Jatropha Genome Database

JcCA0020001.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0020001.20 - phase: 0 
         (470 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g005850.1 Tryptophan synthase, beta chain and related...   577   e-165
IMGA|Medtr3g064270.1 Pyridoxal-5-phosphate-dependent enzyme, bet...   559   e-159
IMGA|Medtr3g068150.1 Pyridoxal-5-phosphate-dependent enzyme, bet...   526   e-150

>IMGA|Medtr5g005850.1 Tryptophan synthase, beta chain and related
           chr05_pseudomolecule_IMGAG_V3 392806-397039 E
           EGN_Mt090430 20090702
          Length = 466

 Score =  577 bits (1487), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 284/387 (73%), Positives = 333/387 (86%), Gaps = 2/387 (0%)

Query: 74  GKFGRFGGNYVPEILVACLRELETQFISALRDPLFQEELATALRDYVGRETPLYFAERLT 133
           GKFGRFGG +VPE LV C  +LE +F +AL D +FQ ELATALRDYVGRETPLY A+RL+
Sbjct: 77  GKFGRFGGKFVPETLVVCFNQLEAEFKNALHDDVFQAELATALRDYVGRETPLYHAQRLS 136

Query: 134 NHYK-KEDGKGPEIYLKREDLNHCGAHKMNNAIAQAMIAKRMGLKSVVAATGAGQHGVAT 192
            HYK K  GKGPEIYLKREDLNH G+HKMNNA+AQAMIAKR+GLKSVV ATG+G HG+AT
Sbjct: 137 EHYKSKNGGKGPEIYLKREDLNHTGSHKMNNALAQAMIAKRIGLKSVVTATGSGHHGLAT 196

Query: 193 AAACAKLSLECTVLMGTTDMEKQSSNVLLMKLLGAQVKAVNGNFKDASSEAVREWVGNLE 252
           AAACAKL+LECTV M   DM++QSSNV LMKLLGA+V+AVNG FKDASSEA R WVG+LE
Sbjct: 197 AAACAKLALECTVFMAAKDMDRQSSNVRLMKLLGAKVEAVNGCFKDASSEAFRCWVGDLE 256

Query: 253 TSYYLSGTAVGPHPCPTMVRQFQSVIGKEIRKQAMEKWGGKPDVLIACVGSGSNALGAFY 312
            SY+LSG+AVGPHPCPTMVR+FQSVIGKE RKQA EKWGGKPD+++A VG+GSNALG F+
Sbjct: 257 NSYHLSGSAVGPHPCPTMVREFQSVIGKETRKQAWEKWGGKPDIIVASVGTGSNALGMFH 316

Query: 313 EFIEDEDVRLIGVEAAGFGLDSGKHAATLAMGDVGVYHGAMSYLLQDEEGQILGPHSIGV 372
           EF+ D DVRLIGVEAAG GL+SGKH++TL  G++GVYHGA+SYLLQD +GQI+ PHSI  
Sbjct: 317 EFLSDTDVRLIGVEAAGLGLESGKHSSTLTKGEMGVYHGAISYLLQDGDGQIIEPHSIAA 376

Query: 373 GLEYPGVSPELSLLKETKRAEFYSATDKEAVEAFKRLCKLEGIIPALEASHALAFLEKLC 432
           G+EYPGV PELS LKE+ RAEF  ATD+EA++A++RLCKLEGI P+LEA+HALA L+K+ 
Sbjct: 377 GMEYPGVGPELSFLKESGRAEFCVATDEEALDAYERLCKLEGIFPSLEAAHALAILDKVV 436

Query: 433 PTLPS-GIKIIVNCSGVGDKDAATVLN 458
           PTLP+  IK++VNCSG GDKDA  V N
Sbjct: 437 PTLPNDNIKVVVNCSGRGDKDADIVFN 463


>IMGA|Medtr3g064270.1 Pyridoxal-5-phosphate-dependent enzyme, beta
           subunit chr03_pseudomolecule_IMGAG_V3 14514672-14518997
           E EGN_Mt090430 20090702
          Length = 466

 Score =  559 bits (1440), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 258/389 (66%), Positives = 314/389 (80%), Gaps = 3/389 (0%)

Query: 74  GKFGRFGGNYVPEILVACLRELETQFISALRDPLFQEELATALRDYVGRETPLYFAERLT 133
           G+FG+FGG YVPE L+  L  LE  F S   D  FQ+ELA  L+DYVGRETPLYFAERLT
Sbjct: 75  GRFGKFGGKYVPETLMHALTLLEASFHSLAGDEDFQKELAGILKDYVGRETPLYFAERLT 134

Query: 134 NHYKKEDGKGPEIYLKREDLNHCGAHKMNNAIAQAMIAKRMGLKSVVAATGAGQHGVATA 193
            HYK  +G+GP IYLKREDLNH GAHK+NNA+AQA++AK++G K ++A TGAGQHGVATA
Sbjct: 135 EHYKNANGEGPHIYLKREDLNHTGAHKINNAVAQALLAKKLGKKRIIAETGAGQHGVATA 194

