Jatropha Genome Database

JcCA0025111.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0025111.10 + phase: 1 /pseudo/partial
         (412 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|AC233100_19.1 Calcium-binding EF-hand AC233100.6 72825-7091...   151   5e-37
IMGA|Medtr7g127360.1 Phospholipid/glycerol acyltransferase chr07...    81   1e-15
IMGA|Medtr7g127360.2 Phospholipid/glycerol acyltransferase chr07...    80   2e-15
IMGA|AC233100_2.1 hypothetical protein AC233100.6 10429-12457 E ...    78   8e-15

>IMGA|AC233100_19.1 Calcium-binding EF-hand AC233100.6 72825-70913 E
           EGN_Mt090430 20090702
          Length = 157

 Score =  151 bits (382), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 77/142 (54%), Positives = 99/142 (69%), Gaps = 3/142 (2%)

Query: 265 SGRVNFSDFVRVMRLRACPLSEEIFGFIDVEKSGSITFKQFLYGSVHVMKQPLFRQTCEL 324
           SGRV +  F+R +RL+ACPLSE+IF FIDVEK G ITF+QFLYGS HVMK   F QTCE 
Sbjct: 12  SGRVQYRGFLRGLRLKACPLSEKIFSFIDVEKYGKITFRQFLYGSAHVMKHLGFNQTCEA 71

Query: 325 AFSKC--SDRGDRISREQLGDMVRLAIPDLDDEEVQELFKLFDTDGDGWVGKDNFISCLR 382
           AF++C  S +G  I  ++L D ++ AIP  +++EV + F LFD D DG + KD F++CLR
Sbjct: 72  AFAECGGSVKG-YIVEDELRDYIQSAIPSWNEDEVHDFFALFDDDNDGRIYKDEFLACLR 130

Query: 383 KNPLLIALFSSCSMRKGSSEAG 404
           +NPLL ALF+     K S   G
Sbjct: 131 RNPLLTALFTPQPKHKESCGNG 152


>IMGA|Medtr7g127360.1 Phospholipid/glycerol acyltransferase
           chr07_pseudomolecule_IMGAG_V3 29847322-29853298 E
           EGN_Mt090430 20090702
          Length = 390

 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 42/137 (30%), Positives = 70/137 (51%)

Query: 94  IKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSWGHI 153
           I+     +  P ++LFPEGTTTNG  ++ F+ G F+    + PVI++YP+  F  +W  I
Sbjct: 247 IREAHQNESAPLMMLFPEGTTTNGDFLLPFKTGGFLAKAPVLPVILKYPYQRFSPAWDSI 306

Query: 154 SLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASALNVVQTFHSYG 213
           S  + +I +  QF N++EV  LPI  P     ++P  +A      +A+  N++ +     
Sbjct: 307 SGVRHVIFLLCQFVNYIEVIQLPIYYPSQQEMDDPKLYADNVRRLMATEGNLILSDIGLA 366

Query: 214 DLMLLMKASESNKEKPS 230
           +  +   A   N   PS
Sbjct: 367 EKRIYHAALNGNNSLPS 383


>IMGA|Medtr7g127360.2 Phospholipid/glycerol acyltransferase
           chr07_pseudomolecule_IMGAG_V3 29847322-29853298 E
           EGN_Mt090430 20090702
          Length = 382

 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 63/113 (55%)

Query: 94  IKRKASCDRFPRVLLFPEGTTTNGKVIISFQLGAFIPGFAIQPVIVRYPHVHFDQSWGHI 153
           I+     +  P ++LFPEGTTTNG  ++ F+ G F+    + PVI++YP+  F  +W  I
Sbjct: 247 IREAHQNESAPLMMLFPEGTTTNGDFLLPFKTGGFLAKAPVLPVILKYPYQRFSPAWDSI 306

Query: 154 SLAKLMIRMFTQFHNFMEVEYLPIVSPLDNCKENPAHFAKRASHAIASALNVV 206
           S  + +I +  QF N++EV  LPI  P     ++P  +A      +A+  N++
Sbjct: 307 SGVRHVIFLLCQFVNYIEVIQLPIYYPSQQEMDDPKLYADNVRRLMATEGNLI 359


>IMGA|AC233100_2.1 hypothetical protein AC233100.6 10429-12457 E
           EGN_Mt090430 20090702
          Length = 58

 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 38/49 (77%), Positives = 41/49 (83%)

Query: 194 RASHAIASALNVVQTFHSYGDLMLLMKASESNKEKPSSFMVEMAKVESL 242
            ASHAIASALN VQT HSYGD+ML MKA E+  E PSSFMVEMAKVES+
Sbjct: 2   NASHAIASALNTVQTGHSYGDIMLHMKAQEAKHENPSSFMVEMAKVESI 50