Jatropha Genome Database

JcCA0015901.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0015901.10 + phase: 2 /partial
         (586 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g086040.1 Protein of unknown function DUF593 chr05_ps...    98   1e-20
IMGA|AC233677_15.1 Protein of unknown function DUF593 AC233677.2...    90   3e-18

>IMGA|Medtr5g086040.1 Protein of unknown function DUF593
           chr05_pseudomolecule_IMGAG_V3 32959672-32963368 E
           EGN_Mt090430 20090702
          Length = 986

 Score = 97.8 bits (242), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/121 (47%), Positives = 76/121 (62%), Gaps = 6/121 (4%)

Query: 299 SAIGMQILQKRISL-ERNESGL--SLDGSIVSEIEGE---TVVDRLNRQIEHDKKLLIAL 352
           SA  M  +Q+++ L E+ ESG   S+DGS+ SE+E       +DRL   ++ +++ L A+
Sbjct: 575 SADAMHYMQRKLILFEKTESGAEESVDGSVASEVEYSDPVLTIDRLKTSLKAEQRALSAI 634

Query: 353 YKELEEERXXXXXXXXXXXXXXTRLQEEKATLQMEALQCLRMMEEQAEYDMETLQKTNDL 412
           Y+ELEEER              TRLQEEKA +QMEALQ  RMMEEQAEYD E LQ  NDL
Sbjct: 635 YQELEEERSASAIATNQTMAMITRLQEEKAAMQMEALQYQRMMEEQAEYDQEALQLLNDL 694

Query: 413 L 413
           +
Sbjct: 695 M 695


>IMGA|AC233677_15.1 Protein of unknown function DUF593 AC233677.2
           93257-91501 E EGN_Mt090430 20090702
          Length = 505

 Score = 89.7 bits (221), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/128 (47%), Positives = 82/128 (64%), Gaps = 2/128 (1%)

Query: 308 KRISLERNESGL-SLDGSIVSEIEGETVVDRLNRQIEHDKKLLIALYKELEEERXXXXXX 366
           K+  LE+ ES   S +G+   E E + V++ L RQ+  D+K L+ALY EL+EER      
Sbjct: 302 KKSPLEKMESTSDSTEGNCQDE-EVDAVLNNLKRQVRLDRKSLMALYMELDEERSASAVA 360

Query: 367 XXXXXXXXTRLQEEKATLQMEALQCLRMMEEQAEYDMETLQKTNDLLAEREKEIQDLEAD 426
                   TRLQEEKATL M+  Q  RMMEEQ EYD E LQ+TN+LL + E+E++ L+A+
Sbjct: 361 ANNAMAMITRLQEEKATLHMDTSQYQRMMEEQIEYDEEVLQETNELLLKLEEEVKTLDAE 420

Query: 427 LEFYRNNY 434
           LE YR+ Y
Sbjct: 421 LEIYRDKY 428