Jatropha Genome Database
- JcCA0009542.10
BLASTP 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= JcCA0009542.10 - phase: 2 /pseudo/partial
(623 letters)
Database: Medicago_aa3.0
53,423 sequences; 12,992,982 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
IMGA|Medtr1g132560.1 Copper amine oxidase; ; ; ; chr01_pseudomol... 553 e-157
IMGA|Medtr1g132530.1 Copper amine oxidase; ; ; chr01_pseudomolec... 467 e-132
IMGA|Medtr3g109760.1 Copper amine oxidase; ; ; chr03_pseudomolec... 433 e-121
IMGA|AC229702_7.1 Copper amine oxidase; ; ; AC229702.6 83591-790... 424 e-119
IMGA|Medtr3g114690.1 Copper amine oxidase; ; ; chr03_pseudomolec... 177 1e-44
IMGA|Medtr5g034500.1 Copper amine oxidase; ; ; chr05_pseudomolec... 151 7e-37
>IMGA|Medtr1g132560.1 Copper amine oxidase; ; ; ;
chr01_pseudomolecule_IMGAG_V3 29615628-29612795 E
EGN_Mt090430 20090702
Length = 673
Score = 553 bits (1424), Expect = e-157, Method: Compositional matrix adjust.
Identities = 250/384 (65%), Positives = 305/384 (79%), Gaps = 2/384 (0%)
Query: 239 KHRSVLYRGHISELFVPYQDPTEEYYFKTFFDCGEFGFGQSSVSLVPLADCPNNAVFMDG 298
K+R VLY+G ISE+FVPYQDP+EE+Y+ T+FDCGE+GFGQ+ SL P DCP NAVF+D
Sbjct: 292 KYREVLYKGLISEVFVPYQDPSEEWYYTTYFDCGEYGFGQTMSSLQPFTDCPANAVFLDA 351
Query: 299 YYAGQDGKPVKVPNVFCIFERHSGDIMWRHTELGIPGEVIIESSPEVSLVVRMVAAIGNY 358
YY+ DG PVK+ N FCIFE+++GDIMWRHTE+ IP EVI E +VSLVVR V+ +GNY
Sbjct: 352 YYSASDGTPVKISNAFCIFEKYAGDIMWRHTEIAIPNEVITEVRSDVSLVVRSVSTVGNY 411
Query: 359 DHTLDWELKPSGSIHVKVGLSGILEVKATAYTHSDEVKEEIYGTFLGENMIGLYHDHFFT 418
D+ +DWE KPSGSI + VGL+GIL +KA YT++D++KE+I+GT L +N IG+YHDHFFT
Sbjct: 412 DYVIDWEFKPSGSIKLGVGLTGILGIKAGTYTNTDQIKEDIHGTLLADNTIGIYHDHFFT 471
Query: 419 YRLDLDIDGVENSLIKKNLVTKTVMENSTPRKSYWTVVSETAKTESEAKIQLGMEPAELV 478
Y LDLDIDG NS +K NL T V + + PRKSYWTVV ETA+TE++A++ +G++P+EL+
Sbjct: 472 YYLDLDIDGEANSFVKTNLETVRVKDQTIPRKSYWTVVKETARTEADARVNIGIKPSELL 531
Query: 479 IVNPNKKTKPGNSHGYRLIPDHAAHPLLLEDDYPQVRGAFTKYNVWVTAYNKSEKWAGGK 538
+VNP+KKTK GN GYRL+P HPLLL DDYPQ+RGAFT YNVWVT YNK+EKWAGG
Sbjct: 532 VVNPSKKTKQGNQIGYRLLPGPIVHPLLLTDDYPQIRGAFTNYNVWVTPYNKTEKWAGGL 591
Query: 539 YVDQSHGEDTLAVWSSMNREIENKDIVLWCVLGIHHLPCQEDLPVMPTLSSGFELRPTNF 598
YVD S G+DTLAVWS R IENKDIVLW +G HH+P QED PVMPTLS GFELRPTNF
Sbjct: 592 YVDHSRGDDTLAVWSL--RRIENKDIVLWHTMGFHHVPSQEDFPVMPTLSGGFELRPTNF 649
Query: 599 FERSLVLKVIPPKPVTSPNCSANH 622
FE + VLK PK V PNC+ H
Sbjct: 650 FESNPVLKTKSPKAVHWPNCTFQH 673
>IMGA|Medtr1g132530.1 Copper amine oxidase; ; ;
chr01_pseudomolecule_IMGAG_V3 29599410-29602682 H
EGN_Mt090430 20090702
Length = 658
Score = 467 bits (1202), Expect = e-132, Method: Compositional matrix adjust.
