Jatropha Genome Database

JcCA0008021.50
Show Alignment:  
BLASTP 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= JcCA0008021.50 + phase: 0 /pseudo/partial
         (137 letters)

Database: Medicago_aa3.0 
           53,423 sequences; 12,992,982 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

IMGA|Medtr5g021550.1 Glyoxalase/bleomycin resistance protein/dio...    72   1e-13
IMGA|Medtr8g090280.1 Glyoxalase/bleomycin resistance protein/dio...    68   2e-12

>IMGA|Medtr5g021550.1 Glyoxalase/bleomycin resistance
           protein/dioxygenase chr05_pseudomolecule_IMGAG_V3
           8240078-8238554 E EGN_Mt090430 20090702
          Length = 194

 Score = 71.6 bits (174), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 31/51 (60%), Positives = 41/51 (80%), Gaps = 1/51 (1%)

Query: 8   IHLIENPAINEFDIIV-EPRPINPNNNHISLLCKNIGLVKRRLQERGIRYV 57
           IHLI+NP I+EFD  + E RPINP +NHIS  C ++ LVK+RL+E+G+RYV
Sbjct: 63  IHLIQNPDIDEFDTYMNESRPINPKDNHISFQCTDVELVKKRLEEKGMRYV 113


>IMGA|Medtr8g090280.1 Glyoxalase/bleomycin resistance
           protein/dioxygenase chr08_pseudomolecule_IMGAG_V3
           19657018-19655998 F EGN_Mt090430 20090702
          Length = 193

 Score = 67.8 bits (164), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)

Query: 8   IHLIENPAINEFDI-IVEPRPINPNNNHISLLCKNIGLVKRRLQERGIRYV 57
           IHL+ENP  +EFD  + E RPINP +NHIS  C ++GLVK RL++ G++YV
Sbjct: 64  IHLLENPNYDEFDTPMSESRPINPKDNHISFQCTDVGLVKMRLEDMGMKYV 114