Query: 194 AACAKLSLECTVLMGTTDMEKQSSNVLLMKLLGAQVKAVNG---NFKDASSEAVREWVGN 250
             CA+  LEC + MG  DME+Q+ NV  M+LLGA+V+ V+      KDA+SEA+R+WV N
Sbjct: 195 TVCARFGLECIIYMGAQDMERQALNVFRMRLLGAEVRPVHAGTATLKDATSEAIRDWVTN 254

Query: 251 LETSYYLSGTAVGPHPCPTMVRQFQSVIGKEIRKQAMEKWGGKPDVLIACVGSGSNALGA 310
           +ET++Y+ G+  GPHP P MVR+F +VIGKE RKQA+EKWGGKPD+LIACVG GSNA+G 
Sbjct: 255 VETTHYILGSVAGPHPYPMMVREFHAVIGKETRKQALEKWGGKPDILIACVGGGSNAMGL 314

Query: 311 FYEFIEDEDVRLIGVEAAGFGLDSGKHAATLAMGDVGVYHGAMSYLLQDEEGQILGPHSI 370
           F+EF++D DVRLIGVEAAGFGL+SGKHAATL  G+VGV HGAMSYLLQD++GQI+ PHSI
Sbjct: 315 FHEFVDDSDVRLIGVEAAGFGLNSGKHAATLTKGEVGVLHGAMSYLLQDDDGQIVEPHSI 374

Query: 371 GVGLEYPGVSPELSLLKETKRAEFYSATDKEAVEAFKRLCKLEGIIPALEASHALAFLEK 430
             GL+YPGV PE S LK+  RAE++S TD EA+EAFKR+ +LEGIIPALE SHALA+LEK
Sbjct: 375 SAGLDYPGVGPEHSFLKDLGRAEYHSITDDEALEAFKRVSRLEGIIPALETSHALAYLEK 434

Query: 431 LCPTLPSGIKIIVNCSGVGDKDAATVLNY 459
           +CPTLP+G K++VN SG GDKD  TV  Y
Sbjct: 435 ICPTLPNGTKVVVNFSGRGDKDVQTVTKY 463


>IMGA|Medtr3g068150.1 Pyridoxal-5-phosphate-dependent enzyme, beta
           subunit chr03_pseudomolecule_IMGAG_V3 15809584-15813010
           E EGN_Mt090430 20090702
          Length = 370

 Score =  526 bits (1355), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 240/353 (67%), Positives = 296/353 (83%), Gaps = 3/353 (0%)

Query: 110 EELATALRDYVGRETPLYFAERLTNHYKKEDGKGPEIYLKREDLNHCGAHKMNNAIAQAM 169
           +ELA  L+DYVGRE+PLYFAERLT HYK+ +G+GP +YLKREDLNH GAHK+NNA+AQA+
Sbjct: 15  KELAGVLKDYVGRESPLYFAERLTEHYKRGNGEGPHVYLKREDLNHTGAHKINNAVAQAL 74

Query: 170 IAKRMGLKSVVAATGAGQHGVATAAACAKLSLECTVLMGTTDMEKQSSNVLLMKLLGAQV 229
           +AK++G K V+A TGAGQHGVATA  CA+  LEC V MG  DME+Q+ NV  M+LLGA+V
Sbjct: 75  LAKKLGKKRVIAETGAGQHGVATATVCARFGLECVVYMGALDMERQALNVFRMRLLGAEV 134

Query: 230 KAVNG---NFKDASSEAVREWVGNLETSYYLSGTAVGPHPCPTMVRQFQSVIGKEIRKQA 286
           +AV+      KDA+SEA+R+WV N+ET++Y+ G+  GPHP P MVR+F +VIGKE RKQA
Sbjct: 135 RAVHAGTATLKDATSEAIRDWVTNVETTHYILGSVCGPHPYPMMVREFHAVIGKETRKQA 194

Query: 287 MEKWGGKPDVLIACVGSGSNALGAFYEFIEDEDVRLIGVEAAGFGLDSGKHAATLAMGDV 346
           +EKWGGKPD+L+ACVG GSNA+G F+EFI+D+DVRLIGVEA+G GL+SGKHAATL  G+V
Sbjct: 195 LEKWGGKPDILVACVGGGSNAIGLFHEFIDDKDVRLIGVEASGLGLESGKHAATLTKGEV 254

Query: 347 GVYHGAMSYLLQDEEGQILGPHSIGVGLEYPGVSPELSLLKETKRAEFYSATDKEAVEAF 406
           GV HGAMSYLLQD++GQI+ PHSI  GL+YPGV PE S LK+  RAE+YS TD+EA+EAF
Sbjct: 255 GVLHGAMSYLLQDDDGQIIEPHSISAGLDYPGVGPEHSFLKDAGRAEYYSVTDEEALEAF 314

Query: 407 KRLCKLEGIIPALEASHALAFLEKLCPTLPSGIKIIVNCSGVGDKDAATVLNY 459
           KR+ +LEGIIPALE SHALA+LEKLCPTLP+G K++VNCSG GDKD  T + Y
Sbjct: 315 KRVSQLEGIIPALETSHALAYLEKLCPTLPNGTKVVVNCSGRGDKDVQTAMKY 367