Identities = 215/369 (58%), Positives = 265/369 (71%)
Query: 237 KGKHRSVLYRGHISELFVPYQDPTEEYYFKTFFDCGEFGFGQSSVSLVPLADCPNNAVFM 296
K K+R V+YRGH+SE FVPY DPT E+YF+TF D GEFGFG+S+ SL P DCP NAV+M
Sbjct: 290 KQKYRRVMYRGHVSETFVPYMDPTLEWYFRTFMDVGEFGFGRSADSLQPKVDCPGNAVYM 349
Query: 297 DGYYAGQDGKPVKVPNVFCIFERHSGDIMWRHTELGIPGEVIIESSPEVSLVVRMVAAIG 356
DG+ G +G+ +VP C+FER+SG++ WRH E+ P ++I + +++LVVRM+A +G
Sbjct: 350 DGFMVGPNGEVQQVPRAICMFERNSGNVAWRHMEINNPTKLIRDGEADITLVVRMIATVG 409
Query: 357 NYDHTLDWELKPSGSIHVKVGLSGILEVKATAYTHSDEVKEEIYGTFLGENMIGLYHDHF 416
NYD+ LDWE SGSI V V L+G+LE+KA YTH +++KE ++GT + EN I YHDH
Sbjct: 410 NYDYILDWEFLKSGSIKVGVALTGVLEMKAVPYTHKNQIKERVFGTLVAENTIANYHDHL 469
Query: 417 FTYRLDLDIDGVENSLIKKNLVTKTVMENSTPRKSYWTVVSETAKTESEAKIQLGMEPAE 476
TY LDLDID NS I L TPRKSYWTV E K E+EA+I LG+EP E
Sbjct: 470 VTYYLDLDIDDNANSFINAKLQKVKASGFGTPRKSYWTVNKEAVKREAEARITLGLEPNE 529
Query: 477 LVIVNPNKKTKPGNSHGYRLIPDHAAHPLLLEDDYPQVRGAFTKYNVWVTAYNKSEKWAG 536
L+IVNPNK TK GN GYRLI LL +DDYPQ R ++TKY VWVT YNKSE+WAG
Sbjct: 530 LLIVNPNKMTKLGNQVGYRLISGQPVSSLLDDDDYPQRRASYTKYQVWVTPYNKSERWAG 589
Query: 537 GKYVDQSHGEDTLAVWSSMNREIENKDIVLWCVLGIHHLPCQEDLPVMPTLSSGFELRPT 596
G Y D+S G+D LAVWS NREIEN DIVLW +GIHH+P QED PVMPT+ GFELRP
Sbjct: 590 GFYADRSRGDDGLAVWSQRNREIENTDIVLWHTVGIHHVPYQEDFPVMPTVQGGFELRPA 649
Query: 597 NFFERSLVL 605
NFFE + +L
Sbjct: 650 NFFESNPLL 658
>IMGA|Medtr3g109760.1 Copper amine oxidase; ; ;
chr03_pseudomolecule_IMGAG_V3 27564255-27560584 E
EGN_Mt090430 20090702
Length = 731
Score = 433 bits (1114), Expect = e-121, Method: Compositional matrix adjust.
