Jatropha Genome Database

JcCA0020601.30
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020601.30 - phase: 0 /partial
         (149 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g161000.1 Cytidylyltransferase chr04_pseudomolecule_I...   201   9e-53
IMGA|Medtr7g081050.1 Cytidylyltransferase chr07_pseudomolecule_I...   180   2e-46
IMGA|Medtr4g161000.2 hypothetical protein chr04_pseudomolecule_I...   157   1e-39
IMGA|Medtr7g081050.2 Cytidylyltransferase chr07_pseudomolecule_I...   109   4e-25
IMGA|Medtr4g089770.1 Cytidylyltransferase chr04_pseudomolecule_I...    73   5e-14

>IMGA|Medtr4g161000.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 41001899-40997817 E
           EGN_Mt090430 20090702
          Length = 418

 Score =  201 bits (512), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 98/129 (75%), Positives = 116/129 (89%), Gaps = 2/129 (1%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           +L+ AR+LGDFLLVGIH+D+ VSE+RG +YPIMHLHERSLSVLA RYVDEVIIGAP E++
Sbjct: 272 MLKRARELGDFLLVGIHSDETVSENRGNHYPIMHLHERSLSVLASRYVDEVIIGAPLEIT 331

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
           KDMITTFNISLVVHGT+AE +  L    DPY VPKS+GIF++LESPK+ITTTSVAQRI+A
Sbjct: 332 KDMITTFNISLVVHGTVAEKS--LPSEKDPYEVPKSIGIFRLLESPKDITTTSVAQRIMA 389

Query: 121 NHEAYMKRN 129
           NH+AY+KRN
Sbjct: 390 NHDAYVKRN 398



 Score = 63.9 bits (154), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/124 (29%), Positives = 70/124 (56%), Gaps = 9/124 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSK 61
           LR A+ LGD L+VG+ +D+ +  ++G   P++ + ER   V   ++VDEVI  AP+ +++
Sbjct: 84  LRQAKALGDELVVGLVSDEEIVANKGP--PVLSMDERLALVSGLKWVDEVITDAPYAITE 141

Query: 62  DMIT----TFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
             +      +NI  V+HG   +   LL    D YA  K  G ++ ++  + +++T +  R
Sbjct: 142 TFLNRLFHEYNIDYVIHG---DDPCLLPDGTDAYAAAKKAGRYKQIKRTEGVSSTDIVGR 198

Query: 118 IVAN 121
           I+++
Sbjct: 199 IMSS 202


>IMGA|Medtr7g081050.1 Cytidylyltransferase
           chr07_pseudomolecule_IMGAG_V3 17421819-17413564 E
           EGN_Mt090430 20090702
          Length = 419

 Score =  180 bits (457), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 97/129 (75%), Positives = 106/129 (82%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           ILR AR  GDFLLVGIHTDQ VS  RG + PIM LHERSLSVLACRYVDEVIIGAPWEVS
Sbjct: 271 ILRLARDRGDFLLVGIHTDQTVSATRGLHRPIMSLHERSLSVLACRYVDEVIIGAPWEVS 330

Query: 61  KDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVA 120
           KDMITTFNISLVVHGT AE         +PYAVP S+GIFQIL+SP +ITTT++ +RIV+
Sbjct: 331 KDMITTFNISLVVHGTTAENTDFQKEQSNPYAVPISLGIFQILDSPLDITTTTIIRRIVS 390

Query: 121 NHEAYMKRN 129
           NHEAY KRN
Sbjct: 391 NHEAYQKRN 399



 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPW---- 57
           LR AR LGD L+VG+ +D  +  ++G   P+  LHER + V A ++VDEVI  AP+    
Sbjct: 71  LRQARALGDQLIVGVVSDDEIIANKGP--PVTPLHERLIMVNAVKWVDEVIPEAPYAITE 128

