Jatropha Genome Database

JcCA0009632.20
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0009632.20 - phase: 0 /pseudo/partial
         (245 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr1g100620.1 ELK; Homeodomain-related chr01_pseudomolecu...   165   2e-41
IMGA|Medtr5g035050.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...   124   6e-29
IMGA|Medtr5g093180.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...   124   6e-29
IMGA|Medtr5g011210.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    80   7e-16
IMGA|Medtr3g137900.2 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    78   5e-15
IMGA|Medtr3g137900.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    78   5e-15
IMGA|Medtr8g122670.1 ELK; KNOX1; KNOX2; Homeodomain-related chr0...    74   5e-14
IMGA|Medtr1g028710.1 POX; Homeodomain-related chr01_pseudomolecu...    58   5e-09
IMGA|Medtr7g070800.1 POX; Homeodomain-related chr07_pseudomolecu...    56   1e-08
IMGA|fpc265_20.1 POX; Homeodomain-related fpc265 87448-90403 H E...    55   3e-08
IMGA|Medtr5g018810.1 POX; Homeodomain-related chr05_pseudomolecu...    54   9e-08
IMGA|Medtr1g020740.1 POX; Homeodomain-related chr01_pseudomolecu...    53   2e-07
IMGA|Medtr1g020640.1 POX; Homeodomain-related chr01_pseudomolecu...    53   2e-07

>IMGA|Medtr1g100620.1 ELK; Homeodomain-related
           chr01_pseudomolecule_IMGAG_V3 20954185-20951220 E
           EGN_Mt090430 20090702
          Length = 150

 Score =  165 bits (417), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 84/150 (56%), Positives = 103/150 (68%), Gaps = 5/150 (3%)

Query: 87  FFSLKRFLADEAAGTSEEELSCGEIEASES--QESSGGR-PNDQDVKGMLMRKYSGYLSN 143
           + S    +  EAAGTSE+E+SCG++EA E    E  G   P D+++K ML+RKY GYLSN
Sbjct: 2   YISSTNLVDHEAAGTSEDEMSCGKVEAVEGGHDELCGTSCPGDKELKEMLLRKYGGYLSN 61

Query: 144 XXXXXXXXXXXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFIN 203
                                L+DWWN HYRWPYPTE+EK++LS++TGLD KQINNWFIN
Sbjct: 62  LRQEFLKKRKKGKLPKDARKALMDWWNVHYRWPYPTEEEKLQLSDMTGLDIKQINNWFIN 121

Query: 204 QRKRHWKPSEDMRFALMEGVSVSSSMIGGP 233
           QRKRHWKPSEDMRF++MEG  VSS+ I GP
Sbjct: 122 QRKRHWKPSEDMRFSIMEG--VSSTGIAGP 149


>IMGA|Medtr5g035050.1 ELK; KNOX1; KNOX2; Homeodomain-related
           chr05_pseudomolecule_IMGAG_V3 14425093-14433603 E
           EGN_Mt090430 20090702
          Length = 316

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 82/130 (63%), Gaps = 4/130 (3%)

Query: 95  ADEAAGTSEEELSCGEIEASESQESSGGRPNDQDVKGMLMRKYSGYLSNXXXXXXXXXXX 154
           +D+   +S+E+LS G+ +  + Q     R  D+++K  L+RK+  ++             
Sbjct: 184 SDDGGASSDEDLSTGDGDVQDGQ----SRGEDRELKDRLLRKFGSHIGTLKLEFSKKKKK 239

Query: 155 XXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSED 214
                     LL WWN HY+WPYPTE +K++L++ TGLDQKQINNWFINQRKRHWKPSE+
Sbjct: 240 GKLPKEARQTLLQWWNVHYKWPYPTEADKIELAKSTGLDQKQINNWFINQRKRHWKPSEN 299

Query: 215 MRFALMEGVS 224
           M+F++ME  +
Sbjct: 300 MQFSMMENFT 309


>IMGA|Medtr5g093180.1 ELK; KNOX1; KNOX2; Homeodomain-related
           chr05_pseudomolecule_IMGAG_V3 36623468-36619750 F
           EGN_Mt090430 20090702
          Length = 312

 Score =  124 bits (310), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/136 (47%), Positives = 82/136 (60%), Gaps = 3/136 (2%)

Query: 90  LKRFLADEAAGTSEEELSCGEIEASESQ-ESSGGRPNDQDVKGMLMRKYSGYLSNXXXXX 148
           LK        G SE   S  EI+  E+  +++ G   DQ++K  L+RKYSGYL +     
Sbjct: 159 LKAVAVSTDFGQSEFAASQNEIDVHENNLDTTQGE--DQELKVQLLRKYSGYLGSLKKEF 216

Query: 149 XXXXXXXXXXXXXXTILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRH 208
                           LLDWW+ HY+WPYP+E +K  L+E TGLD KQINNWFINQRKRH
Sbjct: 217 LKKKKNGKLPKEARQQLLDWWSRHYKWPYPSESQKQALAESTGLDLKQINNWFINQRKRH 276