Identities = 208/401 (51%), Positives = 271/401 (67%), Gaps = 3/401 (0%)
Query: 226 LASRLMVILSDKGKHRSVLYRGHISELFVPYQDPTEEYYFKTFFDCGEFGFGQSSVSLVP 285
+ S+ V D + R+V+Y+G SELFVPY DPT+ +YFKT+ D GE+GFG ++ L P
Sbjct: 330 IISQAKVRDPDTLEMRNVIYKGFTSELFVPYMDPTDGWYFKTYMDAGEYGFGLQAMPLDP 389
Query: 286 LADCPNNAVFMDGYYAGQDGKPVKVPNVFCIFERHSGDIMWRHTELGIPGEVIIESSPEV 345
L DCP NA +MDG + DG P PN+ CIFE ++GDI WRH E I + E P+V
Sbjct: 390 LNDCPRNAYYMDGVFTSADGTPYVQPNMICIFESYAGDIAWRHAECPITDIKVTEVRPKV 449
Query: 346 SLVVRMVAAIGNYDHTLDWELKPSGSIHVKVGLSGILEVKATAYTHSDEV--KEEIYGTF 403
+LVVRM AA+ NYD+ +DWE + G I KVGLSGIL VK T Y H ++V +E +YGT
Sbjct: 450 TLVVRMAAAVANYDYIMDWEFQTDGLIRSKVGLSGILMVKGTTYDHMNQVPDQEYLYGTL 509
Query: 404 LGENMIGLYHDHFFTYRLDLDIDGVENSLIKKNLVTKTVMENSTPRKSYWTVVSETAKTE 463
L EN+IG+ HDH+ TY LD+DIDG +NS +K N+ + +PRKSY V + AKTE
Sbjct: 510 LSENIIGVIHDHYVTYYLDMDIDGSDNSFVKVNIKKQETSPGESPRKSYLKAVRKVAKTE 569
Query: 464 SEAKIQLGM-EPAELVIVNPNKKTKPGNSHGYRLIPDHAAHPLLLEDDYPQVRGAFTKYN 522
+A+I+L + P+E +VNP+KKT+ GN GY+L+P A LL DD PQ R AFT
Sbjct: 570 KDAQIKLQLYNPSEFHMVNPSKKTRVGNPVGYKLVPGATAASLLDHDDPPQKRAAFTNNQ 629
Query: 523 VWVTAYNKSEKWAGGKYVDQSHGEDTLAVWSSMNREIENKDIVLWCVLGIHHLPCQEDLP 582
+WVT YNKSE+WAGG V QS G+DTL VWS +R IENKDIVLW +G HH+PCQED P
Sbjct: 630 IWVTPYNKSEEWAGGLLVYQSQGDDTLQVWSDRDRPIENKDIVLWYTVGFHHVPCQEDYP 689
Query: 583 VMPTLSSGFELRPTNFFERSLVLKVIPPKPVTSPNCSANHA 623
+MPT+SS F+L+P NFFER+ +L++ P P C A +
Sbjct: 690 IMPTVSSSFDLKPVNFFERNPILRMPPNFQDDLPVCKAQDS 730
>IMGA|AC229702_7.1 Copper amine oxidase; ; ; AC229702.6 83591-79089
E EGN_Mt090430 20090702
Length = 644
Score = 424 bits (1089), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/371 (55%), Positives = 248/371 (66%), Gaps = 38/371 (10%)
Query: 236 DKGKHRSVLYRGHISELFVPYQDPTEEYYFKTFFDCGEFGFGQSSVSLVPLADCPNNAVF 295
+K K R VLY+G+ISELFVPYQDPTEE+YFKTFFD GE+GFG+S+VSL+P DCP ++ F
Sbjct: 290 EKHKSRRVLYKGYISELFVPYQDPTEEFYFKTFFDAGEYGFGRSTVSLIPNRDCPPHSHF 349
Query: 296 MDGYYAGQDGKPVKVPNVFCIFERHSGDIMWRHTELGIPGEVIIESSPEVSLVVRMVAAI 355
+D Y DG P + N C+FE++ G IMWRHTE IP E I ES EV+L+VR V +
Sbjct: 350 IDTYIHSVDGTPSLLKNAICVFEQY-GSIMWRHTETSIPNEFIEESRTEVNLIVRTVVTV 408
