Jatropha Genome Database

JcCA0020521.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020521.10 + phase: 0 
         (339 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr7g090240.1 LETM1-like chr07_pseudomolecule_IMGAG_V3 20...   365   e-101
IMGA|Medtr4g137140.1 LETM1-like chr04_pseudomolecule_IMGAG_V3 33...   173   1e-43
IMGA|Medtr4g137120.1 Calcium-binding EF-hand chr04_pseudomolecul...   171   4e-43

>IMGA|Medtr7g090240.1 LETM1-like chr07_pseudomolecule_IMGAG_V3
           20081490-20075571 H EGN_Mt090430 20090702
          Length = 794

 Score =  365 bits (936), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 218/368 (59%), Positives = 245/368 (66%), Gaps = 34/368 (9%)

Query: 1   MIQAEGVESLSETELHQACRERGLLGLLSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 60
           +IQ EGVE+LSE EL QACR+RGLLGL SVEEMRQQL DWLDLSLNHS+PSSLLILSRAF
Sbjct: 432 LIQEEGVEALSEAELRQACRDRGLLGLRSVEEMRQQLNDWLDLSLNHSLPSSLLILSRAF 491

Query: 61  SVSGKVKPEEAVQATLSSLPDEVVDTVGVTALPSEDSVSERRRKLXXXXXXXXXXXXXXX 120
           SV+GKVKPEE VQATLSSLPDEVVDTVGVTALPSEDSVSER+RKL               
Sbjct: 492 SVTGKVKPEEVVQATLSSLPDEVVDTVGVTALPSEDSVSERKRKL----EYLEMQEELIK 547

Query: 121 XXXXXXXXXXXSVGSQKDVALEEMTLPTAREAQEQARAKTLEKHEQLCXXXXXXXXXXXX 180
                      S+G ++++A +E+  PT  + +E+ +AK LEKHEQLC            
Sbjct: 548 EEEEKQAKVTESIGGERNLATKEVA-PTTEQTREEIKAKALEKHEQLCEISQALVVLASA 606

Query: 181 XXXXXXXXXFLKLVKKEIDLYNSMVDKEGTXXXXXXXXXXXXXXXXSDQAAETAISDKVS 240
                    FL+LVKKE++LYNSMV KEG                 SD A E AISDKVS
Sbjct: 607 SSVSKEREEFLRLVKKEMELYNSMVRKEGGEGEQEAKKAYRAARKDSDGALEVAISDKVS 666

Query: 241 SALINRVDAMLQKLEKEIDDVDAKIGDRWRLLDR-------------------------- 274
           SAL+++VDAMLQ LEKEIDDVDAKIGDRWRLLD                           
Sbjct: 667 SALVDKVDAMLQTLEKEIDDVDAKIGDRWRLLDSQLQWQNPLKDTVTAGSGGGGMAFIRG 726

Query: 275 --DYDGKVTPEEVASAAMYLKDHLDKEGIQELISNLSKDREGKILVEDIVKLGSQ-MEDD 331
             DYDGKVTPEEV SAAMYLKD L KEGIQELISNLSKD +GKILVEDIVKLG+Q  ED 
Sbjct: 727 IMDYDGKVTPEEVVSAAMYLKDTLGKEGIQELISNLSKDIDGKILVEDIVKLGTQKKEDA 786

Query: 332 DTAEEGKA 339
           D  E G++
Sbjct: 787 DKDEVGRS 794


>IMGA|Medtr4g137140.1 LETM1-like chr04_pseudomolecule_IMGAG_V3
           33697938-33693878 E EGN_Mt090430 20090702
          Length = 539

 Score =  173 bits (438), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 84/105 (80%), Positives = 95/105 (90%)

Query: 1   MIQAEGVESLSETELHQACRERGLLGLLSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 60
           +IQ EGV+SLSE EL + CRERG+LGL SVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF
Sbjct: 386 LIQEEGVDSLSEAELREDCRERGMLGLRSVEEMRQQLRDWLDLSLNHSVPSSLLILSRAF 445

Query: 61  SVSGKVKPEEAVQATLSSLPDEVVDTVGVTALPSEDSVSERRRKL 105
            VSG+ KPEE +Q T+SSLPDE+VDT+ VT+LPSEDSVSER+RKL
Sbjct: 446 IVSGRSKPEEILQNTISSLPDELVDTIQVTSLPSEDSVSERKRKL 490


>IMGA|Medtr4g137120.1 Calcium-binding EF-hand
           chr04_pseudomolecule_IMGAG_V3 33691738-33689246 E
           EGN_Mt090430 20090702
          Length = 137

 Score =  171 bits (434), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 93/134 (69%), Positives = 103/134 (76%), Gaps = 1/134 (0%)

Query: 204 MVDKEGTXXXXXXXXXXXXXXXXSDQAAETAIS-DKVSSALINRVDAMLQKLEKEIDDVD 262
           MV+KEG+                 + AAE+    DKVSSALI RVDAMLQ LEKEIDDVD
Sbjct: 1   MVEKEGSDGEKDAFKAYKAAREEHEHAAESDDDRDKVSSALIERVDAMLQNLEKEIDDVD 60

Query: 263 AKIGDRWRLLDRDYDGKVTPEEVASAAMYLKDHLDKEGIQELISNLSKDREGKILVEDIV 322
           AKIGDRWRLLDRDYDGKVTPEEVASAAMYLK+ L KEG+QEL+SNLSKD++GKILVEDIV
Sbjct: 61  AKIGDRWRLLDRDYDGKVTPEEVASAAMYLKNTLGKEGVQELVSNLSKDKDGKILVEDIV 120

Query: 323 KLGSQMEDDDTAEE 336
           KLG   ED  TAE+
Sbjct: 121 KLGGWREDGHTAED 134