Query: 209 WKPSEDMRFALMEGVS 224
           WKPSEDM+FA+M+  +
Sbjct: 277 WKPSEDMQFAVMDATN 292


>IMGA|Medtr5g011210.1 ELK; KNOX1; KNOX2; Homeodomain-related
           chr05_pseudomolecule_IMGAG_V3 3000765-2996172 E
           EGN_Mt090430 20090702
          Length = 305

 Score = 80.5 bits (197), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 32/47 (68%), Positives = 38/47 (80%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHW 209
           ++L +WW  H +WPYPTED+K KL E TGL  KQINNWFINQRKR+W
Sbjct: 230 SVLKNWWQQHAKWPYPTEDDKAKLVEETGLQLKQINNWFINQRKRNW 276


>IMGA|Medtr3g137900.2 ELK; KNOX1; KNOX2; Homeodomain-related
           chr03_pseudomolecule_IMGAG_V3 35070779-35066452 E
           EGN_Mt090430 20090702
          Length = 371

 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 42/57 (73%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSEDMRFAL 219
           ++L DWW +H +WPYPTE++K +L + TGL  KQINNWFINQRKR+W  +     AL
Sbjct: 309 SVLKDWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSNAL 365


>IMGA|Medtr3g137900.1 ELK; KNOX1; KNOX2; Homeodomain-related
           chr03_pseudomolecule_IMGAG_V3 35070779-35066452 E
           EGN_Mt090430 20090702
          Length = 373

 Score = 77.8 bits (190), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 32/57 (56%), Positives = 42/57 (73%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSEDMRFAL 219
           ++L DWW +H +WPYPTE++K +L + TGL  KQINNWFINQRKR+W  +     AL
Sbjct: 309 SVLKDWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNWHSNPSTSNAL 365


>IMGA|Medtr8g122670.1 ELK; KNOX1; KNOX2; Homeodomain-related
           chr08_pseudomolecule_IMGAG_V3 28787058-28781546 E
           EGN_Mt090430 20090702
          Length = 332

 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 29/47 (61%), Positives = 38/47 (80%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHW 209
           ++L  WW +H +WPYPTE++K +L + TGL  KQINNWFINQRKR+W
Sbjct: 269 SLLKAWWQSHSKWPYPTEEDKARLVQETGLQLKQINNWFINQRKRNW 315


>IMGA|Medtr1g028710.1 POX; Homeodomain-related
           chr01_pseudomolecule_IMGAG_V3 7082004-7085625 E
           EGN_Mt090430 20090702
          Length = 627

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           +IL  W   H+  PYP + EK+ L+  TGL + Q+ NWFIN R R WKP
Sbjct: 369 SILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKP 417


>IMGA|Medtr7g070800.1 POX; Homeodomain-related
           chr07_pseudomolecule_IMGAG_V3 14411920-14409514 E
           EGN_Mt090430 20090702
          Length = 320

 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 34/49 (69%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           ++L  W   H+  PYP++ +K+ L++ TGL + Q++NWFIN R R WKP
Sbjct: 122 SVLRGWLFEHFLHPYPSDTDKLMLAKQTGLSRNQVSNWFINARVRLWKP 170


>IMGA|fpc265_20.1 POX; Homeodomain-related fpc265 87448-90403 H
           EGN_Mt090430 20090702
          Length = 616

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 24/49 (48%), Positives = 31/49 (63%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
            IL  W   H+  PYPT+ +K  L+  TGL + Q++NWFIN R R WKP
Sbjct: 452 AILRAWLFEHFLHPYPTDTDKHLLATQTGLSRNQVSNWFINARVRVWKP 500


>IMGA|Medtr5g018810.1 POX; Homeodomain-related
           chr05_pseudomolecule_IMGAG_V3 6929839-6920843 E
           EGN_Mt090430 20090702
          Length = 742

 Score = 53.5 bits (127), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/48 (45%), Positives = 31/48 (64%)

Query: 164 ILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKP 211
           +L  W   H+  PYP++ +K  L+  TGL + Q++NWFIN R R WKP
Sbjct: 529 VLRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKP 576


>IMGA|Medtr1g020740.1 POX; Homeodomain-related
           chr01_pseudomolecule_IMGAG_V3 4644571-4647334 E
           EGN_Mt090430 20090702
          Length = 524

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSEDMRFALM 220
           ++L DW   ++  PYP + EK  L+  +GL + Q++NWFIN R R WKP  +  +A M
Sbjct: 437 SVLRDWMFQNFLHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVRLWKPLIEEMYAEM 494


>IMGA|Medtr1g020640.1 POX; Homeodomain-related
           chr01_pseudomolecule_IMGAG_V3 4566352-4570572 E
           EGN_Mt090430 20090702
          Length = 524

 Score = 52.8 bits (125), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%)

Query: 163 TILLDWWNNHYRWPYPTEDEKVKLSEITGLDQKQINNWFINQRKRHWKPSEDMRFALM 220
           ++L DW   ++  PYP + EK  L+  +GL + Q++NWFIN R R WKP  +  +A M
Sbjct: 437 SVLRDWMFQNFLHPYPKDAEKHLLAIKSGLTRSQVSNWFINARVRLWKPLIEEMYAEM 494