Query: 356 GNYDHTLDWELKPSGSIHVKVGLSGILEVKATAYTHSDEVKEEIYGTFLGENMIGLYHDH 415
GNYD+ LDWE K SGSI + LSGILE+KAT H+DE+K E+YG + N IG+YHDH
Sbjct: 409 GNYDNVLDWEFKTSGSIKPSIALSGILEIKATNIKHNDEIKGELYGKLVSANSIGIYHDH 468
Query: 416 FFTYRLDLDIDGVENSLIKKNLVTKTVMENSTPRKSYWTVVSETAKTESEAKIQLGMEPA 475
F+ Y LD DIDG ENS K NL T + + S+ RK
Sbjct: 469 FYIYYLDFDIDGAENSFEKTNLKTVRITDGSSKRKI------------------------ 504
Query: 476 ELVIVNPNKKTKPGNSHGYRLIPDHAAHPLLLEDDYPQVRGAFTKYNVWVTAYNKSEKWA 535
GN GYRLIP AH LL EDDYPQ+RGAFT YNVWVT YN++EKWA
Sbjct: 505 -------------GNHIGYRLIPAIPAHSLLTEDDYPQIRGAFTNYNVWVTPYNRTEKWA 551
Query: 536 GGKYVDQSHGEDTLAVWSSMNREIENKDIVLWCVLGIHHLPCQEDLPVMPTLSSGFELRP 595
GG YVD S G+DTLAVW+ NR+I NKDIV+W V+GIHH+P QED P+MP LS+ FELRP
Sbjct: 552 GGLYVDHSRGDDTLAVWTKQNRDIVNKDIVMWHVVGIHHVPTQEDFPIMPLLSTSFELRP 611
Query: 596 TNFFERSLVLK 606
TNF L LK
Sbjct: 612 TNFLRGILSLK 622
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 32/42 (76%)
Query: 3 QHPLDSLSPEELILIKTIINDSLSSSTNALNFHYVGLDEPEK 44
+HPLD L+ EE + ++T++++ +S N + FHY+GLD+P+K
Sbjct: 31 EHPLDPLTKEEFLTVQTLVHNKYHTSKNKVAFHYIGLDDPDK 72
>IMGA|Medtr3g114690.1 Copper amine oxidase; ; ;
chr03_pseudomolecule_IMGAG_V3 29102867-29095885 E
EGN_Mt090430 20090702
Length = 772
Score = 177 bits (450), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/381 (31%), Positives = 178/381 (46%), Gaps = 23/381 (6%)
Query: 240 HRSVLYRGHISELFVPYQDPTEEYYFKTFFDCGEFGFGQSSVSLVPLADCPNNAVFMDGY 299
R V +R E+ VPY DPTE +Y K FD GE G G+++ SL DC + D +
Sbjct: 375 RRPVAHRLSFVEMVVPYGDPTEPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGYIKYFDAH 434
Query: 300 YAGQDGKPVKVPNVFCIFERHSGDIMWRHTELGIPGEVIIESSPEVSLVVRMVAAIGNYD 359
+ G + N C+ E G I+W+H + + E L V V + NY+
Sbjct: 435 FTNFTGGVETIENCVCLHEEDHG-ILWKHQDWRT---GLAEVRRSRRLSVSFVCTVANYE 490
Query: 360 HTLDW---ELKPSGSIHVKVGLSGILEVKATAYTHSDEVKEEIYGTFLGENMIGLYHDHF 416
+ W + G I +V L+GIL + A EV++ YGT + + H HF
Sbjct: 491 YAFFWHFYQASRDGKIEAEVKLTGILSLGALM---PGEVRK--YGTMIAPGLYAPVHQHF 545
Query: 417 FTYRLDLDIDG----VENSLIKKNLVTKTVMENSTPRKSYWTVVSETAKTESEAKIQLGM 472
F R+D+ +D N +++ N+ + E + +++ +E SE +
