Jatropha Genome Database

JcCA0015401.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0015401.20 - phase: 0 /partial
         (258 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr2g121640.1 WD40-like chr02_pseudomolecule_IMGAG_V3 289...   240   6e-64
IMGA|Medtr1g059920.1 Serine/threonine protein phosphatase 2A 55 ...   209   1e-54
IMGA|AC235757_45.1 Tyrosine protein kinase, active site; WD40-li...   145   2e-35
IMGA|AC235757_42.3 WD40-like; AC235757.1 143728-153003 E EGN_Mt0...   104   5e-23
IMGA|AC235757_42.2 WD40-like; AC235757.1 143728-153003 E EGN_Mt0...   104   5e-23
IMGA|AC235757_42.1 WD40-like; AC235757.1 143728-153003 E EGN_Mt0...   104   5e-23

>IMGA|Medtr2g121640.1 WD40-like chr02_pseudomolecule_IMGAG_V3
           28903505-28910946 E EGN_Mt090430 20090702
          Length = 520

 Score =  240 bits (612), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 113/184 (61%), Positives = 142/184 (77%), Gaps = 7/184 (3%)

Query: 75  KIAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLEISNQCFNII 134
           K++  E +  A CR+VYAHAHD+         DGETFISADDLRINLWNLEIS+Q FNI+
Sbjct: 219 KVSSHETSLVARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLEISSQSFNIV 278

Query: 135 DMKPANMEDLTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSAMILQDADCH 194
           D+KPANMEDLTEVITSAEFHP +CN LAYSSS+G IRL+D+RQSALCD  A + ++ +  
Sbjct: 279 DVKPANMEDLTEVITSAEFHPTHCNTLAYSSSKGSIRLIDLRQSALCDSHAKLFEEQEAP 338

Query: 195 EPKSFFTEIIASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKIHEH 254
             +SFFTEIIASISD+KF  DG++ILSRDY+ LK       LWD+  ++ PVA +++HE+
Sbjct: 339 GSRSFFTEIIASISDIKFGKDGRYILSRDYMTLK-------LWDINMDSGPVATYQVHEY 391

Query: 255 LQPK 258
           L+PK
Sbjct: 392 LRPK 395


>IMGA|Medtr1g059920.1 Serine/threonine protein phosphatase 2A 55 kDa
           regulatory subunit Bbeta isoform, putative
           chr01_pseudomolecule_IMGAG_V3 11800230-11798728 E
           EGN_Mt090430 20090702
          Length = 471

 Score =  209 bits (531), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 111/216 (51%), Positives = 142/216 (65%), Gaps = 17/216 (7%)

Query: 44  ELQKPSTVNGRHLEWTGDIVKNISPFQEGHTKIAHAEDTTRASCRKVYAHAHDFXXXXXX 103
           +++K + +N  H +  G I     P    H      E +  A CR+VYA AHD+      
Sbjct: 133 KVKKIAEMNVDHYKSIGGIPSLRLPVVSSH------ETSLVAQCRRVYARAHDYHINSIS 186

Query: 104 XXXDGETFISADDLRINLWNLEISNQCFNIIDMKPANM-EDLTEVITSAEFHPIYCNMLA 162
              DGETFISAD LRINLWNLEIS   FNI+D+KPANM +DLTEVITSAEFHP +CN LA
Sbjct: 187 NNSDGETFISADALRINLWNLEISKPSFNIVDVKPANMDDDLTEVITSAEFHPTHCNTLA 246

Query: 163 YSSSRGFIRLVDMRQSALCDQSAMILQDADCHEPKSFFTEIIASISDMKFTNDGQHILSR 222
           YSSS+G IRL+D+RQSALCD  A + +        S F EIIASISD+KF  DG++ILSR
Sbjct: 247 YSSSKGSIRLIDLRQSALCDSHAKLFE---APRSSSLFKEIIASISDIKFGKDGRYILSR 303

Query: 223 DYLNLKVFDLNYTLWDMRKNALPVAIFKIHEHLQPK 258
           DY+ LK       LWD+  ++ PVA +++H++L+ K
Sbjct: 304 DYMTLK-------LWDINMDSGPVATYQVHKYLKSK 332


>IMGA|AC235757_45.1 Tyrosine protein kinase, active site; WD40-like
           AC235757.1 178369-171369 E EGN_Mt090430 20090702
          Length = 818

