Jatropha Genome Database

JcCA0011592.10
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0011592.10 - phase: 0 
         (234 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr4g129820.1 Glycosyl transferase, family 10 chr04_pseud...    72   3e-13

>IMGA|Medtr4g129820.1 Glycosyl transferase, family 10
           chr04_pseudomolecule_IMGAG_V3 31004394-30999423 E
           EGN_Mt090430 20090702
          Length = 528

 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 1/109 (0%)

Query: 116 AMSHYKFVLAIENTVTESYVTEKLFYALDSGAVPIYFGAPNVDDFVP-PHSIIDGTKFIS 174
            ++ YKF LA EN+  E YVTEK F +L +G +P+  G PN+ DF P P S +   +   
Sbjct: 286 TLTRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGPPNIQDFAPSPGSFLYIKELED 345

Query: 175 MEELASYIKKLANDPVAYAEYHAWRRCGVLGNYGKTRLASLDTLPCRLC 223
           +E +A  ++ LA +P AY +   W+  G   ++      +     CRLC
Sbjct: 346 VESVAKSMRYLAENPEAYNQSLRWKYEGPSDSFKALVDMAAVHSSCRLC 394