Sbjct: 546 FVARMDMSVDSRPGEALNQVVEVNMKVEEPGEKNIHNNAFY---AEETLLRSELEAMRDC 602
Query: 473 EP---AELVIVNPNKKTKPGNSHGYRLIPDHAAHPLLLEDDYPQVRGAFTKYNVWVTAYN 529
P ++ N + G GY+L+P PL + R AF K+NVWVTAY+
Sbjct: 603 NPLTARHWIVRNTRTGNRTGQLTGYKLVPGSNCLPLAGSEAKFLRRAAFLKHNVWVTAYS 662
Query: 530 KSEKWAGGKYVDQS-HGEDTLAVWSSMNREIENKDIVLWCVLGIHHLPCQEDLPVMPTLS 588
+ E + GG++ +Q+ + LA W NR +E +IVLW V GI H+P ED PVMP
Sbjct: 663 RDEMFPGGEFPNQNPRVGEGLATWIKQNRSLEETNIVLWYVFGITHVPRLEDWPVMPVEH 722
Query: 589 SGFELRPTNFFERSLVLKVIP 609
GF L P FF S + V P
Sbjct: 723 IGFMLMPHGFFNCSPAVDVPP 743
>IMGA|Medtr5g034500.1 Copper amine oxidase; ; ;
chr05_pseudomolecule_IMGAG_V3 14175089-14179469 E
EGN_Mt090430 20090702
Length = 723
Score = 151 bits (382), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 113/383 (29%), Positives = 168/383 (43%), Gaps = 31/383 (8%)
Query: 233 ILSDKGKHRSVLYRGHISELFVPYQDPTEEYYFKTFFDCGEFGFGQSSVSLVPLADCPNN 292
I +G+ R V +R E+ VPY DP + +Y K FD GE G G+++ SL DC
Sbjct: 341 IDGSRGR-RPVAHRLSFVEMVVPYGDPNDPHYRKNAFDAGEDGLGKNAHSLKKGCDCLGY 399
Query: 293 AVFMDGYYAGQDGKPVKVPNVFCIFERHSGDIMWRHTELGIPGEVIIESSPEVSLVVRMV 352
+ D ++ G + N C+ E G I+W+H + EV R+
Sbjct: 400 IKYFDAHFTNFTGGVETIENCVCLHEEDHG-ILWKHQDWRT-------GLAEVRRSRRLT 451
Query: 353 AAIGNYDHTLDWELKPSGSIHVKVGLSGILEVKATAYTHSDEVKEEIYGTFLGENMIGLY 412
+ D G I +V L+GIL + A E ++ YGT + +
Sbjct: 452 VSFICTD----------GKIEAEVKLTGILSLGA---LQPGETRK--YGTTIAPGLYAPV 496
Query: 413 HDHFFTYRLDLDIDGVENSLIKKNLVTKTVM----ENSTPRKSYWTVVSETAKTESEAKI 468
H HFF R+D+ +D + + + +N+ +++ K+E EA
Sbjct: 497 HQHFFVARMDMAVDCKPGEAFNQVVEVDVKVEDPGKNNVHNNAFYA-EERLLKSELEAMR 555
Query: 469 QLG-MEPAELVIVNPNKKTKPGNSHGYRLIPDHAAHPLLLEDDYPQVRGAFTKYNVWVTA 527
+ ++ N + G GYRL+P PL + R AF K+N+WVT
Sbjct: 556 DCNPLSARHWIVRNTRTVNRTGQLTGYRLVPGSNCLPLAGSEAKFLRRAAFLKHNLWVTP 615
Query: 528 YNKSEKWAGGKYVDQS-HGEDTLAVWSSMNREIENKDIVLWCVLGIHHLPCQEDLPVMPT 586
Y +E GG++ +Q+ D LA W NR +E DIVLW V G+ H+P ED PVMP
Sbjct: 616 YVHNEMHPGGEFPNQNPRVGDGLATWVKQNRSLEEADIVLWYVFGVTHIPRLEDWPVMPV 675
Query: 587 LSSGFELRPTNFFERSLVLKVIP 609
GF L P FF S + V P
Sbjct: 676 ERIGFMLMPHGFFNCSPAVDVPP 698