F W + +G+ WL W+++ SK++G GFR+ + F +
Sbjct: 2 INSFGWCNEGNKNKGVKWLFWDKLSTSKKDGCMGFRNPYIF----------------KAM 45
Query: 660 FSKLFKAKYFHNR-DFLDAPLSRRPTYVWRSIHAAMGVLKQGVR 702
++ +FKA Y + L+A Y+WRSI +LKQ VR
Sbjct: 46 YNLIFKAMYLTVQISLLEASWGSNSIYLWRSICKTNPILKQRVR 89
>IMGA|Medtr3g098050.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
23637089-23637874 H EGN_Mt090430 20090702
Length = 200
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 69/162 (42%), Gaps = 22/162 (13%)
Query: 734 VDPTMKVRELFVEGEGR-----------WDVGKVMTLFSMREFRAILGIPISINASRDQI 782
V+ V E+FV+G G WD + M + E R +L I + + + DQ
Sbjct: 42 VNKNQTVAEMFVKGWGNGGEAWEWRRRLWDWEEEM----VTECRLLLDIVVFQDTTGDQW 97
Query: 783 MWHWDKKGIYSVRSGYYVARRLLRGRVHEVDGGWWGKMWCLDASPKDKDFMWRALRNVLP 842
W + G Y VRS Y + + ++ V G +W K+ F WR LRN LP
Sbjct: 98 RWRLENSGSYYVRSVYELLTKAENALMNAVSG----LIWHRYVPLKEFIFAWRLLRNRLP 153
Query: 843 TKERLRRRGV---EVDIGCPWCGEEEDINHAIVLCSKAKGVW 881
TK L RG+ + + CGE + +H V C +W
Sbjct: 154 TKVNLVARGMIDSDDHLCVSGCGEVDTDHHLFVSCPIFGDLW 195
>IMGA|Medtr3g013410.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr03_pseudomolecule_IMGAG_V3
2559713-2560955 H EGN_Mt090430 20090702
Length = 176
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 610 GGR---RGIHWLAWERMCCSKREGGRGFRDLHCFNMAMLAKQGWRLMMEPDTLFSKLFKA 666
GGR R I W+ W+ +C S+ EGG G R L FN+ +L K WR++++ + L+ + KA
Sbjct: 40 GGRLDFRKIAWVDWDSICLSREEGGLGVRKLREFNVELLRKWCWRMLVDKEGLWYLVLKA 99
Query: 667 KY 668
+Y
Sbjct: 100 RY 101
>IMGA|Medtr5g038940.1 RNA-directed DNA polymerase (reverse
transcriptase), related chr05_pseudomolecule_IMGAG_V3
16454846-16455376 H EGN_Mt090430 20090702
Length = 125
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 3/85 (3%)
Query: 426 AEGLSLLFQDAKRRGRLQGVKVGRNCPSITHLLFADDSFFFFEGSLQEAEEVNDILKKYE 485
AE LS+ + + G KVGR+ S+THL + DD+ F + ++++ + IL+ +E
Sbjct: 37 AEALSMFVRKTEMVGMFTDFKVGRSGLSVTHLQYVDDALFIGKATMEKLWAIKTILRCFE 96
Query: 486 RALGQAINLNKS---GIFFSPNMSR 507
ALG +N KS GI N R
Sbjct: 97 LALGLRVNFAKSCIMGISIGANSKR 121
>IMGA|Medtr1g064980.1 RNA-directed DNA polymerase ; Ribonuclease H,
related chr01_pseudomolecule_IMGAG_V3 12753081-12752276
H EGN_Mt090430 20090702
Length = 137
Score = 50.4 bits (119), Expect = 4e-06, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 41/81 (50%)
Query: 526 GNYLGLPSLIGKSKKQVFGFLQDRLEKRIGNWSNRFLSRAGKEVLIKSIAQAIPTYCMSV 585
G+Y G P + G+ + V+ + D++ K + W L++ G+ L+KS+ I Y + +
Sbjct: 40 GHYPGFPLVKGRVSRYVYNDVVDKVSKWLAAWKGTILNKVGQAYLVKSVTTTISVYTIQL 99
Query: 586 FKIPLSICVTMQKRMNKFWWG 606
+P +C + K F WG
Sbjct: 100 HNLPTHVCKKLDKMARSFLWG 120
>IMGA|Medtr4g033120.1 Polynucleotidyl transferase, Ribonuclease H
fold, related chr04_pseudomolecule_IMGAG_V3
8119740-8120808 H EGN_Mt090430 20090702
Length = 303
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 14/113 (12%)
Query: 830 KDFMWRALRNVLPTKERLRRRGVEVDIGCPWCGEE-EDINHAIVLCSKAKGVWRQGGYEV 888
K+ +WR R +PT+ RL +GV C C E ED +H + C +A+ VW Q +
Sbjct: 15 KNLVWRVCRGCIPTRARLLDKGVNCSSLCVMCEESYEDASHVLFDCPRARKVW-QDSLLL 73
Query: 889 GDIN---------ISFTNFFLQVLAHGDKIKSQHFLVYARYIWMARNNALWNN 932
+N F LQ L+H +++ F +W +RN LW N
Sbjct: 74 SKVNSVMWCNNTAAEFIFALLQELSHD---QAELFASVLWSLWKSRNLRLWQN 123
>IMGA|Medtr4g023500.1 hypothetical protein
chr04_pseudomolecule_IMGAG_V3 5133365-5132849 H
EGN_Mt090430 20090702
Length = 92
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 4/76 (5%)
Query: 559 NRFLSRAGKEVLIKSIAQAIPTYCMSVFKIPLSICVTMQKRMNKFWW-GKKEGGRRGIHW 617
N+ L++AG+ L+ +IP+Y M + +P SIC + K + F W G K+ RG+H
Sbjct: 19 NKLLNKAGRLALVPLELTSIPSYYMYIASLPYSICEQIDKYAHSFLWNGDKD---RGVHM 75
Query: 618 LAWERMCCSKREGGRG 633
+ W +M + GG G
Sbjct: 76 VEWYKMLRPHKFGGLG 91