Jatropha Genome Database

JcCA0022221.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0022221.10 - phase: 0 /partial
         (201 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|fpc265_22.1 Helicase, C-terminal fpc265 101840-115910 E EGN...    61   4e-10
IMGA|AC233683_11.1 Peptidase S8 and S53, subtilisin, kexin, sedo...    56   1e-08

>IMGA|fpc265_22.1 Helicase, C-terminal fpc265 101840-115910 E
            EGN_Mt090430 20090702
          Length = 2089

 Score = 60.8 bits (146), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 34/86 (39%), Positives = 47/86 (54%)

Query: 107  DPLPIEIERILRDERHELRMHEDMVLHIISEREKEMREIFKKYEVLLQDAERAVHQKMED 166
            DPL IE ERI +      + HED  L + S+ EKE+ E+ +KY+V  Q+ E    Q  + 
Sbjct: 1780 DPLNIEFERIQKVIEQSSKNHEDTKLRLKSDFEKELAELRRKYDVKFQEIEVEFQQTKKT 1839

Query: 167  HRTNLQYVYLSKLLAETLMLKHQDYK 192
              TNL  VY++K+LA     K  D K
Sbjct: 1840 LDTNLNTVYVNKILANAFKSKCLDLK 1865


>IMGA|AC233683_11.1 Peptidase S8 and S53, subtilisin, kexin,
           sedolisin AC233683.2 80033-72370 E EGN_Mt090430 20090702
          Length = 1243

 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 17/134 (12%)

Query: 64  RPRSTQRIGNETRVHGPRTRTSMN-DPSFHTNYVIPDIPKLAGSDPLPIEIERILRDERH 122
           R  ST R+ N   +  P    S N  P FH              DPL  E+ER+ +    
Sbjct: 794 RNMSTHRVINNLPIQTPAQLASRNFRPYFH--------------DPLNYELERLRKLTDQ 839

Query: 123 ELRMHEDMVLHIISEREKEMREIFKKYEVLLQDAERAVHQKMEDHRTNLQYVYLSKLLAE 182
             + HEDM L +    EKE+ E+ +KY++ +++ E    +  +++ T  + VY+ K+LA+
Sbjct: 840 NRKNHEDMKLQLKCNFEKEVEELHRKYDIQMKEIEVEFQKTKKNYDTQSRTVYIHKILAD 899

Query: 183 TLMLKHQD--YKGA 194
           T    + D  + GA
Sbjct: 900 TFKKANFDPMFSGA 913