Query: 58  EVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
           E  K +   +NI  ++HG   +   +L    D YA  K  G ++ ++  + +++T +  R
Sbjct: 129 EFMKKLFDEYNIDYIIHG---DDPCVLPDGTDAYAHAKKAGRYKQIKRTEGVSSTDIVGR 185

Query: 118 IV 119
           ++
Sbjct: 186 ML 187


>IMGA|Medtr4g161000.2 hypothetical protein
           chr04_pseudomolecule_IMGAG_V3 40999896-40997817 E
           EGN_Mt090430 20090702
          Length = 115

 Score =  157 bits (398), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 76/97 (78%), Positives = 87/97 (89%), Gaps = 2/97 (2%)

Query: 33  MHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYA 92
           MHLHERSLSVLA RYVDEVIIGAP E++KDMITTFNISLVVHGT+AE +  L    DPY 
Sbjct: 1   MHLHERSLSVLASRYVDEVIIGAPLEITKDMITTFNISLVVHGTVAEKS--LPSEKDPYE 58

Query: 93  VPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
           VPKS+GIF++LESPK+ITTTSVAQRI+ANH+AY+KRN
Sbjct: 59  VPKSIGIFRLLESPKDITTTSVAQRIMANHDAYVKRN 95


>IMGA|Medtr7g081050.2 Cytidylyltransferase
           chr07_pseudomolecule_IMGAG_V3 17421819-17416592 E
           EGN_Mt090430 20090702
          Length = 355

 Score =  109 bits (273), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 53/65 (81%), Positives = 56/65 (86%)

Query: 1   ILRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVS 60
           ILR AR  GDFLLVGIHTDQ VS  RG + PIM LHERSLSVLACRYVDEVIIGAPWEVS
Sbjct: 271 ILRLARDRGDFLLVGIHTDQTVSATRGLHRPIMSLHERSLSVLACRYVDEVIIGAPWEVS 330

Query: 61  KDMIT 65
           KDM++
Sbjct: 331 KDMVS 335



 Score = 64.3 bits (155), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 68/122 (55%), Gaps = 9/122 (7%)

Query: 2   LRCARQLGDFLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPW---- 57
           LR AR LGD L+VG+ +D  +  ++G   P+  LHER + V A ++VDEVI  AP+    
Sbjct: 71  LRQARALGDQLIVGVVSDDEIIANKGP--PVTPLHERLIMVNAVKWVDEVIPEAPYAITE 128

Query: 58  EVSKDMITTFNISLVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQR 117
           E  K +   +NI  ++HG   +   +L    D YA  K  G ++ ++  + +++T +  R
Sbjct: 129 EFMKKLFDEYNIDYIIHG---DDPCVLPDGTDAYAHAKKAGRYKQIKRTEGVSSTDIVGR 185

Query: 118 IV 119
           ++
Sbjct: 186 ML 187


>IMGA|Medtr4g089770.1 Cytidylyltransferase
           chr04_pseudomolecule_IMGAG_V3 18782117-18786930 F
           EGN_Mt090430 20090702
          Length = 285

 Score = 73.2 bits (178), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 68/119 (57%), Gaps = 3/119 (2%)

Query: 11  FLLVGIHTDQIVSEHRGKNYPIMHLHERSLSVLACRYVDEVIIGAPWEVSKDMITTFNIS 70
           +LLVG  +D+I  +++GK   +M+  ER  S+  C++VDEVI   PW ++++ I    I 
Sbjct: 46  YLLVGCCSDEITHKYKGK--TVMNEQERYESLRHCKWVDEVIPDVPWVINQEFIDKHKID 103

Query: 71  LVVHGTIAECNSLLAGIPDPYAVPKSMGIFQILESPKNITTTSVAQRIVANHEAYMKRN 129
            V H  +   ++  AG  D Y   K++G F+  +  + I+T+ +  RI+ ++  Y+ RN
Sbjct: 104 YVAHDALPYADTSGAG-NDVYEFVKAIGKFKETKRTEGISTSDIIMRIIKDYNQYVMRN 161