 Score =  145 bits (367), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 67/115 (58%), Positives = 88/115 (76%), Gaps = 7/115 (6%)

Query: 144 LTEVITSAEFHPIYCNMLAYSSSRGFIRLVDMRQSALCDQSAMILQDADCHEPKSFFTEI 203
           + EVITSAEFHP +CN LAYSSS+G IRLVD+RQSALCD  A + ++ +    +SFFTEI
Sbjct: 586 IAEVITSAEFHPTHCNTLAYSSSKGSIRLVDLRQSALCDSHAKLFEEQEAPGSRSFFTEI 645

Query: 204 IASISDMKFTNDGQHILSRDYLNLKVFDLNYTLWDMRKNALPVAIFKIHEHLQPK 258
           IASISD+KF  DG++ILSRDY+ LK       LWD+  ++ PVA +++HEHL+P+
Sbjct: 646 IASISDIKFAKDGRYILSRDYMTLK-------LWDINMDSGPVATYRVHEHLRPR 693


>IMGA|AC235757_42.3 WD40-like; AC235757.1 143728-153003 E
           EGN_Mt090430 20090702
          Length = 689

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 81/140 (57%), Gaps = 7/140 (5%)

Query: 12  VKEHKCKKVKETDADSVVYSESALLAEKSFSSELQKPSTVNGRHLEWTGDIVKNISPFQE 71
           V+E K KK+ + + DS   + +  +A  S +S   KP   NG   + +   + N   F  
Sbjct: 146 VQEKKVKKISDMNIDSSKATGNGSIASSS-NSSSSKPHLANGGPSDKSYSYLSNDFSFPP 204

Query: 72  GH------TKIAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLE 125
           G         +   E +  A CR+VYAHAHD+         DGETFISADDLRINLWNLE
Sbjct: 205 GGLPSLKLPSVVSHETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLE 264

Query: 126 ISNQCFNIIDMKPANMEDLT 145
           IS+Q FNI+D+KPANMEDLT
Sbjct: 265 ISSQSFNIVDVKPANMEDLT 284


>IMGA|AC235757_42.2 WD40-like; AC235757.1 143728-153003 E
           EGN_Mt090430 20090702
          Length = 688

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/140 (45%), Positives = 81/140 (57%), Gaps = 7/140 (5%)

Query: 12  VKEHKCKKVKETDADSVVYSESALLAEKSFSSELQKPSTVNGRHLEWTGDIVKNISPFQE 71
           V+E K KK+ + + DS   + +  +A  S +S   KP   NG   + +   + N   F  
Sbjct: 145 VQEKKVKKISDMNIDSSKATGNGSIASSS-NSSSSKPHLANGGPSDKSYSYLSNDFSFPP 203

Query: 72  GH------TKIAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNLE 125
           G         +   E +  A CR+VYAHAHD+         DGETFISADDLRINLWNLE
Sbjct: 204 GGLPSLKLPSVVSHETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNLE 263

Query: 126 ISNQCFNIIDMKPANMEDLT 145
           IS+Q FNI+D+KPANMEDLT
Sbjct: 264 ISSQSFNIVDVKPANMEDLT 283


>IMGA|AC235757_42.1 WD40-like; AC235757.1 143728-153003 E
           EGN_Mt090430 20090702
          Length = 690

 Score =  104 bits (259), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/141 (44%), Positives = 82/141 (58%), Gaps = 8/141 (5%)

Query: 12  VKEHKCKKVKETDADSVVYSESALLAEKSFSSELQKPSTVNGRHLEWTGDIVKNISPFQE 71
           V+E K KK+ + + DS   + +  +A  S +S   KP   NG   + +   + N   F  
Sbjct: 146 VQEKKVKKISDMNIDSSKATGNGSIASSS-NSSSSKPHLANGGPSDKSYSYLSNDFSFPP 204

Query: 72  GH-------TKIAHAEDTTRASCRKVYAHAHDFXXXXXXXXXDGETFISADDLRINLWNL 124
           G        + +   E +  A CR+VYAHAHD+         DGETFISADDLRINLWNL
Sbjct: 205 GGLPSLKLPSVVVSHETSLLARCRRVYAHAHDYHINSISNNSDGETFISADDLRINLWNL 264

Query: 125 EISNQCFNIIDMKPANMEDLT 145
           EIS+Q FNI+D+KPANMEDLT
Sbjct: 265 EISSQSFNIVDVKPANMEDLT 285